Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000542-TA|BGIBMGA000542-PA|IPR003959|AAA ATPase, central
region, IPR003593|AAA ATPase
(631 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g16930.1 68418.m01984 AAA-type ATPase family protein contains... 344 1e-94
At3g03060.1 68416.m00302 AAA-type ATPase family protein contains... 335 6e-92
At2g18330.1 68415.m02136 AAA-type ATPase family protein contains... 320 2e-87
At4g36580.1 68417.m05193 AAA-type ATPase family protein contains... 303 2e-82
At5g53540.1 68418.m06653 MSP1 protein, putative / intramitochond... 81 2e-15
At1g50140.1 68414.m05623 AAA-type ATPase family protein contains... 81 3e-15
At1g64110.2 68414.m07264 AAA-type ATPase family protein contains... 80 4e-15
At1g64110.1 68414.m07263 AAA-type ATPase family protein contains... 80 4e-15
At4g28000.1 68417.m04016 AAA-type ATPase family protein contains... 79 7e-15
At4g04180.1 68417.m00593 AAA-type ATPase family protein contains... 79 7e-15
At4g27680.1 68417.m03980 MSP1 protein, putative / intramitochond... 78 2e-14
At3g19740.1 68416.m02499 AAA-type ATPase family protein contains... 78 2e-14
At3g56690.1 68416.m06306 calmodulin-binding protein identical to... 76 6e-14
At1g79560.1 68414.m09275 FtsH protease, putative contains simila... 76 8e-14
At4g24860.1 68417.m03559 AAA-type ATPase family protein contains... 73 4e-13
At4g02480.1 68417.m00335 AAA-type ATPase family protein contains... 72 1e-12
At1g53780.1 68414.m06120 26S proteasome AAA-ATPase subunit, puta... 72 1e-12
At1g53750.1 68414.m06115 26S proteasome AAA-ATPase subunit (RPT1... 72 1e-12
At3g05530.1 68416.m00606 26S proteasome AAA-ATPase subunit (RPT5... 71 2e-12
At3g27120.1 68416.m03393 spastin ATPase, putative similar to SWI... 71 2e-12
At1g45000.1 68414.m05158 26S proteasome regulatory complex subun... 71 3e-12
At5g64580.1 68418.m08116 AAA-type ATPase family protein similar ... 70 4e-12
At2g27600.1 68415.m03346 AAA-type ATPase family protein / vacuol... 70 4e-12
At1g80350.1 68414.m09406 katanin 1 (KTN1) identical to katanin 1... 70 5e-12
At1g02890.1 68414.m00256 AAA-type ATPase family protein contains... 69 7e-12
At5g15250.1 68418.m01786 FtsH protease, putative similar to FtsH... 69 9e-12
At5g03340.1 68418.m00286 cell division cycle protein 48, putativ... 69 1e-11
At3g09840.1 68416.m01174 cell division cycle protein 48 (CDC48A)... 69 1e-11
At5g43010.1 68418.m05245 26S proteasome AAA-ATPase subunit (RPT4... 68 2e-11
At1g09100.1 68414.m01016 26S protease regulatory subunit 6A, put... 68 2e-11
At3g53230.1 68416.m05865 cell division cycle protein 48, putativ... 67 3e-11
At2g45500.1 68415.m05659 AAA-type ATPase family protein similar ... 67 3e-11
At2g03670.1 68415.m00326 AAA-type ATPase family protein contains... 66 7e-11
At5g58290.1 68418.m07297 26S proteasome AAA-ATPase subunit (RPT3... 66 9e-11
At2g18540.1 68415.m02160 cupin family protein contains Pfam prof... 65 1e-10
At1g05910.1 68414.m00620 cell division cycle protein 48-related ... 65 1e-10
At2g29080.1 68415.m03535 FtsH protease, putative similar to AAA-... 65 2e-10
At1g03000.1 68414.m00271 AAA-type ATPase family protein contains... 64 2e-10
At2g26140.1 68415.m03137 FtsH protease, putative contains simila... 64 3e-10
At2g20140.1 68415.m02353 26S protease regulatory complex subunit... 64 3e-10
At4g29040.1 68417.m04153 26S proteasome AAA-ATPase subunit (RPT2... 63 5e-10
At2g34560.2 68415.m04246 katanin, putative similar to katanin p6... 63 6e-10
At2g34560.1 68415.m04245 katanin, putative similar to katanin p6... 63 6e-10
At3g02450.1 68416.m00232 cell division protein ftsH, putative si... 62 1e-09
At5g53170.1 68418.m06610 FtsH protease, putative similar to ATP-... 61 2e-09
At1g07510.1 68414.m00804 FtsH protease, putative similar to AAA-... 61 2e-09
At1g62130.1 68414.m07010 AAA-type ATPase family protein contains... 61 3e-09
At1g06430.1 68414.m00680 FtsH protease, putative similar to zinc... 61 3e-09
At3g01610.1 68416.m00092 AAA-type ATPase family protein contains... 59 1e-08
At2g30950.1 68415.m03775 FtsH protease (VAR2) identical to zinc ... 58 2e-08
At5g42270.1 68418.m05145 FtsH protease, putative similar to FtsH... 57 4e-08
At1g50250.1 68414.m05634 cell division protein ftsH homolog 1, c... 57 4e-08
At5g20000.1 68418.m02380 26S proteasome AAA-ATPase subunit, puta... 56 5e-08
At5g19990.1 68418.m02379 26S proteasome AAA-ATPase subunit (RPT6a) 56 5e-08
At5g58870.1 68418.m07376 FtsH protease, putative contains simila... 55 2e-07
At2g22795.1 68415.m02704 expressed protein 55 2e-07
At3g15120.1 68416.m01913 AAA-type ATPase family protein contains... 54 4e-07
At3g16290.1 68416.m02056 FtsH protease, putative contains simila... 53 5e-07
At5g04890.1 68418.m00513 small heat shock-like protein (RTM2) si... 52 9e-07
At3g47060.1 68416.m05110 FtsH protease, putative contains simila... 51 2e-06
At4g04910.1 68417.m00714 AAA-type ATPase family protein similar ... 49 8e-06
At3g28770.1 68416.m03591 expressed protein 49 1e-05
At5g55820.1 68418.m06956 expressed protein 48 2e-05
At5g53350.1 68418.m06630 ATP-dependent Clp protease ATP-binding ... 48 2e-05
At4g23940.1 68417.m03443 FtsH protease, putative contains simila... 48 2e-05
At1g10890.1 68414.m01251 F-box family protein contains Pfam PF00... 48 2e-05
At1g33360.1 68414.m04129 ATP-dependent Clp protease ATP-binding ... 47 3e-05
At1g25540.1 68414.m03171 phytochrome and flowering time regulato... 47 4e-05
At3g12550.1 68416.m01562 XH/XS domain-containing protein / XS zi... 45 2e-04
At4g36520.1 68417.m05185 trichohyalin-related low similarity to ... 44 2e-04
At5g08470.1 68418.m00999 peroxisome biogenesis protein (PEX1) id... 44 4e-04
At5g13340.1 68418.m01535 expressed protein 43 5e-04
At4g11420.1 68417.m01840 eukaryotic translation initiation facto... 43 5e-04
At2g35330.1 68415.m04332 zinc finger (C3HC4-type RING finger) pr... 43 5e-04
At1g03080.1 68414.m00282 kinase interacting family protein simil... 43 5e-04
At1g76810.1 68414.m08938 eukaryotic translation initiation facto... 43 7e-04
At1g65470.1 68414.m07427 chromatin assembly factor-1 (FASCIATA1)... 43 7e-04
At1g18410.1 68414.m02299 kinesin motor protein-related similar t... 43 7e-04
At4g32551.1 68417.m04633 WD-40 repeat family protein (LEUNIG) co... 42 0.001
At4g11100.1 68417.m01802 expressed protein 42 0.001
At1g76720.1 68414.m08929 eukaryotic translation initiation facto... 42 0.001
At5g49840.1 68418.m06172 ATP-dependent Clp protease ATP-binding ... 42 0.002
At5g44180.1 68418.m05406 homeobox transcription factor, putative... 42 0.002
At3g50370.1 68416.m05508 expressed protein 41 0.003
At1g80790.1 68414.m09479 XH/XS domain-containing protein / XS zi... 41 0.003
At1g79280.1 68414.m09242 expressed protein weak similarity to Nu... 41 0.003
At2g45460.1 68415.m05654 forkhead-associated domain-containing p... 40 0.004
At1g79830.1 68414.m09326 expressed protein weak similarity to TA... 40 0.004
At1g21160.1 68414.m02646 eukaryotic translation initiation facto... 40 0.004
At5g57120.1 68418.m07132 expressed protein weak similarity to SP... 40 0.005
At4g24710.1 68417.m03536 AAA-type ATPase family protein similar ... 40 0.005
At1g13120.1 68414.m01521 expressed protein contains Prosite PS00... 40 0.005
At5g66620.1 68418.m08397 LIM domain-containing protein contains ... 40 0.007
At4g36700.1 68417.m05208 cupin family protein low similarity to ... 40 0.007
At2g22610.1 68415.m02680 kinesin motor protein-related 40 0.007
At4g36860.2 68417.m05227 LIM domain-containing protein low simil... 39 0.009
At1g66840.1 68414.m07597 expressed protein contains Pfam profile... 39 0.009
At5g23890.1 68418.m02806 expressed protein weak similarity to SP... 39 0.012
At3g57150.1 68416.m06363 dyskerin, putative / nucleolar protein ... 39 0.012
At1g63300.1 68414.m07156 expressed protein similar to Intracellu... 39 0.012
At1g13790.1 68414.m01619 XH/XS domain-containing protein / XS zi... 39 0.012
At1g13220.2 68414.m01534 nuclear matrix constituent protein-rela... 39 0.012
At1g13220.1 68414.m01533 nuclear matrix constituent protein-rela... 39 0.012
At1g01660.1 68414.m00084 U-box domain-containing protein 39 0.012
At5g52550.1 68418.m06525 expressed protein 38 0.015
At5g28300.1 68418.m03436 trihelix DNA-binding protein, putative ... 38 0.015
At1g60200.1 68414.m06781 splicing factor PWI domain-containing p... 38 0.015
At1g29570.1 68414.m03616 zinc finger protein-related contains si... 38 0.015
At1g24460.1 68414.m03081 myosin-related contains TIGRFAM TIGR016... 38 0.015
At3g50940.1 68416.m05577 AAA-type ATPase family protein contains... 38 0.020
At5g60030.1 68418.m07527 expressed protein 38 0.027
At4g33390.1 68417.m04746 hypothetical protein contains Pfam prof... 38 0.027
At3g30450.1 68416.m03852 hypothetical protein similar to At2g049... 38 0.027
At3g07780.1 68416.m00949 expressed protein 38 0.027
At2g46180.1 68415.m05742 intracellular protein transport protein... 38 0.027
At4g40020.1 68417.m05666 hypothetical protein 37 0.035
At4g27980.1 68417.m04014 expressed protein 37 0.035
At4g11080.1 68417.m01800 high mobility group (HMG1/2) family pro... 37 0.035
At3g58840.1 68416.m06558 expressed protein 37 0.035
At3g50930.1 68416.m05576 AAA-type ATPase family protein contains... 37 0.035
At3g20350.1 68416.m02578 expressed protein 37 0.035
At5g32440.1 68418.m03825 expressed protein 37 0.047
At5g24880.1 68418.m02946 expressed protein ; expression supporte... 37 0.047
At4g31570.1 68417.m04483 expressed protein 37 0.047
At4g27595.1 68417.m03964 protein transport protein-related low s... 37 0.047
At3g13190.2 68416.m01651 myosin heavy chain-related contains wea... 37 0.047
At3g13190.1 68416.m01650 myosin heavy chain-related contains wea... 37 0.047
At2g27750.1 68415.m03363 nucleolar matrix protein-related contai... 37 0.047
At1g79150.1 68414.m09229 expressed protein ; expression supporte... 37 0.047
At1g77470.1 68414.m09021 replication factor C 36 kDA, putative s... 37 0.047
At1g55255.1 68414.m06311 zinc finger (C3HC4-type RING finger) fa... 37 0.047
At1g20920.1 68414.m02619 DEAD box RNA helicase, putative similar... 37 0.047
At1g10320.1 68414.m01162 U2 snRNP auxiliary factor-related simil... 37 0.047
At5g52410.2 68418.m06502 expressed protein 36 0.062
At5g52410.1 68418.m06503 expressed protein 36 0.062
At1g72250.1 68414.m08353 kinesin motor protein-related 36 0.062
At1g32530.1 68414.m04014 zinc finger (C3HC4-type RING finger) fa... 36 0.062
At5g62090.2 68418.m07793 expressed protein 36 0.081
At5g62090.1 68418.m07792 expressed protein 36 0.081
At5g41790.1 68418.m05088 COP1-interactive protein 1 / CIP1 almos... 36 0.081
At5g40340.1 68418.m04894 PWWP domain-containing protein KED, Nic... 36 0.081
At4g09940.1 68417.m01627 avirulence-responsive family protein / ... 36 0.081
At3g54670.1 68416.m06049 structural maintenance of chromosomes (... 36 0.081
At3g47270.1 68416.m05135 hypothetical protein similar to At2g049... 36 0.081
At3g29800.1 68416.m03792 AAA-type ATPase family contains Pfam pr... 36 0.081
At3g12190.1 68416.m01520 hypothetical protein 36 0.081
At3g10180.1 68416.m01219 kinesin motor protein-related similar t... 36 0.081
At2g34730.1 68415.m04265 myosin heavy chain-related low similari... 36 0.081
At2g06210.2 68415.m00683 phosphoprotein-related low similarity t... 36 0.081
At2g06210.1 68415.m00684 phosphoprotein-related low similarity t... 36 0.081
At1g67230.1 68414.m07652 expressed protein 36 0.081
At1g20970.1 68414.m02625 adhesin-related contains TIGRFAM TIGR01... 36 0.081
At1g03830.1 68414.m00364 guanylate-binding family protein contai... 36 0.081
At5g67320.1 68418.m08490 WD-40 repeat family protein strong simi... 36 0.11
At5g40450.1 68418.m04905 expressed protein 36 0.11
At5g27230.1 68418.m03248 expressed protein ; expression support... 36 0.11
At5g20730.3 68418.m02464 auxin-responsive factor (ARF7) identica... 36 0.11
At5g20730.2 68418.m02463 auxin-responsive factor (ARF7) identica... 36 0.11
At5g20730.1 68418.m02462 auxin-responsive factor (ARF7) identica... 36 0.11
At4g03580.1 68417.m00493 hypothetical protein 36 0.11
At3g52860.1 68416.m05825 expressed protein 36 0.11
At3g25690.1 68416.m03197 hydroxyproline-rich glycoprotein family... 36 0.11
At3g04960.1 68416.m00538 expressed protein low similarity to SP|... 36 0.11
At1g80810.1 68414.m09481 expressed protein similar to androgen-i... 36 0.11
At1g68790.1 68414.m07863 expressed protein 36 0.11
At1g65010.1 68414.m07368 expressed protein similar to endosome-a... 36 0.11
At1g28420.1 68414.m03494 homeobox transcription factor, putative... 36 0.11
At1g05320.1 68414.m00539 myosin-related similar to non-muscle my... 36 0.11
At5g61550.1 68418.m07724 protein kinase family protein contains ... 35 0.14
At5g57200.1 68418.m07145 epsin N-terminal homology (ENTH) domain... 35 0.14
