Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000547-TA|BGIBMGA000547-PA|IPR000832|GPCR, family 2,
secretin-like, IPR003287|Calcitonin receptor-related
(75 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF106575-16|AAC78161.2| 334|Caenorhabditis elegans Serpentine r... 33 0.018
AC006673-7|AAF39925.2| 332|Caenorhabditis elegans Serpentine re... 33 0.018
AF099925-4|AAR12970.2| 273|Caenorhabditis elegans Hypothetical ... 28 0.91
AJ010646-1|CAA09303.1| 1237|Caenorhabditis elegans calcium ATPas... 27 2.1
AC025724-13|AAK68551.1| 1234|Caenorhabditis elegans Membrane cal... 27 2.1
AC025724-12|AAK68550.1| 1160|Caenorhabditis elegans Membrane cal... 27 2.1
AC025724-11|AAM97979.1| 1137|Caenorhabditis elegans Membrane cal... 27 2.1
U39848-1|AAT81210.1| 1338|Caenorhabditis elegans Latrophilin rec... 26 2.8
AY314772-1|AAQ84879.1| 1338|Caenorhabditis elegans latrophilin-l... 26 2.8
AJ010708-1|CAA09308.1| 1158|Caenorhabditis elegans calcium ATPas... 26 2.8
AF125446-4|AAD12806.2| 1158|Caenorhabditis elegans Hypothetical ... 26 2.8
Z75550-10|CAE54924.1| 1291|Caenorhabditis elegans Hypothetical p... 25 4.9
Z75550-9|CAA99926.1| 1307|Caenorhabditis elegans Hypothetical pr... 25 4.9
AY314779-1|AAQ84886.1| 454|Caenorhabditis elegans secretin rece... 25 4.9
AL031620-2|CAA20927.2| 454|Caenorhabditis elegans Hypothetical ... 25 4.9
AF099925-8|AAR12969.2| 119|Caenorhabditis elegans Hypothetical ... 25 4.9
Z50859-7|CAH04735.1| 574|Caenorhabditis elegans Hypothetical pr... 25 8.5
Z50859-4|CAA90730.1| 538|Caenorhabditis elegans Hypothetical pr... 25 8.5
Z50859-3|CAA90728.1| 632|Caenorhabditis elegans Hypothetical pr... 25 8.5
AF106575-17|AAD56300.2| 333|Caenorhabditis elegans Serpentine r... 25 8.5
AF022984-1|AAB69953.1| 540|Caenorhabditis elegans Hypothetical ... 25 8.5
AC025726-32|AAY43988.1| 230|Caenorhabditis elegans Hypothetical... 25 8.5
>AF106575-16|AAC78161.2| 334|Caenorhabditis elegans Serpentine
receptor, class h protein3 protein.
Length = 334
Score = 33.5 bits (73), Expect = 0.018
Identities = 14/43 (32%), Positives = 26/43 (60%)
Query: 24 RHFQYKRTRIHANLFISFILNNIMWIVWYKTVVDYIEVVQENT 66
+HF R + A++F F+L+ +M ++W T+V + V+ NT
Sbjct: 42 KHFSKYRNLLMAHIFSGFLLDIVMGVLWKVTIVLPVPVMCSNT 84
>AC006673-7|AAF39925.2| 332|Caenorhabditis elegans Serpentine
receptor, class h protein4 protein.
Length = 332
Score = 33.5 bits (73), Expect = 0.018
Identities = 13/48 (27%), Positives = 28/48 (58%)
Query: 24 RHFQYKRTRIHANLFISFILNNIMWIVWYKTVVDYIEVVQENTVIRNF 71
+HF R + +++F F+L+ +M ++W T+V + ++ NT I +
Sbjct: 42 KHFSKYRNYLISHIFSGFLLDIVMGVLWKVTIVLPVPIMCSNTFISEY 89
>AF099925-4|AAR12970.2| 273|Caenorhabditis elegans Hypothetical
protein K01A2.4 protein.
