Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000549-TA|BGIBMGA000549-PA|IPR008758|Peptidase S28
(439 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
10_08_0605 + 19158167-19158309,19158726-19158834,19159099-191592... 106 3e-23
10_08_0607 + 19168164-19168358,19168594-19168716,19168791-191689... 89 7e-18
01_06_0837 - 32328191-32328369,32328682-32328731,32328844-323289... 87 3e-17
06_03_0934 - 26073084-26073220,26073296-26073345,26073465-260736... 69 1e-11
11_01_0351 - 2623653-2623795,2623939-2623988,2624086-2624165,262... 37 0.037
06_03_1212 + 28462459-28463283 31 1.8
01_06_0213 + 27580635-27581105,27581206-27581298,27581376-275815... 31 1.8
02_04_0507 + 23546911-23546953,23547011-23547111,23547695-235478... 31 2.4
06_03_1232 - 28583105-28583971 30 4.2
04_01_0221 + 2795975-2796836,2797001-2797517,2797967-2798516 30 4.2
04_04_1263 - 32207636-32207938,32208020-32208170,32208263-322085... 29 7.4
04_04_0306 + 24280773-24280776,24280906-24280929,24281023-242811... 29 7.4
>10_08_0605 +
19158167-19158309,19158726-19158834,19159099-19159224,
19159388-19159543,19159623-19159805,19159904-19160020,
19160528-19160581,19160661-19160732,19160947-19161058,
19161188-19161284,19161434-19161528,19162093-19162167,
19162307-19162390,19162602-19162700,19163167-19163207
Length = 520
Score = 106 bits (255), Expect = 3e-23
Identities = 97/344 (28%), Positives = 151/344 (43%), Gaps = 43/344 (12%)
Query: 79 LSIKNLQFLSSYQALADLANFIS----SMKQKF-RLNEKVKWIAFGGSYPGSLAAWLRLK 133
L+ +NL+FLSS QAL DLA F ++ K+ R W FGGSY G+L+AW RLK
Sbjct: 153 LTTENLRFLSSKQALFDLAVFRQYYQETLNAKYNRSGADSSWFVFGGSYAGALSAWFRLK 212
Query: 134 YPHLIHASISTSGPLLAKVDFKEYYQVVVDALREKTGDDKCVNELRQAHNEISQLIQHSP 193
+PHL S+++SG +L+ ++ ++ + + E G + C L++ + +Q
Sbjct: 213 FPHLTCGSLASSGVVLSVYNYTDFDK----QIGESAGPE-CKAALQETTKLVDGQLQSGR 267
Query: 194 EVIEKEFRVCKPFGLASQNDMKNFYNSIADDFADLVQY-NEDNRISADVNYKNLTINTVC 252
+++ F LA+ D F +AD A QY N D S V K
Sbjct: 268 NAVKQLFGAST---LANDGD---FLFLLADAAAIAFQYGNPDALCSPIVEAKK------- 314
Query: 253 DMLTATGGLPAYKKLAAF-NDIVLAKSNETCMDYSYDNMISDLRNIT--WSSNGARQWMY 309
G + A + D + + Y + L+N T + + R W Y
Sbjct: 315 ------NGTDLVETFARYVKDYYIGTFGASVASYDQEY----LKNTTPPPAESAYRLWWY 364
Query: 310 QTCTEFGFYQTSSAEMXXXXXXXXXXXXIQQCQDVFGQKYNLNFVSNSAAWTNNYYGALK 369
Q C+E ++Q + + C++VFG+ V TN YYG +
Sbjct: 365 QVCSEVAYFQVAPKNDSVRSAKIDTRYHLDLCRNVFGEG-----VYPDVFMTNLYYGGTR 419
Query: 370 IAVGRIVFVHGSIDPW-HALGITETKDNDSPAIFIHGTAHCANM 412
IA +IVF +GS DPW HA +K+ S I HC+++
