Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000544-TA|BGIBMGA000544-PA|IPR001611|Leucine-rich
repeat, IPR003591|Leucine-rich repeat, typical subtype
(562 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC4A8.12c |sds22||protein phosphatase regulatory subunit Sds22... 72 2e-13
SPCC1739.11c |cdc11||SIN component scaffold protein Cdc11|Schizo... 67 5e-12
SPBC19C7.03 |cyr1|git2|adenylate cyclase|Schizosaccharomyces pom... 64 5e-11
SPAC926.06c |||leucine-rich repeat protein, unknown|Schizosaccha... 43 1e-04
SPBC887.09c |||leucine-rich repeat protein Sog2 |Schizosaccharom... 42 2e-04
SPCC24B10.11c |||THO complex subunit 7 |Schizosaccharomyces pomb... 31 0.43
SPCC31H12.08c |ccr4|SPCC5E4.02c|CCR4-Not complex subunit Ccr4 |S... 31 0.56
SPBC215.08c |arg4||carbamoyl-phosphate synthase Arg4|Schizosacch... 31 0.56
SPAC1006.04c |mcp3|mug7|sequence orphan|Schizosaccharomyces pomb... 30 0.98
SPCC645.05c |myo2|rng5|myosin II heavy chain|Schizosaccharomyces... 29 1.7
SPBPJ4664.06 |gpt1||UDP-glucose-glycoprotein glucosyltransferase... 28 3.0
SPBP23A10.05 |ssr4||SWI/SNF and RSC complex subunit Ssr4|Schizos... 28 3.0
SPAC7D4.04 |taf1||Taz1 interacting factor 1|Schizosaccharomyces ... 28 3.0
SPAC1556.01c |rad50|SPAP4C9.01c|DNA repair protein Rad50|Schizos... 28 4.0
SPAC16E8.12c |||sequence orphan|Schizosaccharomyces pombe|chr 1|... 28 4.0
SPBC1861.08c |||U2 snRNP-associated protein Lea1 |Schizosaccharo... 27 5.2
SPAC1556.06.1 |meu1|SPAC1556.06a, SPAC1556.06|sequence orphan|Sc... 27 5.2
SPAC22H10.10 |alp21|sto1|tubulin specific chaperone cofactor E|S... 27 5.2
SPAC20G8.09c |||N-acetyltransferase Nat10 |Schizosaccharomyces p... 27 6.9
SPBC56F2.04 |utp20||U3 snoRNP protein Utp20|Schizosaccharomyces ... 27 6.9
SPAC23H3.03c |||nitrogen permease regulator family|Schizosacchar... 27 6.9
SPBC660.10 |||translation elongation factor G|Schizosaccharomyce... 27 6.9
SPAC22H12.03 |||mitochondrial hydrolase|Schizosaccharomyces pomb... 27 9.2
SPAC6F6.02c |pof5||F-box protein Pof5|Schizosaccharomyces pombe|... 27 9.2
>SPAC4A8.12c |sds22||protein phosphatase regulatory subunit Sds22
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 332
Score = 71.7 bits (168), Expect = 2e-13
Identities = 64/237 (27%), Positives = 122/237 (51%), Gaps = 15/237 (6%)
Query: 40 VKTLDLCRNKITKLTEEDFRDIQELEHLLVADNQISEIEKDALPKGLKHVHLGINKLNTL 99
V ++L +++I + + L+ L + NQI +IE ++P+ L + L N + +
Sbjct: 40 VDCVELIQSRIQSMASLGLERFKNLQSLCLRQNQIKKIE--SVPETLTELDLYDNLIVRI 97
Query: 100 NGALRDLDDLEWIFINANNLKSIENELPTKAKKMQLIHAAHNELQSLPSDLKLMPSLQSL 159
L ++ +L ++ ++ NN+K+I N K ++ + N ++ + +L+ + L +L
Sbjct: 98 EN-LDNVKNLTYLDLSFNNIKTIRNI--NHLKGLENLFFVQNRIRRI-ENLEGLDRLTNL 153
Query: 160 YFYGNNIKSLDETLQKSRNLMRIGLSFNKIEFLTK-DDFTEAEKLAELDIAYNELKYLNG 218
GN I+ + E L NL ++ + NKI TK ++F + +KL+ L I N +
Sbjct: 154 ELGGNKIRVI-ENLDTLVNLEKLWVGKNKI---TKFENFEKLQKLSLLSIQSNRITQFEN 209
Query: 219 SLRSLKSLRYLNLTHNYMTEFSLQEIKGLRRLSVIDLSHNQISLLT--GSLENLVDV 273
LR L ++HN +T FS E+ L L ++D+S+N I L+ L+NLV++
Sbjct: 210 LACLSHCLRELYVSHNGLTSFSGIEV--LENLEILDVSNNMIKHLSYLAGLKNLVEL 264
