GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000545-TA|BGIBMGA000545-PA|IPR000225|Armadillo
         (767 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine beta-sy...    26   1.3  
DQ855485-1|ABH88172.1|  128|Apis mellifera chemosensory protein ...    25   2.3  
AJ973400-1|CAJ01447.1|  128|Apis mellifera hypothetical protein ...    25   2.3  
DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein pr...    24   5.3  
AY217747-1|AAP45005.1|  246|Apis mellifera short-chain dehydroge...    24   5.3  
Z26318-1|CAA81227.1|  544|Apis mellifera royal jelly protein RJP...    23   7.1  
DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.               23   7.1  
AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    23   9.3  

>AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine
           beta-synthase protein.
          Length = 504

 Score = 25.8 bits (54), Expect = 1.3
 Identities = 11/30 (36%), Positives = 21/30 (70%)

Query: 392 DAMDRHVSEKHIQISGSATLFYIVKGKEKE 421
           D +D+ + ++++++  SATL YI +  EKE
Sbjct: 436 DFVDKAMVKQYVKVKHSATLGYISRVLEKE 465


>DQ855485-1|ABH88172.1|  128|Apis mellifera chemosensory protein 4
           protein.
          Length = 128

 Score = 25.0 bits (52), Expect = 2.3
 Identities = 17/85 (20%), Positives = 38/85 (44%), Gaps = 4/85 (4%)

Query: 40  HTTRWRKLKEDIILPAE-ICEKFLEIYQRINRINDNIANLFR---DRFRTRLDAIKLRNS 95
           +TT++  +  D++L  E +   ++           + A L R   D           +  
Sbjct: 24  YTTKYDNVDIDVVLNTERLLNAYVNCLLDQGPCTPDAAELKRNLPDALENECSPCSEKQK 83

Query: 96  RITDEGFRFLMEHKPQEVELIQCEY 120
           +I D+  +FL+++KP+   L++ +Y
Sbjct: 84  KIADKVVQFLIDNKPEIWVLLEAKY 108


>AJ973400-1|CAJ01447.1|  128|Apis mellifera hypothetical protein
           protein.
          Length = 128

 Score = 25.0 bits (52), Expect = 2.3
 Identities = 17/85 (20%), Positives = 38/85 (44%), Gaps = 4/85 (4%)

Query: 40  HTTRWRKLKEDIILPAE-ICEKFLEIYQRINRINDNIANLFR---DRFRTRLDAIKLRNS 95
           +TT++  +  D++L  E +   ++           + A L R   D           +  
Sbjct: 24  YTTKYDNVDIDVVLNTERLLNAYVNCLLDQGPCTPDAAELKRNLPDALENECSPCSEKQK 83

Query: 96  RITDEGFRFLMEHKPQEVELIQCEY 120
           +I D+  +FL+++KP+   L++ +Y
Sbjct: 84  KIADKVVQFLIDNKPEIWVLLEAKY 108


>DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein
           protein.
          Length = 486

 Score = 23.8 bits (49), Expect = 5.3
 Identities = 9/24 (37%), Positives = 14/24 (58%)

Query: 364 LTRVLNDLYYLFRYENNTNVLRAL 387
           +T VL+  YY + Y N T  L ++
Sbjct: 21  MTNVLDFDYYFYDYSNRTQALESI 44


>AY217747-1|AAP45005.1|  246|Apis mellifera short-chain
           dehydrogenase/reductase protein.
          Length = 246

 Score = 23.8 bits (49), Expect = 5.3
 Identities = 12/55 (21%), Positives = 29/55 (52%)

Query: 432 ITALLDGMDAHLGDDTMMRNGCLTLCEFKIPNDVLFEYERAVQILLSGVTDVNQE 486
           I  +++ ++ +LG   ++ N      +  + ND + ++++   I L G+T + QE
Sbjct: 71  ILKVIEWVEKNLGAIDILINNATINIDVTLQNDEVLDWKKIFDINLLGLTCMIQE 125


>Z26318-1|CAA81227.1|  544|Apis mellifera royal jelly protein
           RJP57-1 protein.
          Length = 544

 Score = 23.4 bits (48), Expect = 7.1
 Identities = 22/100 (22%), Positives = 39/100 (39%), Gaps = 3/100 (3%)

Query: 60  KFLEIYQRINRINDNIANLFRDRFRTRLDAIKLRNSRITDEGFRFLMEHKPQEVELIQCE 119
           K +E   +  RIND   N +      R+  I   +    D  FR L  +    +   +C 
Sbjct: 361 KIMENLPQSGRINDPEGNEYMLALSNRMQKIINNDFNFNDVNFRILGANVDDLMRNTRCG 420

Query: 120 YLSPMSLETINRNSRNLVSLKFGPATHVLAQDESAYKQRG 159
                +    N +++N  +     A +  A +++A KQ G
Sbjct: 421 RYHNQNAGNQNADNQNADNQN---ANNQNADNQNANKQNG 457


>DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.
          Length = 828

 Score = 23.4 bits (48), Expect = 7.1
 Identities = 9/19 (47%), Positives = 13/19 (68%)

Query: 721 LRLLNILLNHPAPYDQIKN 739
           L++L + LNH   YDQ+ N
Sbjct: 655 LQVLALWLNHSPNYDQVTN 673


>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 23.0 bits (47), Expect = 9.3
 Identities = 13/60 (21%), Positives = 29/60 (48%), Gaps = 1/60 (1%)

Query: 502 CQVDGKQKRFLGNQGAIGKMLNLISD-RLNRRICDDVLEVAWSTMWNVTDETPQNCQRFL 560
           CQ     +  +  + ++ + LN+  + + N ++C ++ E   S    +     QNC+R+L
Sbjct: 623 CQSSKNSENSIMQRASMKENLNVYPEFQENVQLCSEISESYSSNNKTLCKCDAQNCRRYL 682


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.322    0.137    0.410 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 220,546
Number of Sequences: 429
Number of extensions: 9562
Number of successful extensions: 28
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 22
Number of HSP's gapped (non-prelim): 8
length of query: 767
length of database: 140,377
effective HSP length: 63
effective length of query: 704
effective length of database: 113,350
effective search space: 79798400
effective search space used: 79798400
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 47 (23.0 bits)