At5g40010.1 68418.m04852 AAA-type ATPase family protein contains... 35 0.14
At5g14270.1 68418.m01669 DNA-binding bromodomain-containing prot... 35 0.14
At4g32190.1 68417.m04581 centromeric protein-related low similar... 35 0.14
At4g08580.1 68417.m01410 microfibrillar-associated protein-relat... 35 0.14
At2g31370.2 68415.m03834 bZIP transcription factor (POSF21) iden... 35 0.14
At2g31370.1 68415.m03833 bZIP transcription factor (POSF21) iden... 35 0.14
At2g18193.1 68415.m02117 AAA-type ATPase family protein contains... 35 0.14
At1g22930.1 68414.m02866 T-complex protein 11 contains Pfam PF05... 35 0.14
At1g22260.1 68414.m02782 expressed protein 35 0.14
At1g17440.2 68414.m02133 transcription initiation factor IID (TF... 35 0.14
At1g17440.1 68414.m02132 transcription initiation factor IID (TF... 35 0.14
At5g55860.1 68418.m06963 expressed protein contains Pfam profile... 35 0.19
At5g53020.1 68418.m06585 expressed protein 35 0.19
At5g17730.1 68418.m02079 AAA-type ATPase family protein contains... 35 0.19
At4g03000.2 68417.m00408 expressed protein contains similarity t... 35 0.19
At4g03000.1 68417.m00407 expressed protein contains similarity t... 35 0.19
At4g02710.1 68417.m00366 kinase interacting family protein simil... 35 0.19
At3g48670.2 68416.m05314 XH/XS domain-containing protein / XS zi... 35 0.19
At3g48670.1 68416.m05313 XH/XS domain-containing protein / XS zi... 35 0.19
At2g44860.1 68415.m05585 60S ribosomal protein L24, putative 35 0.19
At2g26570.1 68415.m03187 expressed protein contains Pfam profile... 35 0.19
At2g15270.1 68415.m01741 expressed protein 35 0.19
At2g14140.1 68415.m01575 hypothetical protein similar to At2g049... 35 0.19
At1g29000.1 68414.m03546 heavy-metal-associated domain-containin... 35 0.19
At1g21810.1 68414.m02729 expressed protein 35 0.19
At5g65770.1 68418.m08276 nuclear matrix constituent protein-rela... 34 0.25
At5g64910.1 68418.m08165 expressed protein ; expression support... 34 0.25
At5g27120.1 68418.m03237 SAR DNA-binding protein, putative stron... 34 0.25
At4g23800.1 68417.m03422 high mobility group (HMG1/2) family pro... 34 0.25
At4g20160.1 68417.m02949 expressed protein ; expression supporte... 34 0.25
At4g14330.1 68417.m02207 phragmoplast-associated kinesin-related... 34 0.25
At4g00380.1 68417.m00052 XH/XS domain-containing protein / XS zi... 34 0.25
At3g13200.1 68416.m01652 Cwf15 / Cwc15 cell cycle control family... 34 0.25
At1g24290.1 68414.m03065 AAA-type ATPase family protein similar ... 34 0.25
At5g17760.2 68418.m02083 AAA-type ATPase family protein contains... 34 0.33
At5g17760.1 68418.m02082 AAA-type ATPase family protein contains... 34 0.33
At5g17740.1 68418.m02080 AAA-type ATPase family protein h-bcs1, ... 34 0.33
At4g37820.1 68417.m05351 expressed protein Kaposi's sarcoma-asso... 34 0.33
At4g25940.1 68417.m03731 epsin N-terminal homology (ENTH) domain... 34 0.33
At4g25520.1 68417.m03680 transcriptional co-regulator family pro... 34 0.33
At4g19190.1 68417.m02832 zinc knuckle (CCHC-type) family protein... 34 0.33
At3g28600.1 68416.m03570 AAA-type ATPase family protein contains... 34 0.33
At3g28570.1 68416.m03567 AAA-type ATPase family protein contains... 34 0.33
At3g09620.1 68416.m01141 DEAD/DEAH box helicase, putative simila... 34 0.33
At2g27170.1 68415.m06029 structural maintenance of chromosomes (... 34 0.33
At2g18190.1 68415.m02116 AAA-type ATPase family protein contains... 34 0.33
At2g04970.1 68415.m00518 hypothetical protein similar to At2g152... 34 0.33
At1g56660.1 68414.m06516 expressed protein 34 0.33
At1g30330.1 68414.m03709 auxin-responsive factor (ARF6) identica... 34 0.33
At1g22530.1 68414.m02814 SEC14 cytosolic factor family protein /... 34 0.33
At5g60530.1 68418.m07590 late embryogenesis abundant protein-rel... 33 0.43
At5g57480.1 68418.m07183 AAA-type ATPase family protein contains... 33 0.43
At5g54410.1 68418.m06777 hypothetical protein 33 0.43
At5g43310.1 68418.m05293 COP1-interacting protein-related contai... 33 0.43
At5g17900.1 68418.m02099 expressed protein 33 0.43
At5g08010.1 68418.m00932 expressed protein condensin subunit SMC... 33 0.43
At5g03710.1 68418.m00331 hypothetical protein 33 0.43
At4g30250.1 68417.m04301 AAA-type ATPase family protein contains... 33 0.43
At4g27500.1 68417.m03950 expressed protein non-consensus GA dono... 33 0.43
At3g61260.1 68416.m06856 DNA-binding family protein / remorin fa... 33 0.43
At3g15950.1 68416.m02017 DNA topoisomerase-related similar to DN... 33 0.43
At3g05060.1 68416.m00549 SAR DNA-binding protein, putative stron... 33 0.43
At2g16640.1 68415.m01910 chloroplast outer membrane protein, put... 33 0.43
At2g03150.1 68415.m00268 ATP/GTP-binding protein family contains... 33 0.43
At1g72390.1 68414.m08373 expressed protein 33 0.43
At1g43910.1 68414.m05066 AAA-type ATPase family protein contains... 33 0.43
At1g12150.1 68414.m01407 expressed protein contains Pfam profile... 33 0.43
At5g67630.1 68418.m08527 DNA helicase, putative similar to RuvB-... 33 0.57
At5g62410.1 68418.m07832 SMC2-like condensin, putative (SMC2) (T... 33 0.57
At5g48600.1 68418.m06011 structural maintenance of chromosomes (... 33 0.57
At5g33393.1 68418.m03983 hypothetical protein 33 0.57
At5g16790.1 68418.m01966 expressed protein 33 0.57
At4g21020.1 68417.m03041 late embryogenesis abundant domain-cont... 33 0.57
At4g13540.1 68417.m02111 expressed protein 33 0.57
At4g10790.1 68417.m01759 UBX domain-containing protein low simil... 33 0.57
At3g58660.1 68416.m06538 60S ribosomal protein-related contains ... 33 0.57
At3g28610.1 68416.m03571 AAA-type ATPase family protein contains... 33 0.57
At3g28510.1 68416.m03561 AAA-type ATPase family protein contains... 33 0.57
At3g20550.1 68416.m02601 forkhead-associated domain-containing p... 33 0.57
At3g20150.1 68416.m02554 kinesin motor family protein contains P... 33 0.57
At2g25670.2 68415.m03077 expressed protein 33 0.57
At2g25670.1 68415.m03076 expressed protein 33 0.57
At2g18750.1 68415.m02183 calmodulin-binding protein similar to c... 33 0.57
At1g73170.1 68414.m08466 expressed protein 33 0.57
At1g16800.1 68414.m02018 tRNA-splicing endonuclease positive eff... 33 0.57
At5g26610.2 68418.m03181 D111/G-patch domain-containing protein ... 33 0.76
At5g26610.1 68418.m03180 D111/G-patch domain-containing protein ... 33 0.76
At5g20470.1 68418.m02433 myosin, putative similar to PIR|T00727 ... 33 0.76
At5g17750.1 68418.m02081 AAA-type ATPase family protein contains... 33 0.76
At5g10010.1 68418.m01159 expressed protein 33 0.76
At4g38070.1 68417.m05377 bHLH family protein contains Pfam profi... 33 0.76
At4g24170.1 68417.m03468 kinesin motor family protein contains P... 33 0.76
At3g54870.1 68416.m06079 armadillo/beta-catenin repeat family pr... 33 0.76
At3g28320.1 68416.m03538 hypothetical protein similar to At14a (... 33 0.76
At3g10680.1 68416.m01284 heat shock protein-related contains wea... 33 0.76
At3g02930.1 68416.m00288 expressed protein ; expression support... 33 0.76
At1g68150.1 68414.m07785 WRKY family transcription factor simila... 33 0.76
At1g44900.1 68414.m05144 DNA replication licensing factor, putat... 33 0.76
At1g15200.1 68414.m01817 protein-protein interaction regulator f... 33 0.76
At1g08730.1 68414.m00969 myosin heavy chain (PCR43) identical to... 33 0.76
At5g61150.2 68418.m07672 leo1-like family protein weak similarit... 32 1.0
At5g61150.1 68418.m07671 leo1-like family protein weak similarit... 32 1.0
At5g53800.1 68418.m06685 expressed protein 32 1.0
At5g42880.1 68418.m05226 hypothetical protein contains Pfam prof... 32 1.0
At5g40000.1 68418.m04851 AAA-type ATPase family protein BCS1 nuc... 32 1.0
At4g01180.1 68417.m00156 XH/XS domain-containing protein contain... 32 1.0
At3g07190.1 68416.m00857 expressed protein 32 1.0
At2g30500.1 68415.m03715 kinase interacting family protein simil... 32 1.0
At2g19710.1 68415.m02303 expressed protein contains Pfam profi... 32 1.0
At1g72410.1 68414.m08374 COP1-interacting protein-related simila... 32 1.0
At1g31440.1 68414.m03850 SH3 domain-containing protein 1 (SH3P1)... 32 1.0
At1g11690.1 68414.m01342 hypothetical protein 32 1.0
At5g66640.1 68418.m08399 LIM domain-containing protein-related c... 32 1.3
At5g47680.1 68418.m05886 expressed protein contains Pfam profile... 32 1.3
At5g45230.1 68418.m05551 disease resistance protein (TIR-NBS-LRR... 32 1.3
At5g22320.1 68418.m02604 leucine-rich repeat family protein cont... 32 1.3
At5g15920.1 68418.m01862 structural maintenance of chromosomes (... 32 1.3
At5g10660.1 68418.m01234 calmodulin-binding protein-related cont... 32 1.3
At5g08450.2 68418.m00996 expressed protein KED, Nicotiana tabacu... 32 1.3
At5g08450.1 68418.m00995 expressed protein KED, Nicotiana tabacu... 32 1.3
At5g07660.1 68418.m00877 structural maintenance of chromosomes (... 32 1.3
At4g26630.1 68417.m03837 expressed protein 32 1.3
At4g16790.1 68417.m02536 hydroxyproline-rich glycoprotein family... 32 1.3
At4g08710.1 68417.m01439 hypothetical protein contains Pfam prof... 32 1.3
At1g67120.1 68414.m07636 midasin-related similar to Midasin (MID... 32 1.3
At1g32490.1 68414.m04009 RNA helicase, putative similar to ATP-d... 32 1.3
At1g22275.1 68414.m02784 expressed protein 32 1.3
At1g15780.1 68414.m01893 expressed protein 32 1.3
At1g06070.1 68414.m00636 bZIP transcription factor, putative (bZ... 32 1.3
At5g46020.1 68418.m05659 expressed protein 31 1.8
At5g42020.2 68418.m05116 luminal binding protein 2 (BiP-2) (BP2)... 31 1.8
At5g42020.1 68418.m05115 luminal binding protein 2 (BiP-2) (BP2)... 31 1.8
At5g38840.1 68418.m04698 forkhead-associated domain-containing p... 31 1.8
At5g28540.1 68418.m03480 luminal binding protein 1 (BiP-1) (BP1)... 31 1.8
At5g26350.1 68418.m03150 hypothetical protein 31 1.8
At5g17890.1 68418.m02098 LIM domain-containing protein / disease... 31 1.8
At5g16730.1 68418.m01959 expressed protein weak similarity to mi... 31 1.8
At5g06110.1 68418.m00679 DNAJ heat shock N-terminal domain-conta... 31 1.8
At4g39160.1 68417.m05546 myb family transcription factor contain... 31 1.8
At4g25835.1 68417.m03716 AAA-type ATPase family protein contains... 31 1.8
At4g24970.1 68417.m03578 ATP-binding region, ATPase-like domain-... 31 1.8
At3g47460.1 68416.m05161 SMC2-like condensin, putative similar t... 31 1.8
At3g16000.1 68416.m02024 matrix-localized MAR DNA-binding protei... 31 1.8
At3g11450.1 68416.m01396 DNAJ heat shock N-terminal domain-conta... 31 1.8
At2g46620.1 68415.m05815 AAA-type ATPase family protein contains... 31 1.8
At1g55080.1 68414.m06291 expressed protein 31 1.8
At1g17580.1 68414.m02165 myosin, putative similar to myosin GI:4... 31 1.8
At1g14610.1 68414.m01737 valyl-tRNA synthetase / valine--tRNA li... 31 1.8
At1g12430.1 68414.m01436 armadillo/beta-catenin repeat family pr... 31 1.8
At1g04850.1 68414.m00481 ubiquitin-associated (UBA)/TS-N domain-... 31 1.8
At5g65900.1 68418.m08295 DEAD/DEAH box helicase, putative contai... 31 2.3
At5g47210.1 68418.m05821 nuclear RNA-binding protein, putative s... 31 2.3
At4g20880.1 68417.m03028 ethylene-responsive nuclear protein / e... 31 2.3
At4g12770.1 68417.m02004 auxilin-related low similarity to SP|Q2... 31 2.3
At3g60380.1 68416.m06753 expressed protein 31 2.3
At3g11330.1 68416.m01378 leucine-rich repeat family protein 31 2.3
At2g33793.1 68415.m04145 expressed protein 31 2.3
At2g18220.1 68415.m02123 expressed protein contains Pfam domain ... 31 2.3
At2g14050.1 68415.m01563 minichromosome maintenance family prote... 31 2.3
At1g33960.1 68414.m04209 avirulence-responsive protein / avirule... 31 2.3
At1g19220.1 68414.m02392 transcriptional factor B3 family protei... 31 2.3
At1g17140.2 68414.m02089 tropomyosin-related similar to Tropomyo... 31 2.3
At1g17140.1 68414.m02088 tropomyosin-related similar to Tropomyo... 31 2.3
At1g15910.1 68414.m01908 XH/XS domain-containing protein / XS zi... 31 2.3
At1g12080.1 68414.m01396 expressed protein 31 2.3
At5g59210.2 68418.m07421 myosin heavy chain-related contains wea... 31 3.1
At5g59210.1 68418.m07420 myosin heavy chain-related contains wea... 31 3.1
At5g56360.1 68418.m07034 calmodulin-binding protein similar to a... 31 3.1
At5g48690.1 68418.m06025 hypothetical protein 31 3.1
At5g46400.1 68418.m05711 expressed protein 31 3.1
At5g25870.1 68418.m03069 hypothetical protein 31 3.1
At5g09620.1 68418.m01113 octicosapeptide/Phox/Bem1p (PB1) domain... 31 3.1
At5g01380.1 68418.m00051 expressed protein 31 3.1
At4g13630.1 68417.m02121 expressed protein contains Pfam profile... 31 3.1
At4g09950.1 68417.m01628 avirulence-responsive family protein / ... 31 3.1
At4g05380.1 68417.m00820 AAA-type ATPase family protein contains... 31 3.1
At3g51640.1 68416.m05663 expressed protein 31 3.1