>SPCC1739.11c |cdc11||SIN component scaffold protein
Cdc11|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1045
Score = 67.3 bits (157), Expect = 5e-12
Identities = 65/252 (25%), Positives = 131/252 (51%), Gaps = 12/252 (4%)
Query: 34 LQHLPHVKTLDLCRNKITKLTEEDFRDIQELEHLLVADNQISEIEKDALPKGLKHVHLGI 93
+QHL + L C N+I +L+ + ++ LE LL+ +N+I EIE+ + + L + L
Sbjct: 708 IQHLDGLLKLSACNNRIKELSFTN-SNLHRLEELLLGNNEIEEIEEISSLQNLMVLQLDN 766
Query: 94 NKLNTLNGALRDLDDLEWIFINANNLKSIENELPTKAKKMQLIHAAHNELQSLPSDLKLM 153
NKL L A + + L + I+ N + +E + + ++ ++ N + P D++ +
Sbjct: 767 NKLTNLK-ASQPMIHLRILRISNNAIHQLEVD---QFPHLRTLYMDLNRF-NRPPDIRRL 821
Query: 154 PSLQSLYFYGNNIKSLDETLQKSRNLMRIGLSFNKIEFLTKDDFTEAEKLAELDIAYNEL 213
L + F + ++ + +Q S ++ + LS N F+T D + L++A +L
Sbjct: 822 KRLVNFSFRTQDPEASNFVIQPSLDIRNLYLSNN--TFVTLDCKHMFLGVRYLELANVQL 879
Query: 214 KYLNGSL-RSLKSLRYLNLTHNYMTEF-SLQEIKGLRRLSVIDLSHNQISLLTGSLENLV 271
K + + S+ +LR L+L+HNY+++ SL+ ++ + RL ++ ++ L L NL
Sbjct: 880 KEVPKYIATSMPNLRVLDLSHNYISDIESLKPLQMIHRLYLVGNRIKKMRNLCDILANL- 938
Query: 272 DVETRVLELRLD 283
+ VL+LR++
Sbjct: 939 -KQLNVLDLRMN 949
Score = 49.6 bits (113), Expect = 1e-06
Identities = 42/144 (29%), Positives = 69/144 (47%), Gaps = 7/144 (4%)
Query: 131 KKMQLIHAAHNELQSLPSDLKLMPSLQSLYFYGNNIKSLDETLQKSRNLMRIGLSFNKIE 190
K++ + + L SL +L PS++ L GN I L R+L + N++
Sbjct: 603 KRIIQLDISRRHLDSLIGLSELCPSIEELTLEGNEIAYLTGCPVTIRDLNAVE---NRLS 659
Query: 191 FLTKDDFTEAEKLAELDIAYNELKYLNGSLRSLKSLRYLNLTHNYMTEF-SLQEIKGLRR 249
LT F+ L LDI+YN+L+ L G L SL LR L + N++ +Q + GL +
Sbjct: 660 SLTS--FSNLLNLQYLDISYNQLEDLTG-LSSLIHLRELKVDSNHLWSLDGIQHLDGLLK 716
Query: 250 LSVIDLSHNQISLLTGSLENLVDV 273
LS + ++S +L L ++
Sbjct: 717 LSACNNRIKELSFTNSNLHRLEEL 740
Score = 41.5 bits (93), Expect = 3e-04
Identities = 29/86 (33%), Positives = 47/86 (54%), Gaps = 10/86 (11%)
Query: 203 LAELDIAYNELKYLNGSLRSLKSLRYLNLTHNYMTEFSLQEIKGLRRLSVIDLSHNQISL 262
+ EL + NE+ YL G ++R LN N ++ SL L L +D+S+NQ+
Sbjct: 628 IEELTLEGNEIAYLTGCP---VTIRDLNAVENRLS--SLTSFSNLLNLQYLDISYNQLED 682
Query: 263 LTGSLENLVDVETRVLELRLDHNHIF 288
LTG L +L+ + EL++D NH++
Sbjct: 683 LTG-LSSLIHLR----ELKVDSNHLW 703
Score = 41.1 bits (92), Expect = 4e-04
Identities = 25/87 (28%), Positives = 48/87 (55%), Gaps = 5/87 (5%)
Query: 16 VDYFSLADNSLPELPRHVLQHLPHVKTLDLCRNKITKLTEEDFRDIQELEHLLVADNQIS 75
V Y LA+ L E+P+++ +P+++ LDL N I+ + E + +Q + L + N+I
Sbjct: 869 VRYLELANVQLKEVPKYIATSMPNLRVLDLSHNYISDI--ESLKPLQMIHRLYLVGNRIK 926
Query: 76 EIEK--DALPKGLKHVHLGINKLNTLN 100
++ D L LK +++ ++N LN
Sbjct: 927 KMRNLCDIL-ANLKQLNVLDLRMNPLN 952
>SPBC19C7.03 |cyr1|git2|adenylate cyclase|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1692
Score = 64.1 bits (149), Expect = 5e-11
Identities = 65/273 (23%), Positives = 134/273 (49%), Gaps = 19/273 (6%)
Query: 20 SLADNSLPELPRHVLQHLPHVKTLDLCRNKITKLTEEDFRDIQELEHLLVADNQISEIEK 79
+++ N +LP ++ +K LD+ N + + +++LE L ++ N I E++
Sbjct: 435 NVSHNLSLDLPLDFMERCVKLKRLDISNN-LRSPRGKPITALRQLEVLNMSRNDIYELDP 493
Query: 80 ---DALPKG-LKHVHLGINKLNTLNGALRDLDDLEWIFINANNLKSIENELPTKAKKMQL 135
L + LK +++ NKL L + R L +L ++ ++ NN + + T+ +++
