Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000548-TA|BGIBMGA000548-PA|IPR006968|Protein of unknown
function DUF647
(422 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_03_0212 + 12697854-12698549,12698655-12698930,12698991-126990... 103 4e-22
01_01_0271 + 2243496-2243500,2245011-2245061,2245174-2245322,224... 97 2e-20
03_02_0147 - 5923117-5923215,5923882-5924069,5924885-5924977,592... 93 3e-19
01_06_1597 + 38528241-38528588,38529623-38529721,38529814-385299... 88 1e-17
05_04_0340 - 20404703-20404771,20404908-20405093,20405191-204052... 85 1e-16
04_04_0515 - 25829298-25829750,25829822-25829944,25831294-258314... 78 2e-14
02_02_0515 - 11110173-11110199,11110497-11110628,11110790-111108... 32 0.75
02_01_0457 - 3283759-3285240 32 0.99
11_06_0023 - 19325966-19326046,19326132-19326248,19326635-193267... 30 3.0
06_01_1190 + 10231166-10231222,10231318-10234122 30 3.0
03_01_0187 - 1492732-1492935,1493708-1493765,1494871-1494947,149... 30 3.0
01_06_1191 - 35297005-35297473,35297812-35298965 30 3.0
01_01_0375 + 2922994-2923602,2923701-2923772,2923834-2923908 30 4.0
04_04_0076 + 22558105-22558261,22558356-22558405,22559837-225600... 29 5.3
11_06_0313 + 22306497-22308938 29 7.0
06_01_0525 - 3800578-3801018,3801395-3801504,3801608-3801683,380... 29 9.3
01_06_1186 + 35223272-35224723,35225536-35225610,35226245-352265... 29 9.3
>04_03_0212 +
12697854-12698549,12698655-12698930,12698991-12699038,
12699659-12699715,12700965-12701163,12702267-12702373,
12702586-12702759,12702844-12703083,12703638-12703693,
12704499-12704622
Length = 658
Score = 103 bits (246), Expect = 4e-22
Identities = 52/110 (47%), Positives = 66/110 (60%), Gaps = 2/110 (1%)
Query: 20 VFLPKGYPDSVSRDYSAYQIWDTAQAFCSTITGTLATQEVLRGVGVGDTTATPLAATVTW 79
+ LP GYPDSVS DY Y +W Q S I+G L+TQ +L VG+G A P AA V W
Sbjct: 195 LLLPDGYPDSVSSDYLQYSLWRGVQGIASQISGVLSTQALLYAVGLG-KGAIPTAAAVNW 253
Query: 80 VIKDGCGHLGRILFAFTHGTCLDAYSKKWRLYADILNDAAMCIEIALPYF 129
V+KDG G+L +IL + G D K WRL+AD+L + A +EI P F
Sbjct: 254 VLKDGLGYLSKILLS-KFGRHFDVNPKGWRLFADLLENTAYGLEILTPVF 302
Score = 28.7 bits (61), Expect = 9.3
Identities = 15/64 (23%), Positives = 35/64 (54%), Gaps = 6/64 (9%)
Query: 158 QIKMGVSIKDLIKKKYPKASHLKNIKDVYENRNYIIIPNVQDRKMYVLLNEKAMNDDILR 217
++++G + ++I+ K + + D+Y+N Y++ K V+L E + +D+L+
Sbjct: 480 RLQLGSKLSEIIENKEDACA----LFDLYKNEQYLLTE--YKGKFCVILKEGSSPEDMLK 533
Query: 218 AYFH 221
+ FH
Sbjct: 534 SLFH 537
>01_01_0271 +
2243496-2243500,2245011-2245061,2245174-2245322,
2245870-2245970,2246327-2246385,2246763-2246809,
2246952-2247030,2247139-2247211,2247294-2247413,
2247685-2247744,2247881-2247994,2248921-2249016,
2249094-2249333