At3g22790.1 68416.m02873 kinase interacting family protein simil... 31 3.1
At3g06660.1 68416.m00784 PAPA-1-like family protein / zinc finge... 31 3.1
At3g05270.1 68416.m00575 expressed protein similar to endosome-a... 31 3.1
At3g02950.1 68416.m00290 expressed protein 31 3.1
At3g02810.1 68416.m00273 protein kinase family protein contains ... 31 3.1
At2g32240.1 68415.m03940 expressed protein contains Pfam profile... 31 3.1
At1g76770.1 68414.m08934 heat shock protein-related contains sim... 31 3.1
At1g64690.1 68414.m07333 expressed protein 31 3.1
At1g56040.1 68414.m06434 U-box domain-containing protein contain... 31 3.1
At1g30320.1 68414.m03708 remorin family protein contains Pfam do... 31 3.1
At1g26670.1 68414.m03249 vesical transport v-SNARE 12 (VTI12) / ... 31 3.1
At1g13330.1 68414.m01547 expressed protein similar to nuclear re... 31 3.1
At1g11720.1 68414.m01345 starch synthase, putative strong simila... 31 3.1
At1g07140.1 68414.m00760 Ran-binding protein 1a (RanBP1a) identi... 31 3.1
At5g59390.1 68418.m07442 XH/XS domain-containing protein contain... 30 4.0
At5g41140.1 68418.m05001 expressed protein 30 4.0
At5g13130.1 68418.m01504 hypothetical protein low similarity to ... 30 4.0
At4g15130.1 68417.m02324 cholinephosphate cytidylyltransferase, ... 30 4.0
At4g12780.1 68417.m02005 auxilin-related low similarity to SP|Q2... 30 4.0
At3g47910.1 68416.m05224 expressed protein low similarity to non... 30 4.0
At3g47620.1 68416.m05184 TCP family transcription factor, putati... 30 4.0
At3g28580.1 68416.m03568 AAA-type ATPase family protein contains... 30 4.0
At2g34780.1 68415.m04270 expressed protein 30 4.0
At2g26820.1 68415.m03218 avirulence-responsive family protein / ... 30 4.0
At2g22140.1 68415.m02630 expressed protein ; expression supporte... 30 4.0
At1g76820.1 68414.m08939 expressed protein 30 4.0
At1g76780.1 68414.m08935 expressed protein ; expression supporte... 30 4.0
At1g73860.1 68414.m08552 kinesin motor protein-related similar t... 30 4.0
At1g60640.1 68414.m06826 expressed protein 30 4.0
At1g28450.1 68414.m03497 MADS-box family protein similar to MADS... 30 4.0
At5g62550.1 68418.m07850 expressed protein 30 5.4
At5g54070.1 68418.m06731 heat shock transcription factor family ... 30 5.4
At5g23750.1 68418.m02786 remorin family protein contains Pfam do... 30 5.4
At5g17510.1 68418.m02054 expressed protein 30 5.4
At5g16720.1 68418.m01958 expressed protein contains Pfam profile... 30 5.4
At5g05210.1 68418.m00555 nucleolar matrix protein-related contai... 30 5.4
At5g01310.1 68418.m00043 basic helix-loop-helix (bHLH) family pr... 30 5.4
At4g18060.1 68417.m02687 SH3 domain-containing protein 3 (SH3P3)... 30 5.4
At3g51650.1 68416.m05664 expressed protein 30 5.4
At3g10670.1 68416.m01283 ABC transporter family protein similar ... 30 5.4
At2g42480.1 68415.m05255 meprin and TRAF homology domain-contain... 30 5.4
At2g25320.1 68415.m03029 meprin and TRAF homology domain-contain... 30 5.4
At2g19385.1 68415.m02261 expressed protein weak similarity to Ce... 30 5.4
At1g33950.1 68414.m04208 avirulence-responsive family protein / ... 30 5.4
At1g24300.1 68414.m03066 GYF domain-containing protein contains ... 30 5.4
At5g60340.1 68418.m07564 maoC-like dehydratase domain-containing... 29 7.1
At5g57410.1 68418.m07172 expressed protein 29 7.1
At5g23750.2 68418.m02787 remorin family protein contains Pfam do... 29 7.1
At5g22330.1 68418.m02605 TATA box-binding protein-interacting pr... 29 7.1
At4g38170.1 68417.m05389 far-red impaired responsive protein, pu... 29 7.1
At4g37090.1 68417.m05254 expressed protein 29 7.1
At4g29750.1 68417.m04237 expressed protein contains Pfam domain,... 29 7.1
At4g27120.2 68417.m03898 expressed protein 29 7.1
At4g27120.1 68417.m03897 expressed protein 29 7.1
At3g28540.1 68416.m03564 AAA-type ATPase family protein contains... 29 7.1
At3g22830.1 68416.m02877 heat shock transcription factor family ... 29 7.1
At3g15560.1 68416.m01972 expressed protein 29 7.1
At3g07250.1 68416.m00863 nuclear transport factor 2 (NTF2) famil... 29 7.1
At3g02860.2 68416.m00279 expressed protein 29 7.1
At3g02860.1 68416.m00278 expressed protein 29 7.1
At2g39320.1 68415.m04827 OTU-like cysteine protease family prote... 29 7.1
At2g38580.1 68415.m04739 expressed protein ; expression supporte... 29 7.1
At2g37420.1 68415.m04589 kinesin motor protein-related 29 7.1
At2g21440.1 68415.m02551 RNA recognition motif (RRM)-containing ... 29 7.1
At1g75310.1 68414.m08748 DNAJ heat shock N-terminal domain-conta... 29 7.1
At1g68370.1 68414.m07809 gravity-responsive protein / altered re... 29 7.1
At1g65950.1 68414.m07483 ABC1 family protein contains Pfam domai... 29 7.1
At1g63160.1 68414.m07138 replication factor C 40 kDa, putative s... 29 7.1
At1g44910.1 68414.m05146 FF domain-containing protein / WW domai... 29 7.1
At1g30690.1 68414.m03752 SEC14 cytosolic factor family protein /... 29 7.1
At1g29320.1 68414.m03584 transducin family protein / WD-40 repea... 29 7.1
At1g09080.1 68414.m01013 luminal binding protein 3 (BiP-3) (BP3)... 29 7.1
At1g06720.1 68414.m00714 expressed protein contains Pfam domain,... 29 7.1
At5g66030.2 68418.m08315 Golgi-localized GRIP domain-containing ... 29 9.4
At5g66030.1 68418.m08314 Golgi-localized GRIP domain-containing ... 29 9.4
At5g65180.2 68418.m08199 expressed protein contains Pfam domain,... 29 9.4
At5g65180.1 68418.m08198 expressed protein contains Pfam domain,... 29 9.4
At5g44280.1 68418.m05420 zinc finger (C3HC4-type RING finger) fa... 29 9.4
At5g26860.1 68418.m03204 Lon protease homolog 2, mitochondrial a... 29 9.4
At5g07820.1 68418.m00896 expressed protein 29 9.4
At5g04540.1 68418.m00454 expressed protein 29 9.4
At4g33740.2 68417.m04791 expressed protein 29 9.4
At4g33740.1 68417.m04790 expressed protein 29 9.4
At4g32610.1 68417.m04643 mitochondrial glycoprotein family prote... 29 9.4
At4g14150.1 68417.m02183 phragmoplast-associated kinesin-related... 29 9.4
At4g12740.1 68417.m02001 adenine-DNA glycosylase-related / MYH-r... 29 9.4
At4g02810.1 68417.m00381 expressed protein 29 9.4
At3g58220.1 68416.m06491 meprin and TRAF homology domain-contain... 29 9.4
At3g53350.3 68416.m05888 myosin heavy chain-related low similari... 29 9.4
At3g53350.2 68416.m05887 myosin heavy chain-related low similari... 29 9.4
At3g53350.1 68416.m05886 myosin heavy chain-related low similari... 29 9.4
At3g50240.1 68416.m05494 kinesin motor protein-related KINESIN-L... 29 9.4
At3g49830.1 68416.m05448 DNA helicase-related similar to DNA hel... 29 9.4
At3g19670.1 68416.m02492 FF domain-containing protein / WW domai... 29 9.4
At3g18480.1 68416.m02348 CCAAT displacement protein-related / CD... 29 9.4
At3g15920.1 68416.m02013 phox (PX) domain-containing protein wea... 29 9.4
At3g05110.1 68416.m00555 hypothetical protein 29 9.4
At2g39300.1 68415.m04825 expressed protein ; expression supporte... 29 9.4
At2g37290.1 68415.m04574 RabGAP/TBC domain-containing protein lo... 29 9.4
At2g07680.1 68415.m00992 ABC transporter family protein 29 9.4
At1g74250.1 68414.m08599 DNAJ heat shock N-terminal domain-conta... 29 9.4
At1g43850.1 68414.m05052 SEUSS transcriptional co-regulator iden... 29 9.4
At1g21690.2 68414.m02715 replication factor C 37 kDa, putative S... 29 9.4
At1g21690.1 68414.m02714 replication factor C 37 kDa, putative S... 29 9.4
At1g20760.1 68414.m02600 calcium-binding EF hand family protein ... 29 9.4
At1g20696.1 68414.m02593 high mobility group protein beta2 (HMGb... 29 9.4
>At5g16930.1 68418.m01984 AAA-type ATPase family protein contains
Pfam domain, PF00004: ATPase, AAA family
Length = 644
Score = 344 bits (845), Expect = 1e-94
Identities = 196/547 (35%), Positives = 306/547 (55%), Gaps = 26/547 (4%)
Query: 47 FDSSALERAASAAKELERSRHAKDALELSKLQESTRQQEQMAKIKEYEAAIEQAKVEQKK 106
FD ALER A A K + S HAK E K +E TRQ E AK +E++A QA+ E+++
Sbjct: 86 FDPEALERGAKALKGINNSAHAKKVFESIKTREETRQAEFTAKAQEFKAMQSQAEAERQR 145
Query: 107 VDYEERRKTLQEETKQHQMRAQYQDQLAKKRYEEQLVQQQKSQEEILRKQEESVAKQEAL 166
V YEE++K Q + + A+Y+D+LA+KR + + Q+ +E+++ QEES ++E
Sbjct: 146 VIYEEQKKLAQHQAQTKSQMARYEDELARKRMQAENEAQRTRNQELVKMQEESAIRREVA 205
Query: 167 RRATIEHEMEL------REKNKLXXXXXXXXXXXXXXXXNR------DINLEQIRLKAAE 214
RRAT E E++ REK ++ R D+N + +A
Sbjct: 206 RRAT-EEEIQAQRRQTEREKAEIERETIRVKAMAEAEGRARESKLSEDVNRRMLVDRANA 264
Query: 215 NRVTILESIKTAGSVVGSGLNALVTDWDKTXXXXXXXXXXXXXVYSAKGATSVAARFIEA 274
R + +I T +G GL ++TD +K +Y+ + V +++
Sbjct: 265 EREKWVSAINTTFDHIGGGLRTILTDQNKLIVAVGGLTALAAGIYTTREGAKVIWSYVDR 324
Query: 275 RIGKPTLVNETSR--FSLGEAVKHPILTV-SKAVSSFRKPQDALAGVVLAPNLEQRLRDI 331
+G+P+L+ E+SR + + + T+ S K V+L P LE+R+ +
Sbjct: 325 ILGQPSLIRESSRGKYPWSGSASRVLSTLRGGGKESTSKTGKGFGDVILRPALEKRIEQL 384
Query: 332 AIATKNTRLNKGFYRNLLMYGPPGTGKTLFSKKLAKHSGMDYAIMTGGDVAPMGKDAVAA 391
A AT NT+ ++ +RN+L YGPPGTGKT+ +++LA+ SG+DYA+MTGGDVAP+G AV
Sbjct: 385 ANATANTKAHQAPFRNILFYGPPGTGKTMAARELARRSGLDYALMTGGDVAPLGAQAVTK 444
Query: 392 IHKVFDWANTSRKGVLVFIDEADAFLRKRSSEKISEDLRAALNAFLYRTSDQSSRIMLVL 451
IH++FDW+ S++G+L+FIDEADAFL +R+ +SE R+ALNA L+RT DQS I+L L
Sbjct: 445 IHQLFDWSKKSKRGLLLFIDEADAFLCERNKTYMSEAQRSALNALLFRTGDQSKDIVLAL 504
Query: 452 ASNTPQQFDSAINDRLDKMIEFGLPALEERERLIRLYFDKFV----------LQPASEGK 501
A+N P DSA+ DR+D+ +EF LP EER +L+ LY +K++ LQ + +
Sbjct: 505 ATNRPGDLDSAVADRIDETLEFPLPGEEERFKLLNLYLEKYISKTNLKKPGLLQSLFKKE 564
Query: 502 RRLSVDQFDYGALCSTLATRTAGMSGRALSKLGVAWQAAAYASDDGRLTEQMCIDICDDA 561
++ + L A +T G SGR ++KL + QAA Y S + L + ++ D
Sbjct: 565 QQTIEIKGVTEDLLKEAAAKTKGFSGREIAKLMASVQAAVYGSANCLLDANLFREVIDYK 624
Query: 562 VRDHRQK 568
V +H+Q+
Sbjct: 625 VAEHQQR 631
>At3g03060.1 68416.m00302 AAA-type ATPase family protein contains a
ATP/GTP-binding site motif A (P-loop), PROSITE:PS00017
Length = 639
Score = 335 bits (823), Expect = 6e-92
Identities = 194/564 (34%), Positives = 310/564 (54%), Gaps = 33/564 (5%)
Query: 47 FDSSALERAASAAKELERSRHAKDALELSKLQESTRQQEQMAKIKEYEAAIEQAKVEQKK 106
FD ALER A A KE+ S +AK E K QE T+Q E K +E++A QA+ E+ K
Sbjct: 76 FDPEALERGAKALKEINHSSYAKKVFESIKQQEETKQTEFATKAQEFKAMQAQAETERHK 135
Query: 107 VDYEERRKTLQEETKQHQMRAQYQDQLAKKRYE-----EQLVQQQKSQ------EEILRK 155
V Y+E++K Q + + A+Y+D LA+KR + +Q +++ +E+++
Sbjct: 136 VIYDEQKKLAQHQAQTKSQMARYEDDLARKRMQACKSSKQFFNTAENEFHRTRNQELVKM 195
Query: 156 QEESVAKQEALRRAT---IEHEMELREKNKLXXXXXXXXXXXXXXXXNR--------DIN 204
QE+S +QE RRAT I+ + E+ K R D+N
Sbjct: 196 QEDSAIRQEQARRATEEQIQAQRRQTEREKAEIERETIRVKAIAEAEGRAHEARLAEDVN 255
Query: 205 LEQIRLKAAENRVTILESIKTAGSVVGSGLNALVTDWDKTXXXXXXXXXXXXXVYSAKGA 264
+ +A R + +I T +G GL A++TD +K +Y+ +
Sbjct: 256 RRMLVDRANAEREKWVAAINTTFDHIGGGLRAILTDQNKLIVAVGGVTALAAGIYTTREG 315
Query: 265 TSVAARFIEARIGKPTLVNETSRFSLG-EAVKHPILTVSKAVSSFRKPQDALAGVVLAPN 323
V +++ +G+P+L+ E+SR +++ + S K V+L P
Sbjct: 316 AKVIWSYVDRILGQPSLIRESSRGKYPWSGSLSRVMSTLRGKESASKNGKRFGDVILHPP 375
Query: 324 LEQRLRDIAIATKNTRLNKGFYRNLLMYGPPGTGKTLFSKKLAKHSGMDYAIMTGGDVAP 383
L +R+ +A +T NT+L++ +RN+L++GPPGTGKT+ +++LA+ SG+DYA+MTGGDVAP
Sbjct: 376 LAKRIEHLATSTANTKLHQAPFRNILLHGPPGTGKTMAARELARKSGLDYALMTGGDVAP 435
Query: 384 MGKDAVAAIHKVFDWANTSRKGVLVFIDEADAFLRKRSSEKISEDLRAALNAFLYRTSDQ 443
+G AV IH++FDW S++G+L+FIDEADAFL +R+ +SE R+ALNA L+RT DQ
Sbjct: 436 LGAQAVTKIHELFDWGKKSKRGLLLFIDEADAFLCERNKTYMSEAQRSALNALLFRTGDQ 495
Query: 444 SSRIMLVLASNTPQQFDSAINDRLDKMIEFGLPALEERERLIRLYFDKFVLQ--PASEG- 500
S I+L LA+N P DSA+ DR+D+++EF LP EER +L+ LY +K++ + P+ G
Sbjct: 496 SKDIVLALATNRPGDLDSAVADRVDEVLEFPLPGEEERFKLLNLYLEKYIAEAGPSKPGL 555
Query: 501 ------KRRLSVD-QFDYGALCSTLATRTAGMSGRALSKLGVAWQAAAYASDDGRLTEQM 553
K + ++ + L A +T G SGR ++KL + QAA Y S+D L +
Sbjct: 556 FDRLFKKEQQKIEIKGVTEELLKEAAAKTEGFSGREIAKLMASVQAAVYGSEDCVLDSML 615
Query: 554 CIDICDDAVRDHRQKMEWLSAEEK 577
++ D V +H+Q+ + + K
Sbjct: 616 FREVVDYKVAEHQQRRKLAGVDSK 639
>At2g18330.1 68415.m02136 AAA-type ATPase family protein contains
Pfam profile: PF00004 ATPase family associated with
various cellular activities (AAA)
Length = 636
Score = 320 bits (786), Expect = 2e-87
Identities = 195/576 (33%), Positives = 316/576 (54%), Gaps = 39/576 (6%)
Query: 31 STNLSKSERKA----MEAYRFDSSALERAASAAKELERSRHAKDALELSKLQESTRQQEQ 86
S++ SKSE K + FD +LER A A +E+ S H+K +L + QE TR E
Sbjct: 52 SSSNSKSETKPDSDEPKGSGFDPESLERGAKALREINSSPHSKQVFDLMRKQEKTRLAEL 111
Query: 87 MAKIKEYEAAIEQAK-VEQKKVDYEERRKTLQEETKQHQMRAQYQDQLAKKRYEEQLVQQ 145
A+ KE+ AI+ +K +E+++ E++R +Q++ + +Y+D+LA+KR + Q
Sbjct: 112 AAE-KEHNEAIQASKDIERQRKLAEDQRNLVQQQAQAKAQNLRYEDELARKRMQTDNEAQ 170
Query: 146 QKSQEEILRKQEESVAKQEALRRATIEHEMELREKNKLXXXXXXXXXXXXXXXXNRDINL 205
++ E++ QE S ++E R AT E + + + +
Sbjct: 171 RRHNAELVSMQEASSIRKEKARIATEEQIQAQQRETEKERAELERETIRVKAMAEAEGRA 230
Query: 206 EQIRLKAAENRVTILE-----------SIKTAGSVVGSGLNALVTDWDKTXXXXXXXXXX 254
+ +L +NR +L+ +I T S + G+ L+TD K
Sbjct: 231 HEAKLTEEQNRRMLLDKINGEREKWLAAINTTFSHIEGGVRTLLTDRSKLIMTVGGVTAL 290