Sbjct: 494 LIFSGLSRNSLKELNIANNKLFFLPHSTRYLVNLTYLDLSYNNFVTFP-LIITELSQLET 552
Query: 136 IHAAHNELQSLPSDLKLMPSLQSLYFYGNNIKS-LDETLQKSRNLMRIGLSFNKIEFLTK 194
++ +HN L + S + + L+ LY N++ + L + + +NL I LS+N I +
Sbjct: 553 LNFSHNLLSQISSKIGSLVKLKHLYLQFNDLSNRLPQEIGLLKNLETIDLSYNAITNIA- 611
Query: 195 DDFTEAEKLAELDIAYNELKYLNGSLRSLKSLRYLNLTHNYMTEFSLQEIKGLRRLSVID 254
+E KL +++A N L + S S +++ + +T ++ L D
Sbjct: 612 -SLSECPKLNSINVACNLLSFYE---YSNPSATFIDFSFCPLT--TIDPAFSYSNLVYFD 665
Query: 255 LSHNQ-ISLLTGSLENLVDVETRVLELRLDHNH 286
+SH + I L +E LV+VET +++++NH
Sbjct: 666 ISHAKLIGLKDSVIETLVNVET----VKVNYNH 694
Score = 50.8 bits (116), Expect = 5e-07
Identities = 62/246 (25%), Positives = 115/246 (46%), Gaps = 13/246 (5%)
Query: 20 SLADNSLPELPRHVLQHLPHVKTLDLCRNKITKLTEEDFRDIQELEHLLVADNQISEIEK 79
++A+N L LP H ++L ++ LDL N ++ +LE L + N +S+I
Sbjct: 508 NIANNKLFFLP-HSTRYLVNLTYLDLSYNNFVTFPLI-ITELSQLETLNFSHNLLSQISS 565
Query: 80 D--ALPKGLKHVHLGINKL-NTLNGALRDLDDLEWIFINANNLKSIENELPTKAKKMQLI 136
+L K LKH++L N L N L + L +LE I ++ N + +I + ++ K+ I
Sbjct: 566 KIGSLVK-LKHLYLQFNDLSNRLPQEIGLLKNLETIDLSYNAITNIASL--SECPKLNSI 622
Query: 137 HAAHNELQSLPSDLKLMPSLQSLYFYGNNIKSLDETLQKSRNLMRIGLSFNKIEFLTKDD 196
+ A N L PS + F + ++D S NL+ +S K+ L
Sbjct: 623 NVACNLLSFYEYS---NPSATFIDFSFCPLTTIDPAFSYS-NLVYFDISHAKLIGLKDSV 678
Query: 197 FTEAEKLAELDIAYNELKYLNGSLRSLKSLRYLNLTHNYMTEFSLQEIKGLRRLSVIDLS 256
+ + + YN ++ ++ ++++L+YL+ T+ M+ S + L+ L +DL
Sbjct: 679 IETLVNVETVKVNYNHFTSISDAISAMQNLKYLSCTNCEMSYVS-PNLGKLKHLVHLDLH 737
Query: 257 HNQISL 262
N I +
Sbjct: 738 ANNIKI 743
Score = 47.6 bits (108), Expect = 5e-06
Identities = 57/254 (22%), Positives = 120/254 (47%), Gaps = 20/254 (7%)
Query: 12 KLDLVDYFSLADNSLPELPRHVLQHLPHVKTLDLCRNKITKL------TEEDFRDIQELE 65
KL + + L N++ P V Q + +K ++L N + K+ +++ R I +L+
Sbjct: 727 KLKHLVHLDLHANNIKIFPEEVWQ-VSSLKVVNLSSNILEKIKLPVATSKKLTRTISQLK 785
Query: 66 HL-LVADNQISEIE-KDALPKGLKHVHLGINKL-NTLNGALRDLDDLEWIFINANNLKSI 122
+ ++ N +S + ++ + ++ ++L N+L N AL L+ + ++ N L I
Sbjct: 786 IMRTLSGNPVSSLSSQEFVMPTVEELYLVDNRLGNDCFTALEYFKCLKVLNLSYNYLTEI 845
Query: 123 ENELPTKAKKMQLIHAAHNELQSLPSDLKLMPSLQSLYFYGNNIKSLDETLQKSRNLMRI 182
++ ++ + + NEL +L L++LY GN + S + S++L +
Sbjct: 846 PSKFFQNFSDLKHLFVSGNELANLSISSTAQVLLETLYANGNRLSSFPKNEALSKSLRFL 905
Query: 183 GLSFNKIEFLTKDDFTEAEKLAELDIAYNELKYLNGSLRSLKSLRYLNLTHNYMTEFSLQ 242
+S N ++ L + E + L +L +L+YLN L + + + T F+
Sbjct: 906 DISTNNLQNLAVEK-AEKKSLTKLP----QLEYLN-----LSGNTWFRFSEHEDTNFTKS 955
Query: 243 EIKGLRRLSVIDLS 256
+K L+ LS++DL+
Sbjct: 956 YLKNLKFLSIMDLN 969
Score = 40.7 bits (91), Expect = 5e-04
Identities = 55/235 (23%), Positives = 109/235 (46%), Gaps = 21/235 (8%)
Query: 44 DLCRNKITKLTEEDFRDIQELEHLLVADNQISEIEKDALP--KGLKHVHLGINKLNTLNG 101
D+ K+ L + + +E + V N + I DA+ + LK++ +++ ++
Sbjct: 665 DISHAKLIGLKDSVIETLVNVETVKVNYNHFTSIS-DAISAMQNLKYLSCTNCEMSYVSP 723
Query: 102 ALRDLDDLEWIFINANNLKSIENELPTKAKKMQLIHAAHNELQSLPSDLKLMPSLQSLYF 161
L L L + ++ANN+K E+ + +++++ + N L+ + +P S
Sbjct: 724 NLGKLKHLVHLDLHANNIKIFPEEV-WQVSSLKVVNLSSNILEKIK-----LPVATS--- 774
Query: 162 YGNNIKSLDETLQKSRNLMRIGLSFNKIEFLTKDDFTEAEKLAELDIAYNEL-KYLNGSL 220
