Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000546-TA|BGIBMGA000546-PA|undefined
(1221 letters)
Database: human
224,733 sequences; 73,234,838 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M33521-1|AAA35588.1| 1132|Homo sapiens protein ( Human HLA-B-ass... 43 0.008
M33519-1|AAA35587.1| 1132|Homo sapiens protein ( Human HLA-B-ass... 43 0.008
BX511262-9|CAM45800.1| 1132|Homo sapiens HLA-B associated transc... 43 0.008
BX511262-8|CAM45799.1| 1126|Homo sapiens HLA-B associated transc... 43 0.008
BC003133-1|AAH03133.1| 1126|Homo sapiens HLA-B associated transc... 43 0.008
BA000025-30|BAB63390.1| 1126|Homo sapiens BAT3 protein. 43 0.008
AL805934-16|CAI18510.1| 1229|Homo sapiens HLA-B associated trans... 43 0.008
AL805934-11|CAI18506.1| 1162|Homo sapiens HLA-B associated trans... 43 0.008
AL805934-9|CAI18501.1| 1126|Homo sapiens HLA-B associated transc... 43 0.008
AL805934-8|CAI18504.1| 1132|Homo sapiens HLA-B associated transc... 43 0.008
AL670886-2|CAI17784.1| 1126|Homo sapiens HLA-B associated transc... 43 0.008
AL670886-1|CAI17785.1| 1132|Homo sapiens HLA-B associated transc... 43 0.008
AL662847-2|CAI17659.1| 1132|Homo sapiens HLA-B associated transc... 43 0.008
AL662847-1|CAI17658.1| 1126|Homo sapiens HLA-B associated transc... 43 0.008
AL662801-54|CAI18314.1| 1132|Homo sapiens HLA-B associated trans... 43 0.008
AL662801-53|CAI18315.1| 1126|Homo sapiens HLA-B associated trans... 43 0.008
AF129756-16|AAD18085.1| 1229|Homo sapiens BAT3 protein. 43 0.008
AL805934-10|CAI18502.1| 1078|Homo sapiens HLA-B associated trans... 42 0.010
AL137619-1|CAB70845.1| 617|Homo sapiens hypothetical protein pr... 33 4.8
AK074178-1|BAB85004.1| 1007|Homo sapiens FLJ00251 protein protein. 33 4.8
>M33521-1|AAA35588.1| 1132|Homo sapiens protein ( Human
HLA-B-associated transcript 3 (BAT3) gene, 3' end. ).
Length = 1132
Score = 42.7 bits (96), Expect = 0.008
Identities = 44/178 (24%), Positives = 70/178 (39%), Gaps = 19/178 (10%)
Query: 1036 PRTSSHGEAWQPRPDQVSNSSTVP--PQNEANGRSPVGASRNGNVSPDLQFVSPVVLMQH 1093
P E P P Q N+S P EA R P A G S D Q + +
Sbjct: 954 PMEVQGAERASPEP-QRENASPAPGTTAEEAMSRGPPPAPEGG--SRDEQDGASAET-EP 1009
Query: 1094 WGE----EWVPVFTRDXXXXXXXXXXXXXFSDAYLTGMPSRKRRCVRQSRPSANLDNFMS 1149
W EWVP+ +D SDAYL+GMP+++R+ ++ P L +S
Sbjct: 1010 WAAAVPPEWVPIIQQDIQSQRKVKPQPP-LSDAYLSGMPAKRRKTMQGEGPQLLLSEAVS 1068
Query: 1150 DS--------LREXXXXXXXXXXXTIRTAFREHMRNIARNRASDSEDYDPARYVSAAR 1199
+ L ++ ++R+ +R+ + R + +Y P R+ +A R
Sbjct: 1069 RAAKAAGARPLTSPESLSRDLEAPEVQESYRQQLRSDIQKRLQEDPNYSPQRFPNAQR 1126
>M33519-1|AAA35587.1| 1132|Homo sapiens protein ( Human
HLA-B-associated transcript 3 (BAT3) mRNA, complete cds.