Query: 255 XXXVYSAKGATSVAARFIEARIGKPTLVNETS--RFSLGEAV---KHPILTVSKAVSSFR 309
VY+ + V +I +G+P+L+ E+S RF +V K+ + T + A +S
Sbjct: 291 AAGVYTTREGARVTWGYINRILGQPSLIRESSMGRFPWAGSVSQFKNKLSTAAGAAAS-A 349
Query: 310 KPQDALAGVVLAPNLEQRLRDIAIATKNTRLNKGFYRNLLMYGPPGTGKTLFSKKLAKHS 369
+ + L V+L +L+ R+ +A AT NT+ +K +RN++ YGPPGTGKT+ ++++A+ S
Sbjct: 350 EGEKPLENVILHRSLKTRIERLARATANTKSHKAPFRNMMFYGPPGTGKTMVAREIARKS 409
Query: 370 GMDYAIMTGGDVAPMGKDAVAAIHKVFDWANTSRKGVLVFIDEADAFLRKRSSEKISEDL 429
G+DYA+MTGGDVAP+G AV IH++FDWA S KG+L+FIDEADAFL +R+S +SE
Sbjct: 410 GLDYAMMTGGDVAPLGAQAVTKIHEIFDWAKKSNKGLLLFIDEADAFLCERNSTYMSEAQ 469
Query: 430 RAALNAFLYRTSDQSSRIMLVLASNTPQQFDSAINDRLDKMIEFGLPALEERERLIRLYF 489
R+ALNA L+RT DQS I+LVLA+N P DSA+ DR+D++IEF LP EER +L++LY
Sbjct: 470 RSALNALLFRTGDQSRDIVLVLATNRPGDLDSAVTDRIDEVIEFPLPGEEERFKLLKLYL 529
Query: 490 DKFVLQPASEGKR----------------RLSVDQFDYGALCSTLATRTAGMSGRALSKL 533
+K+++ +G++ +++++ + A +T G SGR ++KL
Sbjct: 530 NKYLMGDDKKGEKDSNLKWSNLFKKKKSQKITIEGDLTDQVIKEAAKKTEGFSGREIAKL 589
Query: 534 GVAWQAAAYASDDGRLTEQMCIDICDDAVRDHRQKM 569
QAA Y D L Q+ +I D + +H Q++
Sbjct: 590 VAGVQAAVYGRQDCVLDSQLFEEIVDYKIEEHHQRI 625
>At4g36580.1 68417.m05193 AAA-type ATPase family protein contains
Pfam domain, PF00004: ATPase, AAA family ('A'TPases
'A'ssociated with diverse cellular 'A'ctivities)
Length = 620
Score = 303 bits (745), Expect = 2e-82
Identities = 185/558 (33%), Positives = 302/558 (54%), Gaps = 19/558 (3%)
Query: 28 AAPSTNLSKSERKAMEAYRFDSSALERAASAAKELERSRHAKDALELSKLQESTRQQEQM 87
A S++ SK+E + FD ALERAA A +++ S H+K +L + QE TR E
Sbjct: 51 ANQSSSKSKAEPDEPKGSGFDPEALERAAKALRDINSSPHSKQVFDLMRKQEKTRLAELT 110
Query: 88 AKIKEYEAAIEQAKVEQKKVDYEERRKTLQEETKQHQMRAQYQDQLAKKRYEEQLVQQQK 147
A+ YEA + +++ E++R LQ + + +Y+D+LA+KR + Q+
Sbjct: 111 AETSHYEAIQAHNDIGRQQKLAEDQRNLLQTQAQTKAQNLRYEDELARKRQQTDHEAQRH 170
Query: 148 SQEEILRKQEESVAKQEALRRATIEHEMELREKNKLXXXXXXXXXXXXXXXXNRDINLEQ 207
E+++ QE S ++E + AT E + + + +
Sbjct: 171 HNVELVKMQEASSIRKEKAKIATEEQIQAQHRQTEKERAELERETIRVKAMAEAEGRAHE 230
Query: 208 IRLKAAENRVTILESIKTAGSVVGSGLNALVTDWDKTXXXXXXXXXXXXXVYSAKGATSV 267
+L +NR ++E I + +N + + + + + GAT++
Sbjct: 231 AKLTEEQNRRLLMERINGEREKWLAAINTMFSHIE--GGFRTLLTDRNKLIMTVGGATAL 288
Query: 268 AARFIEAR-IGKPTLVNETS--RFSLGEAVKHPILTVS-KAVSSFRKPQDALAGVVLAPN 323
AA R +G+P+L+ E+S RF +V +S A +S + + L V+L +
Sbjct: 289 AAGVYTTRMLGQPSLIRESSMRRFPWTGSVSQFKNRISGAAAASAAEGKKPLDNVILHTS 348
Query: 324 LEQRLRDIAIATKNTRLNKGFYRNLLMYGPPGTGKTLFSKKLAKHSGMDYAIMTGGDVAP 383
L++R+ +A AT NT+ ++ +RN++ YGPPGTGKT+ ++++A+ SG+DYA+MTGGDVAP
Sbjct: 349 LKKRIERLARATANTKSHQAPFRNMMFYGPPGTGKTMVAREIARKSGLDYAMMTGGDVAP 408
Query: 384 MGKDAVAAIHKVFDWANTSRKGVLVFIDEADAFLRKRSSEKISEDLRAALNAFLYRTSDQ 443
+G AV IH++FDWA S KG+L+FIDEADAFL +R+S +SE R+ALNA L+RT DQ
Sbjct: 409 LGSQAVTKIHQIFDWAKKSNKGLLLFIDEADAFLCERNSTYMSEAQRSALNALLFRTGDQ 468
Query: 444 SSRIMLVLASNTPQQFDSAINDRLDKMIEFGLPALEERERLIRLYFDKFV--------LQ 495
S I+LVLA+N DSA+ DR+D++IEF LP EER +L+ LY +K++ +
Sbjct: 469 SRDIVLVLATNRRGDLDSAVTDRIDEVIEFPLPGEEERFKLLNLYLNKYLKMGDNNEDTK 528
Query: 496 PA-----SEGKRRLSVDQFDYGALCSTLATRTAGMSGRALSKLGVAWQAAAYASDDGRLT 550
P + ++++V++ + S A +T G SGR ++KL QA Y D L
Sbjct: 529 PKWSHLFKKLSQKITVEEDLTDKVISEAAKKTEGFSGREIAKLVAGVQAGVYGRADCVLD 588
Query: 551 EQMCIDICDDAVRDHRQK 568
Q+ +I + V +H ++
Sbjct: 589 SQLFKEIVEYKVEEHHRR 606
>At5g53540.1 68418.m06653 MSP1 protein, putative /
intramitochondrial sorting protein, putative similar to
Swiss-Prot:P28737 MSP1 protein (TAT-binding homolog 4)
[Saccharomyces cerevisiae]; contains Pfam domain,
PF00004: ATPase, AAA family
Length = 403
Score = 81.0 bits (191), Expect = 2e-15
Identities = 47/149 (31%), Positives = 83/149 (55%), Gaps = 5/149 (3%)
Query: 343 GFYRNLLMYGPPGTGKTLFSKKLAKHSGMDYA-IMTGGDVAPMGKDAVAAIHKVFDWANT 401
G + +L+YGPPGTGKT+ +K +A+ S + + ++ DA + VF A
Sbjct: 120 GPQKGVLLYGPPGTGKTMLAKAIARESEAVFINVKVSNLMSKWFGDAQKLVSAVFSLAYK 179
Query: 402 SRKGVLVFIDEADAFLRKRSS---EKISEDLRAALNAFLYRTSDQSSRIMLVLASNTPQQ 458
+ + +FIDE D+FL +R S E +S + + T+DQ++R+M++ A+N P +
Sbjct: 180 LQPAI-IFIDEVDSFLGQRRSTDNEAMSNMKTEFMALWDGFTTDQNARVMVLAATNRPSE 238
Query: 459 FDSAINDRLDKMIEFGLPALEERERLIRL 487
D AI R + E G+P +ER +++++
Sbjct: 239 LDEAILRRFPQSFEIGMPDCQERAQILKV 267
>At1g50140.1 68414.m05623 AAA-type ATPase family protein contains
Pfam domain, PF00004: ATPase, AAA family
Length = 640
Score = 80.6 bits (190), Expect = 3e-15
Identities = 48/148 (32%), Positives = 78/148 (52%), Gaps = 6/148 (4%)
Query: 346 RNLLMYGPPGTGKTLFSKKLAKHSGMDYAIMTGGDV-APMGKDAVAAIHKVFDWANTSRK 404
+ +L++GPPGTGKTL +K LA +G ++ +TG + + DA +F +A T
Sbjct: 387 KGILLFGPPGTGKTLLAKALATEAGANFISITGSTLTSKWFGDAEKLTKALFSFA-TKLA 445
Query: 405 GVLVFIDEADAFLRKRSSEKISEDLRAALNAFLYR----TSDQSSRIMLVLASNTPQQFD 460
V++F+DE D+ L R E R N F+ S S RI+++ A+N P D
Sbjct: 446 PVIIFVDEIDSLLGARGGSSEHEATRRMRNEFMAAWDGLRSKDSQRILILGATNRPFDLD 505
Query: 461 SAINDRLDKMIEFGLPALEERERLIRLY 488
A+ RL + I LP E R ++++++
Sbjct: 506 DAVIRRLPRRIYVDLPDAENRLKILKIF 533
>At1g64110.2 68414.m07264 AAA-type ATPase family protein contains
Pfam domain, PF00004: ATPase, AAA family
Length = 829
Score = 80.2 bits (189), Expect = 4e-15
Identities = 47/152 (30%), Positives = 81/152 (53%), Gaps = 8/152 (5%)
Query: 346 RNLLMYGPPGTGKTLFSKKLAKHSGMDYAIMTGGDVAP--MGKDAVAAIHKVFDWANTSR 403
R +L++GPPGTGKT+ +K +AK +G + ++ + G+D + +F A+
Sbjct: 556 RGILLFGPPGTGKTMLAKAIAKEAGASFINVSMSTITSKWFGEDE-KNVRALFTLASKVS 614
Query: 404 KGVLVFIDEADAFLRKRSSEKISEDLRAALNAFLYR----TSDQSSRIMLVLASNTPQQF 459
++F+DE D+ L +R+ E +R N F+ + RI+++ A+N P
Sbjct: 615 P-TIIFVDEVDSMLGQRTRVGEHEAMRKIKNEFMSHWDGLMTKPGERILVLAATNRPFDL 673
Query: 460 DSAINDRLDKMIEFGLPALEERERLIRLYFDK 491
D AI R ++ I GLPA+E RE+++R K
Sbjct: 674 DEAIIRRFERRIMVGLPAVENREKILRTLLAK 705
>At1g64110.1 68414.m07263 AAA-type ATPase family protein contains
Pfam domain, PF00004: ATPase, AAA family
Length = 824
Score = 80.2 bits (189), Expect = 4e-15
Identities = 47/152 (30%), Positives = 81/152 (53%), Gaps = 8/152 (5%)
Query: 346 RNLLMYGPPGTGKTLFSKKLAKHSGMDYAIMTGGDVAP--MGKDAVAAIHKVFDWANTSR 403
R +L++GPPGTGKT+ +K +AK +G + ++ + G+D + +F A+
Sbjct: 551 RGILLFGPPGTGKTMLAKAIAKEAGASFINVSMSTITSKWFGEDE-KNVRALFTLASKVS 609
Query: 404 KGVLVFIDEADAFLRKRSSEKISEDLRAALNAFLYR----TSDQSSRIMLVLASNTPQQF 459
++F+DE D+ L +R+ E +R N F+ + RI+++ A+N P
Sbjct: 610 P-TIIFVDEVDSMLGQRTRVGEHEAMRKIKNEFMSHWDGLMTKPGERILVLAATNRPFDL 668
Query: 460 DSAINDRLDKMIEFGLPALEERERLIRLYFDK 491
D AI R ++ I GLPA+E RE+++R K
Sbjct: 669 DEAIIRRFERRIMVGLPAVENREKILRTLLAK 700
>At4g28000.1 68417.m04016 AAA-type ATPase family protein contains
Pfam domain, PF00004: ATPase, AAA family
Length = 726
Score = 79.4 bits (187), Expect = 7e-15
Identities = 46/152 (30%), Positives = 80/152 (52%), Gaps = 8/152 (5%)
Query: 346 RNLLMYGPPGTGKTLFSKKLAKHSGMDYAIMTGGDVAP--MGKDAVAAIHKVFDWANTSR 403
R +L++GPPGTGKT+ +K +A +G + ++ + G+D + +F A
Sbjct: 449 RGILLFGPPGTGKTMMAKAIANEAGASFINVSMSTITSKWFGEDE-KNVRALFTLA-AKV 506
Query: 404 KGVLVFIDEADAFLRKRSSEKISEDLRAALNAFLYR----TSDQSSRIMLVLASNTPQQF 459
++F+DE D+ L +R+ E +R N F+ S+ RI+++ A+N P
Sbjct: 507 SPTIIFVDEVDSMLGQRTRVGEHEAMRKIKNEFMTHWDGLMSNAGDRILVLAATNRPFDL 566
Query: 460 DSAINDRLDKMIEFGLPALEERERLIRLYFDK 491
D AI R ++ I GLP++E RE+++R K
Sbjct: 567 DEAIIRRFERRIMVGLPSVESREKILRTLLSK 598
>At4g04180.1 68417.m00593 AAA-type ATPase family protein contains
Pfam domain, PF00004: ATPase, AAA family
Length = 609
Score = 79.4 bits (187), Expect = 7e-15
Identities = 51/174 (29%), Positives = 88/174 (50%), Gaps = 5/174 (2%)
Query: 318 VVLAPNLEQRLRDIAIATKNTRLNKGFYRNLLMYGPPGTGKTLFSKKLAKHSGMDYA-IM 376
+++A + + DI T++ + R +L GPPGTGKT ++ +A +G+ +
Sbjct: 335 ILMALHSPEVYDDIVRGTRS-KFESNRPRAVLFEGPPGTGKTSCARVIANQAGIPLLYVP 393
Query: 377 TGGDVAPMGKDAVAAIHKVFDWANTSRKGVLVFIDEADAFLRKRSSEKISEDLRAALNAF 436
++ ++ + VF AN G ++F+DE DAF R SE + E R L+
Sbjct: 394 LEAVMSKYYGESERLLGAVFSQANELPDGAIIFLDEIDAFAISRDSE-MHEATRRVLSVL 452
Query: 437 LYRTS--DQSSRIMLVLASNTPQQFDSAINDRLDKMIEFGLPALEERERLIRLY 488
L + +Q +++++ A+N Q D A+ R D MI F LP L+ R+ +I Y
Sbjct: 453 LRQIDGFEQEKKVVVIAATNRKQDLDPALISRFDSMIMFDLPDLQTRQEIIAQY 506
>At4g27680.1 68417.m03980 MSP1 protein, putative /
intramitochondrial sorting protein, putative similar to
Swiss-Prot:P28737 MSP1 protein (TAT-binding homolog 4)
[Saccharomyces cerevisiae]; contains Pfam domain,
PF00004: ATPase, AAA family
Length = 398
Score = 78.2 bits (184), Expect = 2e-14
Identities = 45/149 (30%), Positives = 81/149 (54%), Gaps = 5/149 (3%)
Query: 343 GFYRNLLMYGPPGTGKTLFSKKLAKHSGMDYA-IMTGGDVAPMGKDAVAAIHKVFDWANT 401
G + +L+YGPPGTGKT+ +K +AK SG + + ++ DA + VF A
Sbjct: 117 GPQKGVLLYGPPGTGKTMLAKAIAKESGAVFINVRVSNLMSKWFGDAQKLVSAVFSLAYK 176
Query: 402 SRKGVLVFIDEADAFL--RKRSSEKISEDLRAALNAFLYR-TSDQSSRIMLVLASNTPQQ 458
+ + +FIDE ++FL R+ + + +++ A ++D +R+M++ A+N P +
Sbjct: 177 LQPAI-IFIDEVESFLGQRRSTDHEAMANMKTEFMALWDGFSTDPHARVMVLAATNRPSE 235
Query: 459 FDSAINDRLDKMIEFGLPALEERERLIRL 487
D AI RL + E G+P ER ++++
Sbjct: 236 LDEAILRRLPQAFEIGIPDRRERAEILKV 264
>At3g19740.1 68416.m02499 AAA-type ATPase family protein contains
Pfam domain, PF00004: ATPase, AAA family
Length = 439
Score = 77.8 bits (183), Expect = 2e-14
Identities = 47/148 (31%), Positives = 78/148 (52%), Gaps = 6/148 (4%)
Query: 346 RNLLMYGPPGTGKTLFSKKLAKHSGMDYAIMTGGDV-APMGKDAVAAIHKVFDWANTSRK 404
+ +L++GPPGTGKTL +K LA +G ++ +TG + + DA +F +A +
Sbjct: 186 KGILLFGPPGTGKTLLAKALATEAGANFISITGSTLTSKWFGDAEKLTKALFSFA-SKLA 244
Query: 405 GVLVFIDEADAFLRKRSSEKISEDLRAALNAFLYR----TSDQSSRIMLVLASNTPQQFD 460
V++F+DE D+ L R E R N F+ S S RI+++ A+N P D
Sbjct: 245 PVIIFVDEVDSLLGARGGAFEHEATRRMRNEFMAAWDGLRSKDSQRILILGATNRPFDLD 304
Query: 461 SAINDRLDKMIEFGLPALEERERLIRLY 488
A+ RL + I LP E R ++++++
Sbjct: 305 DAVIRRLPRRIYVDLPDAENRLKILKIF 332
>At3g56690.1 68416.m06306 calmodulin-binding protein identical to
calmodulin-binding protein GI:6760428 from [Arabidopsis
thaliana]
Length = 1022
Score = 76.2 bits (179), Expect = 6e-14
Identities = 51/169 (30%), Positives = 97/169 (57%), Gaps = 11/169 (6%)
Query: 328 LRDI--AIATKNTRLNKGFY--RNLLMYGPPGTGKTLFSKKLAKHSGMDYAIMTGGD-VA 382
LRDI + + KN+ + G + +L++GPPGTGKT ++ A+HSG+++ + G + ++
Sbjct: 397 LRDIIDSSSIKNSLSSLGLRPTKGVLIHGPPGTGKTSLARTFARHSGVNFFSVNGPEIIS 456
Query: 383 PMGKDAVAAIHKVFDWANTSRKGVLVFIDEADAF--LRKRSSEKISEDLRAALNAFLYRT 440
++ A+ +VF A+ + V VFID+ DA RK E++S+ + A L +
Sbjct: 457 QYLGESEKALDEVFRSASNATPAV-VFIDDLDAIAPARKEGGEELSQRMVATLLNLMDGI 515
Query: 441 SDQSSRIMLVLASNTPQQFDSAIN--DRLDKMIEFGLPALEERERLIRL 487
S ++ ++++ A+N P + A+ RLD+ IE G+P+ +R ++ +
Sbjct: 516 S-RTDGVVVIAATNRPDSIEPALRRPGRLDREIEIGVPSSTQRSDILHI 563
Score = 56.8 bits (131), Expect = 4e-08
Identities = 37/151 (24%), Positives = 79/151 (52%), Gaps = 9/151 (5%)
Query: 348 LLMYGPPGTGKTLFSKKLAKHSGMDYAIMTGGDV-APMGKDAVAAIHKVFDWANTSRKGV 406
+LM+GPPG KTL ++ +A + +++ + G ++ + ++ A+ +F A + +
Sbjct: 761 ILMFGPPGCSKTLMARAVASEAKLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSI 820
Query: 407 LVFIDEAD--AFLRKRSSEKISEDLRAALNAFLYRTSDQSSR--IMLVLASNTPQQFDSA 462
+F DE D A +R + ++ +S R ++ L R + ++ A+N P + DSA
Sbjct: 821 -IFFDEIDSLASIRGKENDGVSVSDR-VMSQLLVELDGLHQRVGVTVIAATNRPDKIDSA 878
Query: 463 I--NDRLDKMIEFGLPALEERERLIRLYFDK 491
+ R D+++ G P +RE +++++ K
Sbjct: 879 LLRPGRFDRLLYVGPPNETDREAILKIHLRK 909
>At1g79560.1 68414.m09275 FtsH protease, putative contains
similarity to chloroplast FtsH protease GI:5804782 from
[Nicotiana tabacum]
Length = 1008
Score = 75.8 bits (178), Expect = 8e-14
Identities = 68/229 (29%), Positives = 110/229 (48%), Gaps = 31/229 (13%)
Query: 344 FYRNLLMYGPPGTGKTLFSKKLAKHSGMDYAIMTGGDVAPMGKDAVAAIHKVFDWANTSR 403
F R +L+ GPPGTGKTLF++ LAK SG+ + +G + K A I+++F A +
Sbjct: 525 FVRGVLLSGPPGTGKTLFARTLAKESGLPFVFASGAEFTDSEKSGAAKINEMFSIARRNA 584
Query: 404 KGVLVFIDEADAF----LRKRSSEKIS-EDLRAALNAFLYRTS-DQSS---RIMLVLASN 454
VF+DE DA RK + + E L A L+ +T D+ S ++ + A+N
Sbjct: 585 P-AFVFVDEIDAIAGRHARKDPRRRATFEALIAQLDGEKEKTGIDRFSLRQAVIFICATN 643
Query: 455 TPQQFDSAI--NDRLDKMIEFGLPALEERERLIRLYFDKFVLQPASEGKRRLSVDQFDYG 512
P + D + R+D+ + GLP ++R ++ ++ S GK + D+G
Sbjct: 644 RPDELDLEFVRSGRIDRRLYIGLPDAKQRVQIFGVH---------SAGKN--LAEDIDFG 692
Query: 513 ALCSTLATRTAGMSGRALSKLGVAWQAAAYASDDGR--LTEQMCIDICD 559
L RT G SG + L +AA + GR + +Q +D+ D
Sbjct: 693 ----KLVFRTVGFSGADIRNL--VNEAAIMSVRKGRSYIYQQDIVDVLD 735
>At4g24860.1 68417.m03559 AAA-type ATPase family protein contains Pfam
profile PF00004: ATPase, AAA family
Length = 1122
Score = 73.3 bits (172), Expect = 4e-13
Identities = 59/240 (24%), Positives = 103/240 (42%), Gaps = 6/240 (2%)
Query: 346 RNLLMYGPPGTGKTLFSKKLAKHSGMDYA-IMTGGDVAPMGKDAVAAIHKVFDWANTSRK 404
+ +L++GPPGTGKT+ +K +AK + ++ I + + + VF A+
Sbjct: 856 KGILLFGPPGTGKTMLAKAVAKEADANFINISMSSITSKWFGEGEKYVKAVFSLASKMSP 915
Query: 405 GVLVFIDEADAFLRKRSSEKISEDLRAALNAFLYR----TSDQSSRIMLVLASNTPQQFD 460
V +F+DE D+ L +R + E R N F+ T+ + R++++ A+N P D
