GeneModel BLAST Result against fruitfly

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000543-TA|BGIBMGA000543-PA|undefined
         (118 letters)

Database: fruitfly 
           52,641 sequences; 24,830,863 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT003535-1|AAO39539.1|  817|Drosophila melanogaster RE09158p pro...    62   2e-10
AE014296-1279|AAF50544.2|  817|Drosophila melanogaster CG32372-P...    62   2e-10

>BT003535-1|AAO39539.1|  817|Drosophila melanogaster RE09158p
           protein.
          Length = 817

 Score = 62.1 bits (144), Expect = 2e-10
 Identities = 26/86 (30%), Positives = 52/86 (60%), Gaps = 1/86 (1%)

Query: 28  CAMRREISPCTCRREDTGTGTVLVVCQRINAYEEIARALTNKFSTETKIGLDISYSQLPD 87
           C++R EISPCTC         V + C+++ ++  +  +L NK + +T I L I++SQL D
Sbjct: 16  CSVRPEISPCTCET-GKAWNHVELSCEKLESFNAVVDSLANKLNADTNIDLKITHSQLDD 74

Query: 88  FAEHSFRELGLSITRLKLNFDNLRQV 113
               SF ++  ++ +L++ +++L+ +
Sbjct: 75  LEMRSFTDMNFNLYKLRMQWNSLKSL 100


>AE014296-1279|AAF50544.2|  817|Drosophila melanogaster CG32372-PA
           protein.
          Length = 817

 Score = 62.1 bits (144), Expect = 2e-10
 Identities = 26/86 (30%), Positives = 52/86 (60%), Gaps = 1/86 (1%)

Query: 28  CAMRREISPCTCRREDTGTGTVLVVCQRINAYEEIARALTNKFSTETKIGLDISYSQLPD 87
           C++R EISPCTC         V + C+++ ++  +  +L NK + +T I L I++SQL D
Sbjct: 16  CSVRPEISPCTCET-GKAWNHVELSCEKLESFNAVVDSLANKLNADTNIDLKITHSQLDD 74

Query: 88  FAEHSFRELGLSITRLKLNFDNLRQV 113
               SF ++  ++ +L++ +++L+ +
Sbjct: 75  LEMRSFTDMNFNLYKLRMQWNSLKSL 100


  Database: fruitfly
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 24,830,863
  Number of sequences in database:  52,641
  
Lambda     K      H
   0.324    0.135    0.406 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,317,792
Number of Sequences: 52641
Number of extensions: 136209
Number of successful extensions: 383
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 379
Number of HSP's gapped (non-prelim): 2
length of query: 118
length of database: 24,830,863
effective HSP length: 76
effective length of query: 42
effective length of database: 20,830,147
effective search space: 874866174
effective search space used: 874866174
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.6 bits)
S2: 56 (26.6 bits)