).
Length = 1132
Score = 42.7 bits (96), Expect = 0.008
Identities = 44/178 (24%), Positives = 70/178 (39%), Gaps = 19/178 (10%)
Query: 1036 PRTSSHGEAWQPRPDQVSNSSTVP--PQNEANGRSPVGASRNGNVSPDLQFVSPVVLMQH 1093
P E P P Q N+S P EA R P A G S D Q + +
Sbjct: 954 PMEVQGAERASPEP-QRENASPAPGTTAEEAMSRGPPPAPEGG--SRDEQDGASAET-EP 1009
Query: 1094 WGE----EWVPVFTRDXXXXXXXXXXXXXFSDAYLTGMPSRKRRCVRQSRPSANLDNFMS 1149
W EWVP+ +D SDAYL+GMP+++R+ ++ P L +S
Sbjct: 1010 WAAAVPPEWVPIIQQDIQSQRKVKPQPP-LSDAYLSGMPAKRRKTMQGEGPQLLLSEAVS 1068
Query: 1150 DS--------LREXXXXXXXXXXXTIRTAFREHMRNIARNRASDSEDYDPARYVSAAR 1199
+ L ++ ++R+ +R+ + R + +Y P R+ +A R
Sbjct: 1069 RAAKAAGARPLTSPESLSRDLEAPEVQESYRQQLRSDIQKRLQEDPNYSPQRFPNAQR 1126
>BX511262-9|CAM45800.1| 1132|Homo sapiens HLA-B associated transcript
3 protein.
Length = 1132
Score = 42.7 bits (96), Expect = 0.008
Identities = 44/178 (24%), Positives = 70/178 (39%), Gaps = 19/178 (10%)
Query: 1036 PRTSSHGEAWQPRPDQVSNSSTVP--PQNEANGRSPVGASRNGNVSPDLQFVSPVVLMQH 1093
P E P P Q N+S P EA R P A G S D Q + +
Sbjct: 954 PMEVQGAERASPEP-QRENASPAPGTTAEEAMSRGPPPAPEGG--SRDEQDGASAET-EP 1009
Query: 1094 WGE----EWVPVFTRDXXXXXXXXXXXXXFSDAYLTGMPSRKRRCVRQSRPSANLDNFMS 1149
W EWVP+ +D SDAYL+GMP+++R+ ++ P L +S
Sbjct: 1010 WAAAVPPEWVPIIQQDIQSQRKVKPQPP-LSDAYLSGMPAKRRKTMQGEGPQLLLSEAVS 1068
Query: 1150 DS--------LREXXXXXXXXXXXTIRTAFREHMRNIARNRASDSEDYDPARYVSAAR 1199
+ L ++ ++R+ +R+ + R + +Y P R+ +A R
Sbjct: 1069 RAAKAAGARPLTSPESLSRDLEAPEVQESYRQQLRSDIQKRLQEDPNYSPQRFPNAQR 1126
>BX511262-8|CAM45799.1| 1126|Homo sapiens HLA-B associated transcript
3 protein.