Sbjct: 916 SV-IFVDEVDSMLGRREHPREHEASRKIKNEFMMHWDGLTTQERERVLVLAATNRPFDLD 974
Query: 461 SAINDRLDKMIEFGLPALEERERLIRLYFDKFVLQPASEGKRRLSVDQFDYGALCSTLAT 520
A+ RL + + GLP R ++++ K L P + S+ G+ L
Sbjct: 975 EAVIRRLPRRLMVGLPDTSNRAFILKVILAKEDLSPDLDIGEIASMTNGYSGSDLKNLCV 1034
Query: 521 RTAGMSGRALSKLGVAWQAAAYASDDGRLTEQMCIDICDDAVRDHRQKMEWLSAEEKSRS 580
A + + + + AA A D+ V D R +W+SA S S
Sbjct: 1035 TAAHRPIKEILEKEKRERDAALAQGKVPPPLSGSSDLRALNVEDFRDAHKWVSASVSSES 1094
>At4g02480.1 68417.m00335 AAA-type ATPase family protein contains Pfam
domain, PF00004: ATPase, AAA family; similar to Spastin
(Swiss-Prot:Q9UBP0) [Homo sapiens] and Spastin (Fragment)
(Swiss-Prot:Q9QYY8) [Mus musculus]; similar to
mitochondrial sorting protein 1 (MSP1) protein
(TAT-binding homolog 4) (Swiss-Prot:P28737)
[Saccharomyces cerevisiae]
Length = 1265
Score = 72.1 bits (169), Expect = 1e-12
Identities = 69/305 (22%), Positives = 128/305 (41%), Gaps = 16/305 (5%)
Query: 283 NETSRFSLGEAVKHPILTVS-KAVSSFRKPQDALAGVVLAPNLEQRLRDIAIATKNTRLN 341
NE + L + + + VS + + ++ L +V+ P L D TK T+
Sbjct: 942 NEFEKKLLSDVIPPSDIGVSFDDIGALENVKETLKELVMLPLQRPELFDKGQLTKPTK-- 999
Query: 342 KGFYRNLLMYGPPGTGKTLFSKKLAKHSGMDYA-IMTGGDVAPMGKDAVAAIHKVFDWAN 400
+L++GPPGTGKT+ +K +A +G ++ I + + + VF A+
Sbjct: 1000 -----GILLFGPPGTGKTMLAKAVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLAS 1054
Query: 401 TSRKGVLVFIDEADAFLRKRSSEKISEDLRAALNAFL-----YRTSDQSSRIMLVLASNT 455
V +F+DE D+ L +R + E +R N F+ RT D+ R++++ A+N
Sbjct: 1055 KIAPSV-IFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLRTKDR-ERVLVLAATNR 1112
Query: 456 PQQFDSAINDRLDKMIEFGLPALEERERLIRLYFDKFVLQPASEGKRRLSVDQFDYGALC 515
P D A+ RL + + LP R +++ + K + P + + ++ G+
Sbjct: 1113 PFDLDEAVIRRLPRRLMVNLPDATNRSKILSVILAKEEIAPDVDLEAIANMTDGYSGSDL 1172
Query: 516 STLATRTAGMSGRALSKLGVAWQAAAYASDDGRLTEQMCIDICDDAVRDHRQKMEWLSAE 575
L A R + + + AA A + C D+ + D + + + A
Sbjct: 1173 KNLCVTAAHFPIREILEKEKKEKTAAQAENRPTPPLYSCTDVRSLTMNDFKAAHDQVCAS 1232
Query: 576 EKSRS 580
S S
Sbjct: 1233 VSSDS 1237
>At1g53780.1 68414.m06120 26S proteasome AAA-ATPase subunit,
putative similar to 26S proteasome AAA-ATPase subunit
RPT1 SP:Q41365 from [Spinacia oleracea]
Length = 464
Score = 72.1 bits (169), Expect = 1e-12
Identities = 45/151 (29%), Positives = 82/151 (54%), Gaps = 10/151 (6%)
Query: 346 RNLLMYGPPGTGKTLFSKKLAKHSGMDYAIMTGGDVAP--MGKDAVAAIHKVFDWANTSR 403
+ +L YGPPG+GKTL ++ +A +G + + G ++ +G+ A + ++F A S+
Sbjct: 240 KGVLCYGPPGSGKTLVARAVANRTGACFIRVVGSELVQKYIGEGA-RMVRELFQMAR-SK 297
Query: 404 KGVLVFIDEADAFLRKRSSEKISED--LRAALNAFLYRTS--DQSSRIMLVLASNTPQQF 459
K ++F DE DA R + + D ++ + LY+ D I +++A+N P
Sbjct: 298 KACILFFDEIDAIGGARFDDGVGSDNEVQRTMLEILYQLDGFDARGNIKVLMATNRPDIL 357
Query: 460 DSAI--NDRLDKMIEFGLPALEERERLIRLY 488
D A+ RLD+ +EF LP LE R ++ +++
Sbjct: 358 DPALLRPGRLDRKVEFCLPDLEGRTQIFKIH 388
>At1g53750.1 68414.m06115 26S proteasome AAA-ATPase subunit (RPT1a)
similar to 26S proteasome ATPase subunit GI:1395190 from
[Spinacia oleracea]
Length = 426
Score = 72.1 bits (169), Expect = 1e-12
Identities = 44/150 (29%), Positives = 78/150 (52%), Gaps = 8/150 (5%)
Query: 346 RNLLMYGPPGTGKTLFSKKLAKHSGMDYAIMTGGD-VAPMGKDAVAAIHKVFDWANTSRK 404
+ +L YGPPGTGKTL ++ +A + + + G + V + + ++F A S+K
Sbjct: 203 KGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMAR-SKK 261
Query: 405 GVLVFIDEADAFLRKRSSEKISED--LRAALNAFLYRTS--DQSSRIMLVLASNTPQQFD 460
+VF DE DA R + + D ++ + + + D I +++A+N P D
Sbjct: 262 ACIVFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLD 321
Query: 461 SAI--NDRLDKMIEFGLPALEERERLIRLY 488
A+ RLD+ +EFGLP LE R ++ +++
Sbjct: 322 PALLRPGRLDRKVEFGLPDLESRTQIFKIH 351
>At3g05530.1 68416.m00606 26S proteasome AAA-ATPase subunit (RPT5a)
identical to GB:AAF22525 GI:6652886 from [Arabidopsis
thaliana]
Length = 424
Score = 71.3 bits (167), Expect = 2e-12
Identities = 48/158 (30%), Positives = 79/158 (50%), Gaps = 8/158 (5%)
Query: 346 RNLLMYGPPGTGKTLFSKKLAKHSGMDYAIMTGGDVAPMG-KDAVAAIHKVFDWANTSRK 404
+ +L+YGPPGTGKTL ++ A + + + G + M D + F A +
Sbjct: 206 KGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAK-EKA 264
Query: 405 GVLVFIDEADAFLRKRSSEKISED--LRAALNAFLYRTSDQSS--RIMLVLASNTPQQFD 460
++FIDE DA KR ++S D ++ + L + SS RI ++ A+N D
Sbjct: 265 PCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDERIKVIAATNRADILD 324
Query: 461 SAI--NDRLDKMIEFGLPALEERERLIRLYFDKFVLQP 496
A+ + RLD+ IEF P E R R+++++ K + P
Sbjct: 325 PALMRSGRLDRKIEFPHPTEEARARILQIHSRKMNVHP 362
>At3g27120.1 68416.m03393 spastin ATPase, putative similar to
SWISS-PROT:Q9QYY8 spastin (Fragment) [Mus musculus];
contains Pfam domain, PF00004: ATPase, AAA family
Length = 287
Score = 70.9 bits (166), Expect = 2e-12
Identities = 41/144 (28%), Positives = 70/144 (48%), Gaps = 3/144 (2%)
Query: 346 RNLLMYGPPGTGKTLFSKKLAKHSGMDYAIMTGGDVAPMGKDAVAAIHKVFDWANTSRKG 405
+ LL++GPPGTGKT+ K +A + + ++ + + + + R+
Sbjct: 44 KGLLLFGPPGTGKTMIGKAIAGEAKATFFYISASSLTSKWIGEGEKLVRALFGVASCRQP 103
Query: 406 VLVFIDEADAFLRKRSSEKISEDLRAALNAFLYRTS---DQSSRIMLVLASNTPQQFDSA 462
++F+DE D+ L +R S+ E R FL S +I+L+ A+N PQ+ D A
Sbjct: 104 AVIFVDEIDSLLSQRKSDGEHESSRRLKTQFLIEMEGFDSGSEQILLIGATNRPQELDEA 163
Query: 463 INDRLDKMIEFGLPALEERERLIR 486
RL K + LP+ E R +I+
Sbjct: 164 ARRRLTKRLYIPLPSSEARAWIIQ 187
>At1g45000.1 68414.m05158 26S proteasome regulatory complex subunit
p42D, putative similar to 26S proteasome regulatory
complex subunit p42D [Drosophila melanogaster]
gi|6434958|gb|AAF08391
Length = 399
Score = 70.5 bits (165), Expect = 3e-12
Identities = 42/150 (28%), Positives = 83/150 (55%), Gaps = 8/150 (5%)
Query: 346 RNLLMYGPPGTGKTLFSKKLAKHSGMDY-AIMTGGDVAPMGKDAVAAIHKVFDWANTSRK 404
+ +L+YGPPGTGKTL ++ +A + ++ +++ + ++ I ++F++A +
Sbjct: 174 KGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFNYAR-EHQ 232
Query: 405 GVLVFIDEADAFLRKRSSEKISED--LRAALNAFLYRTS--DQSSRIMLVLASNTPQQFD 460
++F+DE DA +R SE S D ++ L L + DQ ++ +++A+N P D
Sbjct: 233 PCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLD 292
Query: 461 SAI--NDRLDKMIEFGLPALEERERLIRLY 488
A+ RLD+ IE LP + R +++++
Sbjct: 293 PALLRPGRLDRKIEIPLPNEQSRMEILKIH 322
>At5g64580.1 68418.m08116 AAA-type ATPase family protein similar to
zinc dependent protease [Arabidopsis thaliana]
GI:7650138; contains Pfam profile PF00004: ATPase AAA
family
Length = 855
Score = 70.1 bits (164), Expect = 4e-12
Identities = 62/236 (26%), Positives = 108/236 (45%), Gaps = 18/236 (7%)
Query: 267 VAARFIEARIGKPT--LVNETSRFSLGEAVKHPILTVSKAVSSFRKPQDALAGVVLAPNL 324
+ A+ I +G PT + R +LG K + +K +S+ K +
Sbjct: 269 IYAKLIPCDLGTPTKKIRQPLKRQALGSLGK----SRAKFISAEEKTGVTFDDFAGQEYI 324
Query: 325 EQRLRDIAIATKNTR--LNKGFY--RNLLMYGPPGTGKTLFSKKLAKHSGMDYAIMTGGD 380
++ L++I KN NKG Y + +L++GPPGTGKTL +K +A +G+ + G D
Sbjct: 325 KRELQEIVRILKNDEEFQNKGIYCPKGVLLHGPPGTGKTLLAKAIAGEAGLPFFAANGTD 384
Query: 381 VAPMGKDAVAAIHKVFDWANTSRKGVLVFIDEADAFLRKRSSEKISEDLRAALNAFLYRT 440
M A+ K ++ S ++FIDE DA KR I L
Sbjct: 385 FVEMFVGVAASRVKDLFASSRSYAPSIIFIDEIDAIGSKRGGPDIGGGGAEREQGLLQIL 444
Query: 441 SDQ------SSRIMLVLASNTPQQFDSAI--NDRLDKMIEFGLPALEERERLIRLY 488
++ +S+++++ A+N D A+ R DK+I GLP+ + R +++++
Sbjct: 445 TEMDGFKVTTSQVLVIGATNRLDILDPALLRKGRFDKIIRVGLPSKDGRLAILKVH 500
>At2g27600.1 68415.m03346 AAA-type ATPase family protein / vacuolar
sorting protein-related similar to SP|P46467 SKD1
protein (Vacuolar sorting protein 4b) {Mus musculus};
contains Pfam profiles PF00004: ATPase AAA family,
PF04212: MIT domain
Length = 435
Score = 70.1 bits (164), Expect = 4e-12
Identities = 41/149 (27%), Positives = 73/149 (48%), Gaps = 7/149 (4%)
Query: 345 YRNLLMYGPPGTGKTLFSKKLAKHSGMDYAIMTGGDVAP--MGKDAVAAIHKVFDWANTS 402
+R L+YGPPGTGK+ +K +A + + ++ D+ MG ++ + +F+ A S
Sbjct: 165 WRAFLLYGPPGTGKSYLAKAVATEADSTFFSVSSSDLVSKWMG-ESEKLVSNLFEMARES 223
Query: 403 RKGVLVFIDEADAFLRKRSSEKISEDLRAALNAFLYR---TSDQSSRIMLVLASNTPQQF 459
+ +F+DE D+ R SE R L + +++++ A+NTP
Sbjct: 224 APSI-IFVDEIDSLCGTRGEGNESEASRRIKTELLVQMQGVGHNDEKVLVLAATNTPYAL 282
Query: 460 DSAINDRLDKMIEFGLPALEERERLIRLY 488
D AI R DK I LP + R+ + +++
Sbjct: 283 DQAIRRRFDKRIYIPLPEAKARQHMFKVH 311
>At1g80350.1 68414.m09406 katanin 1 (KTN1) identical to katanin 1
(KTN1) [Arabidopsis thaliana] GI:14133602
Length = 523
Score = 69.7 bits (163), Expect = 5e-12
Identities = 46/154 (29%), Positives = 78/154 (50%), Gaps = 12/154 (7%)
Query: 345 YRNLLMYGPPGTGKTLFSKKLAKHSGMDYAIMTGGDVAPMGK-DAVAAIHKVFDWANTSR 403
++ +LM+GPPGTGKTL +K +A G + ++ +A + ++ + +FD A
Sbjct: 272 WKGVLMFGPPGTGKTLLAKAVATECGTTFFNVSSATLASKWRGESERMVRCLFDLARAYA 331
Query: 404 KGVLVFIDEADAFLRKR-------SSEKISEDLRAALNAFL-YRTSDQSSR--IMLVLAS 453
+FIDE D+ R SS ++ +L ++ T++ SR +M++ A+
Sbjct: 332 PST-IFIDEIDSLCNSRGGSGEHESSRRVKSELLVQVDGVSNTATNEDGSRKIVMVLAAT 390
Query: 454 NTPQQFDSAINDRLDKMIEFGLPALEERERLIRL 487
N P D A+ RL+K I LP E R+ LI +
Sbjct: 391 NFPWDIDEALRRRLEKRIYIPLPDFESRKALINI 424
>At1g02890.1 68414.m00256 AAA-type ATPase family protein contains Pfam
domain, PF00004: ATPase, AAA family; similar to
mitochondrial sorting protein 1 (MSP1) (TAT-binding
homolog 4) (Swiss-Prot:P28737) [Saccharomyces cerevisiae]
Length = 1252
Score = 69.3 bits (162), Expect = 7e-12
Identities = 55/216 (25%), Positives = 99/216 (45%), Gaps = 16/216 (7%)
Query: 283 NETSRFSLGEAVKHPILTVSKA-VSSFRKPQDALAGVVLAPNLEQRLRDIAIATKNTRLN 341
NE + L + + + VS + + + +D L +V+ P L TK T+
Sbjct: 929 NEFEKKLLSDVIPPSDIGVSFSDIGALENVKDTLKELVMLPLQRPELFGKGQLTKPTK-- 986
Query: 342 KGFYRNLLMYGPPGTGKTLFSKKLAKHSGMDYA-IMTGGDVAPMGKDAVAAIHKVFDWAN 400
+L++GPPGTGKT+ +K +A +G ++ I + + + VF A+
Sbjct: 987 -----GILLFGPPGTGKTMLAKAVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLAS 1041
Query: 401 TSRKGVLVFIDEADAFLRKRSSEKISEDLRAALNAFL-----YRTSDQSSRIMLVLASNT 455
V +F+DE D+ L +R + E +R N F+ RT D+ R++++ A+N
Sbjct: 1042 KIAPSV-IFVDEVDSMLGRRENPGEHEAMRKMKNEFMINWDGLRTKDK-ERVLVLAATNR 1099
Query: 456 PQQFDSAINDRLDKMIEFGLPALEERERLIRLYFDK 491
P D A+ RL + + LP R +++ + K
Sbjct: 1100 PFDLDEAVIRRLPRRLMVNLPDSANRSKILSVILAK 1135
>At5g15250.1 68418.m01786 FtsH protease, putative similar to
FtsH-like protein Pftf precursor GI:4325041 from
[Nicotiana tabacum]
Length = 687
Score = 68.9 bits (161), Expect = 9e-12
Identities = 73/279 (26%), Positives = 132/279 (47%), Gaps = 29/279 (10%)
Query: 315 LAGVVLAP-NLEQRLRDIAIATKNTRLNKGFYRNLLMYGPPGTGKTLFSKKLAKHSGMDY 373
+AGV A + E+ + + K + L + +L+ GPPGTGKTL +K +A +G+ +
Sbjct: 225 VAGVDEAKQDFEEIVEFLKTPEKFSALGAKIPKGVLLTGPPGTGKTLLAKAIAGEAGVPF 284
Query: 374 AIMTGGDVAPMGKDAVAA-IHKVFDWANTSRKGVLVFIDEADAFLRKRSS--EKISEDLR 430
++G + M A+ +F+ A + +VFIDE DA R R + +++
Sbjct: 285 FSLSGSEFIEMFVGVGASRARDLFNKAK-ANSPCIVFIDEIDAVGRMRGTGIGGGNDERE 343
Query: 431 AALNAFLYRTSD--QSSRIMLVLASNTPQQFDSAI--NDRLDKMIEFGLPALEERERLIR 486
LN L ++ ++++ A+N P+ DSA+ R D+ + GLP + RE +++
Sbjct: 344 QTLNQILTEMDGFAGNTGVIVIAATNRPEILDSALLRPGRFDRQVSVGLPDIRGREEILK 403
Query: 487 LYFDKFVLQPASEGKRRLSVDQFDYGALCSTLATRTAGMSGRALSKLGVAWQAAAYASDD 546
++ S K+ D S +A RT G SG L+ L +AA A
Sbjct: 404 VH---------SRSKK------LDKDVSLSVIAMRTPGFSGADLANL--MNEAAILAGRR 446
Query: 547 GRLTEQMCIDICDDAVRDHRQKMEWLS-AEEKSRSMMPY 584
G+ +++ + DD++ ME + KS++++ Y
Sbjct: 447 GK--DKITLTEIDDSIDRIVAGMEGTKMIDGKSKAIVAY 483
>At5g03340.1 68418.m00286 cell division cycle protein 48, putative /
CDC48, putative very strong similarity to SP|P54609 Cell
division cycle protein 48 homolog {Arabidopsis
thaliana}; contains Pfam profiles PF00004: ATPase AAA
family, PF02359: Cell division protein 48 (CDC48)
N-terminal domain; supporting cDNA
gi|26449351|dbj|AK117125.1|
Length = 810
Score = 68.5 bits (160), Expect = 1e-11
Identities = 49/185 (26%), Positives = 94/185 (50%), Gaps = 11/185 (5%)
Query: 346 RNLLMYGPPGTGKTLFSKKLAKHSGMDYAIMTGGDV-APMGKDAVAAIHKVFDWANTSRK 404
+ +L+YGPPG+GKTL ++ +A +G + + G ++ + + ++ + + K F+ A +
Sbjct: 242 KGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAP 301
Query: 405 GVLVFIDEADAFLRKRSSEKISEDLRAALNAFLYRTSD---QSSRIMLVLASNTPQQFDS 461
+ +FIDE D+ KR EK + ++ + + L D + ++++ A+N P D
Sbjct: 302 SI-IFIDEIDSIAPKR--EKTNGEVERRIVSQLLTLMDGLKSRAHVIVMGATNRPNSIDP 358
Query: 462 AIN--DRLDKMIEFGLPALEERERLIRLYFDKFVLQPASEGKRRLSVDQFDY-GALCSTL 518
A+ R D+ I+ G+P R ++R++ L + R+S D Y GA + L
Sbjct: 359 ALRRFGRFDREIDIGVPDEIGRLEVLRIHTKNMKLAEDVD-LERISKDTHGYVGADLAAL 417
Query: 519 ATRTA 523
T A
Sbjct: 418 CTEAA 422
Score = 59.3 bits (137), Expect = 8e-09
Identities = 43/148 (29%), Positives = 73/148 (49%), Gaps = 8/148 (5%)
Query: 346 RNLLMYGPPGTGKTLFSKKLAKHSGMDYAIMTGGDVAPMG-KDAVAAIHKVFDWANTSRK 404
+ +L YGPPG GKTL +K +A ++ + G ++ M ++ A + ++FD A S
Sbjct: 515 KGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAP 574
Query: 405 GVLVFIDEADAFLRKR--SSEKISEDLRAALNAFLYRTSDQSSR--IMLVLASNTPQQFD 460
VL F DE D+ +R S+ LN L +++ + ++ A+N P D
Sbjct: 575 CVL-FFDELDSIATQRGNSAGDAGGAADRVLNQLLTEMDGMNAKKTVFIIGATNRPDIID 633
Query: 461 SAI--NDRLDKMIEFGLPALEERERLIR 486
SA+ RLD++I LP + R + +
