Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000548-TA|BGIBMGA000548-PA|IPR006968|Protein of unknown
function DUF647
(422 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_29943| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.020
SB_3888| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.76
SB_49764| Best HMM Match : HSA (HMM E-Value=2.2) 31 1.3
SB_11300| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 2.3
SB_18689| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 3.1
SB_15476| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 4.1
SB_9946| Best HMM Match : IQ (HMM E-Value=0.00018) 30 4.1
SB_53581| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 4.1
SB_8742| Best HMM Match : TPR_2 (HMM E-Value=0.00046) 29 5.4
SB_39966| Best HMM Match : CRA_rpt (HMM E-Value=8.6) 29 7.1
SB_55980| Best HMM Match : rve (HMM E-Value=3.8e-23) 29 9.4
SB_577| Best HMM Match : SH3_1 (HMM E-Value=4.6) 29 9.4
SB_26341| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 9.4
SB_4908| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 9.4
>SB_29943| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 154
Score = 37.5 bits (83), Expect = 0.020
Identities = 28/116 (24%), Positives = 53/116 (45%), Gaps = 12/116 (10%)
Query: 204 VLLNEKAMNDDILRAYFHAVLLSVIICVINDVPLPVYQAPNEERPFAQVCRTIQTTDWSR 263
++L+E A + D +++ F A ++ +I PLP Q+P + R A+ + W
Sbjct: 37 IVLHESAESIDFIQSCFQAAVIDHVI----RTPLPPVQSPFKTRTGARAMEALHNF-WWE 91
Query: 264 EPIETHVFNEFKFEPSYDLMKYVNRIVQREWMRIKTGMMRIGWDLNKHLLMVDEWR 319
E ++T + ++DL+ + + G+ R GW ++ L DEWR
Sbjct: 92 ECLQTA-------DLTWDLIAQAHNFTLHTFPDFLAGLERSGWVTSRTHLGPDEWR 140
>SB_3888| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 986
Score = 32.3 bits (70), Expect = 0.76
Identities = 26/97 (26%), Positives = 44/97 (45%), Gaps = 1/97 (1%)
Query: 322 SVKPLSQYAPIEGRVSTKDYVISEADA-KLTKELLMELEHGDGVTYGVVETKPLMHYKKE 380
S K + +E V KDY ++ A K + + E G + K L+ +K+
Sbjct: 126 SQKTSKRVVTMENLVENKDYANRKSPANKKSHKPSAESVKGKSHNDESSKAKKLIKGRKK 185
Query: 381 ASKRRVHDIGTETESPEIEEYREPNTEAEVKAEVPKE 417
K + + ++ IE+ REP TE+ VKA + K+
Sbjct: 186 QLKEQKRESKGAKKTDGIEKAREPKTESPVKAVLDKK 222
>SB_49764| Best HMM Match : HSA (HMM E-Value=2.2)
Length = 342
Score = 31.5 bits (68), Expect = 1.3
Identities = 25/74 (33%), Positives = 40/74 (54%), Gaps = 8/74 (10%)
Query: 344 SEADAKL-TKELLMELEHGDGVTYGVVETKPLMHYKKEASKRRVHDIGTETESPEIEEYR 402
SE +A L T++++ME ++ T G E KP KK+ + ++T+SP +
Sbjct: 114 SETEACLSTRDIVMEDDNAPKQTDGAKEEKPK---KKQKINGKSEFSESKTDSP----VQ 166
Query: 403 EPNTEAEVKAEVPK 416
E TE E KA+VP+
Sbjct: 167 ESVTEVEAKADVPE 180
>SB_11300| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1148
Score = 30.7 bits (66), Expect = 2.3
Identities = 19/65 (29%), Positives = 34/65 (52%), Gaps = 3/65 (4%)
Query: 357 ELEHGDGVTYGVVETKPLMHYKKEASK--RRVHDIGTETESPEIEEYREPNTEAEVKAEV 414
E+E G GV + +P K+++ RR G + ++ ++EE +E T+AE + +
Sbjct: 915 EVEEGAAEPEGVADEQPAEEAKEKSKPAGRRASRRGKK-QATQVEESQEDKTDAEKEKKK 973
Query: 415 PKENR 419
PK R
Sbjct: 974 PKAKR 978
>SB_18689| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 160
Score = 30.3 bits (65), Expect = 3.1
Identities = 17/50 (34%), Positives = 27/50 (54%)
Query: 348 AKLTKELLMELEHGDGVTYGVVETKPLMHYKKEASKRRVHDIGTETESPE 397
AK T + +E +G+ VT V+ +PL+ + +HD T+TES E
Sbjct: 63 AKRTLQRQLETHYGNRVTIISVKQQPLIVTLNNNVNKSIHDAHTKTESWE 112
>SB_15476| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 274
Score = 29.9 bits (64), Expect = 4.1
Identities = 19/63 (30%), Positives = 33/63 (52%), Gaps = 3/63 (4%)
Query: 159 IKMGVSIKDLIKKKYPKASHLKNIKDVY---ENRNYIIIPNVQDRKMYVLLNEKAMNDDI 215
+K+ SI ++KKK KAS +K Y ++ Y +I N ++R V ++D+
Sbjct: 205 VKLPHSIHGILKKKEKKASSCNQLKKSYPLLKSGYYDVIVNGKERMCTVTWTTLKLSDED 264
Query: 216 LRA 218
+RA
Sbjct: 265 IRA 267
>SB_9946| Best HMM Match : IQ (HMM E-Value=0.00018)