Length = 1126
Score = 42.7 bits (96), Expect = 0.008
Identities = 44/178 (24%), Positives = 70/178 (39%), Gaps = 19/178 (10%)
Query: 1036 PRTSSHGEAWQPRPDQVSNSSTVP--PQNEANGRSPVGASRNGNVSPDLQFVSPVVLMQH 1093
P E P P Q N+S P EA R P A G S D Q + +
Sbjct: 948 PMEVQGAERASPEP-QRENASPAPGTTAEEAMSRGPPPAPEGG--SRDEQDGASAET-EP 1003
Query: 1094 WGE----EWVPVFTRDXXXXXXXXXXXXXFSDAYLTGMPSRKRRCVRQSRPSANLDNFMS 1149
W EWVP+ +D SDAYL+GMP+++R+ ++ P L +S
Sbjct: 1004 WAAAVPPEWVPIIQQDIQSQRKVKPQPP-LSDAYLSGMPAKRRKTMQGEGPQLLLSEAVS 1062
Query: 1150 DS--------LREXXXXXXXXXXXTIRTAFREHMRNIARNRASDSEDYDPARYVSAAR 1199
+ L ++ ++R+ +R+ + R + +Y P R+ +A R
Sbjct: 1063 RAAKAAGARPLTSPESLSRDLEAPEVQESYRQQLRSDIQKRLQEDPNYSPQRFPNAQR 1120
>BC003133-1|AAH03133.1| 1126|Homo sapiens HLA-B associated transcript
3 protein.
Length = 1126
Score = 42.7 bits (96), Expect = 0.008
Identities = 44/178 (24%), Positives = 70/178 (39%), Gaps = 19/178 (10%)
Query: 1036 PRTSSHGEAWQPRPDQVSNSSTVP--PQNEANGRSPVGASRNGNVSPDLQFVSPVVLMQH 1093
P E P P Q N+S P EA R P A G S D Q + +
Sbjct: 948 PMEVQGAERASPEP-QRENASPAPGTTAEEAMSRGPPPAPEGG--SRDEQDGASAET-EP 1003
Query: 1094 WGE----EWVPVFTRDXXXXXXXXXXXXXFSDAYLTGMPSRKRRCVRQSRPSANLDNFMS 1149
W EWVP+ +D SDAYL+GMP+++R+ ++ P L +S
Sbjct: 1004 WAAAVPPEWVPIIQQDIQSQRKVKPQPP-LSDAYLSGMPAKRRKTMQGEGPQLLLSEAVS 1062
Query: 1150 DS--------LREXXXXXXXXXXXTIRTAFREHMRNIARNRASDSEDYDPARYVSAAR 1199
+ L ++ ++R+ +R+ + R + +Y P R+ +A R
Sbjct: 1063 RAAKAAGARPLTSPESLSRDLEAPEVQESYRQQLRSDIQKRLQEDPNYSPQRFPNAQR 1120
>BA000025-30|BAB63390.1| 1126|Homo sapiens BAT3 protein.
Length = 1126
Score = 42.7 bits (96), Expect = 0.008
Identities = 44/178 (24%), Positives = 70/178 (39%), Gaps = 19/178 (10%)
Query: 1036 PRTSSHGEAWQPRPDQVSNSSTVP--PQNEANGRSPVGASRNGNVSPDLQFVSPVVLMQH 1093
P E P P Q N+S P EA R P A G S D Q + +
Sbjct: 948 PMEVQGAERASPEP-QRENASPAPGTTAEEAMSRGPPPAPEGG--SRDEQDGASAET-EP 1003
Query: 1094 WGE----EWVPVFTRDXXXXXXXXXXXXXFSDAYLTGMPSRKRRCVRQSRPSANLDNFMS 1149
W EWVP+ +D SDAYL+GMP+++R+ ++ P L +S
Sbjct: 1004 WAAAVPPEWVPIIQQDIQSQRKVKPQPP-LSDAYLSGMPAKRRKTMQGEGPQLLLSEAVS 1062
Query: 1150 DS--------LREXXXXXXXXXXXTIRTAFREHMRNIARNRASDSEDYDPARYVSAAR 1199
+ L ++ ++R+ +R+ + R + +Y P R+ +A R
Sbjct: 1063 RAAKAAGARPLTSPESLSRDLEAPEVQESYRQQLRSDIQKRLQEDPNYSPQRFPNAQR 1120
>AL805934-16|CAI18510.1| 1229|Homo sapiens HLA-B associated transcript
3 protein.