Sbjct: 634 SALLRPGRLDQLIYIPLPDEDSRLNIFK 661
>At3g09840.1 68416.m01174 cell division cycle protein 48 (CDC48A)
(CDC48) identical to SP|P54609 Cell division cycle
protein 48 homolog {Arabidopsis thaliana}
Length = 809
Score = 68.5 bits (160), Expect = 1e-11
Identities = 49/185 (26%), Positives = 94/185 (50%), Gaps = 11/185 (5%)
Query: 346 RNLLMYGPPGTGKTLFSKKLAKHSGMDYAIMTGGDV-APMGKDAVAAIHKVFDWANTSRK 404
+ +L+YGPPG+GKTL ++ +A +G + + G ++ + + ++ + + K F+ A +
Sbjct: 242 KGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAP 301
Query: 405 GVLVFIDEADAFLRKRSSEKISEDLRAALNAFLYRTSD---QSSRIMLVLASNTPQQFDS 461
+ +FIDE D+ KR EK + ++ + + L D + ++++ A+N P D
Sbjct: 302 SI-IFIDEIDSIAPKR--EKTNGEVERRIVSQLLTLMDGLKSRAHVIVMGATNRPNSIDP 358
Query: 462 AIN--DRLDKMIEFGLPALEERERLIRLYFDKFVLQPASEGKRRLSVDQFDY-GALCSTL 518
A+ R D+ I+ G+P R ++R++ L + R+S D Y GA + L
Sbjct: 359 ALRRFGRFDREIDIGVPDEIGRLEVLRIHTKNMKLAEDVD-LERISKDTHGYVGADLAAL 417
Query: 519 ATRTA 523
T A
Sbjct: 418 CTEAA 422
Score = 60.1 bits (139), Expect = 4e-09
Identities = 44/149 (29%), Positives = 74/149 (49%), Gaps = 9/149 (6%)
Query: 346 RNLLMYGPPGTGKTLFSKKLAKHSGMDYAIMTGGDVAPMG-KDAVAAIHKVFDWANTSRK 404
+ +L YGPPG GKTL +K +A ++ + G ++ M ++ A + ++FD A S
Sbjct: 515 KGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAP 574
Query: 405 GVLVFIDEADAFLRKRSSEKISEDLRAA---LNAFLYRTSDQSSR--IMLVLASNTPQQF 459
VL F DE D+ +R + AA LN L +++ + ++ A+N P
Sbjct: 575 CVL-FFDELDSIATQRGGGSGGDGGGAADRVLNQLLTEMDGMNAKKTVFIIGATNRPDII 633
Query: 460 DSAI--NDRLDKMIEFGLPALEERERLIR 486
DSA+ RLD++I LP + R + +
Sbjct: 634 DSALLRPGRLDQLIYIPLPDEDSRLNIFK 662
>At5g43010.1 68418.m05245 26S proteasome AAA-ATPase subunit (RPT4a)
gb|AAF22524.1
Length = 399
Score = 67.7 bits (158), Expect = 2e-11
Identities = 41/150 (27%), Positives = 82/150 (54%), Gaps = 8/150 (5%)
Query: 346 RNLLMYGPPGTGKTLFSKKLAKHSGMDY-AIMTGGDVAPMGKDAVAAIHKVFDWANTSRK 404
+ +L+YGPPGTGKTL ++ +A + ++ +++ + ++ I ++F++A +
Sbjct: 174 KGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFNYAR-EHQ 232
Query: 405 GVLVFIDEADAFLRKRSSEKISED--LRAALNAFLYRTS--DQSSRIMLVLASNTPQQFD 460
++F+DE DA +R SE S D ++ L L + D ++ +++A+N P D
Sbjct: 233 PCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDNLGKVKMIMATNRPDVLD 292
Query: 461 SAI--NDRLDKMIEFGLPALEERERLIRLY 488
A+ RLD+ IE LP + R +++++
Sbjct: 293 PALLRPGRLDRKIEIPLPNEQSRMDILKIH 322
>At1g09100.1 68414.m01016 26S protease regulatory subunit 6A,
putative identical to SP:O04019 from [Arabidopsis
thaliana]
Length = 423
Score = 67.7 bits (158), Expect = 2e-11
Identities = 47/153 (30%), Positives = 77/153 (50%), Gaps = 8/153 (5%)
Query: 346 RNLLMYGPPGTGKTLFSKKLAKHSGMDYAIMTGGDVAPMG-KDAVAAIHKVFDWANTSRK 404
+ +L+YGPPGTGKTL ++ A + + + G + M D + F A +
Sbjct: 205 KGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFLLAK-EKS 263
Query: 405 GVLVFIDEADAFLRKRSSEKISED--LRAALNAFLYRTSDQSS--RIMLVLASNTPQQFD 460
++FIDE DA KR ++S D ++ + L + SS RI ++ A+N D
Sbjct: 264 PCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILD 323
Query: 461 SAI--NDRLDKMIEFGLPALEERERLIRLYFDK 491
A+ + RLD+ IEF P E R R+++++ K
Sbjct: 324 PALMRSGRLDRKIEFPHPTEEARGRILQIHSRK 356
>At3g53230.1 68416.m05865 cell division cycle protein 48, putative /
CDC48, putative very strong similarity to SP|P54609 Cell
division cycle protein 48 homolog {Arabidopsis
thaliana}; contains Pfam profiles PF00004: ATPase AAA
family, PF02359: Cell division protein 48 (CDC48)
N-terminal domain
Length = 815
Score = 67.3 bits (157), Expect = 3e-11
Identities = 49/185 (26%), Positives = 93/185 (50%), Gaps = 11/185 (5%)
Query: 346 RNLLMYGPPGTGKTLFSKKLAKHSGMDYAIMTGGDV-APMGKDAVAAIHKVFDWANTSRK 404
+ +L+YGPPG+GKTL ++ +A +G + + G ++ + + ++ + + K F+ A +
Sbjct: 243 KGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAP 302
Query: 405 GVLVFIDEADAFLRKRSSEKISEDLRAALNAFLYRTSD---QSSRIMLVLASNTPQQFDS 461
+ +FIDE D+ KR EK ++ + + L D + ++++ A+N P D
Sbjct: 303 SI-IFIDEIDSIAPKR--EKTHGEVERRIVSQLLTLMDGLKSRAHVIVMGATNRPNSIDP 359
Query: 462 AIN--DRLDKMIEFGLPALEERERLIRLYFDKFVLQPASEGKRRLSVDQFDY-GALCSTL 518
A+ R D+ I+ G+P R ++R++ L + R+S D Y GA + L
Sbjct: 360 ALRRFGRFDREIDIGVPDEIGRLEVLRIHTKNMKLAEDVD-LERVSKDTHGYVGADLAAL 418
Query: 519 ATRTA 523
T A
Sbjct: 419 CTEAA 423
Score = 59.3 bits (137), Expect = 8e-09
Identities = 44/149 (29%), Positives = 76/149 (51%), Gaps = 10/149 (6%)
Query: 346 RNLLMYGPPGTGKTLFSKKLAKHSGMDYAIMTGGDVAPMG-KDAVAAIHKVFDWANTSRK 404
+ +L YGPPG GKTL +K +A ++ + G ++ M ++ A + ++FD A S
Sbjct: 516 KGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQSAP 575
Query: 405 GVLVFIDEADAFLRKRSSEKISEDLRAA---LNAFLYRTSDQSSR--IMLVLASNTPQQF 459
VL F DE D+ +R + + + AA LN L +++ + ++ A+N P
Sbjct: 576 CVL-FFDELDSIATQRGN-SVGDAGGAADRVLNQLLTEMDGMNAKKTVFIIGATNRPDII 633
Query: 460 DSAI--NDRLDKMIEFGLPALEERERLIR 486
D A+ RLD++I LP E R ++ +
Sbjct: 634 DPALLRPGRLDQLIYIPLPDEESRYQIFK 662
>At2g45500.1 68415.m05659 AAA-type ATPase family protein similar to
SP|Q9QYY8 Spastin (Fragment) {Mus musculus}; contains
Pfam profiles PF00004: ATPase AAA family, PF04212: MIT
domain
Length = 487
Score = 67.3 bits (157), Expect = 3e-11
Identities = 42/145 (28%), Positives = 73/145 (50%), Gaps = 5/145 (3%)
Query: 346 RNLLMYGPPGTGKTLFSKKLAKHSGMDYAIMTGGDVAPMGKDAVAAIHKVFDWANTSRKG 405
R LL++GPPG GKT+ +K +A S + ++ + + K SR+
Sbjct: 250 RGLLLFGPPGNGKTMLAKAVASESQATFFNVSASSLTSKWVGEAEKLVKTLFQVAISRQP 309
Query: 406 VLVFIDEADAFLRKRSSEKISEDLRAALNAFLYR----TSDQSSRIMLVLASNTPQQFDS 461
++F+DE D+ + RS+ + +E R + FL + TS+ ++++ A+N PQ+ D
Sbjct: 310 SVIFMDEIDSIMSTRSTSE-NEASRRLKSEFLIQFDGVTSNPDDLVIIIGATNKPQELDD 368
Query: 462 AINDRLDKMIEFGLPALEERERLIR 486
A+ RL K I LP R+ L +
Sbjct: 369 AVLRRLVKRIYVPLPDSNVRKLLFK 393
>At2g03670.1 68415.m00326 AAA-type ATPase family protein contains
Pfam domain, PF00004: ATPase, AAA family ('A'TPases
'A'ssociated with diverse cellular 'A'ctivities)
Length = 603
Score = 66.1 bits (154), Expect = 7e-11
Identities = 45/162 (27%), Positives = 81/162 (50%), Gaps = 11/162 (6%)
Query: 346 RNLLMYGPPGTGKTLFSKKLAKHSGMDYAIMTGGDV-APMGKDAVAAIHKVFDWANT--- 401
R LL+YGPPGTGKT + + + +++ V ++ + + F A++
Sbjct: 57 RGLLLYGPPGTGKTSLVRAVVQECDAHLIVLSPHSVHRAHAGESEKVLREAFAEASSHAV 116
Query: 402 SRKGVLVFIDEADAFLRKRSSEKISEDLRAALNAFLYRTSDQSS----RIMLVLASNTPQ 457
S K ++FIDE D +R + + +D+R A F S++ S R+++V ++N
Sbjct: 117 SDKPSVIFIDEIDVLCPRRDARR-EQDVRIASQLFTLMDSNKPSSSAPRVVVVASTNRVD 175
Query: 458 QFDSAIN--DRLDKMIEFGLPALEERERLIRLYFDKFVLQPA 497
D A+ R D ++E P E+R ++++LY K L P+
Sbjct: 176 AIDPALRRAGRFDALVEVSTPNEEDRLKILQLYTKKVNLDPS 217
Score = 48.8 bits (111), Expect = 1e-05
Identities = 48/219 (21%), Positives = 95/219 (43%), Gaps = 11/219 (5%)
Query: 280 TLVNETSRFSLGEAVKHPILTVSKAVSSFRKPQDALAGVV-LAPNLEQRLR-DIAIATKN 337
+L+ + F + ++V P + V + D + G+ L L+Q + I +
Sbjct: 253 SLILTSQDFKIAKSVVGPSINRGITVEIPKVTWDDVGGLKDLKKKLQQAVEWPIKHSAAF 312
Query: 338 TRLNKGFYRNLLMYGPPGTGKTLFSKKLAKHSGMDYAIMTGGDVAPM-GKDAVAAIHKVF 396
++ R +L++GPPG KT +K A + + ++ ++ M + A + F
Sbjct: 313 VKMGISPMRGILLHGPPGCSKTTLAKAAANAAQASFFSLSCAELFSMYVGEGEALLRNTF 372
Query: 397 DWANTSRKGVLVFIDEADAFLRKRSSEKISEDLRAA---LNAFLYRTS--DQSSRIMLVL 451
A + + +F DEAD KR E S L+ L +++ I+++
Sbjct: 373 QRARLASPSI-IFFDEADVVACKRGDESSSNSSTVGERLLSTLLTEMDGLEEAKGILVLA 431
Query: 452 ASNTPQQFDSAI--NDRLDKMIEFGLPALEERERLIRLY 488
A+N P D+A+ R D ++ P LE R +++++
Sbjct: 432 ATNRPYAIDAALMRPGRFDLVLYVPPPDLEARFEILQVH 470
>At5g58290.1 68418.m07297 26S proteasome AAA-ATPase subunit (RPT3)
identical to 26S proteasome AAA-ATPase subunit RPT3
GI:6652882 from [Arabidopsis thaliana]
Length = 408
Score = 65.7 bits (153), Expect = 9e-11
Identities = 45/156 (28%), Positives = 76/156 (48%), Gaps = 8/156 (5%)
Query: 346 RNLLMYGPPGTGKTLFSKKLAKHSGMDYAIMTGGD-VAPMGKDAVAAIHKVFDWANTSRK 404
R +L+YGPPGTGKT+ +K +A H+ + + G + V + + VF A +
Sbjct: 190 RGVLLYGPPGTGKTMLAKAVANHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAP 249
Query: 405 GVLVFIDEADAFLRKRSSEKISED--LRAALNAFLYRTS--DQSSRIMLVLASNTPQQFD 460
+ +FIDE DA R + D ++ L L + DQ+ + +++A+N D
Sbjct: 250 AI-IFIDEVDAIATARFDAQTGADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLD 308
Query: 461 SAI--NDRLDKMIEFGLPALEERERLIRLYFDKFVL 494
A+ RLD+ IEF LP ++ + ++ K L
Sbjct: 309 PALLRPGRLDRKIEFPLPDRRQKRLVFQVCTSKMNL 344
>At2g18540.1 68415.m02160 cupin family protein contains Pfam profile
PF00190: Cupin
Length = 707
Score = 65.3 bits (152), Expect = 1e-10
Identities = 35/146 (23%), Positives = 82/146 (56%), Gaps = 1/146 (0%)
Query: 36 KSERKAMEAY-RFDSSALERAASAAKELERSRHAKDALELSKLQESTRQQEQMAKIKEYE 94
+ +R+ EA R + E + +E ER + ++A + K +E ++E+MAK +E E
Sbjct: 477 RKKREEEEARKREEERKREEEEAKRREEERKKREEEAEQARKREEEREKEEEMAKKREEE 536
Query: 95 AAIEQAKVEQKKVDYEERRKTLQEETKQHQMRAQYQDQLAKKRYEEQLVQQQKSQEEILR 154
++ + ++K E+ RK +EE ++ + + ++++AK+R +E+ ++++ E +R
Sbjct: 537 RQRKEREEVERKRREEQERKRREEEARKREEERKREEEMAKRREQERQRKEREEVERKIR 596
Query: 155 KQEESVAKQEALRRATIEHEMELREK 180
+++E ++E +R E + + RE+
Sbjct: 597 EEQERKREEEMAKRREQERQKKEREE 622
Score = 64.5 bits (150), Expect = 2e-10
Identities = 51/166 (30%), Positives = 85/166 (51%), Gaps = 13/166 (7%)
Query: 27 VAAPSTNLSKSERKAMEAYRFDSSALERAASAAKEL--------ERSRHAKDALELSKLQ 78
V A S NLS K + + +S E A+ A EL ER R ++ +E + +
Sbjct: 390 VVAVSFNLSNETIKGLLKAQKESVIFECASCAEGELSKLMREIEERKRREEEEIERRRKE 449
Query: 79 ESTRQQEQMAKIKEYEAAI--EQAKVEQKKVDYEERRKTLQEETKQHQMRAQYQDQLAKK 136
E ++ + AK +E E A E+ + E+KK + EE RK +EE K+ + A+ +++ KK
Sbjct: 450 EEEARKREEAKRREEEEAKRREEEETERKKREEEEARKR-EEERKREEEEAKRREEERKK 508
Query: 137 RYEEQLVQQQKSQEEILRKQEESVAKQEALRRATIEHEMELREKNK 182
R EE +Q + +EE K+EE K+E R+ E+E + + +
Sbjct: 509 REEE--AEQARKREEEREKEEEMAKKREEERQRKEREEVERKRREE 552
Score = 60.1 bits (139), Expect = 4e-09
Identities = 38/151 (25%), Positives = 81/151 (53%), Gaps = 3/151 (1%)
Query: 34 LSKSERKAMEAYRFDSSALERAASAAKELERSRHAKDALELSKLQESTRQ-QEQMAKIKE 92
+ + R+ E R + A +R +E E ++ + + + +E R+ +E+ + +E
Sbjct: 545 VERKRREEQERKRREEEARKREEERKREEEMAKRREQERQRKEREEVERKIREEQERKRE 604
Query: 93 YEAAIEQAKVEQKKVDYE-ERRKTLQEETKQHQMRAQYQDQLAKKRYEEQLVQQQKSQEE 151
E A + + QKK E ER+K +E K+ + A+ +++ ++R E + V++++ +EE
Sbjct: 605 EEMAKRREQERQKKEREEMERKKREEEARKREEEMAKIREE-ERQRKEREDVERKRREEE 663
Query: 152 ILRKQEESVAKQEALRRATIEHEMELREKNK 182
+R++EE ++EA +RA E + E+ K
Sbjct: 664 AMRREEERKREEEAAKRAEEERRKKEEEEEK 694
Score = 58.8 bits (136), Expect = 1e-08
Identities = 40/143 (27%), Positives = 76/143 (53%), Gaps = 7/143 (4%)
Query: 39 RKAMEAYRFDSSALERAASAAKELERSRHAKDALELSKLQESTRQQEQMAKIKEYEAAIE 98
RK EA R + E A +E E R ++ E K +E +++E+ AK +E E
Sbjct: 454 RKREEAKRRE----EEEAKRREEEETERKKREEEEARKREEERKREEEEAKRREEERKKR 509
Query: 99 QAKVEQKKVDYEERRKTLQEETKQHQMRAQYQ-DQLAKKRYEEQLVQQQKSQEEILRKQE 157
+ + EQ + EER K + K+ + R + + +++ +KR EEQ ++++ +EE +++E
Sbjct: 510 EEEAEQARKREEEREKEEEMAKKREEERQRKEREEVERKRREEQ--ERKRREEEARKREE 567
Query: 158 ESVAKQEALRRATIEHEMELREK 180
E ++E +R E + + RE+
Sbjct: 568 ERKREEEMAKRREQERQRKEREE 590
Score = 55.2 bits (127), Expect = 1e-07
Identities = 44/155 (28%), Positives = 77/155 (49%), Gaps = 14/155 (9%)
Query: 34 LSKSERKAMEAYRFDSSALERAASAAKELERSRHAKDALELSKLQESTRQQEQMAKIKEY 93
LSK R+ E R + +ER KE E +R ++A + + R++E+ + K
Sbjct: 425 LSKLMREIEERKRREEEEIERRR---KEEEEARKREEAKRREEEEAKRREEEETERKKRE 481
Query: 94 EAAIEQAKVEQKKVDYE-----ERRKTLQEETKQHQMRAQY---QDQLAKKRYEEQLVQQ 145
E + + E+K+ + E E RK +EE +Q + R + ++++AKKR EE +Q
Sbjct: 482 EEEARKREEERKREEEEAKRREEERKKREEEAEQARKREEEREKEEEMAKKREEE---RQ 538
Query: 146 QKSQEEILRKQEESVAKQEALRRATIEHEMELREK 180
+K +EE+ RK+ E ++ A E RE+
Sbjct: 539 RKEREEVERKRREEQERKRREEEARKREEERKREE 573
Score = 54.0 bits (124), Expect = 3e-07
Identities = 39/145 (26%), Positives = 74/145 (51%), Gaps = 8/145 (5%)
Query: 38 ERKAMEAYRFDSSALERAASAAKELERSRHAKDALELSKLQESTRQQEQMAKIKEYEAAI 97
+R+ EA R + +R A + +R + E++K +E RQ+ KE E
Sbjct: 493 KREEEEAKRREEERKKREEEAEQARKREEEREKEEEMAKKREEERQR------KEREEVE 546
Query: 98 EQAKVEQKKVDYEERRKTLQEETKQHQMRAQYQDQLAKKRYEEQLVQQQKSQEEILRKQE 157
+ + EQ++ EE + +EE K+ + A+ ++Q +++ E++ ++K +EE RK+E
Sbjct: 547 RKRREEQERKRREEEARKREEERKREEEMAKRREQERQRKEREEV--ERKIREEQERKRE 604
Query: 158 ESVAKQEALRRATIEHEMELREKNK 182
E +AK+ R E E R+K +
Sbjct: 605 EEMAKRREQERQKKEREEMERKKRE 629
Score = 53.6 bits (123), Expect = 4e-07
Identities = 35/149 (23%), Positives = 78/149 (52%), Gaps = 5/149 (3%)
Query: 36 KSERKAMEAY-RFDSSALERAASAAKELERSRHAKDALELSKLQESTRQQ-EQMAKIKEY 93
K E +A +A R + E + +E ER R ++ +E + +E R++ E+ A+ +E
Sbjct: 508 KREEEAEQARKREEEREKEEEMAKKREEERQRKEREEVERKRREEQERKRREEEARKREE 567
Query: 94 EAAIEQAKVEQKKVDYEERRKTLQEETKQHQMRAQYQDQLAKKRYEEQLVQQQKSQEEIL 153
E E+ ++++ + + + + E + + + ++++AK+R +E+ Q+K +EE+
Sbjct: 568 ERKREEEMAKRREQERQRKEREEVERKIREEQERKREEEMAKRREQER---QKKEREEME 624
Query: 154 RKQEESVAKQEALRRATIEHEMELREKNK 182
RK+ E A++ A I E R++ +
Sbjct: 625 RKKREEEARKREEEMAKIREEERQRKERE 653
Score = 53.2 bits (122), Expect = 5e-07