Sbjct: 420 IAGSKIVFANGSQDPWRHASKQKSSKELPSYLIECSNCGHCSDL 463
>10_08_0607 +
19168164-19168358,19168594-19168716,19168791-19168946,
19169129-19169314,19169467-19169583,19169721-19169774,
19169854-19169925,19170430-19170535,19170658-19170754,
19171090-19171184,19172318-19172420,19172699-19172886,
19174928-19175183,19177187-19177325
Length = 628
Score = 89.0 bits (211), Expect = 7e-18
Identities = 79/299 (26%), Positives = 127/299 (42%), Gaps = 37/299 (12%)
Query: 79 LSIKNLQFLSSYQALADLANFISSMKQ--KFRLNEKV----KWIAFGGSYPGSLAAWLRL 132
L+ +NL+FLSS QAL DL F ++ R N W FG SY G+L+AW RL
Sbjct: 133 LTTENLRFLSSKQALFDLVAFRQHYQEILNARYNRSSGFDNPWFVFGVSYSGALSAWFRL 192
Query: 133 KYPHLIHASISTSGPLLAKVDFKEYYQVVVDALREKTGDDKCVNELRQAHNEISQLIQHS 192
K+PHL S+++SG +LA +F ++ +K D E + A E+++L+
Sbjct: 193 KFPHLTCGSLASSGVVLAVYNFTDF---------DKQVGDSAGPECKAALQEVTRLVDEQ 243
Query: 193 PEVIEKEFRVCKPFGLASQNDMKNFYNSIADDFADLVQYNEDNRISADVNYKNLTINTVC 252
+ + +V FG + +F +AD A QY + + + + IN
Sbjct: 244 LRLDSRSVKVL--FGAEKLKNDGDFLFFLADAAAIGFQYGSPDAVCSPL------INA-- 293
Query: 253 DMLTATGGLPAYKKLAAFNDIVLAKSNETCMDYSYDNMISDLRNITWSSNGARQWMYQTC 312
T + Y + D + + T Y + L+N T +R W +Q C
Sbjct: 294 -KKTGRSLVETYAQYV--QDFFIRRWGTTVSSYDQEY----LKNTTPDDTSSRLWWFQVC 346
Query: 313 TEFGFYQTSSAEMXXXXXXXXXXXXIQQCQDVFGQKYNLNFVSNSAAWTNNYYGALKIA 371
+E ++Q + + C++VFG+ V TN YYG +IA
Sbjct: 347 SEVAYFQVAPKNDSIRSTEINTGYHLDLCRNVFGEG-----VYPDVFMTNLYYGGTRIA 400
Score = 30.7 bits (66), Expect = 2.4
Identities = 13/28 (46%), Positives = 19/28 (67%), Gaps = 1/28 (3%)
Query: 48 QWFKQKLDHSNPSDLRTWKQVCIYQFID 75
+W Q+LDH +P+D R +KQ Y+F D
Sbjct: 53 RWMDQRLDHFSPTDHRQFKQ-RYYEFAD 79
>01_06_0837 -
32328191-32328369,32328682-32328731,32328844-32328923,
32329193-32329345,32329505-32329654,32329877-32330000,
32330086-32330198,32330287-32330420,32330566-32331232
Length = 549
Score = 87.0 bits (206), Expect = 3e-17
Identities = 91/368 (24%), Positives = 161/368 (43%), Gaps = 22/368 (5%)
Query: 75 DKRDLSIKNLQFLSSYQALADLANFISSMKQKFRLNEKVKWIAFGGSYPGSLAAWLRLKY 134
DK + K+L +L++ QALAD A ++ +K+ +E + FGGSY G LAAW+RLKY
Sbjct: 174 DKAYNNSKSLAYLTAEQALADYAVLLTDLKKNLS-SEGSPVVLFGGSYGGMLAAWMRLKY 232
Query: 135 PHLIHASISTSGPLLAKVDFKE---YYQVVV-DALREKTGDDKCVNELRQAHNEISQLIQ 190
PH+ ++++S P+L D +Y +V D RE + + + +A + Q
Sbjct: 233 PHIAVGALASSAPILQFEDVVPSTIFYDLVSNDFKRESLSCFQTIKDSWKALDAQGN-GQ 291
Query: 191 HSPEVIEKEFRVCKPFGLASQNDMKNFYNSIADDFADLVQYNEDNRISADVNYKNLTINT 250
+ K F +CK + + ++ ++ +S A + +V Y + AD L N