Length = 273
Score = 27.9 bits (59), Expect = 0.91
Identities = 14/40 (35%), Positives = 20/40 (50%)
Query: 20 FVFLRHFQYKRTRIHANLFISFILNNIMWIVWYKTVVDYI 59
FV++ H +YK + FIS L NI Y+ VV +
Sbjct: 194 FVWMLHGKYKNEKAETEFFISLPLFNIACATIYQFVVQLL 233
>AJ010646-1|CAA09303.1| 1237|Caenorhabditis elegans calcium ATPase
protein.
Length = 1237
Score = 26.6 bits (56), Expect = 2.1
Identities = 12/47 (25%), Positives = 24/47 (51%), Gaps = 3/47 (6%)
Query: 20 FVFLRHF-QYKRTRIHA--NLFISFILNNIMWIVWYKTVVDYIEVVQ 63
FV + F + +IH N+F N I +++W T++ + ++Q
Sbjct: 947 FVMMTLFNEINARKIHGERNIFKGLFSNPIYYVIWIATMISQVVIIQ 993
>AC025724-13|AAK68551.1| 1234|Caenorhabditis elegans Membrane
calcium atpase protein3, isoform b protein.
Length = 1234
Score = 26.6 bits (56), Expect = 2.1
Identities = 12/47 (25%), Positives = 24/47 (51%), Gaps = 3/47 (6%)
Query: 20 FVFLRHF-QYKRTRIHA--NLFISFILNNIMWIVWYKTVVDYIEVVQ 63
FV + F + +IH N+F N I +++W T++ + ++Q
Sbjct: 947 FVMMTLFNEINARKIHGERNIFKGLFSNPIYYVIWIATMISQVVIIQ 993
>AC025724-12|AAK68550.1| 1160|Caenorhabditis elegans Membrane
calcium atpase protein3, isoform a protein.
Length = 1160
Score = 26.6 bits (56), Expect = 2.1
Identities = 12/47 (25%), Positives = 24/47 (51%), Gaps = 3/47 (6%)
Query: 20 FVFLRHF-QYKRTRIHA--NLFISFILNNIMWIVWYKTVVDYIEVVQ 63
FV + F + +IH N+F N I +++W T++ + ++Q
Sbjct: 947 FVMMTLFNEINARKIHGERNIFKGLFSNPIYYVIWIATMISQVVIIQ 993
>AC025724-11|AAM97979.1| 1137|Caenorhabditis elegans Membrane
calcium atpase protein3, isoform c protein.
Length = 1137
Score = 26.6 bits (56), Expect = 2.1
Identities = 12/47 (25%), Positives = 24/47 (51%), Gaps = 3/47 (6%)
Query: 20 FVFLRHF-QYKRTRIHA--NLFISFILNNIMWIVWYKTVVDYIEVVQ 63
FV + F + +IH N+F N I +++W T++ + ++Q
Sbjct: 947 FVMMTLFNEINARKIHGERNIFKGLFSNPIYYVIWIATMISQVVIIQ 993
>U39848-1|AAT81210.1| 1338|Caenorhabditis elegans Latrophilin
receptor protein 2 protein.
Length = 1338
Score = 26.2 bits (55), Expect = 2.8
Identities = 9/31 (29%), Positives = 18/31 (58%)
Query: 20 FVFLRHFQYKRTRIHANLFISFILNNIMWIV 50
F F R+ Q R IH NL + ++ +++++
Sbjct: 919 FTFFRNLQNVRNSIHRNLCLCLLIAELVFVI 949
>AY314772-1|AAQ84879.1| 1338|Caenorhabditis elegans latrophilin-like
protein LAT-2 protein.
Length = 1338
Score = 26.2 bits (55), Expect = 2.8
Identities = 9/31 (29%), Positives = 18/31 (58%)
Query: 20 FVFLRHFQYKRTRIHANLFISFILNNIMWIV 50
F F R+ Q R IH NL + ++ +++++
Sbjct: 919 FTFFRNLQNVRNSIHRNLCLCLLIAELVFVI 949
>AJ010708-1|CAA09308.1| 1158|Caenorhabditis elegans calcium ATPase
protein.