Length = 397
Score = 97.1 bits (231), Expect = 2e-20
Identities = 51/135 (37%), Positives = 66/135 (48%), Gaps = 3/135 (2%)
Query: 22 LPKGYPDSVSRDYSAYQIWDTAQAFCSTITGTLATQEVLRGVGVGDTTATPLAAT---VT 78
LP G+P SVS DY Y +W I TL T +L+ VGVG T T AA+ +
Sbjct: 63 LPAGFPGSVSDDYLEYMLWQLPTNVTGWICHTLVTSTLLKAVGVGSFTGTSAAASAAAIR 122
Query: 79 WVIKDGCGHLGRILFAFTHGTCLDAYSKKWRLYADILNDAAMCIEIALPYFKNYTTVVLC 138
WV KDG G GR+L GT D KKWR+YAD + A E+ P + Y +
Sbjct: 123 WVSKDGIGAFGRLLIGGRFGTLFDDDPKKWRMYADFIGSAGSIFELITPLYPGYFLPLAS 182
Query: 139 VSTVMKAIVGVSDLK 153
+ + K I+ LK
Sbjct: 183 LGNLAKKIIDSGLLK 197
>03_02_0147 -
5923117-5923215,5923882-5924069,5924885-5924977,
5925499-5925628,5925720-5925802,5925893-5925976,
5926253-5926316,5926375-5926515,5926801-5926863,
5926968-5927006,5927126-5927185,5927567-5927624,
5927708-5928099
Length = 497
Score = 93.5 bits (222), Expect = 3e-19
Identities = 53/158 (33%), Positives = 83/158 (52%), Gaps = 28/158 (17%)
Query: 21 FLPKGYPDSVSRDYSAYQIWDTAQAFCSTITGTLATQEVLRGVGVGDTTATPLAATVTWV 80
F+P+G+P SV+ DY +Q+WDT Q + I L+TQ +L +GVG+ +AT + AT W
Sbjct: 147 FVPEGFPGSVTPDYVPFQMWDTLQGLSTYIRAMLSTQALLGAIGVGEKSATVIGATFQWF 206
Query: 81 IKDGCGHLGRILFAF------------------------THGTCL----DAYSKKWRLYA 112
++D G LG ILF F TCL D+ +K WRL A
Sbjct: 207 LRDLTGMLGGILFTFYQVSNSLANSNRQCHLIAIDSLFTDEITCLGSNLDSNAKMWRLVA 266
Query: 113 DILNDAAMCIEIALPYFKNYTTVVLCVSTVMKAIVGVS 150
D +ND M +++ P F + V++C+ ++ ++ GV+
Sbjct: 267 DFMNDLGMLMDLLSPLFPSSLIVIMCLGSLSRSFTGVA 304
>01_06_1597 +
38528241-38528588,38529623-38529721,38529814-38529927,
38530349-38530420,38530520-38530630,38530738-38530857,
38531541-38531613,38531997-38532077,38532167-38532231,
38532383-38532484,38532571-38532744,38532873-38532938
Length = 474
Score = 87.8 bits (208), Expect = 1e-17
Identities = 43/129 (33%), Positives = 68/129 (52%), Gaps = 1/129 (0%)
Query: 22 LPKGYPDSVSRDYSAYQIWDTAQAFCSTITGTLATQEVLRGVGVGDTTATPLAATVTWVI 81
+P+G+PDSV+ Y Y W + F G T+ +L VGV + TP A + W++
Sbjct: 127 VPEGFPDSVTPSYVPYMTWRALKHFFGGAMGVFTTRTLLSSVGVSQSKVTPGAIAINWIL 186
Query: 82 KDGCGHLGRILFAFTHGTCLDAYSKKWRLYADILNDAAMCIEIALPYFKNYTTVVLCVST 141
KDG G +G++LFA G D K+ R +D+L + IE+A F + + CV+
Sbjct: 187 KDGAGRVGKMLFA-RQGKKFDYDLKQLRFSSDLLLEIGAGIELATAAFPQFFLPMACVAN 245
Query: 142 VMKAIVGVS 150
V+K + V+
Sbjct: 246 VVKNVAAVT 254
Score = 41.9 bits (94), Expect = 0.001
Identities = 22/67 (32%), Positives = 39/67 (58%), Gaps = 1/67 (1%)
Query: 163 VSIKDLIKKKYPKASHLKNIKDVYENRNYIIIPNVQDRKMYVLLNEKAMNDDILRAYFHA 222
V+I + + + + I+ ++E+ Y++ N K+Y LL ++A +DDI++A FHA
Sbjct: 337 VAIGSRFGEAFQEPASFVAIRPLFEDERYMVTYNPAKDKVYALLKDQAKSDDIIKAAFHA 396
Query: 223 -VLLSVI 228
VLL I
