Silkworm BLAST Result against human

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000548-TA|BGIBMGA000548-PA|IPR006968|Protein of unknown
function DUF647
         (422 letters)

Database: human 
           224,733 sequences; 73,234,838 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK222913-1|BAD96633.1|  468|Homo sapiens hypothetical protein FL...   153   1e-36
AK023930-1|BAB14730.1|  468|Homo sapiens protein ( Homo sapiens ...   153   1e-36
BC009308-1|AAH09308.1|  468|Homo sapiens C16orf58 protein protein.    151   5e-36
BC000822-1|AAH00822.1|  231|Homo sapiens C16orf58 protein protein.     33   2.5  
AK092580-1|BAC03918.1|  206|Homo sapiens protein ( Homo sapiens ...    33   2.5  
AL137287-1|CAB70679.1| 1397|Homo sapiens hypothetical protein pr...    31   7.7  
AF117888-1|AAD49195.1| 2548|Homo sapiens myosin-IXa protein.           31   7.7  

>AK222913-1|BAD96633.1|  468|Homo sapiens hypothetical protein
           FLJ13868 variant protein.
          Length = 468

 Score =  153 bits (371), Expect = 1e-36
 Identities = 71/131 (54%), Positives = 95/131 (72%)

Query: 20  VFLPKGYPDSVSRDYSAYQIWDTAQAFCSTITGTLATQEVLRGVGVGDTTATPLAATVTW 79
           VFLP+G+PDSVS DY  YQ+WD+ QAF S+++G+LATQ VL G+GVG+  AT  AAT TW
Sbjct: 76  VFLPQGFPDSVSPDYLPYQLWDSVQAFASSLSGSLATQAVLLGIGVGNAKATVSAATATW 135

Query: 80  VIKDGCGHLGRILFAFTHGTCLDAYSKKWRLYADILNDAAMCIEIALPYFKNYTTVVLCV 139
           ++KD  G LGRI+FA+  G+ LD  +K+WRL+ADILND AM +EI  P +    T+ +  
Sbjct: 136 LVKDSTGMLGRIVFAWWKGSKLDCNAKQWRLFADILNDVAMFLEIMAPVYPICFTMTVST 195

Query: 140 STVMKAIVGVS 150
           S + K IV V+
Sbjct: 196 SNLAKCIVSVA 206



 Score = 32.7 bits (71), Expect = 2.5
 Identities = 13/41 (31%), Positives = 22/41 (53%)

Query: 279 SYDLMKYVNRIVQREWMRIKTGMMRIGWDLNKHLLMVDEWR 319
           S+ ++K  + ++   + +   G+   GW   KH L VDEWR
Sbjct: 416 SWVVVKETHEVLDMLFPKFLKGLQDAGWKTEKHQLEVDEWR 456


>AK023930-1|BAB14730.1|  468|Homo sapiens protein ( Homo sapiens
           cDNA FLJ13868 fis, clone THYRO1001271. ).
          Length = 468

 Score =  153 bits (371), Expect = 1e-36
 Identities = 71/131 (54%), Positives = 95/131 (72%)

Query: 20  VFLPKGYPDSVSRDYSAYQIWDTAQAFCSTITGTLATQEVLRGVGVGDTTATPLAATVTW 79
           VFLP+G+PDSVS DY  YQ+WD+ QAF S+++G+LATQ VL G+GVG+  AT  AAT TW
Sbjct: 76  VFLPQGFPDSVSPDYLPYQLWDSVQAFASSLSGSLATQAVLLGIGVGNAKATVSAATATW 135

Query: 80  VIKDGCGHLGRILFAFTHGTCLDAYSKKWRLYADILNDAAMCIEIALPYFKNYTTVVLCV 139
           ++KD  G LGRI+FA+  G+ LD  +K+WRL+ADILND AM +EI  P +    T+ +  
Sbjct: 136 LVKDSTGMLGRIVFAWWKGSKLDCNAKQWRLFADILNDVAMFLEIMAPVYPICFTMTVST 195

Query: 140 STVMKAIVGVS 150
           S + K IV V+
Sbjct: 196 SNLAKCIVSVA 206


>BC009308-1|AAH09308.1|  468|Homo sapiens C16orf58 protein protein.
          Length = 468

 Score =  151 bits (366), Expect = 5e-36
 Identities = 71/131 (54%), Positives = 94/131 (71%)

Query: 20  VFLPKGYPDSVSRDYSAYQIWDTAQAFCSTITGTLATQEVLRGVGVGDTTATPLAATVTW 79
           VFLP+G+PDSVS DY  YQ+WD+ QAF S+++G+LATQ VL G+GVG+  AT  AAT TW
Sbjct: 76  VFLPQGFPDSVSPDYLPYQLWDSVQAFASSLSGSLATQAVLLGIGVGNAKATVSAATATW 135