K L T+ + + +MR LS N + L+ +F + EL + N L +L
Sbjct: 775 -----KKLTRTISQLK-IMRT-LSGNPVSSLSSQEFV-MPTVEELYLVDNRLGNDCFTAL 826
Query: 221 RSLKSLRYLNLTHNYMTEFSLQEIKGLRRLSVIDLSHNQISLLTGSLENLVDVET 275
K L+ LNL++NY+TE + + L + +S N+++ L+ S V +ET
Sbjct: 827 EYFKCLKVLNLSYNYLTEIPSKFFQNFSDLKHLFVSGNELANLSISSTAQVLLET 881
Score = 33.9 bits (74), Expect = 0.060
Identities = 26/100 (26%), Positives = 46/100 (46%), Gaps = 2/100 (2%)
Query: 176 SRNLMRIGLSFNKIEFLTKDDFTEAEKLAELDIAYNELKYLNGSLRSLKSLRYLNLTHNY 235
+ L+ + +S N L D KL LDI+ N + +L+ L LN++ N
Sbjct: 428 AHELISLNVSHNLSLDLPLDFMERCVKLKRLDISNNLRSPRGKPITALRQLEVLNMSRND 487
Query: 236 MTEFSLQEIKGLRR--LSVIDLSHNQISLLTGSLENLVDV 273
+ E GL R L +++++N++ L S LV++
Sbjct: 488 IYELDPLIFSGLSRNSLKELNIANNKLFFLPHSTRYLVNL 527
>SPAC926.06c |||leucine-rich repeat protein,
unknown|Schizosaccharomyces pombe|chr 1|||Manual
Length = 621
Score = 42.7 bits (96), Expect = 1e-04
Identities = 30/96 (31%), Positives = 49/96 (51%), Gaps = 1/96 (1%)
Query: 179 LMRIGLSFNKIEFLTKDDFTEAEKLAELDIAYNELKYLNGSLRSLKSLRYLNLTHNYMTE 238
L+ + S K++ + K+ F + L LD++ NEL + +L L L LNL N +T
Sbjct: 334 LLYLRCSSCKLKSIPKNVFLSLQSLVSLDLSGNELTEIPYALGELPQLCSLNLASNKITG 393
Query: 239 FSLQEIKGLRRLSVIDLSHNQISLLTGSLENLVDVE 274
L L ++ LS N ++ L+G LEN+ +E
Sbjct: 394 CRTFYHISLSHLQILVLSRNHLTSLSG-LENVPSLE 428
Score = 33.9 bits (74), Expect = 0.060
Identities = 28/98 (28%), Positives = 48/98 (48%), Gaps = 2/98 (2%)
Query: 142 ELQSLPSDLKL-MPSLQSLYFYGNNIKSLDETLQKSRNLMRIGLSFNKIEFLTKDDFTEA 200
+L+S+P ++ L + SL SL GN + + L + L + L+ NKI
Sbjct: 343 KLKSIPKNVFLSLQSLVSLDLSGNELTEIPYALGELPQLCSLNLASNKITGCRTFYHISL 402
Query: 201 EKLAELDIAYNELKYLNGSLRSLKSLRYLNLTHNYMTE 238
L L ++ N L L+G L ++ SL L++ N +T+
Sbjct: 403 SHLQILVLSRNHLTSLSG-LENVPSLEKLDIRDNSITD 439
Score = 30.3 bits (65), Expect = 0.74
Identities = 27/108 (25%), Positives = 53/108 (49%), Gaps = 6/108 (5%)
Query: 18 YFSLADNSLPELPRHVLQHLPHVKTLDLCRNKITKLTEEDFRDIQELEHLLVADNQISEI 77
Y + L +P++V L + +LDL N++T++ ++ +L L +A N+I+
Sbjct: 336 YLRCSSCKLKSIPKNVFLSLQSLVSLDLSGNELTEIPYA-LGELPQLCSLNLASNKITGC 394
Query: 78 EKDALPKGLKHVH---LGINKLNTLNGALRDLDDLEWIFINANNLKSI 122
+ L H+ L N L +L+G L ++ LE + I N++ +
Sbjct: 395 -RTFYHISLSHLQILVLSRNHLTSLSG-LENVPSLEKLDIRDNSITDV 440
Score = 26.6 bits (56), Expect = 9.2
Identities = 15/37 (40%), Positives = 19/37 (51%)
Query: 345 LPSLEELIAHHNNITVLDKDFHGLPSLCSADLSFNKI 381
L SL L N +T + LP LCS +L+ NKI
Sbjct: 355 LQSLVSLDLSGNELTEIPYALGELPQLCSLNLASNKI 391
>SPBC887.09c |||leucine-rich repeat protein Sog2
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 886
Score = 42.3 bits (95), Expect = 2e-04
Identities = 28/112 (25%), Positives = 54/112 (48%), Gaps = 6/112 (5%)
Query: 178 NLMRIGLSFNKIEFLTKDDFTEAE-KLAELDIAYNELKYLNGSLRSLKSLRYLNLTHNYM 236
N + + LS + L + + ++A L + +N +K + + LRYLN+ N +
Sbjct: 28 NALTLDLSHLNLRELPYEQLERIQGRIARLALGHNFIKSIGPEILKFTRLRYLNIRSNVL 87
Query: 237 TEFSLQEIKGLRRLSVIDLSHNQISLLTGSLENLVDVETRVLELRLDHNHIF 288
EF + + L L ++D+S N+I L S L++++ L + N +F
Sbjct: 88 REFP-ESLCRLESLEILDISRNKIKQLPESFGALMNLKV----LSISKNRLF 134
Score = 41.1 bits (92), Expect = 4e-04