Sbjct: 292 DGLLKLSKTFHLCKT--IKNTGELSDWLSS-AYSYLAMVDY----PMPADF-MMPLPGNP 343
Query: 251 VCDMLTATGGLPAYKKLAAFNDIVLAKSNETCMDYSYDNMISDLRNITWSSNGARQWMYQ 310
+ ++ T P + + + A N + Y+Y + D ++ +G W +Q
Sbjct: 344 IKELCTKIDNQPDGTSIL---ERIYAGVN---VYYNYTGTV-DCFDLNDDPHGMDGWDWQ 396
Query: 311 TCTEFGFYQTSSAEMXXXXXXXXXXXXIQQCQDVFGQKYNLNFVSNSAAWTNNYYGALKI 370
CTE + S + + C + FG + +++ +N L+
Sbjct: 397 ACTEMVMPMSYSEDSMFPADKFNYTSYEKDCINSFGVEPRPQWITTEFG-GHNISLVLER 455
Query: 371 AVGRIVFVHGSIDPWHALGITETKDNDSPAIFIHGTAHCANMYPASDNDLAELKQARIEI 430
I+F +G +DPW G+ + AI AH ++ PAS +D L + R
Sbjct: 456 FGSNIIFFNGLLDPWSGGGVLKNISESVVAIIAPLGAHHIDLRPASKDDPDWLVRLRESE 515
Query: 431 EKYLSKWL 438
+S WL
Sbjct: 516 LGIISGWL 523
>06_03_0934 -
26073084-26073220,26073296-26073345,26073465-26073634,
26073651-26073803,26073877-26074032,26074227-26074350,
26075066-26075178,26076336-26076469,26077391-26077578,
26077718-26078139
Length = 548
Score = 68.5 bits (160), Expect = 1e-11
Identities = 66/256 (25%), Positives = 115/256 (44%), Gaps = 19/256 (7%)
Query: 73 FIDKRDLSIKNLQFLSSYQALADLANFISSMKQKFRLNEKVKWIAFGGSYPGSLAAWLRL 132
F ++ + S + L +L+S QALAD A I+S+K + FGGSY G LA+W RL
Sbjct: 153 FGNESNSSPEKLGYLTSTQALADFAVLITSLKHNLSAVSSPV-VVFGGSYGGMLASWFRL 211
Query: 133 KYPHLIHASISTSGPLLAKVDFKEYYQVVVDALRE--KTGDDKCVNELRQAHNEISQLIQ 190
KYPH+ ++++S P+L + D+ + +A+ + K+ C + ++ A + I +
Sbjct: 212 KYPHVTIGAVASSAPIL-QFDYITPWSSFYEAVSQDYKSESFNCFSVIKAAWDLIDERGS 270
Query: 191 HSPEVIE--KEFRVCKPFGLASQNDMKNFYNSIADDFADLVQYNEDNRISADVNYKNLTI 248
+++ K FR CK + + +F N + F + + +N I
Sbjct: 271 TDAGLLQLSKTFRACK-----TVKSVYSFRNWLWTAFVYTAMVDYPTPANFLMNLPAYPI 325
Query: 249 NTVCDMLTATGGLPAYKKLAAFNDIVLAKSNETCMDYSYDNMISDLRNITWSSNGARQWM 308
+C ++ G PA + D A ++ +Y+ D L + +G W
Sbjct: 326 KEMCKII---HGFPAGADIV---DKAFAAAS-LYYNYTGDQTCFQLED-GEDPHGLSGWG 377
Query: 309 YQTCTEFGFYQTSSAE 324
+Q CTE T S E
Sbjct: 378 WQACTEMVMPMTISNE 393
Score = 30.7 bits (66), Expect = 2.4
Identities = 18/72 (25%), Positives = 32/72 (44%)
Query: 368 LKIAVGRIVFVHGSIDPWHALGITETKDNDSPAIFIHGTAHCANMYPASDNDLAELKQAR 427
LK I+F +G DPW G+ + + A+ AH + A+ +D + + R
Sbjct: 466 LKRFGSNIIFSNGMRDPWSRGGVLKNISSSIIALVTEKGAHHLDFRSATKDDPDWVVEQR 525
Query: 428 IEIEKYLSKWLD 439
+ K + W+D
Sbjct: 526 RQEVKIIQGWID 537
>11_01_0351 -
2623653-2623795,2623939-2623988,2624086-2624165,
2624262-2624585,2625164-2625281,2629019-2629062
Length = 252
Score = 36.7 bits (81), Expect = 0.037
Identities = 23/85 (27%), Positives = 40/85 (47%), Gaps = 6/85 (7%)
