Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000545-TA|BGIBMGA000545-PA|IPR000225|Armadillo
(767 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_15433| Best HMM Match : Arm (HMM E-Value=9.7) 130 3e-30
SB_15650| Best HMM Match : No HMM Matches (HMM E-Value=.) 75 3e-13
SB_22886| Best HMM Match : LRR_1 (HMM E-Value=2e-06) 64 3e-10
SB_1687| Best HMM Match : LRR_2 (HMM E-Value=4.6e-07) 32 1.5
SB_6061| Best HMM Match : NACHT (HMM E-Value=0.00065) 31 3.5
SB_16184| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 4.6
SB_13832| Best HMM Match : LRR_1 (HMM E-Value=5.4e-10) 30 6.1
SB_24101| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 6.1
SB_5455| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 8.0
>SB_15433| Best HMM Match : Arm (HMM E-Value=9.7)
Length = 237
Score = 130 bits (315), Expect = 3e-30
Identities = 65/120 (54%), Positives = 84/120 (70%), Gaps = 5/120 (4%)
Query: 589 LGNVAEVGELRPQLMNKLFLTVFYDLLDSSSDGIEVSYNAAGVLAHMASDGPGAWTVDEP 648
+GNV+EV LRPQLM + VFY+LLDS ++ +EVSYNAAG+L H+ASDGP AWT +
Sbjct: 30 VGNVSEVDYLRPQLM--AYAEVFYELLDSVNE-LEVSYNAAGILCHLASDGPTAWTAETM 86
Query: 649 S--RVCVLHRVATAVERWDLHAERNINYRSFEPILSLLHAHHTPQCQHWAVWALANLTTV 706
S R + ++ VE+WD+ A R ++YRSF PIL L+ + TP QHWA WALANL V
Sbjct: 87 SLSRGQAMRKLIDCVEKWDIGATRQMSYRSFGPILRLIPKYETPAIQHWATWALANLCNV 146
>SB_15650| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 280
Score = 74.5 bits (175), Expect = 3e-13
Identities = 68/249 (27%), Positives = 114/249 (45%), Gaps = 24/249 (9%)
Query: 51 IILPAEICEKFLEIYQRINRINDNIANLFRDRFRTRLDAIKLRNSRITDEGFRFLMEHKP 110
+ LP ++CE F+ + DN + F + +R+ + L+ + ITD G + +
Sbjct: 32 VFLPEDVCEAFISKRLKSGDCTDNFLSSFSNPQTSRIVRVNLKGASITDRGLQLISCQPI 91
Query: 111 QEVELIQCEYLSPMSLETINRNSRNLVSLKFGPATHV--------------LAQDESAYK 156
+E+ + +C ++ ++ I + L L G + L ++ +
Sbjct: 92 RELNISRCLEVTQHGIKHICQCKNTLKCLNIGQCIRIMDFCDVAKLNNLRFLDLSKTLIE 151
Query: 157 QRGFIIFAPRLRRLTI-HKRGLAIFHLLLLKPLSNLTHLDLSECASAGSIWALTRLR-NL 214
Q F I + L++L + + I L +K + +LT LDLS C SI L L NL
Sbjct: 152 QYDFEIVSEGLQQLQVLNLAETVITDLGPVKNMRHLTSLDLSNCRDIKSIAPLEILNGNL 211
Query: 215 RSLVLHSVHWTKDIT---DWIIGLRALQHLDISQSNERHGKYLNP----NEVLTKLVTSL 267
R L+L++ +D D I+ L +LQHLD+S+ G + P E+L L + L
Sbjct: 212 RQLILYNCLGLEDFKKSIDTIVQLESLQHLDLSKDGRDFGMDVEPPYIDGEMLHSL-SQL 270
Query: 268 PALVSLDIS 276
P LV LDIS
Sbjct: 271 PKLVFLDIS 279
>SB_22886| Best HMM Match : LRR_1 (HMM E-Value=2e-06)
Length = 583