Sbjct: 397 HVLLHFI 403
>05_04_0340 -
20404703-20404771,20404908-20405093,20405191-20405292,
20405400-20405464,20405551-20405631,20405983-20406055,
20406147-20406248,20406437-20406556,20406690-20406800,
20406889-20406960,20407228-20407341,20407423-20407521,
20408472-20408849
Length = 523
Score = 85.0 bits (201), Expect = 1e-16
Identities = 42/129 (32%), Positives = 66/129 (51%), Gaps = 1/129 (0%)
Query: 22 LPKGYPDSVSRDYSAYQIWDTAQAFCSTITGTLATQEVLRGVGVGDTTATPLAATVTWVI 81
+P+G+PDSV+ Y Y W + F G T+ +L VGV + AT A + W++
Sbjct: 137 VPEGFPDSVTPSYVPYMTWRALKHFFGGAMGVFTTRTLLNSVGVAQSRATSGAVAINWIL 196
Query: 82 KDGCGHLGRILFAFTHGTCLDAYSKKWRLYADILNDAAMCIEIALPYFKNYTTVVLCVST 141
KDG G +G++LFA G D K+ R D+L + IE+A F + C++
Sbjct: 197 KDGAGRVGKMLFA-RQGKKFDYDLKQLRFSGDLLMELGAGIELATAAFPQLFLPMACIAN 255
Query: 142 VMKAIVGVS 150
V+K + V+
Sbjct: 256 VVKNVAAVT 264
Score = 42.7 bits (96), Expect = 5e-04
Identities = 24/67 (35%), Positives = 38/67 (56%), Gaps = 1/67 (1%)
Query: 163 VSIKDLIKKKYPKASHLKNIKDVYENRNYIIIPNVQDRKMYVLLNEKAMNDDILRAYFHA 222
V+I + + + + I+ ++E+ YI+ N K+Y LL ++A DDIL+A FHA
Sbjct: 381 VAIGSRFGEAFQEPASFVAIRPLFEDERYIVTYNPTKDKVYALLKDQAKPDDILKAAFHA 440
Query: 223 -VLLSVI 228
VLL I
Sbjct: 441 HVLLHFI 447
>04_04_0515 -
25829298-25829750,25829822-25829944,25831294-25831473,
25831687-25831784,25831914-25832007,25832090-25832149,
25832350-25832434,25832513-25832562
Length = 380
Score = 77.8 bits (183), Expect = 2e-14
Identities = 40/111 (36%), Positives = 59/111 (53%), Gaps = 3/111 (2%)
Query: 17 FTNVFLPKGYPDSVSRDYSAYQIWDTAQAFCSTITGTLATQEVLRGVGVGDTTATPLAAT 76
F N F P GYP SV+ Y Y + Q F S + L+TQ +L G+ T A A
Sbjct: 5 FLNKFFPSGYPYSVNEGYLTYTKFRALQHFSSAMLHVLSTQSLLFAAGLRPTPAQ--ATA 62
Query: 77 VTWVIKDGCGHLGRILFAFTHGTCLDAYSKKWRLYADILNDAAMCIEIALP 127
V+W++KDG H G+++ + G +D+ K WR+ AD+L D +E+ P
Sbjct: 63 VSWILKDGMQHAGKLICS-GMGARMDSEPKSWRILADVLYDFGTALEVISP 112
>02_02_0515 -
11110173-11110199,11110497-11110628,11110790-11110891,
11110970-11111150,11112149-11112276
Length = 189
Score = 32.3 bits (70), Expect = 0.75
Identities = 20/67 (29%), Positives = 39/67 (58%), Gaps = 5/67 (7%)
Query: 159 IKMGVSIKDLIKKKYPKASHLKNIKDVYENRNYIIIPNVQ-DRK-MYVLLNEKAMNDDIL 216
+K+ + ++L KK+ P +++ KD N+ + I V+ +RK M VL+ + +NDD++
Sbjct: 49 LKICTTFEELTKKEDPFITYINKTKD---NKVMVHIEEVKVNRKSMKVLIEPEYLNDDVM 105
Query: 217 RAYFHAV 223
AY +
Sbjct: 106 DAYIQCL 112
>02_01_0457 - 3283759-3285240
Length = 493
Score = 31.9 bits (69), Expect = 0.99
Identities = 16/73 (21%), Positives = 38/73 (52%), Gaps = 3/73 (4%)
Query: 158 QIKMGVSIKDLIKKKYPKASHLKNIKDVYENRNYIIIPNVQDRKMYVLLNEKAMNDDILR 217
QIK +SI L+K +P L + +++ Y ++ + +++ +++ ++D+ R