Length = 1229
Score = 42.7 bits (96), Expect = 0.008
Identities = 44/178 (24%), Positives = 70/178 (39%), Gaps = 19/178 (10%)
Query: 1036 PRTSSHGEAWQPRPDQVSNSSTVP--PQNEANGRSPVGASRNGNVSPDLQFVSPVVLMQH 1093
P E P P Q N+S P EA R P A G S D Q + +
Sbjct: 1051 PMEVQGAERASPEP-QRENASPAPGTTAEEAMSRGPPPAPEGG--SRDEQDGASAET-EP 1106
Query: 1094 WGE----EWVPVFTRDXXXXXXXXXXXXXFSDAYLTGMPSRKRRCVRQSRPSANLDNFMS 1149
W EWVP+ +D SDAYL+GMP+++R+ ++ P L +S
Sbjct: 1107 WAAAVPPEWVPIIQQDIQSQRKVKPQPP-LSDAYLSGMPAKRRKTMQGEGPQLLLSEAVS 1165
Query: 1150 DS--------LREXXXXXXXXXXXTIRTAFREHMRNIARNRASDSEDYDPARYVSAAR 1199
+ L ++ ++R+ +R+ + R + +Y P R+ +A R
Sbjct: 1166 RAAKAAGARPLTSPESLSRDLEAPEVQESYRQQLRSDIQKRLQEDPNYSPQRFPNAQR 1223
>AL805934-11|CAI18506.1| 1162|Homo sapiens HLA-B associated transcript
3 protein.
Length = 1162
Score = 42.7 bits (96), Expect = 0.008
Identities = 44/178 (24%), Positives = 70/178 (39%), Gaps = 19/178 (10%)
Query: 1036 PRTSSHGEAWQPRPDQVSNSSTVP--PQNEANGRSPVGASRNGNVSPDLQFVSPVVLMQH 1093
P E P P Q N+S P EA R P A G S D Q + +
Sbjct: 984 PMEVQGAERASPEP-QRENASPAPGTTAEEAMSRGPPPAPEGG--SRDEQDGASAET-EP 1039
Query: 1094 WGE----EWVPVFTRDXXXXXXXXXXXXXFSDAYLTGMPSRKRRCVRQSRPSANLDNFMS 1149
W EWVP+ +D SDAYL+GMP+++R+ ++ P L +S
Sbjct: 1040 WAAAVPPEWVPIIQQDIQSQRKVKPQPP-LSDAYLSGMPAKRRKTMQGEGPQLLLSEAVS 1098
Query: 1150 DS--------LREXXXXXXXXXXXTIRTAFREHMRNIARNRASDSEDYDPARYVSAAR 1199
+ L ++ ++R+ +R+ + R + +Y P R+ +A R
Sbjct: 1099 RAAKAAGARPLTSPESLSRDLEAPEVQESYRQQLRSDIQKRLQEDPNYSPQRFPNAQR 1156
>AL805934-9|CAI18501.1| 1126|Homo sapiens HLA-B associated transcript
3 protein.
Length = 1126
Score = 42.7 bits (96), Expect = 0.008
Identities = 44/178 (24%), Positives = 70/178 (39%), Gaps = 19/178 (10%)
Query: 1036 PRTSSHGEAWQPRPDQVSNSSTVP--PQNEANGRSPVGASRNGNVSPDLQFVSPVVLMQH 1093
P E P P Q N+S P EA R P A G S D Q + +
Sbjct: 948 PMEVQGAERASPEP-QRENASPAPGTTAEEAMSRGPPPAPEGG--SRDEQDGASAET-EP 1003
Query: 1094 WGE----EWVPVFTRDXXXXXXXXXXXXXFSDAYLTGMPSRKRRCVRQSRPSANLDNFMS 1149
W EWVP+ +D SDAYL+GMP+++R+ ++ P L +S
Sbjct: 1004 WAAAVPPEWVPIIQQDIQSQRKVKPQPP-LSDAYLSGMPAKRRKTMQGEGPQLLLSEAVS 1062
Query: 1150 DS--------LREXXXXXXXXXXXTIRTAFREHMRNIARNRASDSEDYDPARYVSAAR 1199
+ L ++ ++R+ +R+ + R + +Y P R+ +A R
Sbjct: 1063 RAAKAAGARPLTSPESLSRDLEAPEVQESYRQQLRSDIQKRLQEDPNYSPQRFPNAQR 1120
>AL805934-8|CAI18504.1| 1132|Homo sapiens HLA-B associated transcript
3 protein.