Identities = 33/127 (25%), Positives = 59/127 (46%), Gaps = 3/127 (2%)
Query: 42 TLDLCRNKITKLTEEDFRDIQ-ELEHLLVADNQISEIEKDALP-KGLKHVHLGINKLNTL 99
TLDL + +L E IQ + L + N I I + L L+++++ N L
Sbjct: 31 TLDLSHLNLRELPYEQLERIQGRIARLALGHNFIKSIGPEILKFTRLRYLNIRSNVLREF 90
Query: 100 NGALRDLDDLEWIFINANNLKSIENELPTKAKKMQLIHAAHNELQSLPSDLKLMPSLQSL 159
+L L+ LE + I+ N +K + ++++ + N L LP+ + MP+L+ L
Sbjct: 91 PESLCRLESLEILDISRNKIKQLPESFGA-LMNLKVLSISKNRLFELPTYIAHMPNLEIL 149
Query: 160 YFYGNNI 166
N+I
Sbjct: 150 KIENNHI 156
Score = 33.5 bits (73), Expect = 0.080
Identities = 20/66 (30%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Query: 12 KLDLVDYFSLADNSLPELPRHVLQHLPHVKTLDLCRNKITKLTEEDFRDIQELEHLLVAD 71
K + Y ++ N L E P + + L ++ LD+ RNKI +L E F + L+ L ++
Sbjct: 73 KFTRLRYLNIRSNVLREFPESLCR-LESLEILDISRNKIKQL-PESFGALMNLKVLSISK 130
Query: 72 NQISEI 77
N++ E+
Sbjct: 131 NRLFEL 136
>SPCC24B10.11c |||THO complex subunit 7 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 202
Score = 31.1 bits (67), Expect = 0.43
Identities = 25/103 (24%), Positives = 49/103 (47%), Gaps = 3/103 (2%)
Query: 41 KTLDLCRNKITKLTEEDFRDIQELEHLLVADNQISEIEKDALPKGLKHVHLGINKLNTLN 100
KT C + T++++ + +D+ + L Q E+ K + KGL+ + L
Sbjct: 74 KTQTFCEAEKTEISQLE-QDLLVAQEELRKREQYDELAKPIMSKGLRSRTEQQESIGKLQ 132
Query: 101 GALRDLDDLEWIFINANNL-KSIENELPTKAKKMQ-LIHAAHN 141
A+R+L++ ++ A NL K I +E + +Q ++H N
Sbjct: 133 DAIRELEEENANYVKAWNLRKDIFDETLKQMNHLQSILHPPSN 175
>SPCC31H12.08c |ccr4|SPCC5E4.02c|CCR4-Not complex subunit Ccr4
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 690
Score = 30.7 bits (66), Expect = 0.56
Identities = 24/102 (23%), Positives = 47/102 (46%), Gaps = 1/102 (0%)
Query: 143 LQSLPSDLKLMPSLQSLYFYGNNIKSLDETLQKSRNLMRIGLSFNKIEFLTKDDFTEAEK 202
L+++ +DL L LY NN+ L + K +NL+ + S N I+ + + +
Sbjct: 170 LRNVSTDLFKFSFLTELYINHNNLTRLPPEIGKLKNLVILDASGNSIKTI-PPELGLLTE 228
Query: 203 LAELDIAYNELKYLNGSLRSLKSLRYLNLTHNYMTEFSLQEI 244
L E+ + N + + L +L L+ L + N + + +I
Sbjct: 229 LREVLLFDNMISVIPAELGTLFQLKILGIEGNPLQDVYKNQI 270
Score = 29.5 bits (63), Expect = 1.3
Identities = 16/41 (39%), Positives = 22/41 (53%)
Query: 348 LEELIAHHNNITVLDKDFHGLPSLCSADLSFNKIHTVNYDL 388
L EL +HNN+T L + L +L D S N I T+ +L
Sbjct: 183 LTELYINHNNLTRLPPEIGKLKNLVILDASGNSIKTIPPEL 223
Score = 27.1 bits (57), Expect = 6.9
Identities = 19/74 (25%), Positives = 35/74 (47%), Gaps = 1/74 (1%)
Query: 119 LKSIENELPTKAKKMQLIHAAHNELQSLPSDLKLMPSLQSLYFYGNNIKSLDETLQKSRN 178
L+++ +L K + ++ HN L LP ++ + +L L GN+IK++ L
Sbjct: 170 LRNVSTDL-FKFSFLTELYINHNNLTRLPPEIGKLKNLVILDASGNSIKTIPPELGLLTE 228
Query: 179 LMRIGLSFNKIEFL 192
L + L N I +
Sbjct: 229 LREVLLFDNMISVI 242
>SPBC215.08c |arg4||carbamoyl-phosphate synthase
Arg4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1160
Score = 30.7 bits (66), Expect = 0.56
Identities = 22/74 (29%), Positives = 33/74 (44%), Gaps = 1/74 (1%)
Query: 179 LMRIGLSFNKIEFLTKDDFTEAEKLAELDIAYNELKYLNGSLRSLKSLRYLNLTHNYMTE 238
++ G S +KI LTK D KLA + Y EL+ + GSL L L ++
Sbjct: 511 MLNQGYSIDKIHDLTKIDKWFLSKLANMAKVYKELEEI-GSLYGLNKEIMLRAKKTGFSD 569
Query: 239 FSLQEIKGLRRLSV 252
+ ++ G L V