Query: 360 WTNNYYGA------LKIAVGRIVFVHGSIDPWHALGITETKDNDSPAIFIHGTAHCANMY 413
W +Y+G LK + I+F +G DPW A GI ++ N A+ H ++
Sbjct: 154 WIQSYFGGYDIRNVLKRSGSNIIFFNGLRDPWSAGGILKSISNSIIALVEPKGGHHVDLR 213
Query: 414 PASDNDLAELKQARIEIEKYLSKWL 438
++ D LK+ R + + ++ WL
Sbjct: 214 FSTKEDPEWLKKVRRQEMRIIADWL 238
>06_03_1212 + 28462459-28463283
Length = 274
Score = 31.1 bits (67), Expect = 1.8
Identities = 20/64 (31%), Positives = 32/64 (50%), Gaps = 3/64 (4%)
Query: 124 GSLAAWLRLKYPHL--IHASISTSGPLLAKVDFKEYYQVVVDALREKTGDDKCVNELRQA 181
G L W R +P IHA+I + P +++ +F++ VV L T D+ ELR
Sbjct: 5 GILRRWKRF-FPAFASIHAAIEAAEPGISRKEFRDATDKVVAMLCSATDDEAVAEELRVV 63
Query: 182 HNEI 185
+E+
Sbjct: 64 LDEM 67
>01_06_0213 +
27580635-27581105,27581206-27581298,27581376-27581540,
27581640-27581862,27582329-27582429,27582666-27582713,
27583086-27583172,27583745-27583879,27583985-27584140,
27585336-27585545,27585641-27586351,27586429-27586974,
27587872-27588495,27588595-27588699,27590460-27590711,
27590939-27591766
Length = 1584
Score = 31.1 bits (67), Expect = 1.8
Identities = 13/28 (46%), Positives = 19/28 (67%)
Query: 223 DDFADLVQYNEDNRISADVNYKNLTINT 250
++FA VQYN + + ADVN +N T +T
Sbjct: 826 EEFAGRVQYNSNMNLKADVNQENATEST 853
>02_04_0507 +
23546911-23546953,23547011-23547111,23547695-23547810,
23547897-23547996,23548027-23548215,23548303-23548363,
23548469-23548566,23548943-23549085,23549228-23549311,
23549423-23549512,23549599-23549644
Length = 356
Score = 30.7 bits (66), Expect = 2.4
Identities = 22/70 (31%), Positives = 33/70 (47%), Gaps = 1/70 (1%)
Query: 348 KYNLNFVSNSAAWTNNYYGALKIAVGRIVFVHGSIDPWHALGITE-TKDNDSPAIFIHGT 406
K ++N VSN++ TN K+ R V G + HA+ T+ T D S + G
Sbjct: 162 KSDVNIVSNASCTTNCLAPLAKVINDRFGIVEGLMTTVHAITATQKTVDGPSMKDWRGGR 221
Query: 407 AHCANMYPAS 416
A N+ P+S
Sbjct: 222 AASFNIIPSS 231
>06_03_1232 - 28583105-28583971
Length = 288
Score = 29.9 bits (64), Expect = 4.2
Identities = 19/58 (32%), Positives = 29/58 (50%), Gaps = 3/58 (5%)
Query: 124 GSLAAWLRLKYPHL--IHASISTSGPLLAKVDFKEYYQVVVDALREKTGDDKCVNELR 179
G L W R +P IHA+I + P +++ +F++ VV L T D+ ELR
Sbjct: 5 GVLRRWKRF-FPAFASIHAAIEAAEPGISRREFRDATDKVVAMLCNATDDEAVAEELR 61
>04_01_0221 + 2795975-2796836,2797001-2797517,2797967-2798516
Length = 642
Score = 29.9 bits (64), Expect = 4.2
Identities = 23/98 (23%), Positives = 42/98 (42%), Gaps = 6/98 (6%)
Query: 28 SNGGNLGIPGGDYQSNLPPPQWFKQKLDHSNPSDLRTWKQVCIYQFIDKRDLSIKNLQFL 87
S GG+LG+ + S+ P Q+ + D N TW+Q Q D ++I + F