Length = 1132
Score = 42.7 bits (96), Expect = 0.008
Identities = 44/178 (24%), Positives = 70/178 (39%), Gaps = 19/178 (10%)
Query: 1036 PRTSSHGEAWQPRPDQVSNSSTVP--PQNEANGRSPVGASRNGNVSPDLQFVSPVVLMQH 1093
P E P P Q N+S P EA R P A G S D Q + +
Sbjct: 954 PMEVQGAERASPEP-QRENASPAPGTTAEEAMSRGPPPAPEGG--SRDEQDGASAET-EP 1009
Query: 1094 WGE----EWVPVFTRDXXXXXXXXXXXXXFSDAYLTGMPSRKRRCVRQSRPSANLDNFMS 1149
W EWVP+ +D SDAYL+GMP+++R+ ++ P L +S
Sbjct: 1010 WAAAVPPEWVPIIQQDIQSQRKVKPQPP-LSDAYLSGMPAKRRKTMQGEGPQLLLSEAVS 1068
Query: 1150 DS--------LREXXXXXXXXXXXTIRTAFREHMRNIARNRASDSEDYDPARYVSAAR 1199
+ L ++ ++R+ +R+ + R + +Y P R+ +A R
Sbjct: 1069 RAAKAAGARPLTSPESLSRDLEAPEVQESYRQQLRSDIQKRLQEDPNYSPQRFPNAQR 1126
>AL670886-2|CAI17784.1| 1126|Homo sapiens HLA-B associated transcript
3 protein.
Length = 1126
Score = 42.7 bits (96), Expect = 0.008
Identities = 44/178 (24%), Positives = 70/178 (39%), Gaps = 19/178 (10%)
Query: 1036 PRTSSHGEAWQPRPDQVSNSSTVP--PQNEANGRSPVGASRNGNVSPDLQFVSPVVLMQH 1093
P E P P Q N+S P EA R P A G S D Q + +
Sbjct: 948 PMEVQGAERASPEP-QRENASPAPGTTAEEAMSRGPPPAPEGG--SRDEQDGASAET-EP 1003
Query: 1094 WGE----EWVPVFTRDXXXXXXXXXXXXXFSDAYLTGMPSRKRRCVRQSRPSANLDNFMS 1149
W EWVP+ +D SDAYL+GMP+++R+ ++ P L +S
Sbjct: 1004 WAAAVPPEWVPIIQQDIQSQRKVKPQPP-LSDAYLSGMPAKRRKTMQGEGPQLLLSEAVS 1062
Query: 1150 DS--------LREXXXXXXXXXXXTIRTAFREHMRNIARNRASDSEDYDPARYVSAAR 1199
+ L ++ ++R+ +R+ + R + +Y P R+ +A R
Sbjct: 1063 RAAKAAGARPLTSPESLSRDLEAPEVQESYRQQLRSDIQKRLQEDPNYSPQRFPNAQR 1120
>AL670886-1|CAI17785.1| 1132|Homo sapiens HLA-B associated transcript
3 protein.
