GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000550-TA|BGIBMGA000550-PA|undefined
         (1178 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439353-11|CAD27933.1|  615|Anopheles gambiae 30E5.11 protein.        27   3.8  

>AJ439353-11|CAD27933.1|  615|Anopheles gambiae 30E5.11 protein.
          Length = 615

 Score = 26.6 bits (56), Expect = 3.8
 Identities = 14/45 (31%), Positives = 28/45 (62%), Gaps = 3/45 (6%)

Query: 183 YSRDMMCSMLG---LQKQHKQQCIALEDQLVELMILPMEKSEQEN 224
           Y R++  +M+    LQ+Q KQ+ IA E Q +E++   M + ++++
Sbjct: 248 YKRELKETMIRNQQLQRQRKQELIAEEQQSLEVIEGEMRRQQEQD 292


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.323    0.137    0.420 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,248,681
Number of Sequences: 2123
Number of extensions: 53380
Number of successful extensions: 81
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 80
Number of HSP's gapped (non-prelim): 1
length of query: 1178
length of database: 516,269
effective HSP length: 72
effective length of query: 1106
effective length of database: 363,413
effective search space: 401934778
effective search space used: 401934778
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (22.0 bits)
S2: 53 (25.4 bits)