GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000547-TA|BGIBMGA000547-PA|IPR000832|GPCR, family 2,
secretin-like, IPR003287|Calcitonin receptor-related
         (75 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory recept...    21   1.4  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    21   1.4  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    19   5.7  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    19   5.7  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    19   5.7  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    19   5.7  
AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory recept...    19   7.6  
AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory recept...    19   7.6  
AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory recept...    19   7.6  

>AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory receptor
           candidate 52 protein.
          Length = 360

 Score = 21.0 bits (42), Expect = 1.4
 Identities = 8/25 (32%), Positives = 17/25 (68%), Gaps = 1/25 (4%)

Query: 38  FISFILNNIMWIVWYKT-VVDYIEV 61
           ++S+I  NIM + +YK   ++Y ++
Sbjct: 131 YMSYIFANIMGLEFYKQFAIEYFQM 155


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 21.0 bits (42), Expect = 1.4
 Identities = 8/25 (32%), Positives = 17/25 (68%), Gaps = 1/25 (4%)

Query: 38  FISFILNNIMWIVWYKT-VVDYIEV 61
           ++S+I  NIM + +YK   ++Y ++
Sbjct: 131 YMSYIFANIMGLEFYKQFAIEYFQM 155


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 19.0 bits (37), Expect = 5.7
 Identities = 8/19 (42%), Positives = 10/19 (52%)

Query: 56  VDYIEVVQENTVIRNFDAD 74
           VD   V+ ENT +   D D
Sbjct: 719 VDRKAVIAENTYLLTLDGD 737


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 19.0 bits (37), Expect = 5.7
 Identities = 8/19 (42%), Positives = 10/19 (52%)

Query: 56  VDYIEVVQENTVIRNFDAD 74
           VD   V+ ENT +   D D
Sbjct: 719 VDRKAVIAENTYLLTLDGD 737


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 19.0 bits (37), Expect = 5.7
 Identities = 8/19 (42%), Positives = 10/19 (52%)

Query: 56  VDYIEVVQENTVIRNFDAD 74
           VD   V+ ENT +   D D
Sbjct: 719 VDRKAVIAENTYLLTLDGD 737


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 19.0 bits (37), Expect = 5.7
 Identities = 8/19 (42%), Positives = 10/19 (52%)

Query: 56  VDYIEVVQENTVIRNFDAD 74
           VD   V+ ENT +   D D
Sbjct: 719 VDRKAVIAENTYLLTLDGD 737


>AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory receptor
           candidate 20 protein.
          Length = 393

 Score = 18.6 bits (36), Expect = 7.6
 Identities = 6/13 (46%), Positives = 9/13 (69%)

Query: 38  FISFILNNIMWIV 50
           ++ FIL  + WIV
Sbjct: 298 YLPFILLQVAWIV 310


>AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory receptor
           candidate 15 protein.
          Length = 455

 Score = 18.6 bits (36), Expect = 7.6
 Identities = 7/17 (41%), Positives = 9/17 (52%)

Query: 34  HANLFISFILNNIMWIV 50
           H    + F+LN   WIV
Sbjct: 122 HLLFLVIFVLNIWCWIV 138


>AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory receptor
           candidate 1 protein.
          Length = 373

 Score = 18.6 bits (36), Expect = 7.6
 Identities = 5/18 (27%), Positives = 13/18 (72%)

Query: 25  HFQYKRTRIHANLFISFI 42
           +++ +RTR   +LF+ ++
Sbjct: 124 NYENQRTRSRIHLFVRYV 141


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.335    0.147    0.480 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,608
Number of Sequences: 317
Number of extensions: 468
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of query: 75
length of database: 114,650
effective HSP length: 45
effective length of query: 30
effective length of database: 100,385
effective search space:  3011550
effective search space used:  3011550
T: 11
A: 40
X1: 15 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 36 (20.2 bits)
S2: 36 (18.6 bits)