Length = 1158
Score = 26.2 bits (55), Expect = 2.8
Identities = 11/34 (32%), Positives = 19/34 (55%), Gaps = 2/34 (5%)
Query: 32 RIHA--NLFISFILNNIMWIVWYKTVVDYIEVVQ 63
+IH N+F N I ++W T++ +I +VQ
Sbjct: 954 KIHGERNVFKGIFTNPIFCVIWITTLISHILIVQ 987
>AF125446-4|AAD12806.2| 1158|Caenorhabditis elegans Hypothetical
protein R05C11.3 protein.
Length = 1158
Score = 26.2 bits (55), Expect = 2.8
Identities = 11/34 (32%), Positives = 19/34 (55%), Gaps = 2/34 (5%)
Query: 32 RIHA--NLFISFILNNIMWIVWYKTVVDYIEVVQ 63
+IH N+F N I ++W T++ +I +VQ
Sbjct: 954 KIHGERNVFKGIFTNPIFCVIWITTLISHILIVQ 987
>Z75550-10|CAE54924.1| 1291|Caenorhabditis elegans Hypothetical
protein T22C1.10b protein.
Length = 1291
Score = 25.4 bits (53), Expect = 4.9
Identities = 14/47 (29%), Positives = 23/47 (48%)
Query: 21 VFLRHFQYKRTRIHANLFISFILNNIMWIVWYKTVVDYIEVVQENTV 67
VF H+ K+ ANL + + +Y TV++ I V ++N V
Sbjct: 649 VFSEHWSEKQRHCLANLIFGPLFGSFEIDEYYDTVLEKIPVKRKNIV 695
>Z75550-9|CAA99926.1| 1307|Caenorhabditis elegans Hypothetical
protein T22C1.10a protein.
Length = 1307
Score = 25.4 bits (53), Expect = 4.9
Identities = 14/47 (29%), Positives = 23/47 (48%)
Query: 21 VFLRHFQYKRTRIHANLFISFILNNIMWIVWYKTVVDYIEVVQENTV 67
VF H+ K+ ANL + + +Y TV++ I V ++N V
Sbjct: 665 VFSEHWSEKQRHCLANLIFGPLFGSFEIDEYYDTVLEKIPVKRKNIV 711
>AY314779-1|AAQ84886.1| 454|Caenorhabditis elegans secretin
receptor-like proteinSEB-3 protein.
Length = 454
Score = 25.4 bits (53), Expect = 4.9
Identities = 14/47 (29%), Positives = 21/47 (44%), Gaps = 2/47 (4%)
Query: 20 FVFLRHFQYKRTRIHANLFISFILNNIMWIVWYKTVVDYIEVVQENT 66
F Q +R IH NL +F+ + +W T+V V Q+ T
Sbjct: 137 FSIFDSIQCRRLSIHKNLATAFVFRFAVLAIW--TIVQTTNVFQDCT 181
>AL031620-2|CAA20927.2| 454|Caenorhabditis elegans Hypothetical
protein C18B12.2 protein.
Length = 454
Score = 25.4 bits (53), Expect = 4.9
Identities = 14/47 (29%), Positives = 21/47 (44%), Gaps = 2/47 (4%)
Query: 20 FVFLRHFQYKRTRIHANLFISFILNNIMWIVWYKTVVDYIEVVQENT 66
F Q +R IH NL +F+ + +W T+V V Q+ T
Sbjct: 137 FSIFDSIQCRRLSIHKNLATAFVFRFAVLAIW--TIVQTTNVFQDCT 181
>AF099925-8|AAR12969.2| 119|Caenorhabditis elegans Hypothetical
protein K01A2.3 protein.