Score = 64.5 bits (150), Expect = 3e-10
Identities = 100/415 (24%), Positives = 173/415 (41%), Gaps = 39/415 (9%)
Query: 16 SPDSLLEICLEYLVEHLNIVTD--LDHTTRWRKL--KEDIILPAEICEKFLEIYQRINRI 71
SP SL +ICL Y+ + ++ ++ +++ K + L ++ E L ++
Sbjct: 5 SPPSLEQICLNYICGSIQVLCYEVQENVGNLQRIAFKFPVFLHEQLAESILRQLACTGQL 64
Query: 72 NDNIANLFRDRFRTRLDAIKLRNSRITDEGFRF-LMEHKPQEVELIQCEYLSPMSLETIN 130
N+ LF D+ RL +R+S + + G R LM H E+++ E +
Sbjct: 65 TLNVLTLFMDQNTCRLKRACIRSSDVREIGLRLILMHHNITELDICGTEIPFSELFASSL 124
Query: 131 RNSRNLVSLKFGPATHVLAQDESAYKQRGFIIFAPRLRRLTIHKRGLAIFHLLLLKPLS- 189
SL+ +H A+ E Y G+ L L + + F L + S
Sbjct: 125 EGYECTSSLRKLNISH--AKGEIDYAALGYF---KNLTSLDVSHNMFSDFDLKQISIKSP 179
Query: 190 NLTHLDLSECASAGSIWALTRLRN-LRSLVLHSVHWTKDITDWIIGLRALQHLDISQSNE 248
NL L++S C S A LR+ L +L + + AL+HLDIS++
Sbjct: 180 NLLELNIS-CTSITDAEAFGHLRSSLITLKAYHCPISWQSPTEFAKFTALRHLDISRNPG 238
Query: 249 RHGKYLNPN--EVLTKLVTSLPALVSLDISGTNLAGTGAATLSTVNDSTSDKMETEVRCD 306
Y P E L L+ AL +L+I +++GT D
Sbjct: 239 SPEGYDWPGDAEKLEMLLLDQNALRNLEI--LDISGTPRVM------------------D 278
Query: 307 IPGLVSRVNNP-LNFLGLYGTHHGACKRHDIPAKV-ISGDANEKQILIAAAAYMERPVML 364
+P V ++P L FLGL T + + +P + I+G+A E+QIL++ Y ER +
Sbjct: 279 LPLQVFISSHPRLKFLGLCNTGLSSYAKF-LPKDIEITGEATEQQILLSLCCYPERSSYM 337
Query: 365 TRVLNDLYYLFRYENNTNVLRALNVVLDAMDRHVSEKHIQISGSATLFYIVKGKE 419
T L L+ + + L +VL M++H + +Q++ + ++K E
Sbjct: 338 TESLRRLFQISKNWTQAR-FEVLQIVLPPMEKHPKDLRVQMAATRIANLVLKAME 391
>SB_1687| Best HMM Match : LRR_2 (HMM E-Value=4.6e-07)
Length = 483
Score = 32.3 bits (70), Expect = 1.5
Identities = 28/104 (26%), Positives = 45/104 (43%), Gaps = 9/104 (8%)
Query: 180 FHLLLLKPLSNLTHLDLSECASAGSIWALTRLRNLRSLVLHSVHWTKDITDWIIGLRALQ 239
FH + L+ L HL L+EC + + R+L + W DITD + LQ
Sbjct: 351 FHPQVTDSLTGLCHLTLAECLALDDDGLEAVADSCRNLKTLDLSWCWDITD-----KGLQ 405
Query: 240 HLDISQSNERHGKYLNPNEV----LTKLVTSLPALVSLDISGTN 279
++ ++ S R+ EV L ++ ++P L LD N
Sbjct: 406 YIILNCSEMRYLNICGLREVTGVPLRQVPPTMPHLTELDARQCN 449
>SB_6061| Best HMM Match : NACHT (HMM E-Value=0.00065)
Length = 879
Score = 31.1 bits (67), Expect = 3.5
Identities = 24/100 (24%), Positives = 46/100 (46%), Gaps = 7/100 (7%)
Query: 207 ALTRLRNLRSLVLHSVHWTKDITDWIIGLRALQHLDISQSNERHGKYLNPN-EVLTKLVT 265
AL +++ L L+++ D+ D ++ I Q N RH K+ + L +
Sbjct: 657 ALKENTSIKRLDLYNIAMDSDVADLFS-----ENKTIEQLNMRHSKFDDEGIAALARTQL 711
Query: 266 SLPALVSLDISGTNLAGTGAATLSTVNDSTSDKMETEVRC 305
P+L+ LD+S ++ GA ++ + S + +ET C