Sbjct: 56 QIKREISIMRLVK--HPNILQLFEVM-ASKSKIYFVLEYAKGGELFKKISKGKFSEDVAR 112
Query: 218 AYFHAVLLSVIIC 230
YFH ++ + C
Sbjct: 113 RYFHQLISGIDYC 125
>11_06_0023 -
19325966-19326046,19326132-19326248,19326635-19326703,
19326922-19327119,19327388-19327591,19327688-19327828,
19328416-19328625,19329330-19329944
Length = 544
Score = 30.3 bits (65), Expect = 3.0
Identities = 17/61 (27%), Positives = 29/61 (47%)
Query: 349 KLTKELLMELEHGDGVTYGVVETKPLMHYKKEASKRRVHDIGTETESPEIEEYREPNTEA 408
K+ KE+L+EL G V+E K L+ A+ + D ++E+YR T+
Sbjct: 452 KIGKEILIELIAKGGTVKSVIEEKDLVQIADPAAIEAMVDQVLADNPKQLEQYRSGKTKL 511
Query: 409 E 409
+
Sbjct: 512 Q 512
>06_01_1190 + 10231166-10231222,10231318-10234122
Length = 953
Score = 30.3 bits (65), Expect = 3.0
Identities = 21/58 (36%), Positives = 25/58 (43%), Gaps = 1/58 (1%)
Query: 361 GDGVTYGVVETKPLMHYKKEASKRRVHDIGTETESPEIE-EYREPNTEAEVKAEVPKE 417
G G G V T P S RR HD+G E E IE + +P +AE V E
Sbjct: 863 GLGQLEGEVNTHPNRPVLLMYSDRRYHDLGAEAEGSSIEVQTADPVPDAEGSVTVAVE 920
>03_01_0187 -
1492732-1492935,1493708-1493765,1494871-1494947,
1495086-1495160,1495259-1495315,1495451-1495567,
1495805-1495915,1496029-1496151,1496304-1496393,
1496480-1496605,1496687-1496740,1496975-1497055,
1497147-1497254,1497443-1497514,1497626-1497688,
1498417-1498629
Length = 542
Score = 30.3 bits (65), Expect = 3.0
Identities = 19/74 (25%), Positives = 38/74 (51%), Gaps = 4/74 (5%)
Query: 158 QIKMGVSIKDLIKKKYPKASHLKNIKDVYENRNYIIIPNVQDRKMY-VLLNEKAMNDDIL 216
QIK +S LIK +P L + +++ Y+++ V +++ ++N + +D
Sbjct: 71 QIKREISTMKLIK--HPNVVQLHEVM-ASKSKIYMVLEYVDGGELFDKIVNSGRLGEDEA 127
Query: 217 RAYFHAVLLSVIIC 230
R YFH ++ +V C
Sbjct: 128 RRYFHQLINAVDYC 141
>01_06_1191 - 35297005-35297473,35297812-35298965
Length = 540
Score = 30.3 bits (65), Expect = 3.0
Identities = 16/54 (29%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Query: 364 VTYGVVETKPLMHYKKEASKRRVHDIGTETESPEIEEYREPNTEAEVKAEVPKE 417
+ G+ + L ++ + R+HD+GT+ ES +E + A+ AEV KE
Sbjct: 250 IPVGLKIRETLTKIRETQRENRIHDLGTD-ESESVESVVVIDVAADANAEVAKE 302
>01_01_0375 + 2922994-2923602,2923701-2923772,2923834-2923908
Length = 251
Score = 29.9 bits (64), Expect = 4.0
Identities = 14/43 (32%), Positives = 27/43 (62%)
Query: 151 DLKLCGFQIKMGVSIKDLIKKKYPKASHLKNIKDVYENRNYII 193
++ L + K ++ L+KKK+ +ASHL+N K Y+ + +I+
Sbjct: 206 EILLASLRTKTVLTDVFLLKKKFYQASHLRNWKVPYKLQTFIV 248
>04_04_0076 +
22558105-22558261,22558356-22558405,22559837-22560044,
22560112-22560237,22560469-22560567,22560729-22561405,
22561483-22561731,22561808-22561936,22562021-22562089,
22562183-22562256,22563086-22563098,22563361-22563468,
22563541-22563651,22563725-22563811,22564043-22564068,
22564840-22564906,22565123-22565212,22565295-22565387,