Identities = 36/134 (26%), Positives = 75/134 (55%), Gaps = 7/134 (5%)
Query: 53 ERAASAAKELERSRHAKDALELSKLQESTRQQEQMAKIKEYEAAIEQAKVEQKKVDYEER 112
ER +E+ER R ++ E + +E R++E+ K +E A + + ++K+ + ER
Sbjct: 536 ERQRKEREEVERKR--REEQERKRREEEARKREEERKREEEMAKRREQERQRKEREEVER 593
Query: 113 RKTLQEETKQHQMRAQYQDQLAKKRYEEQLVQQQKSQEEILRKQEESVAK---QEALRRA 169
+ ++E K+ + A+ ++Q +K+ E++ ++K +EE RK+EE +AK +E R+
Sbjct: 594 KIREEQERKREEEMAKRREQERQKKEREEM--ERKKREEEARKREEEMAKIREEERQRKE 651
Query: 170 TIEHEMELREKNKL 183
+ E + RE+ +
Sbjct: 652 REDVERKRREEEAM 665
Score = 51.2 bits (117), Expect = 2e-06
Identities = 38/157 (24%), Positives = 86/157 (54%), Gaps = 15/157 (9%)
Query: 36 KSERKAMEAYRFDSSALERAASAAKELERSRHAKDALELSKLQESTRQQEQMAKIKEYEA 95
+ ER+ +E R + +R A++ E R ++ E++K +E RQ+++ +E E
Sbjct: 539 RKEREEVERKRREEQERKRREEEARKREEERKREE--EMAKRREQERQRKER---EEVER 593
Query: 96 AIEQAKVEQKKVDYEERRKTLQEETKQHQMRAQYQDQLAKKRYEEQLV-----QQQKSQE 150
I + + +++ + +RR+ +++ ++ +M + +++ A+KR EE +Q+K +E
Sbjct: 594 KIREEQERKREEEMAKRREQERQKKEREEMERKKREEEARKREEEMAKIREEERQRKERE 653
Query: 151 EILRK--QEESVAKQEALRR---ATIEHEMELREKNK 182
++ RK +EE++ ++E +R A E E R+K +
Sbjct: 654 DVERKRREEEAMRREEERKREEEAAKRAEEERRKKEE 690
Score = 50.8 bits (116), Expect = 3e-06
Identities = 39/145 (26%), Positives = 76/145 (52%), Gaps = 8/145 (5%)
Query: 38 ERKAMEAY-RFDSSALERAASAAKELERSRHAKDALELSKLQESTRQ-QEQMAKIKEYEA 95
+R+ EA R + E + +E ER R ++ +E +E R+ +E+MAK +E E
Sbjct: 556 KRREEEARKREEERKREEEMAKRREQERQRKEREEVERKIREEQERKREEEMAKRREQER 615
Query: 96 AIEQAKVEQKKVDYEERRKTLQEETK--QHQMRAQYQDQLAKKRYEEQLVQQQKSQEEIL 153
++ + ++K EE RK +E K + + + + ++ + +KR EE+ +++ EE
Sbjct: 616 QKKEREEMERKKREEEARKREEEMAKIREEERQRKEREDVERKRREEEAMRR----EEER 671
Query: 154 RKQEESVAKQEALRRATIEHEMELR 178
+++EE+ + E RR E E + R
Sbjct: 672 KREEEAAKRAEEERRKKEEEEEKRR 696
Score = 45.6 bits (103), Expect = 1e-04
Identities = 27/145 (18%), Positives = 70/145 (48%), Gaps = 3/145 (2%)
Query: 36 KSERKAMEAYRFDSSALERAASAAKELERSRHAKDALELSKLQESTRQQEQMAKIKEYEA 95
+ E K E + E + +E ER R ++A + ++ ++ + A+ +E E
Sbjct: 464 EEEAKRREEEETERKKREEEEARKREEERKREEEEAKRREEERKKREEEAEQARKREEER 523
Query: 96 AIEQAKVEQKKVDYEERRKTLQEETKQHQMRAQYQDQLAKKRYEEQLVQQQKSQEEILRK 155
E+ ++++ + + + + E ++ + + +++ A+KR EE+ +++ ++ R+
Sbjct: 524 EKEEEMAKKREEERQRKEREEVERKRREEQERKRREEEARKREEERKREEEMAKR---RE 580
Query: 156 QEESVAKQEALRRATIEHEMELREK 180
QE ++E + R E + RE+
Sbjct: 581 QERQRKEREEVERKIREEQERKREE 605
Score = 43.2 bits (97), Expect = 5e-04
Identities = 30/116 (25%), Positives = 61/116 (52%), Gaps = 10/116 (8%)
Query: 36 KSERKAMEAYRFDSSALERAASAAKELERSRHAKDALELSKL---QESTRQQEQMAKIKE 92
+ ER+ +E + +R AK E+ R K+ E+ + +E+ +++E+MAKI+E
Sbjct: 585 RKEREEVERKIREEQERKREEEMAKRREQERQKKEREEMERKKREEEARKREEEMAKIRE 644
Query: 93 YEAA------IEQAKVEQKKVDYEERRKTLQEETKQ-HQMRAQYQDQLAKKRYEEQ 141
E +E+ + E++ + EE RK +E K+ + R + +++ K+R+ Q
Sbjct: 645 EERQRKEREDVERKRREEEAMRREEERKREEEAAKRAEEERRKKEEEEEKRRWPPQ 700
>At1g05910.1 68414.m00620 cell division cycle protein 48-related /
CDC48-related similar to SP|P54609 Cell division cycle
protein 48 homolog {Arabidopsis thaliana}; contains Pfam
profiles PF00004: ATPase AAA family, PF00439:
Bromodomain
Length = 1210
Score = 65.3 bits (152), Expect = 1e-10
Identities = 56/189 (29%), Positives = 89/189 (47%), Gaps = 13/189 (6%)
Query: 346 RNLLMYGPPGTGKTLFSKKL---AKHSG--MDYAIMTGGDV-APMGKDAVAAIHKVFDWA 399
R +L+ GPPGTGKTL ++ L A +G + + + G DV + +A + +F+ A
Sbjct: 416 RGVLLCGPPGTGKTLIARALACAASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEA 475
Query: 400 NTSRKGVLVFIDEADAFLRKRSS--EKISEDLRAALNAFLYRTSDQSSRIMLVLASNTPQ 457
++ + +F DE D RSS E+I + + L A L D +++L+ A+N
Sbjct: 476 QRNQPSI-IFFDEIDGLAPVRSSKQEQIHNSIVSTLLA-LMDGLDSRGQVVLIGATNRVD 533
Query: 458 QFDSAIN--DRLDKMIEFGLPALEERERLIRLYFDKFVLQPASEGKRRLSVDQFDY-GAL 514
D A+ R D+ F LP E R ++ ++ K+ P E K L+ Y GA
Sbjct: 534 AIDGALRRPGRFDREFNFSLPGCEARAEILDIHTRKWKHPPTRELKEELAATCVGYCGAD 593
Query: 515 CSTLATRTA 523
L T A
Sbjct: 594 LKALCTEAA 602
>At2g29080.1 68415.m03535 FtsH protease, putative similar to
AAA-metalloprotease FtsH [Pisum sativum] GI:15021761;
contains Pfam profiles PF01434: Peptidase family M41,
PF00004: ATPase AAA family
Length = 809
Score = 64.9 bits (151), Expect = 2e-10
Identities = 48/192 (25%), Positives = 91/192 (47%), Gaps = 10/192 (5%)
Query: 346 RNLLMYGPPGTGKTLFSKKLAKHSGMDYAIMTGGDVAPMGKD-AVAAIHKVFDWANTSRK 404
+ L+ GPPGTGKTL +K A SG+ + ++G D M + + +F A +
Sbjct: 356 KGALLVGPPGTGKTLLAKATAGESGVPFLSISGSDFMEMFVGVGPSRVRHLFQEARQAAP 415
Query: 405 GVLVFIDEADAFLRKRSSEKI--SEDLRAALNAFLYRTS--DQSSRIMLVLASNTPQQFD 460
+ +FIDE DA R R + +++ + LN L ++ ++++ +N P D
Sbjct: 416 SI-IFIDEIDAIGRARGRGGLGGNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILD 474
Query: 461 SAI--NDRLDKMIEFGLPALEERERLIRLYFDKFVL--QPASEGKRRLSVDQFDYGALCS 516
A+ R D+ I P ++ R+++ ++Y K L +P+ +R ++ GA +
Sbjct: 475 KALLRPGRFDRQITIDKPDIKGRDQIFKIYLKKIKLDHEPSYYSQRLAALTPGFAGADIA 534
Query: 517 TLATRTAGMSGR 528
+ A ++ R
Sbjct: 535 NVCNEAALIAAR 546
>At1g03000.1 68414.m00271 AAA-type ATPase family protein contains
Pfam domain, PF00004: ATPase, AAA family ('A'TPases
'A'ssociated with diverse cellular 'A'ctivities)
Length = 941
Score = 64.5 bits (150), Expect = 2e-10
Identities = 46/155 (29%), Positives = 81/155 (52%), Gaps = 9/155 (5%)
Query: 348 LLMYGPPGTGKTLFSKKLAKHSGMDYAIMTGGDVAPMG-KDAVAAIHKVFDWANTSRKGV 406
+L+YGPPGTGKTL +K +A +++ + G ++ M ++ + +F+ A ++R V
Sbjct: 694 VLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGESEKNVRDIFEKARSARPCV 753
Query: 407 LVFIDEADAFLRKR----SSEKISEDLRAALNAFLYRTSDQSSRIMLVLASNTPQQFDSA 462
+F DE D+ R S + + + + + A + SD S + ++ ASN P D A
Sbjct: 754 -IFFDELDSLAPARGASGDSGGVMDRVVSQMLAEIDGLSDSSQDLFIIGASNRPDLIDPA 812
Query: 463 I--NDRLDKMIEFGLPA-LEERERLIRLYFDKFVL 494
+ R DK++ G+ A RER+++ KF L
Sbjct: 813 LLRPGRFDKLLYVGVNADASYRERVLKALTRKFKL 847
>At2g26140.1 68415.m03137 FtsH protease, putative contains
similarity to YME1 GI:295582, a member of the
ftsH-SEC18-PAS1-CDC48 family of putative ATPase-encoding
genes from [Saccharomyces cerevisiae]
Length = 717
Score = 64.1 bits (149), Expect = 3e-10
Identities = 48/174 (27%), Positives = 86/174 (49%), Gaps = 9/174 (5%)
Query: 324 LEQRLRDIAIATKNTRLNKGFYRNLLMYGPPGTGKTLFSKKLAKHSGMDYAIMTGGDVAP 383
LE+ + + + TRL + +L+ GPPGTGKT+ ++ +A +G+ + +G +
Sbjct: 239 LEEIVHYLRDPKRFTRLGGKLPKGVLLVGPPGTGKTMLARAIAGEAGVPFFSCSGSEFEE 298
Query: 384 MGKDAVAAIHKVFDWANTSRK--GVLVFIDEADAFLRKRSSEKISEDLRAALNAFLYRTS 441
M A +V D + ++K ++FIDE DA R + K + ++ LN L
Sbjct: 299 MFVGVGA--RRVRDLFSAAKKCSPCIIFIDEIDAIGGSR-NPKDQQYMKMTLNQMLVELD 355
Query: 442 --DQSSRIMLVLASNTPQQFDSAI--NDRLDKMIEFGLPALEERERLIRLYFDK 491
Q+ I++V A+N P+ D A+ R D+ I P +E R +++ + K
Sbjct: 356 GFKQNEGIIVVAATNFPESLDKALVRPGRFDRHIVVPNPDVEGRRQILESHMSK 409
>At2g20140.1 68415.m02353 26S protease regulatory complex subunit 4,
putative similar to Swiss-Prot:P48601 26S protease
regulatory subunit 4 (P26S4) [Drosophila melanogaster]
Length = 443
Score = 64.1 bits (149), Expect = 3e-10
Identities = 43/156 (27%), Positives = 80/156 (51%), Gaps = 8/156 (5%)
Query: 346 RNLLMYGPPGTGKTLFSKKLAKHSGMDYAIMTGGD-VAPMGKDAVAAIHKVFDWANTSRK 404
+ +++YG PGTGKTL +K +A + + + G + + D + ++F A+
Sbjct: 223 KGVILYGEPGTGKTLLAKAVANSTSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSP 282
Query: 405 GVLVFIDEADAFLRKR--SSEKISEDLRAALNAFLYRTSDQSSR--IMLVLASNTPQQFD 460
+ VFIDE DA KR ++ +++ + L + SR + ++LA+N + D
Sbjct: 283 SI-VFIDEIDAVGTKRYDANSGGEREIQRTMLELLNQLDGFDSRGDVKVILATNRIESLD 341
Query: 461 SAI--NDRLDKMIEFGLPALEERERLIRLYFDKFVL 494
A+ R+D+ IEF LP ++ R R+ +++ K L
Sbjct: 342 PALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSKMTL 377
>At4g29040.1 68417.m04153 26S proteasome AAA-ATPase subunit (RPT2a)
almost identical to 26S proteasome AAA-ATPase subunit
RPT2a (GI:6652880) {Arabidopsis thaliana}; Drosophila
melanogaster 26S proteasome subunit 4 ATPase,
PID:g1066065
Length = 443
Score = 63.3 bits (147), Expect = 5e-10
Identities = 43/156 (27%), Positives = 79/156 (50%), Gaps = 8/156 (5%)
Query: 346 RNLLMYGPPGTGKTLFSKKLAKHSGMDYAIMTGGD-VAPMGKDAVAAIHKVFDWANTSRK 404
+ +++YG PGTGKTL +K +A + + + G + + D + ++F A+
Sbjct: 223 KGVILYGEPGTGKTLLAKAVANSTSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSP 282
Query: 405 GVLVFIDEADAFLRKR--SSEKISEDLRAALNAFLYRTSDQSSR--IMLVLASNTPQQFD 460
+ VFIDE DA KR + +++ + L + SR + ++LA+N + D
Sbjct: 283 SI-VFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVKVILATNRIESLD 341
Query: 461 SAI--NDRLDKMIEFGLPALEERERLIRLYFDKFVL 494
A+ R+D+ IEF LP ++ R R+ +++ K L
Sbjct: 342 PALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSKMTL 377
>At2g34560.2 68415.m04246 katanin, putative similar to katanin p60
subunit [Strongylocentrotus purpuratus] GI:3098603;
contains Pfam profile PF00004: ATPase AAA family
Length = 393
Score = 62.9 bits (146), Expect = 6e-10
Identities = 44/149 (29%), Positives = 75/149 (50%), Gaps = 7/149 (4%)
Query: 345 YRNLLMYGPPGTGKTLFSKKLAKHSGMDYAIMTGGDVAPMGK-DAVAAIHKVFDWANTSR 403
++ +L++GPPGTGKT+ +K +A + ++ V + D+ I +FD A
Sbjct: 145 WKGILLFGPPGTGKTMLAKAVATECNTTFFNISASSVVSKWRGDSEKLIRVLFDLARHHA 204
Query: 404 KGVLVFIDEADAFLRKRSSEKISE-DLRAALNAFLYRTSD---QSSRIMLVL-ASNTPQQ 458
+F+DE DA + +R E SE + L L D +++ ++ VL A+N P +
Sbjct: 205 PST-IFLDEIDAIISQRGGEGRSEHEASRRLKTELLIQMDGLQKTNELVFVLAATNLPWE 263
Query: 459 FDSAINDRLDKMIEFGLPALEERERLIRL 487
D+A+ RL+K I LP E R + +
Sbjct: 264 LDAAMLRRLEKRILVPLPDPEARRGMFEM 292
>At2g34560.1 68415.m04245 katanin, putative similar to katanin p60
subunit [Strongylocentrotus purpuratus] GI:3098603;
contains Pfam profile PF00004: ATPase AAA family
Length = 384
Score = 62.9 bits (146), Expect = 6e-10
Identities = 44/149 (29%), Positives = 75/149 (50%), Gaps = 7/149 (4%)
Query: 345 YRNLLMYGPPGTGKTLFSKKLAKHSGMDYAIMTGGDVAPMGK-DAVAAIHKVFDWANTSR 403
++ +L++GPPGTGKT+ +K +A + ++ V + D+ I +FD A
Sbjct: 136 WKGILLFGPPGTGKTMLAKAVATECNTTFFNISASSVVSKWRGDSEKLIRVLFDLARHHA 195
Query: 404 KGVLVFIDEADAFLRKRSSEKISE-DLRAALNAFLYRTSD---QSSRIMLVL-ASNTPQQ 458
+F+DE DA + +R E SE + L L D +++ ++ VL A+N P +
Sbjct: 196 PST-IFLDEIDAIISQRGGEGRSEHEASRRLKTELLIQMDGLQKTNELVFVLAATNLPWE 254
Query: 459 FDSAINDRLDKMIEFGLPALEERERLIRL 487
D+A+ RL+K I LP E R + +
Sbjct: 255 LDAAMLRRLEKRILVPLPDPEARRGMFEM 283
>At3g02450.1 68416.m00232 cell division protein ftsH, putative
similar to SWISS-PROT:P46469 cell division protein ftsH
homolog [Lactococcus lactis]; contains Pfam domain,
PF00004: ATPase, AAA family ('A'TPases 'A'ssociated with
diverse cellular 'A'ctivities)
Length = 622
Score = 62.1 bits (144), Expect = 1e-09
Identities = 40/149 (26%), Positives = 77/149 (51%), Gaps = 9/149 (6%)
Query: 346 RNLLMYGPPGTGKTLFSKKLAKHSGMDYAIMTGGDVAPMGKDAVAAIHKVFDWANTSRKG 405
R +L+ GPPGTGKTL ++ +A +G+ + ++ + + AA ++ D N +RK
Sbjct: 368 RGVLLVGPPGTGKTLLARAVAGEAGVPFFSVSASEFVELFVGRGAA--RIRDLFNAARKN 425
Query: 406 --VLVFIDEADAFLRKRSSEKISEDLRAALNAFLYRTS--DQSSRIMLVLASNTPQQFDS 461
++FIDE DA KR +++ LN L + ++++++ A+N P+ DS
Sbjct: 426 SPSIIFIDELDAVGGKR-GRSFNDERDQTLNQLLTEMDGFESDTKVIVIAATNRPEALDS 484
Query: 462 AI--NDRLDKMIEFGLPALEERERLIRLY 488
A+ R + + P E R +++ ++
Sbjct: 485 ALCRPGRFSRKVLVAEPDQEGRRKILAIH 513
>At5g53170.1 68418.m06610 FtsH protease, putative similar to
ATP-dependent metalloprotease FtsH1 GI:3600100 from [Mus
musculus]
Length = 806
Score = 61.3 bits (142), Expect = 2e-09
Identities = 58/214 (27%), Positives = 96/214 (44%), Gaps = 17/214 (7%)
Query: 282 VNETSRFSLGEAVKHPILTVSKAVSSFRKPQDALAGVVLAPNLEQRLRDIAIATKNTRLN 341
V +S +S E K +T K V +F+ D LE+ + + +K TRL
Sbjct: 337 VGSSSSYSPKELNKE--ITPEKNVKTFK---DVKGCDDAKQELEEVVEYLKNPSKFTRLG 391
Query: 342 KGFYRNLLMYGPPGTGKTLFSKKLAKHSGMDYAIMTGGDVAPMGKDAVAAIHKVFDWANT 401
+ +L+ G PGTGKTL +K +A +G+ + G + M A + A
Sbjct: 392 GKLPKGILLTGAPGTGKTLLAKAIAGEAGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAK 451
Query: 402 SRKGVLVFIDEADAF--LRKR---SSEKISEDLRAALNAFLYRTSDQSSRIMLVLASNTP 456
+ ++FIDE DA RK+ ++K L ++ F +Q+ I+++ A+N P
Sbjct: 452 KKAPCIIFIDEIDAVGSTRKQWEGHTKKTLHQLLVEMDGF-----EQNEGIIVMAATNLP 506
Query: 457 QQFDSAIN--DRLDKMIEFGLPALEERERLIRLY 488
D A+ R D+ I P + RE ++ LY
Sbjct: 507 DILDPALTRPGRFDRHIVVPSPDVRGREEILELY 540
>At1g07510.1 68414.m00804 FtsH protease, putative similar to
AAA-metalloprotease FtsH [Pisum sativum] GI:15021761;
contains Pfam profiles PF01434: Peptidase family M41,
PF00004: ATPase AAA family
Length = 813
Score = 61.3 bits (142), Expect = 2e-09
Identities = 48/193 (24%), Positives = 88/193 (45%), Gaps = 11/193 (5%)
Query: 346 RNLLMYGPPGTGKTLFSKKLAKHSGMDYAIMTGGDVAPMGKD-AVAAIHKVFDWANTSRK 404
+ L+ GPPGTGKTL +K A S + + ++G D M + + +F A
Sbjct: 361 KGALLVGPPGTGKTLLAKATAGESAVPFLSISGSDFMEMFVGVGPSRVRNLFQEARQCAP 420
Query: 405 GVLVFIDEADAFLRKRSSEKIS---EDLRAALNAFLYRTS--DQSSRIMLVLASNTPQQF 459
+ +FIDE DA R R S ++ + LN L ++ ++++ +N P