Length = 786
Score = 29.9 bits (64), Expect = 4.1
Identities = 19/57 (33%), Positives = 27/57 (47%), Gaps = 2/57 (3%)
Query: 306 WDLNKHLLMVDEWRISSVKPLSQYAPIEGRVSTKDYV--ISEADAKLTKELLMELEH 360
WDLN + V E + VKP + A E S +YV S++ L+ E L + H
Sbjct: 566 WDLNDAAVHVCEAELRVVKPCTNNAGTETSASIDNYVTYCSDSSTALSAEKLRNIIH 622
>SB_53581| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1584
Score = 29.9 bits (64), Expect = 4.1
Identities = 14/36 (38%), Positives = 19/36 (52%)
Query: 383 KRRVHDIGTETESPEIEEYREPNTEAEVKAEVPKEN 418
K +V D TE PE + E E + KA+ PK+N
Sbjct: 1549 KNKVSDKEGSTEEPEDDSEEESEDETDEKADKPKKN 1584
>SB_8742| Best HMM Match : TPR_2 (HMM E-Value=0.00046)
Length = 940
Score = 29.5 bits (63), Expect = 5.4
Identities = 19/54 (35%), Positives = 27/54 (50%), Gaps = 3/54 (5%)
Query: 320 ISSVKPLSQYAPIEGRVSTKDYVISEADAKLTKELLMELEHGDGVTYGVVETKP 373
I VKP S P + R KD +A A+ KEL+ L+ G T +++ KP
Sbjct: 169 IKDVKPASPGKPSKKREKKKDDPAQQAAAQRKKELMATLKQG---TSALLDKKP 219
>SB_39966| Best HMM Match : CRA_rpt (HMM E-Value=8.6)
Length = 159
Score = 29.1 bits (62), Expect = 7.1
Identities = 21/63 (33%), Positives = 26/63 (41%), Gaps = 3/63 (4%)
Query: 362 DGVTYGVVETKPLMHYKKEASKRRVHDIGTETES---PEIEEYREPNTEAEVKAEVPKEN 418
+G T ETK +KE K E E E E+ E EAE + E KE
Sbjct: 16 EGETEKEAETKKEAETEKEEEKETKKKTEKEEEKWKQEETEKEAETEKEAETEKEAEKEK 75
Query: 419 RKK 421
+KK
Sbjct: 76 KKK 78
>SB_55980| Best HMM Match : rve (HMM E-Value=3.8e-23)
Length = 1268
Score = 28.7 bits (61), Expect = 9.4
Identities = 17/84 (20%), Positives = 41/84 (48%), Gaps = 5/84 (5%)
Query: 344 SEADAKLTKELLMELEHGDGVTYGVVETKPLMHY-----KKEASKRRVHDIGTETESPEI 398
++ D ++ + L+ + GD V + + L + +KE + ++V+D+ + + +I
Sbjct: 81 TQEDERILEHLIQTISDGDLVKRAIEKRWNLTEFIENAGQKEENNKQVNDMKEDFKVAKI 140
Query: 399 EEYREPNTEAEVKAEVPKENRKKD 422
+ ++P + + E RKKD
Sbjct: 141 QTQKKPKAKKPPSQQRSGEARKKD 164
>SB_577| Best HMM Match : SH3_1 (HMM E-Value=4.6)
Length = 222
Score = 28.7 bits (61), Expect = 9.4
Identities = 16/56 (28%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
Query: 30 VSRDYSAYQIWDTAQAFCSTITGTLATQEVLRGVGVG--DTTATPLAATVTWVIKD 83
VS D + + + ++ + Q L G+G+G DTTA PL+ +V +K+
Sbjct: 37 VSHDEHEWMVAEMSEHLKANTVSVSTLQIDLEGIGMGFMDTTARPLSVSVFGFVKE 92
>SB_26341| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 329
Score = 28.7 bits (61), Expect = 9.4
Identities = 15/36 (41%), Positives = 20/36 (55%), Gaps = 2/36 (5%)
Query: 212 NDDILRAYFHAVLLSVIICVINDVPLPVYQAPNEER 247
+DDI + H V L + C +NDV LP Q EE+
Sbjct: 85 SDDICQQ--HDVTLDDVKCKVNDVMLPKMQGDTEEK 118
>SB_4908| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1014
Score = 28.7 bits (61), Expect = 9.4
Identities = 28/99 (28%), Positives = 40/99 (40%), Gaps = 6/99 (6%)
Query: 320 ISSVKPLSQYAPIEGRVSTK-DYVISEADAKLTKELLMELEHGDGVTYGVVETKPLMHYK 378
+ S KP+ Q PI V K + I K E ++ E+ G T G +E H K
Sbjct: 688 VVSKKPVKQDKPIANNVKNKGEPEIKVVPEKAKDEPGVKYENKKGRTAGRLE-----HAK 742
Query: 379 KEASKRRVHDIGTETESPEIEEYREPNTEAEVKAEVPKE 417
S+ + D+ + I E E A VKA +E
Sbjct: 743 VHTSENKQKDLSSPLARDRISEMEEMIMGAAVKASRLRE 781
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.320 0.136 0.411
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,341,156
Number of Sequences: 59808
Number of extensions: 600140
Number of successful extensions: 1621
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 12
Number of HSP's that attempted gapping in prelim test: 1618
Number of HSP's gapped (non-prelim): 16
length of query: 422
length of database: 16,821,457
effective HSP length: 84
effective length of query: 338
effective length of database: 11,797,585
effective search space: 3987583730
effective search space used: 3987583730
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 61 (28.7 bits)
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