GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000549-TA|BGIBMGA000549-PA|IPR008758|Peptidase S28
         (439 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein.    26   2.3  
AY095933-1|AAM34435.1|  505|Anopheles gambiae cytochrome P450 pr...    25   3.1  
DQ974166-1|ABJ52806.1|  494|Anopheles gambiae serpin 6 protein.        25   4.1  
AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha ...    24   9.4  

>AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein.
          Length = 1036

 Score = 25.8 bits (54), Expect = 2.3
 Identities = 18/53 (33%), Positives = 26/53 (49%), Gaps = 5/53 (9%)

Query: 40  YQSNLPPPQWFKQKLDHSNPS----DLRTWKQVCIYQFIDKRDLSIKNL-QFL 87
           Y++N    +WF +  DHS  S    D +T  Q    Q I   ++ + NL QFL
Sbjct: 85  YRNNERAVRWFSRSFDHSAKSTFEIDNQTVSQQAYLQQIRAFNIQVDNLCQFL 137


>AY095933-1|AAM34435.1|  505|Anopheles gambiae cytochrome P450
           protein.
          Length = 505

 Score = 25.4 bits (53), Expect = 3.1
 Identities = 11/32 (34%), Positives = 20/32 (62%)

Query: 159 QVVVDALREKTGDDKCVNELRQAHNEISQLIQ 190
           ++  DAL+E T  D+ +NE  + +  + QLI+
Sbjct: 350 KITYDALKEMTYLDQVINETLRMYPPVPQLIR 381


>DQ974166-1|ABJ52806.1|  494|Anopheles gambiae serpin 6 protein.
          Length = 494

 Score = 25.0 bits (52), Expect = 4.1
 Identities = 26/113 (23%), Positives = 46/113 (40%), Gaps = 6/113 (5%)

Query: 208 LASQNDMKNFYNSIADDFADLVQYNEDNRISADVNYKNLTINTVCDMLTATGGLPAYKKL 267
           L   ND K   + +  DF   +      + S    +  L+I TV ++L    G   +++ 
Sbjct: 80  LTPDNDAK--ISQLVVDFMMRISRTLPQQQSRTELFSPLSIITVANLLFLGSGGSTHEE- 136

Query: 268 AAFNDIVLAKS-NETCMDYSYDNMISDLRNITWSSNGARQWMYQTCTEFGFYQ 319
             F  ++   S N   M   Y N++++L +     +   QW  QTC     Y+
Sbjct: 137 --FGKVLTPSSMNWKRMHQRYGNVLANLMSPEPIDSRRDQWRRQTCPRDDDYE 187


>AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha 1
           chain protein.
          Length = 1024

 Score = 23.8 bits (49), Expect = 9.4
 Identities = 10/18 (55%), Positives = 11/18 (61%)

Query: 31  GNLGIPGGDYQSNLPPPQ 48
           GN G+PG   Q  LP PQ
Sbjct: 609 GNDGLPGPQGQRGLPGPQ 626


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.319    0.134    0.411 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 464,253
Number of Sequences: 2123
Number of extensions: 18279
Number of successful extensions: 53
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 51
Number of HSP's gapped (non-prelim): 4
length of query: 439
length of database: 516,269
effective HSP length: 66
effective length of query: 373
effective length of database: 376,151
effective search space: 140304323
effective search space used: 140304323
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 49 (23.8 bits)