Sbjct: 712 HKPSLIDLDLSSNQISSKGAIAIAEML-SKNQLLETFRLC 750
>SB_16184| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 147
Score = 30.7 bits (66), Expect = 4.6
Identities = 13/36 (36%), Positives = 19/36 (52%)
Query: 720 GLRLLNILLNHPAPYDQIKNLACIVINNCTKYAVRD 755
G R LN+L++ PY + C+ IN C + V D
Sbjct: 13 GTRTLNLLISSQTPYPLGHAVTCLAINECLGFNVVD 48
>SB_13832| Best HMM Match : LRR_1 (HMM E-Value=5.4e-10)
Length = 637
Score = 30.3 bits (65), Expect = 6.1
Identities = 41/155 (26%), Positives = 63/155 (40%), Gaps = 10/155 (6%)
Query: 103 RFLMEHKP--QEVELIQCEYLSPMSLETINRNSRNLVSLKFGPATHVLAQDESAYKQRGF 160
+ + H P Q +++ C Y++ S+ R L L FG + R F
Sbjct: 243 KLIANHLPDLQYLDVKDCPYITCDSISYAAARLRKLRHLSFGGGGELHFLSSFKELNRMF 302
Query: 161 IIFAP--RLRRLTIHKRGLAIFHLL--LLKPLSNLTHLDLS--ECASAGSIWALTR-LRN 213
I LR L + +LK L+NLT+LD+ + S + +T+ L N
Sbjct: 303 IELGELTELRCLVFDVYNATTESSIHTMLKKLTNLTNLDMGYLDSVSDKTATLITKHLPN 362
Query: 214 LRSLVLHSVHWT-KDITDWIIGLRALQHLDISQSN 247
L+SL L S T + T L+ L LD+ N
Sbjct: 363 LQSLALSSRQLTDRGTTTLCCKLKKLTTLDLRSCN 397
>SB_24101| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 519
Score = 30.3 bits (65), Expect = 6.1
Identities = 20/55 (36%), Positives = 27/55 (49%)
Query: 213 NLRSLVLHSVHWTKDITDWIIGLRALQHLDISQSNERHGKYLNPNEVLTKLVTSL 267
N +LV S H D+ IIG AL++ SQ ER+ EVL LV ++
Sbjct: 40 NSMALVADSFHMLSDVMSLIIGYFALRYSKKSQRTERNTFGWQRAEVLGALVNAV 94
>SB_5455| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 570
Score = 29.9 bits (64), Expect = 8.0
Identities = 18/59 (30%), Positives = 30/59 (50%), Gaps = 3/59 (5%)
Query: 93 RNSRITDEGFRFLME--HKPQEVELIQCEYLSPMSLETINRNSRNLVSLKFGPATHVLA 149
RN+RIT+ GFR + E + Q + L+ + + SL + N RNLV + + +
Sbjct: 299 RNTRITESGFRSVFESCSELQSIRLLFTK-IDDDSLACLANNCRNLVDINLAGCERIFS 356
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.322 0.137 0.410
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,640,790
Number of Sequences: 59808
Number of extensions: 1053226
Number of successful extensions: 2174
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 2159
Number of HSP's gapped (non-prelim): 15
length of query: 767
length of database: 16,821,457
effective HSP length: 88
effective length of query: 679
effective length of database: 11,558,353
effective search space: 7848121687
effective search space used: 7848121687
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 64 (29.9 bits)
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