GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000547-TA|BGIBMGA000547-PA|IPR000832|GPCR, family 2,
secretin-like, IPR003287|Calcitonin receptor-related
         (75 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      21   1.7  
AY526236-1|AAS20469.1|   85|Apis mellifera epoxide hydrolase pro...    21   1.7  
AF134821-1|AAD40236.1|  226|Apis mellifera hexamerin protein.          21   1.7  
DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chlor...    19   8.8  
AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled rec...    19   8.8  

>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 21.0 bits (42), Expect = 1.7
 Identities = 7/14 (50%), Positives = 10/14 (71%)

Query: 52  YKTVVDYIEVVQEN 65
           YKT++DY    +EN
Sbjct: 421 YKTILDYYHKYKEN 434


>AY526236-1|AAS20469.1|   85|Apis mellifera epoxide hydrolase
          protein.
          Length = 85

 Score = 21.0 bits (42), Expect = 1.7
 Identities = 8/24 (33%), Positives = 13/24 (54%)

Query: 26 FQYKRTRIHANLFISFILNNIMWI 49
          F  K   +H N+  S  L+N+ W+
Sbjct: 17 FPEKIIGLHNNMCTSLNLSNLFWL 40


>AF134821-1|AAD40236.1|  226|Apis mellifera hexamerin protein.
          Length = 226

 Score = 21.0 bits (42), Expect = 1.7
 Identities = 7/14 (50%), Positives = 10/14 (71%)

Query: 52 YKTVVDYIEVVQEN 65
          YKT++DY    +EN
Sbjct: 47 YKTILDYYHKYKEN 60


>DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chloride
           channel protein.
          Length = 428

 Score = 18.6 bits (36), Expect = 8.8
 Identities = 7/30 (23%), Positives = 17/30 (56%)

Query: 42  ILNNIMWIVWYKTVVDYIEVVQENTVIRNF 71
           I N+ +W+   KT++  +++  + +   NF
Sbjct: 138 IPNHYLWLYKDKTILYMVKLTLKLSCAMNF 167


>AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled
          receptor protein.
          Length = 399

 Score = 18.6 bits (36), Expect = 8.8
 Identities = 9/19 (47%), Positives = 10/19 (52%)

Query: 21 VFLRHFQYKRTRIHANLFI 39
          V L  F Y+  RI  N FI
Sbjct: 57 VILSVFTYRPLRIVQNFFI 75


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.335    0.147    0.480 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,399
Number of Sequences: 429
Number of extensions: 537
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of query: 75
length of database: 140,377
effective HSP length: 46
effective length of query: 29
effective length of database: 120,643
effective search space:  3498647
effective search space used:  3498647
T: 11
A: 40
X1: 15 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 36 (20.2 bits)
S2: 36 (18.6 bits)