Query: 80  VIKDGCGHLGRILFAFTHGTCLDAYSKKWRLYADILNDAAMCIEIALPYFKNYTTVVLCV 139
           ++KD  G LGRI+FA+  G+ LD  +K+WRL+ADILND AM +EI  P      T+ +  
Sbjct: 136 LVKDSTGMLGRIVFAWWKGSKLDCNAKQWRLFADILNDVAMFLEIMAPVCPICFTMTVST 195

Query: 140 STVMKAIVGVS 150
           S + K IV V+
Sbjct: 196 SNLAKCIVSVA 206



 Score = 32.7 bits (71), Expect = 2.5
 Identities = 13/41 (31%), Positives = 22/41 (53%)

Query: 279 SYDLMKYVNRIVQREWMRIKTGMMRIGWDLNKHLLMVDEWR 319
           S+ ++K  + ++   + +   G+   GW   KH L VDEWR
Sbjct: 416 SWVVVKETHEVLDMLFPKFLKGLQDAGWKTEKHQLEVDEWR 456


>BC000822-1|AAH00822.1|  231|Homo sapiens C16orf58 protein protein.
          Length = 231

 Score = 32.7 bits (71), Expect = 2.5
 Identities = 13/41 (31%), Positives = 22/41 (53%)

Query: 279 SYDLMKYVNRIVQREWMRIKTGMMRIGWDLNKHLLMVDEWR 319
           S+ ++K  + ++   + +   G+   GW   KH L VDEWR
Sbjct: 179 SWVVVKETHEVLDMLFPKFLKGLQDAGWKTEKHQLEVDEWR 219


>AK092580-1|BAC03918.1|  206|Homo sapiens protein ( Homo sapiens
           cDNA FLJ35261 fis, clone PROST2004270. ).
          Length = 206

 Score = 32.7 bits (71), Expect = 2.5
 Identities = 13/41 (31%), Positives = 22/41 (53%)

Query: 279 SYDLMKYVNRIVQREWMRIKTGMMRIGWDLNKHLLMVDEWR 319
           S+ ++K  + ++   + +   G+   GW   KH L VDEWR
Sbjct: 154 SWVVVKETHEVLDMLFPKFLKGLQDAGWKTEKHRLEVDEWR 194


>AL137287-1|CAB70679.1| 1397|Homo sapiens hypothetical protein
           protein.
          Length = 1397

 Score = 31.1 bits (67), Expect = 7.7
 Identities = 22/103 (21%), Positives = 45/103 (43%), Gaps = 4/103 (3%)

Query: 320 ISSVKPLSQYAPIEGRVSTKDYVISEADAKLTKELLMELEHGDGVTYGVVETKPLMHYKK 379
           IS+  P   Y P +  + T     S+ D  + +  L+E E   G    +   +    Y  
Sbjct: 191 ISNSLPTFFYIPQQDPLKTN----SQLDTSIQRNKLLENEDTAGEALTLDINRETRRYHC 246

Query: 380 EASKRRVHDIGTETESPEIEEYREPNTEAEVKAEVPKENRKKD 422
               + V  + TE+ +P +++  + NTE E + +  ++  +K+
Sbjct: 247 SGKDQIVPSLNTESSNPVLKKLEKLNTEKEERQKQLQQQNEKE 289


>AF117888-1|AAD49195.1| 2548|Homo sapiens myosin-IXa protein.
          Length = 2548

 Score = 31.1 bits (67), Expect = 7.7
 Identities = 22/103 (21%), Positives = 45/103 (43%), Gaps = 4/103 (3%)

Query: 320  ISSVKPLSQYAPIEGRVSTKDYVISEADAKLTKELLMELEHGDGVTYGVVETKPLMHYKK 379
            IS+  P   Y P +  + T     S+ D  + +  L+E E   G    +   +    Y  
Sbjct: 1413 ISNSLPTFFYIPQQDPLKTN----SQLDTSIQRNKLLENEDTAGEALTLDINRETRRYHC 1468

Query: 380  EASKRRVHDIGTETESPEIEEYREPNTEAEVKAEVPKENRKKD 422
                + V  + TE+ +P +++  + NTE E + +  ++  +K+
Sbjct: 1469 SGKDQIVPSLNTESSNPVLKKLEKLNTEKEERQKQLQQQNEKE 1511


  Database: human
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 73,234,838
  Number of sequences in database:  224,733
  
Lambda     K      H
   0.320    0.136    0.411 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 61,469,773
Number of Sequences: 224733
Number of extensions: 2556222
Number of successful extensions: 5676
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 5663
Number of HSP's gapped (non-prelim): 15
length of query: 422
length of database: 73,234,838
effective HSP length: 92
effective length of query: 330
effective length of database: 52,559,402
effective search space: 17344602660
effective search space used: 17344602660
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 67 (31.1 bits)