Length = 119
Score = 25.4 bits (53), Expect = 4.9
Identities = 13/40 (32%), Positives = 19/40 (47%)
Query: 20 FVFLRHFQYKRTRIHANLFISFILNNIMWIVWYKTVVDYI 59
FV++ H +YK + FI L NI Y+ VV +
Sbjct: 40 FVWMLHGKYKNEKAETEFFILLPLFNIACATIYQFVVQLL 79
>Z50859-7|CAH04735.1| 574|Caenorhabditis elegans Hypothetical
protein T26C5.3c protein.
Length = 574
Score = 24.6 bits (51), Expect = 8.5
Identities = 8/27 (29%), Positives = 18/27 (66%)
Query: 38 FISFILNNIMWIVWYKTVVDYIEVVQE 64
FIS + +++ ++WYK + I+ +Q+
Sbjct: 533 FISVAICSVIGVIWYKVFYNKIKYLQK 559
>Z50859-4|CAA90730.1| 538|Caenorhabditis elegans Hypothetical
protein T26C5.3b protein.
Length = 538
Score = 24.6 bits (51), Expect = 8.5
Identities = 8/27 (29%), Positives = 18/27 (66%)
Query: 38 FISFILNNIMWIVWYKTVVDYIEVVQE 64
FIS + +++ ++WYK + I+ +Q+
Sbjct: 497 FISVAICSVIGVIWYKVFYNKIKYLQK 523
>Z50859-3|CAA90728.1| 632|Caenorhabditis elegans Hypothetical
protein T26C5.3a protein.
Length = 632
Score = 24.6 bits (51), Expect = 8.5
Identities = 8/27 (29%), Positives = 18/27 (66%)
Query: 38 FISFILNNIMWIVWYKTVVDYIEVVQE 64
FIS + +++ ++WYK + I+ +Q+
Sbjct: 591 FISVAICSVIGVIWYKVFYNKIKYLQK 617
>AF106575-17|AAD56300.2| 333|Caenorhabditis elegans Serpentine
receptor, class h protein5 protein.
Length = 333
Score = 24.6 bits (51), Expect = 8.5
Identities = 11/47 (23%), Positives = 23/47 (48%)
Query: 25 HFQYKRTRIHANLFISFILNNIMWIVWYKTVVDYIEVVQENTVIRNF 71
HF R + A++F +L M +W T++ I ++ N+ + +
Sbjct: 43 HFSKYRNYLVAHVFSGLLLELHMGTIWKVTIILPIPIMCSNSPLAEY 89
>AF022984-1|AAB69953.1| 540|Caenorhabditis elegans Hypothetical
protein ZK488.6 protein.
Length = 540
Score = 24.6 bits (51), Expect = 8.5
Identities = 7/16 (43%), Positives = 15/16 (93%)
Query: 52 YKTVVDYIEVVQENTV 67
+KTVVDY++ +Q++++
Sbjct: 361 FKTVVDYLDSIQDDSI 376
>AC025726-32|AAY43988.1| 230|Caenorhabditis elegans Hypothetical
protein Y71G12B.32 protein.
Length = 230
Score = 24.6 bits (51), Expect = 8.5
Identities = 9/31 (29%), Positives = 17/31 (54%)
Query: 32 RIHANLFISFILNNIMWIVWYKTVVDYIEVV 62
+IH N F++ L I W + + ++EV+
Sbjct: 92 KIHCNKFLATFLGGQRAIAWLELIEGHVEVL 122
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.335 0.147 0.480
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,513,841
Number of Sequences: 27539
Number of extensions: 43570
Number of successful extensions: 198
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 178
Number of HSP's gapped (non-prelim): 22
length of query: 75
length of database: 12,573,161
effective HSP length: 55
effective length of query: 20
effective length of database: 11,058,516
effective search space: 221170320
effective search space used: 221170320
T: 11
A: 40
X1: 15 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (21.6 bits)
S2: 51 (24.6 bits)
- SilkBase 1999-2023 -