Sbjct: 570 LQISKLVGASELDV 583
>SPAC1006.04c |mcp3|mug7|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 952
Score = 29.9 bits (64), Expect = 0.98
Identities = 15/39 (38%), Positives = 24/39 (61%)
Query: 114 INANNLKSIENELPTKAKKMQLIHAAHNELQSLPSDLKL 152
I A+NLK EN+ + +K+ + + NE+Q+ DLKL
Sbjct: 291 IVASNLKQAENKTISYEEKLSIAQNSINEIQTQNRDLKL 329
>SPCC645.05c |myo2|rng5|myosin II heavy chain|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1526
Score = 29.1 bits (62), Expect = 1.7
Identities = 45/186 (24%), Positives = 80/186 (43%), Gaps = 17/186 (9%)
Query: 40 VKTLDLCRNKITKLTEEDFRDIQELEHLLVADNQISEIEKDALPKGLKHVHLGINKLNTL 99
+ T D +K+TK + +IQE+ N+ S ++ +L + LK V KL
Sbjct: 987 IVTKDAELDKLTKYISDYKTEIQEMRLTNQKMNEKSIQQEGSLSESLKRV----KKLERE 1042
Query: 100 NGAL-RDLDDLEWIFINANNLKSI-ENELPTKAKKMQLIHAAHNELQSLPSDLKLMPSLQ 157
N L D+ L+ + LK + E + +K+ + A +L L +L+ +
Sbjct: 1043 NSTLISDVSILKQQKEELSVLKGVQELTINNLEEKVNYLEADVKQLPKLKKELESLNDKD 1102
Query: 158 SLYFYGNNIKSLDETLQKSRNLMRIGLSFNKIEFLTKDDFTEAEK---LAELDIAYNELK 214
LY L T K ++ N I+ LTK+ + EK L++ + Y EL+
Sbjct: 1103 QLY-------QLQATKNKELE-AKVKECLNNIKSLTKELENKEEKCQNLSDASLKYIELQ 1154
Query: 215 YLNGSL 220
++ +L
Sbjct: 1155 EIHENL 1160
Score = 28.3 bits (60), Expect = 3.0
Identities = 35/118 (29%), Positives = 54/118 (45%), Gaps = 16/118 (13%)
Query: 117 NNLKSIENELPTKAKKMQLIHAA---HNELQSLPSDLKLMPS--------LQSLYFYGNN 165
NN+KS+ EL K +K Q + A + ELQ + +L L S + L
Sbjct: 1124 NNIKSLTKELENKEEKCQNLSDASLKYIELQEIHENLLLKVSDLENYKKKYEGLQLDLEG 1183
Query: 166 IKSLDETLQKSRNLMRIGLSFNKIEFLTKDDFTEAEKLAELDIAYNELKYLNGSLRSL 223
+K +D Q+ R L+FN E L + + EKL+ +A +E K L+ + SL
Sbjct: 1184 LKDVDTNFQELSKKHR-DLTFNH-ESLLRQSASYKEKLS---LASSENKDLSNKVSSL 1236
>SPBPJ4664.06 |gpt1||UDP-glucose-glycoprotein glucosyltransferase
Gpt1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1448
Score = 28.3 bits (60), Expect = 3.0
Identities = 15/47 (31%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Query: 35 QHLPHVKTLDLCRNKITKLTEEDFRDIQELEHLLVADNQISEIEKDA 81
+ L KT+DLC+N +TK + D R +++ DN+I+ + + A
Sbjct: 1383 ESLKTAKTIDLCQNPLTKEKKLD-RARRQVSEWTSYDNEIASVLQTA 1428
>SPBP23A10.05 |ssr4||SWI/SNF and RSC complex subunit
Ssr4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 395
Score = 28.3 bits (60), Expect = 3.0
Identities = 28/92 (30%), Positives = 46/92 (50%), Gaps = 7/92 (7%)
Query: 86 LKHVHLGINKLNTLNGALRDLDDLEWIFINANNLKSIENELPTKAKKMQLIHAAHNELQS 145
+KH L TL +++D++ ++ N+++ + EL K K QL+ + QS
Sbjct: 289 IKHAEWMSQVLLTLQ-SVKDIEPPA-LWQEPNSMEELGKEL--KDNKEQLVKQ-DQKYQS 343
Query: 146 LPSDLKLMPSLQSLYFYGNNIKSLDE--TLQK 175
L DL S+ +L +NIKS +E LQK
Sbjct: 344 LQGDLSYTDSMSNLLKEFSNIKSAEECDVLQK 375
>SPAC7D4.04 |taf1||Taz1 interacting factor 1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 926
Score = 28.3 bits (60), Expect = 3.0
Identities = 33/145 (22%), Positives = 62/145 (42%), Gaps = 5/145 (3%)
Query: 124 NELPTKAKKMQLIHAAHNELQSLPSDLKLMPSLQSLYFYGNNIKSLDETLQKSRNLMRIG 183
NE ++ +I+ L + D +PS+ SL G I ++ + + +
Sbjct: 52 NETVLNSESDVVIYVLDQNLLTFTYDGDKIPSIPSLK--GQPISNVLTGIIADSSSDQWK 109