22565515-22565604,22565699-22565761,22566349-22566447
Length = 894
Score = 29.5 bits (63), Expect = 5.3
Identities = 29/123 (23%), Positives = 55/123 (44%), Gaps = 13/123 (10%)
Query: 307 DLNKHLLMVDEWRISSVKPLSQYAPIEGRV-------STKDYVISEADAKLTKELLMELE 359
+L KH+L + E+ +SS+K Y E ++ KD +S +L ++E
Sbjct: 741 ELLKHILQIQEYSVSSIKRRDPYIRKEHQLQLVSPETKRKDVNLSGIIQSPITNMLRKVE 800
Query: 360 HGDGVTYGVVETKPLMH--YKKEASKRRVHDIGTETESPEIEEYREPNTEAEVKAEVPKE 417
G T + + + + H Y+ E + R+ +T+S + +EPNT+ + K+
Sbjct: 801 KG---TQDIPKHRKVTHHEYEVETANGRITK-RRKTKSTVMFGVQEPNTQKSLHDTADKD 856
Query: 418 NRK 420
K
Sbjct: 857 PTK 859
>11_06_0313 + 22306497-22308938
Length = 813
Score = 29.1 bits (62), Expect = 7.0
Identities = 14/45 (31%), Positives = 25/45 (55%), Gaps = 2/45 (4%)
Query: 378 KKEASKRRVHDIGTETESPEIE-EYREPNTEAEVKAEVPKENRKK 421
+K RRV D G +T +P I+ +Y EP + +P++ ++K
Sbjct: 208 RKRGRPRRVQD-GADTSAPPIQSKYNEPVLQTPSAVTLPEDGKRK 251
>06_01_0525 -
3800578-3801018,3801395-3801504,3801608-3801683,
3801757-3801909,3802088-3802159,3802242-3802322,
3802936-3803001,3803117-3803182,3803277-3803327,
3803429-3803512,3803988-3804088,3804188-3804329,
3804820-3804917,3805194-3805263,3805409-3805477
Length = 559
Score = 28.7 bits (61), Expect = 9.3
Identities = 17/43 (39%), Positives = 20/43 (46%), Gaps = 1/43 (2%)
Query: 375 MHYKKEASKRRVHDIGTETESPEIEEYREPNTEAEVKAEVPKE 417
+ YKKEA + PE E+ EP E VK E PKE
Sbjct: 304 IEYKKEAEEEEKPASPPPAPEPEPEQEPEPEPE-PVKEEAPKE 345
>01_06_1186 +
35223272-35224723,35225536-35225610,35226245-35226585,
35226621-35227005,35227131-35227559
Length = 893
Score = 28.7 bits (61), Expect = 9.3
Identities = 18/74 (24%), Positives = 38/74 (51%), Gaps = 4/74 (5%)
Query: 158 QIKMGVSIKDLIKKKYPKASHLKNIKDVYENRNYIIIPNVQDRKMY-VLLNEKAMNDDIL 216
QIK +SI L+K +P L + +++ Y ++ + +++ + E +++D
Sbjct: 55 QIKREISIMRLVK--HPNVLQLFEVM-ASKSKIYFVLEYAKGGELFNKIAKEGKLSEDSA 111
Query: 217 RAYFHAVLLSVIIC 230
R YFH ++ +V C
Sbjct: 112 RRYFHQLINAVDYC 125
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.320 0.136 0.411
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,056,633
Number of Sequences: 37544
Number of extensions: 496190
Number of successful extensions: 1114
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 1094
Number of HSP's gapped (non-prelim): 22
length of query: 422
length of database: 14,793,348
effective HSP length: 84
effective length of query: 338
effective length of database: 11,639,652
effective search space: 3934202376
effective search space used: 3934202376
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 61 (28.7 bits)
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