Sbjct: 140 SGGGSLGLITNNNYSSFGPDQFVSVEFDTYN----NTWEQP--KQTGDHMGININTVTFS 193
Query: 88 SSYQALADLANFISSMKQKFRLNEKVKWIAFGGSYPGS 125
++ +++ + S MK + K + Y G+
Sbjct: 194 TNTTSVSSFSPNESMMKASITFDSKTSMLVASLQYTGN 231
>04_04_1263 - 32207636-32207938,32208020-32208170,32208263-32208500,
32208604-32208814,32208927-32209108,32209196-32209297,
32210002-32211187,32212103-32212499,32212551-32212582,
32212885-32213157,32213307-32213394,32213486-32213723,
32213824-32214034,32214119-32214300,32214378-32214479,
32214801-32216224,32216751-32216822,32217688-32217719,
32218186-32218263,32218425-32218512,32218608-32218845,
32219060-32219162,32219386-32219558,32219644-32219745,
32219825-32220606,32220659-32221012,32224055-32224140,
32224250-32224400,32224534-32224771,32224876-32225119,
32225190-32225368,32225577-32225675,32225835-32227083
Length = 3195
Score = 29.1 bits (62), Expect = 7.4
Identities = 22/65 (33%), Positives = 29/65 (44%), Gaps = 4/65 (6%)
Query: 225 FADLVQYNEDNRISADVNYKNLTINTVCDMLTATGGLPAYKKLAAFNDIVLAKSNETCMD 284
FA L N N + +D L V TATGG AY L ++VL N T +
Sbjct: 1567 FATLAISNSSNLVLSDSGNHTLWTTNV----TATGGDGAYAALLDSGNLVLRLPNGTTIW 1622
Query: 285 YSYDN 289
S+D+
Sbjct: 1623 QSFDH 1627
>04_04_0306 +
24280773-24280776,24280906-24280929,24281023-24281123,
24281359-24281502,24281667-24281782,24281869-24281968,
24282068-24282214,24282329-24282389,24282480-24282577,
24283118-24283260,24283374-24283457,24283538-24283627,
24284018-24284063
Length = 385
Score = 29.1 bits (62), Expect = 7.4
Identities = 21/70 (30%), Positives = 33/70 (47%), Gaps = 1/70 (1%)
Query: 348 KYNLNFVSNSAAWTNNYYGALKIAVGRIVFVHGSIDPWHALGITE-TKDNDSPAIFIHGT 406
K +++ VSN++ TN K+ R V G + HA+ T+ T D S + G
Sbjct: 191 KPDIDIVSNASCTTNCLAPLAKVINDRFGIVEGLMTTVHAITATQKTVDGPSSKDWRGGR 250
Query: 407 AHCANMYPAS 416
A N+ P+S
Sbjct: 251 AASFNIIPSS 260
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.319 0.134 0.411
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,893,178
Number of Sequences: 37544
Number of extensions: 527173
Number of successful extensions: 1202
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 1185
Number of HSP's gapped (non-prelim): 18
length of query: 439
length of database: 14,793,348
effective HSP length: 84
effective length of query: 355
effective length of database: 11,639,652
effective search space: 4132076460
effective search space used: 4132076460
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 61 (28.7 bits)
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