Query: 184 LSFNKIEFLTKDDFTEAEKLA-ELDIAYNELKYLNGSLRSLKSLRYLNLTHNYMTEFSLQ 242
+K L D + K+ +L + ++E Y + ++ YL + M +
Sbjct: 110 DKISKCLSLLSDILESSSKIHNQLSVCHDE--YSTSIVSPEVAMNYLQRRQSGMKDLLFV 167
Query: 243 EIKGLRRLSVIDLSHNQISLLTGSL 267
+ L R+SV DL H+ ++L TGSL
Sbjct: 168 FYERLDRVSVSDLLHDFLALPTGSL 192
>SPAC1556.01c |rad50|SPAP4C9.01c|DNA repair protein
Rad50|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1290
Score = 27.9 bits (59), Expect = 4.0
Identities = 37/155 (23%), Positives = 66/155 (42%), Gaps = 13/155 (8%)
Query: 59 RDIQELEHLLVADNQISEIEKDALPKGLKHVHLGINKLNTLNGALRDLDDLEWIF----I 114
R + + E L ++ S I D +P V+ + L TL ++L + + IF +
Sbjct: 679 RSLDKEEEKLFVEHCHSMI--DVIPSKSAEVY---SHLETLTKTFKNLSEAKPIFDEIEL 733
Query: 115 NANNLKSIENELPTKAKKMQLIHAAHNELQSLPSDLKLM-PSLQSLYFYGNNIKSLDE-- 171
L + EL +Q + +E+QS L L +L+ L +I +L+E
Sbjct: 734 LDKRLSETKTELSDLQGDLQGLDIRKDEIQSELDTLYLRRANLEKLQLLVKDISNLEEEI 793
Query: 172 -TLQKSRNLMRIGLSFNKIEFLTKDDFTEAEKLAE 205
T+ + ++RI L + + + E EKL E
Sbjct: 794 RTIDRETEVLRIELPSSIAHHNLDEIYAEREKLLE 828
>SPAC16E8.12c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 170
Score = 27.9 bits (59), Expect = 4.0
Identities = 24/117 (20%), Positives = 48/117 (41%), Gaps = 2/117 (1%)
Query: 159 LYFYGNNIKSLDETLQKSRNLMRIGLSFNKIEFLTKDDFTEAEKLAELDIAYNELKYLNG 218
+Y Y + S+D+ L + ++ R L + L K D + K + + + Y E +
Sbjct: 1 MYVYSQALSSIDDLLNRDTSVERRNLVARNLSLLLKSDDVQTRKKSHIAM-YAEAITHSN 59
Query: 219 SLRSLKSLRYLNL-THNYMTEFSLQEIKGLRRLSVIDLSHNQISLLTGSLENLVDVE 274
LR + + + N+ F+ + IK + I S + +L + L+ E
Sbjct: 60 VLRLEHCYQKMEMKLPNFFIPFTPEVIKEQKTSRPIRASRRRANLRNRRAKELLAAE 116
>SPBC1861.08c |||U2 snRNP-associated protein Lea1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 239
Score = 27.5 bits (58), Expect = 5.2
Identities = 14/68 (20%), Positives = 34/68 (50%), Gaps = 1/68 (1%)
Query: 10 FTKLDLVDYFSLADNSLPELPRHVLQHLPHVKTLDLCRNKITKLTEED-FRDIQELEHLL 68
F ++ + +N + + + + LP++KTL L +N + ++ + D +L +L
Sbjct: 59 FPRMKRLQTLLCGNNRITAIAPDIGKVLPNLKTLSLAQNHLQEIADLDPLASCPQLTNLS 118
Query: 69 VADNQISE 76
DN +++
Sbjct: 119 CIDNPVAQ 126
>SPAC1556.06.1 |meu1|SPAC1556.06a, SPAC1556.06|sequence
orphan|Schizosaccharomyces pombe|chr 1|||Manual
Length = 776
Score = 27.5 bits (58), Expect = 5.2
Identities = 22/63 (34%), Positives = 32/63 (50%), Gaps = 5/63 (7%)
Query: 91 LGINKLNTLNGALR-DLDDL-EWIFINANNLKSIENELPTKAKKMQLIHAAHNELQSLPS 148
L + LN N +R +LD L E + LKS N L +AK +Q++ N QSL
Sbjct: 501 LELEALNRKNDLIRGELDSLKEKNLVAQKQLKSANNTLHVRAKHIQIL---ENTNQSLKK 557
Query: 149 DLK 151
+L+
Sbjct: 558 NLE 560
>SPAC22H10.10 |alp21|sto1|tubulin specific chaperone cofactor
E|Schizosaccharomyces pombe|chr 1|||Manual
Length = 511
Score = 27.5 bits (58), Expect = 5.2
Identities = 31/127 (24%), Positives = 57/127 (44%), Gaps = 5/127 (3%)
Query: 152 LMPSLQSLYFYGNNIKSLDET--LQKSRNLMRIGLSFNKIEFLTKDDFTEAEKLAELDIA 209
L+P L L G + S D + +L + L N+I F + L L +A
Sbjct: 190 LIPHLTQLSVNGCGLNSKDVQWITETFPSLEVLYLEANEIILSKATSFKNLQFLQTLSLA 249
Query: 210 YN-ELKYLNG-SLRSLKSLRYLNLTHNYMTEFSLQEIKGLRRLSVIDLSHNQISLLTGSL 267
N L +G ++ + + LNL+ + + + + L +L+ +D+S N I + SL