Length = 1132
Score = 42.7 bits (96), Expect = 0.008
Identities = 44/178 (24%), Positives = 70/178 (39%), Gaps = 19/178 (10%)
Query: 1036 PRTSSHGEAWQPRPDQVSNSSTVP--PQNEANGRSPVGASRNGNVSPDLQFVSPVVLMQH 1093
P E P P Q N+S P EA R P A G S D Q + +
Sbjct: 954 PMEVQGAERASPEP-QRENASPAPGTTAEEAMSRGPPPAPEGG--SRDEQDGASAET-EP 1009
Query: 1094 WGE----EWVPVFTRDXXXXXXXXXXXXXFSDAYLTGMPSRKRRCVRQSRPSANLDNFMS 1149
W EWVP+ +D SDAYL+GMP+++R+ ++ P L +S
Sbjct: 1010 WAAAVPPEWVPIIQQDIQSQRKVKPQPP-LSDAYLSGMPAKRRKTMQGEGPQLLLSEAVS 1068
Query: 1150 DS--------LREXXXXXXXXXXXTIRTAFREHMRNIARNRASDSEDYDPARYVSAAR 1199
+ L ++ ++R+ +R+ + R + +Y P R+ +A R
Sbjct: 1069 RAAKAAGARPLTSPESLSRDLEAPEVQESYRQQLRSDIQKRLQEDPNYSPQRFPNAQR 1126
>AL662847-2|CAI17659.1| 1132|Homo sapiens HLA-B associated transcript
3 protein.
Length = 1132
Score = 42.7 bits (96), Expect = 0.008
Identities = 44/178 (24%), Positives = 70/178 (39%), Gaps = 19/178 (10%)
Query: 1036 PRTSSHGEAWQPRPDQVSNSSTVP--PQNEANGRSPVGASRNGNVSPDLQFVSPVVLMQH 1093
P E P P Q N+S P EA R P A G S D Q + +
Sbjct: 954 PMEVQGAERASPEP-QRENASPAPGTTAEEAMSRGPPPAPEGG--SRDEQDGASAET-EP 1009
Query: 1094 WGE----EWVPVFTRDXXXXXXXXXXXXXFSDAYLTGMPSRKRRCVRQSRPSANLDNFMS 1149
W EWVP+ +D SDAYL+GMP+++R+ ++ P L +S
Sbjct: 1010 WAAAVPPEWVPIIQQDIQSQRKVKPQPP-LSDAYLSGMPAKRRKTMQGEGPQLLLSEAVS 1068
Query: 1150 DS--------LREXXXXXXXXXXXTIRTAFREHMRNIARNRASDSEDYDPARYVSAAR 1199
+ L ++ ++R+ +R+ + R + +Y P R+ +A R
Sbjct: 1069 RAAKAAGARPLTSPESLSRDLEAPEVQESYRQQLRSDIQKRLQEDPNYSPQRFPNAQR 1126
>AL662847-1|CAI17658.1| 1126|Homo sapiens HLA-B associated transcript
3 protein.
Length = 1126
Score = 42.7 bits (96), Expect = 0.008
Identities = 44/178 (24%), Positives = 70/178 (39%), Gaps = 19/178 (10%)
Query: 1036 PRTSSHGEAWQPRPDQVSNSSTVP--PQNEANGRSPVGASRNGNVSPDLQFVSPVVLMQH 1093
P E P P Q N+S P EA R P A G S D Q + +
Sbjct: 948 PMEVQGAERASPEP-QRENASPAPGTTAEEAMSRGPPPAPEGG--SRDEQDGASAET-EP 1003
Query: 1094 WGE----EWVPVFTRDXXXXXXXXXXXXXFSDAYLTGMPSRKRRCVRQSRPSANLDNFMS 1149
W EWVP+ +D SDAYL+GMP+++R+ ++ P L +S
Sbjct: 1004 WAAAVPPEWVPIIQQDIQSQRKVKPQPP-LSDAYLSGMPAKRRKTMQGEGPQLLLSEAVS 1062
Query: 1150 DS--------LREXXXXXXXXXXXTIRTAFREHMRNIARNRASDSEDYDPARYVSAAR 1199
+ L ++ ++R+ +R+ + R + +Y P R+ +A R
Sbjct: 1063 RAAKAAGARPLTSPESLSRDLEAPEVQESYRQQLRSDIQKRLQEDPNYSPQRFPNAQR 1120
>AL662801-54|CAI18314.1| 1132|Homo sapiens HLA-B associated transcript
3 protein.
