Silkworm BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000545-TA|BGIBMGA000545-PA|IPR000225|Armadillo
         (767 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    29   0.12 
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    24   4.5  
U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.       23   5.9  

>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 29.1 bits (62), Expect = 0.12
 Identities = 16/42 (38%), Positives = 22/42 (52%)

Query: 553 PQNCQRFLENRGMEFFLACLKNFPDNEELLRNMMGLLGNVAE 594
           P NC   L    +  +  C KN P   EL +++ GLL NVA+
Sbjct: 716 PANCSPDLYAVMLNCWKECPKNRPTFTELSKSLEGLLENVAQ 757


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 23.8 bits (49), Expect = 4.5
 Identities = 19/66 (28%), Positives = 32/66 (48%), Gaps = 2/66 (3%)

Query: 98  TDEGFRFLMEHKPQEVELIQCEYLSPMSLETINRNSRNLVSLKFG-PATHVLA-QDESAY 155
           T +   F M     E ++IQ  Y+S   L+ +N   + L+S+  G   +H  +    SA 
Sbjct: 213 TIDPHNFNMISNDDESDIIQGGYISVTGLKRVNPKLKVLISVGEGRDGSHRFSTMVSSAN 272

Query: 156 KQRGFI 161
           ++R FI
Sbjct: 273 RRREFI 278


>U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.
          Length = 470

 Score = 23.4 bits (48), Expect = 5.9
 Identities = 9/35 (25%), Positives = 19/35 (54%)

Query: 657 VATAVERWDLHAERNINYRSFEPILSLLHAHHTPQ 691
           VA  + R+    E +  Y   +PI+++   ++TP+
Sbjct: 26  VADILSRYPSDGEASYEYPREQPIVAMFEVNNTPE 60


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.322    0.137    0.410 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 181,019
Number of Sequences: 317
Number of extensions: 7629
Number of successful extensions: 9
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 7
Number of HSP's gapped (non-prelim): 3
length of query: 767
length of database: 114,650
effective HSP length: 62
effective length of query: 705
effective length of database: 94,996
effective search space: 66972180
effective search space used: 66972180
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 47 (23.0 bits)