Sbjct: 250 NNLNLYSADGYAVDVFQGINNLNLSSTSLADVAELPVHTLHKLTFLDISENNIRDIR-SL 308
Query: 268 ENLVDVE 274
++L +E
Sbjct: 309 DHLRTLE 315
>SPAC20G8.09c |||N-acetyltransferase Nat10 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1033
Score = 27.1 bits (57), Expect = 6.9
Identities = 16/63 (25%), Positives = 30/63 (47%)
Query: 133 MQLIHAAHNELQSLPSDLKLMPSLQSLYFYGNNIKSLDETLQKSRNLMRIGLSFNKIEFL 192
++ + + N L + L+P L LYF G S+ + + L+ +GL + I+ L
Sbjct: 824 LKRLESYSNNLLDYHVIVDLLPKLAHLYFSGKFPDSVKLSPVQQSVLLALGLQYKTIDTL 883
Query: 193 TKD 195
K+
Sbjct: 884 EKE 886
>SPBC56F2.04 |utp20||U3 snoRNP protein Utp20|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 2493
Score = 27.1 bits (57), Expect = 6.9
Identities = 18/57 (31%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Query: 161 FYGNNIKSLDETLQKSRNLMRIGLSFNKIEFLTKDDFTEAEKLAELDIAYNELKYLN 217
F+ ++S TL +S++++ I + + I T D F E EKL I L Y+N
Sbjct: 251 FFEILLRSEIYTLPRSKSVI-IPVLISTIHHCTSDSFNELEKLIISKITGEPLLYIN 306
>SPAC23H3.03c |||nitrogen permease regulator
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 409
Score = 27.1 bits (57), Expect = 6.9
Identities = 16/59 (27%), Positives = 28/59 (47%), Gaps = 3/59 (5%)
Query: 338 EETSKTFLPSLEELIAHHNNITVLDKDFHGLPSLCSADLSFNKIHTVNYDLVSKSRCTI 396
EE S ++P ++ L N+ VL+K H + L + F+ I + D+ + C I
Sbjct: 112 EEDSACYIPLVKRLA---RNLEVLEKQIHYISDLNKRPVIFSVIEQILEDMNNFCECMI 167
>SPBC660.10 |||translation elongation factor G|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 813
Score = 27.1 bits (57), Expect = 6.9
Identities = 14/44 (31%), Positives = 25/44 (56%)
Query: 228 YLNLTHNYMTEFSLQEIKGLRRLSVIDLSHNQISLLTGSLENLV 271
Y L + SL +++ R ++ID+S N ++L T + ENL+
Sbjct: 499 YERLVSEFGARASLGKVQVGYRETLIDVSFNSVTLSTENKENLI 542
>SPAC22H12.03 |||mitochondrial hydrolase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 270
Score = 26.6 bits (56), Expect = 9.2
Identities = 13/30 (43%), Positives = 18/30 (60%)
Query: 384 VNYDLVSKSRCTINGVPSILKIYLQDNPVL 413
V +L+SKS TI G P+ L + D+P L
Sbjct: 187 VPIELISKSLKTIEGFPASLNDLVYDSPTL 216
>SPAC6F6.02c |pof5||F-box protein Pof5|Schizosaccharomyces pombe|chr
1|||Manual
Length = 348
Score = 26.6 bits (56), Expect = 9.2
Identities = 13/41 (31%), Positives = 26/41 (63%), Gaps = 4/41 (9%)
Query: 197 FTEAEKLAELDIAYN----ELKYLNGSLRSLKSLRYLNLTH 233
F++ +KL ++D++ +L+YL G ++ LK L Y+ L +
Sbjct: 118 FSQCQKLKKIDLSILSEKIDLQYLFGGIQHLKHLEYIILPY 158
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.135 0.387
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,528,838
Number of Sequences: 5004
Number of extensions: 110922
Number of successful extensions: 397
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 12
Number of HSP's that attempted gapping in prelim test: 339
Number of HSP's gapped (non-prelim): 48
length of query: 562
length of database: 2,362,478
effective HSP length: 76
effective length of query: 486
effective length of database: 1,982,174
effective search space: 963336564
effective search space used: 963336564
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 56 (26.6 bits)
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