Length = 1132
Score = 42.7 bits (96), Expect = 0.008
Identities = 44/178 (24%), Positives = 70/178 (39%), Gaps = 19/178 (10%)
Query: 1036 PRTSSHGEAWQPRPDQVSNSSTVP--PQNEANGRSPVGASRNGNVSPDLQFVSPVVLMQH 1093
P E P P Q N+S P EA R P A G S D Q + +
Sbjct: 954 PMEVQGAERASPEP-QRENASPAPGTTAEEAMSRGPPPAPEGG--SRDEQDGASAET-EP 1009
Query: 1094 WGE----EWVPVFTRDXXXXXXXXXXXXXFSDAYLTGMPSRKRRCVRQSRPSANLDNFMS 1149
W EWVP+ +D SDAYL+GMP+++R+ ++ P L +S
Sbjct: 1010 WAAAVPPEWVPIIQQDIQSQRKVKPQPP-LSDAYLSGMPAKRRKTMQGEGPQLLLSEAVS 1068
Query: 1150 DS--------LREXXXXXXXXXXXTIRTAFREHMRNIARNRASDSEDYDPARYVSAAR 1199
+ L ++ ++R+ +R+ + R + +Y P R+ +A R
Sbjct: 1069 RAAKAAGARPLTSPESLSRDLEAPEVQESYRQQLRSDIQKRLQEDPNYSPQRFPNAQR 1126
>AL662801-53|CAI18315.1| 1126|Homo sapiens HLA-B associated transcript
3 protein.
Length = 1126
Score = 42.7 bits (96), Expect = 0.008
Identities = 44/178 (24%), Positives = 70/178 (39%), Gaps = 19/178 (10%)
Query: 1036 PRTSSHGEAWQPRPDQVSNSSTVP--PQNEANGRSPVGASRNGNVSPDLQFVSPVVLMQH 1093
P E P P Q N+S P EA R P A G S D Q + +
Sbjct: 948 PMEVQGAERASPEP-QRENASPAPGTTAEEAMSRGPPPAPEGG--SRDEQDGASAET-EP 1003
Query: 1094 WGE----EWVPVFTRDXXXXXXXXXXXXXFSDAYLTGMPSRKRRCVRQSRPSANLDNFMS 1149
W EWVP+ +D SDAYL+GMP+++R+ ++ P L +S
Sbjct: 1004 WAAAVPPEWVPIIQQDIQSQRKVKPQPP-LSDAYLSGMPAKRRKTMQGEGPQLLLSEAVS 1062
Query: 1150 DS--------LREXXXXXXXXXXXTIRTAFREHMRNIARNRASDSEDYDPARYVSAAR 1199
+ L ++ ++R+ +R+ + R + +Y P R+ +A R
Sbjct: 1063 RAAKAAGARPLTSPESLSRDLEAPEVQESYRQQLRSDIQKRLQEDPNYSPQRFPNAQR 1120
>AF129756-16|AAD18085.1| 1229|Homo sapiens BAT3 protein.
Length = 1229
Score = 42.7 bits (96), Expect = 0.008
Identities = 44/178 (24%), Positives = 70/178 (39%), Gaps = 19/178 (10%)
Query: 1036 PRTSSHGEAWQPRPDQVSNSSTVP--PQNEANGRSPVGASRNGNVSPDLQFVSPVVLMQH 1093
P E P P Q N+S P EA R P A G S D Q + +
Sbjct: 1051 PMEVQGAERASPEP-QRENASPAPGTTAEEAMSRGPPPAPEGG--SRDEQDGASAET-EP 1106
Query: 1094 WGE----EWVPVFTRDXXXXXXXXXXXXXFSDAYLTGMPSRKRRCVRQSRPSANLDNFMS 1149
W EWVP+ +D SDAYL+GMP+++R+ ++ P L +S
Sbjct: 1107 WAAAVPPEWVPIIQQDIQSQRKVKPQPP-LSDAYLSGMPAKRRKTMQGEGPQLLLSEAVS 1165
Query: 1150 DS--------LREXXXXXXXXXXXTIRTAFREHMRNIARNRASDSEDYDPARYVSAAR 1199
+ L ++ ++R+ +R+ + R + +Y P R+ +A R
Sbjct: 1166 RAAKAAGARPLTSPESLSRDLEAPEVQESYRQQLRSDIQKRLQEDPNYSPQRFPNAQR 1223
>AL805934-10|CAI18502.1| 1078|Homo sapiens HLA-B associated transcript
3 protein.
Length = 1078
Score = 42.3 bits (95), Expect = 0.010
Identities = 26/112 (23%), Positives = 50/112 (44%), Gaps = 9/112 (8%)
Query: 1096 EEWVPVFTRDXXXXXXXXXXXXXFSDAYLTGMPSRKRRCVRQSRPSANLDNFMSDS---- 1151
+EWVP+ +D SDAYL+GMP+++R+ ++ P L +S +
Sbjct: 962 QEWVPIIQQDIQSQRKVKPQPP-LSDAYLSGMPAKRRKTMQGEGPQLLLSEAVSRAAKAA 1020
Query: 1152 ----LREXXXXXXXXXXXTIRTAFREHMRNIARNRASDSEDYDPARYVSAAR 1199
L ++ ++R+ +R+ + R + +Y P R+ +A R
Sbjct: 1021 GARPLTSPESLSRDLEAPEVQESYRQQLRSDIQKRLQEDPNYSPQRFPNAQR 1072
>AL137619-1|CAB70845.1| 617|Homo sapiens hypothetical protein
protein.
Length = 617
Score = 33.5 bits (73), Expect = 4.8
Identities = 19/61 (31%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Query: 729 PYLRFRDGSRLSTPPPLPQAMEMAHSSGLHPTHIGVATASPYMEGEHLRGCPLRMCVESI 788
P L G +++ PP ME+A ++G+ PT +G A + GE C L + S+
Sbjct: 409 PQLSLPSGQQIARPPGTFLLMEVADTTGISPTVVG-CCALVWCGGEQTWQCILSALMASL 467
Query: 789 P 789
P
Sbjct: 468 P 468
>AK074178-1|BAB85004.1| 1007|Homo sapiens FLJ00251 protein protein.
Length = 1007
Score = 33.5 bits (73), Expect = 4.8
Identities = 19/61 (31%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Query: 729 PYLRFRDGSRLSTPPPLPQAMEMAHSSGLHPTHIGVATASPYMEGEHLRGCPLRMCVESI 788
P L G +++ PP ME+A ++G+ PT +G A + GE C L + S+
Sbjct: 799 PQLSLPSGQQIARPPGTFLLMEVADTTGISPTVVG-CCALVWCGGEQTWQCILSALMASL 857
Query: 789 P 789
P
Sbjct: 858 P 858
Database: human
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 73,234,838
Number of sequences in database: 224,733
Lambda K H
0.318 0.131 0.388
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 131,145,408
Number of Sequences: 224733
Number of extensions: 4816867
Number of successful extensions: 13041
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 20
Number of HSP's that attempted gapping in prelim test: 13005
Number of HSP's gapped (non-prelim): 56
length of query: 1221
length of database: 73,234,838
effective HSP length: 98
effective length of query: 1123
effective length of database: 51,211,004
effective search space: 57509957492
effective search space used: 57509957492
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 71 (32.7 bits)
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