Sbjct: 421 SI-IFIDEIDAIGRARGRGGFSGGNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDIL 479
Query: 460 DSAI--NDRLDKMIEFGLPALEERERLIRLYFDKFVL--QPASEGKRRLSVDQFDYGALC 515
D A+ R D+ I P ++ R+++ ++Y K L +P+ +R ++ GA
Sbjct: 480 DKALLRPGRFDRQITIDKPDIKGRDQIFQIYLKKIKLDHEPSYYSQRLAALTPGFAGADI 539
Query: 516 STLATRTAGMSGR 528
+ + A ++ R
Sbjct: 540 ANVCNEAALIAAR 552
>At1g62130.1 68414.m07010 AAA-type ATPase family protein contains
Pfam domain, PF00004: ATPase, AAA family
Length = 1025
Score = 60.9 bits (141), Expect = 3e-09
Identities = 39/149 (26%), Positives = 77/149 (51%), Gaps = 8/149 (5%)
Query: 348 LLMYGPPGTGKTLFSKKLAKHSGMDYAIMTGGDVAPMGKDAVAAIHKVFDWANTSRKGVL 407
+L++GP GTGKT+ +K +A +G + M+ G+ V A+ + + S +
Sbjct: 773 ILLFGPSGTGKTMLAKAVATEAGANLINMSMSRWFSEGEKYVKAVFSLASKISPS----I 828
Query: 408 VFIDEADAFLRKRSSEKISEDLRAALNAFLYRTSDQSSRIMLVLASNTPQQFDSAINDRL 467
+F+DE ++ L + + +E + +N RT+++ R++++ A+N P D A+ RL
Sbjct: 829 IFLDEVESMLHRYRLKTKNEFI---INWDGLRTNEKE-RVLVLAATNRPFDLDEAVIRRL 884
Query: 468 DKMIEFGLPALEERERLIRLYFDKFVLQP 496
+ GLP R +++++ K L P
Sbjct: 885 PHRLMVGLPDARSRSKILKVILSKEDLSP 913
>At1g06430.1 68414.m00680 FtsH protease, putative similar to zinc
dependent protease GI:7650138 from [Arabidopsis
thaliana]
Length = 685
Score = 60.9 bits (141), Expect = 3e-09
Identities = 64/247 (25%), Positives = 119/247 (48%), Gaps = 28/247 (11%)
Query: 346 RNLLMYGPPGTGKTLFSKKLAKHSGMDYAIMTGGDVAPMGKDAVAA-IHKVFDWANTSRK 404
+ +L+ GPPGTGKTL +K +A +G+ + ++G + M A+ + +F A +
Sbjct: 254 KGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAP 313
Query: 405 GVLVFIDEADAFLRKRSS--EKISEDLRAALNAFLYRTS--DQSSRIMLVLASNTPQQFD 460
+VF+DE DA R+R + +++ LN L + ++ +++V A+N D
Sbjct: 314 -CIVFVDEIDAVGRQRGTGIGGGNDEREQTLNQLLTEMDGFEGNTGVIVVAATNRADILD 372
Query: 461 SAI--NDRLDKMIEFGLPALEERERLIRLYFDKFVLQPASEGKRRLSVDQFDYGALCSTL 518
SA+ R D+ + +P ++ R +++++ G ++ F+ G +
Sbjct: 373 SALLRPGRFDRQVSVDVPDVKGRTDILKVH----------SGNKK-----FESGVSLEVI 417
Query: 519 ATRTAGMSGRALSKLGVAWQAAAYASDDGRLTEQMCIDICDDAVRDHRQKME-WLSAEEK 577
A RT G SG L+ L +AA A G+ T +I DD++ ME + + K
Sbjct: 418 AMRTPGFSGADLANL--LNEAAILAGRRGK-TAISSKEI-DDSIDRIVAGMEGTVMTDGK 473
Query: 578 SRSMMPY 584
S+S++ Y
Sbjct: 474 SKSLVAY 480
>At3g01610.1 68416.m00092 AAA-type ATPase family protein contains
Pfam domain, PF00004: ATPase, AAA family ('A'TPases
'A'ssociated with diverse cellular 'A'ctivities)
Length = 820
Score = 58.8 bits (136), Expect = 1e-08
Identities = 45/153 (29%), Positives = 70/153 (45%), Gaps = 6/153 (3%)
Query: 349 LMYGPPGTGKTLFSKKLAKHSGMDYAIMTGGDVA-PMGKDAVAAIHKVFDWANTSRKGVL 407
L+YGPPG GKTL +K A +G ++ + G ++ ++ AI +F A T V
Sbjct: 566 LLYGPPGCGKTLIAKAAANEAGANFMHIKGAELLNKYVGESELAIRTLFQRARTCAPCV- 624
Query: 408 VFIDEADAFLRKRSSEKISEDLRAALNAFLYRTSDQSSRIMLVL-ASNTPQQFDSAI--N 464
+F DE DA R E + + LN FL R + V+ A+N P D A
Sbjct: 625 IFFDEVDALTTSRGKEG-AWVVERLLNQFLVELDGGERRNVYVIGATNRPDVVDPAFLRP 683
Query: 465 DRLDKMIEFGLPALEERERLIRLYFDKFVLQPA 497
R ++ LP +ER +++ K + P+
Sbjct: 684 GRFGNLLYVPLPNADERASILKAIARKKPIDPS 716
Score = 45.2 bits (102), Expect = 1e-04
Identities = 43/169 (25%), Positives = 74/169 (43%), Gaps = 15/169 (8%)
Query: 348 LLMYGPPGTGKTLFSKKLAKHSGMD-YAIMTGGDVAPMGKDAVAAIHKVFDWANTSRKGV 406
+L +GPPG GKT + +A +G+ Y I ++ + + I ++F A + +
Sbjct: 270 ILFHGPPGCGKTKLANAIANEAGVPFYKISATEVISGVSGASEENIRELFSKAYRTAPSI 329
Query: 407 LVFIDEADAFLRKRSSEKISEDLRAAL----------NAFLYRTSDQSSRIMLVL-ASNT 455
VFIDE DA KR +++ + R N D S+ +LV+ A+N
Sbjct: 330 -VFIDEIDAIGSKRENQQREMEKRIVTQLLTCMDGPGNKGDKNAPDSSAGFVLVIGATNR 388
Query: 456 PQQFDSAI--NDRLDKMIEFGLPALEERERLIRLYFDKFVLQPASEGKR 502
P D A+ + R + I P + R ++ + K L+ + KR
Sbjct: 389 PDALDPALRRSGRFETEIALTAPDEDARAEILSVVAQKLRLEGPFDKKR 437
>At2g30950.1 68415.m03775 FtsH protease (VAR2) identical to zinc
dependent protease VAR2 GI:7650138 from [Arabidopsis
thaliana]
Length = 695
Score = 58.0 bits (134), Expect = 2e-08
Identities = 50/195 (25%), Positives = 94/195 (48%), Gaps = 23/195 (11%)
Query: 346 RNLLMYGPPGTGKTLFSKKLAKHSGMDYAIMTGGDVAPMGKDAVAA-IHKVFDWANTSRK 404
+ +L+ GPPGTGKTL +K +A +G+ + ++G + M A+ + +F A +
Sbjct: 261 KGVLLIGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAP 320
Query: 405 GVLVFIDEADAFLRKRSS--EKISEDLRAALNAFLYRTS--DQSSRIMLVLASNTPQQFD 460
+VF+DE DA R+R + +++ LN L + ++ +++V A+N D
Sbjct: 321 -CIVFVDEIDAVGRQRGTGIGGGNDEREQTLNQLLTEMDGFEGNTGVIVVAATNRADILD 379
Query: 461 SAI--NDRLDKMIEFGLPALEERERLIRLYFDKFVLQPASEGKRRLSVDQFDYGALCSTL 518
SA+ R D+ + +P ++ R +++++ G ++ FD +
Sbjct: 380 SALLRPGRFDRQVSVDVPDVKGRTDILKVH----------AGNKK-----FDNDVSLEII 424
Query: 519 ATRTAGMSGRALSKL 533
A RT G SG L+ L
Sbjct: 425 AMRTPGFSGADLANL 439
>At5g42270.1 68418.m05145 FtsH protease, putative similar to FtsH
protease GI:13183728 from [Medicago sativa]
Length = 704
Score = 56.8 bits (131), Expect = 4e-08
Identities = 42/160 (26%), Positives = 79/160 (49%), Gaps = 8/160 (5%)
Query: 336 KNTRLNKGFYRNLLMYGPPGTGKTLFSKKLAKHSGMDYAIMTGGDVAPMGKDAVAA-IHK 394
K T L + L+ GPPGTGKTL ++ +A +G+ + + + A+ +
Sbjct: 274 KYTALGAKIPKGCLLVGPPGTGKTLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRD 333
Query: 395 VFDWANTSRKGVLVFIDEADAFLRKRSSEK--ISEDLRAALNAFLYRTSDQS--SRIMLV 450
+F+ A S+ +VFIDE DA R+R + +++ +N L S S ++++
Sbjct: 334 LFEKAK-SKAPCIVFIDEIDAVGRQRGAGMGGGNDEREQTINQLLTEMDGFSGNSGVIVL 392
Query: 451 LASNTPQQFDSAI--NDRLDKMIEFGLPALEERERLIRLY 488
A+N P DSA+ R D+ + P + R ++++++
Sbjct: 393 AATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVQILKVH 432
>At1g50250.1 68414.m05634 cell division protein ftsH homolog 1,
chloroplast (FTSH1) (FTSH) identical to SP:Q39102 Cell
division protein ftsH homolog 1, chloroplast
precursor (EC 3.4.24.-) [Arabidopsis thaliana]
Length = 716
Score = 56.8 bits (131), Expect = 4e-08
Identities = 42/160 (26%), Positives = 79/160 (49%), Gaps = 8/160 (5%)
Query: 336 KNTRLNKGFYRNLLMYGPPGTGKTLFSKKLAKHSGMDYAIMTGGDVAPMGKDAVAA-IHK 394
K T L + L+ GPPGTGKTL ++ +A +G+ + + + A+ +
Sbjct: 286 KYTALGAKIPKGCLLVGPPGTGKTLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRD 345
Query: 395 VFDWANTSRKGVLVFIDEADAFLRKRSSEK--ISEDLRAALNAFLYRTSDQS--SRIMLV 450
+F+ A S+ +VFIDE DA R+R + +++ +N L S S ++++
Sbjct: 346 LFEKAK-SKAPCIVFIDEIDAVGRQRGAGMGGGNDEREQTINQLLTEMDGFSGNSGVIVL 404
Query: 451 LASNTPQQFDSAI--NDRLDKMIEFGLPALEERERLIRLY 488
A+N P DSA+ R D+ + P + R ++++++
Sbjct: 405 AATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVKILQVH 444
>At5g20000.1 68418.m02380 26S proteasome AAA-ATPase subunit,
putative almost identical to 26S proteasome AAA-ATPase
subunit RPT6a GI:6652888 from [Arabidopsis thaliana];
almost identical to a member of conserved Sug1 CAD
family AtSUG1 GI:13537115 from [Arabidopsis thaliana]
Length = 419
Score = 56.4 bits (130), Expect = 5e-08
Identities = 44/165 (26%), Positives = 80/165 (48%), Gaps = 9/165 (5%)
Query: 346 RNLLMYGPPGTGKTLFSKKLAKHSGMDYAIMTGGD-VAPMGKDAVAAIHKVFDWANTSRK 404
+ +L+YGPPGTGKTL ++ +A H+ + ++G + V + + ++F A
Sbjct: 196 KGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAP 255
Query: 405 GVLVFIDEAD----AFLRKRSSEKISEDLRAALNAFLYRTS-DQSSRIMLVLASNTPQQF 459
+ +F+DE D A + S SE R L + S++I +++A+N
Sbjct: 256 SI-IFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDIL 314
Query: 460 DSAI--NDRLDKMIEFGLPALEERERLIRLYFDKFVLQPASEGKR 502
D A+ R+D+ IEF P E R +++++ K L + K+
Sbjct: 315 DQALLRPGRIDRKIEFPNPNEESRFDILKIHSRKMNLMRGIDLKK 359
>At5g19990.1 68418.m02379 26S proteasome AAA-ATPase subunit (RPT6a)
Length = 419
Score = 56.4 bits (130), Expect = 5e-08
Identities = 44/165 (26%), Positives = 80/165 (48%), Gaps = 9/165 (5%)
Query: 346 RNLLMYGPPGTGKTLFSKKLAKHSGMDYAIMTGGD-VAPMGKDAVAAIHKVFDWANTSRK 404
+ +L+YGPPGTGKTL ++ +A H+ + ++G + V + + ++F A
Sbjct: 196 KGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAP 255
Query: 405 GVLVFIDEAD----AFLRKRSSEKISEDLRAALNAFLYRTS-DQSSRIMLVLASNTPQQF 459
+ +F+DE D A + S SE R L + S++I +++A+N
Sbjct: 256 SI-IFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDIL 314
Query: 460 DSAI--NDRLDKMIEFGLPALEERERLIRLYFDKFVLQPASEGKR 502
D A+ R+D+ IEF P E R +++++ K L + K+
Sbjct: 315 DQALLRPGRIDRKIEFPNPNEESRFDILKIHSRKMNLMRGIDLKK 359
>At5g58870.1 68418.m07376 FtsH protease, putative contains
similarity to cell division protein FtsH homolog 3
SP:P73437 (EC 3.4.24.-) [strain PCC6803] {Synechocystis
sp.}
Length = 806
Score = 54.8 bits (126), Expect = 2e-07
Identities = 63/234 (26%), Positives = 105/234 (44%), Gaps = 17/234 (7%)
Query: 315 LAGVVLAPN-LEQRLRDIAIATKNTRLNKGFYRNLLMYGPPGTGKTLFSKKLAKHSGMDY 373
+AGV A LE+ + + + RL R +L+ G PGTGKTL +K +A S + +
Sbjct: 331 VAGVDEAKEELEEIVEFLKNPDRYVRLGARPPRGVLLVGLPGTGKTLLAKAVAGESDVPF 390
Query: 374 AIMTGGDVAPM--GKDAVAAIHKVFDWANTSRKGVLVFIDEADAFLRKRSSE--KISEDL 429
+ + + G A + + +F A + +FIDE DA + R + +S D
Sbjct: 391 ISCSASEFVELYVGMGA-SRVRDLFARAKKEAPSI-IFIDEIDAVAKSRDGKFRMVSNDE 448
Query: 430 R-AALNAFLYRTS--DQSSRIMLVLASNTPQQFDSAIN--DRLDKMIEFGLPALEERERL 484
R LN L D SS ++++ A+N D A+ R D+++ P RE +
Sbjct: 449 REQTLNQLLTEMDGFDSSSAVIVLGATNRADVLDPALRRPGRFDRVVTVESPDKVGRESI 508
Query: 485 IRLYFDKFVLQPASEGKRRLSVDQFD---YGALCSTLATRTAGMSGRALSKLGV 535
++++ K L P + S+ GA + L A ++GR SK+ V
Sbjct: 509 LKVHVSKKEL-PLGDDVNLASIASMTTGFTGADLANLVNEAALLAGRK-SKMTV 560
>At2g22795.1 68415.m02704 expressed protein
Length = 734
Score = 54.8 bits (126), Expect = 2e-07
Identities = 38/153 (24%), Positives = 74/153 (48%), Gaps = 5/153 (3%)
Query: 31 STNLSKSERKAMEAYRFDSSALERAASAAKELERSRHAKDALELSKLQESTRQQEQMAKI 90
S++ K+E K E + +SS LE E + + + + + T+ E+ +
Sbjct: 479 SSSQEKNEDKETE--KIESSFLEETKEKEDETKEKEESSSQEKTEEKETETKDNEESSSQ 536
Query: 91 KEYEAAIEQAKVEQKKVDYEERRKTLQEETKQHQMRAQYQDQLAKKRYEEQLVQQQKSQE 150
+E + E K+E+++ +E K + ETK+ + + Q++ +K E+ ++ QE
Sbjct: 537 EETKDK-ENEKIEKEEASSQEESKENETETKEKE-ESSSQEETKEKENEKIEKEESAPQE 594
Query: 151 EILRKQEESVAKQE-ALRRATIEHEMELREKNK 182
E K+ E + K+E A + T E E E +EK +
Sbjct: 595 ETKEKENEKIEKEESASQEETKEKETETKEKEE 627
Score = 50.0 bits (114), Expect = 5e-06
Identities = 41/158 (25%), Positives = 76/158 (48%), Gaps = 11/158 (6%)
Query: 36 KSERKAMEAYRFDSSALERAASAAKELERSRHAKDA-LELSKLQESTRQQ--EQMAKIKE 92
++E K E +++ A +++E S K+ E K++ S ++ E+ + KE
Sbjct: 451 ETETKEKEESSSQEETMDKETEAKEKVESSSQEKNEDKETEKIESSFLEETKEKEDETKE 510
Query: 93 YEAAIEQAKVEQKKVDYEERRKTL-QEETKQHQMR------AQYQDQLAKKRYEEQLVQQ 145
E + Q K E+K+ + ++ ++ QEETK + A Q++ + E + ++
Sbjct: 511 KEESSSQEKTEEKETETKDNEESSSQEETKDKENEKIEKEEASSQEESKENETETKEKEE 570
Query: 146 QKSQEEILRKQEESVAKQE-ALRRATIEHEMELREKNK 182
SQEE K+ E + K+E A + T E E E EK +
Sbjct: 571 SSSQEETKEKENEKIEKEESAPQEETKEKENEKIEKEE 608
Score = 46.8 bits (106), Expect = 4e-05
Identities = 37/136 (27%), Positives = 69/136 (50%), Gaps = 8/136 (5%)
Query: 53 ERAASAAKELERSRHAKDALELSKLQESTRQQEQMAKIKEYEAAIEQAKVEQKKVDYEER 112
E ++S K E+ KD E S QE T+ +E KI++ EA+ ++ E + E+
Sbjct: 512 EESSSQEKTEEKETETKDNEESSS-QEETKDKEN-EKIEKEEASSQEESKENETETKEKE 569
Query: 113 RKTLQEETKQHQMRAQYQDQLA-----KKRYEEQLVQQQK-SQEEILRKQEESVAKQEAL 166
+ QEETK+ + +++ A K++ E++ +++ SQEE K+ E+ K+E+
Sbjct: 570 ESSSQEETKEKENEKIEKEESAPQEETKEKENEKIEKEESASQEETKEKETETKEKEESS 629
Query: 167 RRATIEHEMELREKNK 182
+ E+ EK +
Sbjct: 630 SNESQENVNTESEKKE 645
Score = 44.0 bits (99), Expect = 3e-04
Identities = 28/125 (22%), Positives = 63/125 (50%), Gaps = 5/125 (4%)
Query: 35 SKSERKAMEAYRFDSSALERAASAAKELERSRHAKDALELSKLQESTRQQEQMAKIKEYE 94
S+ E K E + + E A+S + E K+ E S QE T+++E KI++ E
Sbjct: 535 SQEETKDKENEKIEK---EEASSQEESKENETETKEKEESSS-QEETKEKEN-EKIEKEE 589
Query: 95 AAIEQAKVEQKKVDYEERRKTLQEETKQHQMRAQYQDQLAKKRYEEQLVQQQKSQEEILR 154
+A ++ E++ E+ QEETK+ + + +++ + +E + + + +E++
Sbjct: 590 SAPQEETKEKENEKIEKEESASQEETKEKETETKEKEESSSNESQENVNTESEKKEQVEE 649
Query: 155 KQEES 159
++++
Sbjct: 650 NEKKT 654
Score = 41.1 bits (92), Expect = 0.002
Identities = 28/126 (22%), Positives = 65/126 (51%), Gaps = 4/126 (3%)
Query: 56 ASAAKELERSRHAKDALELSKLQESTRQQEQMAKIKEYEAAIEQAKV-EQKKVDYEERRK 114
+S+ +E + + K E + QE +++ E K KE ++ E+ K E +K++ EE
Sbjct: 533 SSSQEETKDKENEKIEKEEASSQEESKENETETKEKEESSSQEETKEKENEKIEKEESAP 592
Query: 115 TLQEETKQHQ-MRAQYQDQLAKKRYEEQLVQQQKSQEEILRKQEESVAKQEALRRATIEH 173
QEETK+ + + + ++ +++ +E+ + ++ +E + +E+V + + E+
Sbjct: 593 --QEETKEKENEKIEKEESASQEETKEKETETKEKEESSSNESQENVNTESEKKEQVEEN 650
Query: 174 EMELRE 179
E + E
Sbjct: 651 EKKTDE 656
Score = 39.1 bits (87), Expect = 0.009
Identities = 41/159 (25%), Positives = 77/159 (48%), Gaps = 25/159 (15%)
Query: 48 DSSALERAASAAKELERSRHA--KDALELS-------------KLQESTRQQEQMAKIKE 92
D + E + +++E + + + KD E S + +ES+ Q+E M K E
Sbjct: 413 DGGSQETSEVSSQEESKGKESETKDKEESSSQEESKDRETETKEKEESSSQEETMDKETE 472
Query: 93 YEAAIE---QAKVEQKKVD-----YEERRKTLQEETKQHQMRAQYQDQLAKKRYEEQLVQ 144
+ +E Q K E K+ + + E K ++ETK+ + + Q++ +K E + +
Sbjct: 473 AKEKVESSSQEKNEDKETEKIESSFLEETKEKEDETKEKE-ESSSQEKTEEKETETKDNE 531
Query: 145 QQKSQEEILRKQEESVAKQEA-LRRATIEHEMELREKNK 182
+ SQEE K+ E + K+EA + + E+E E +EK +
Sbjct: 532 ESSSQEETKDKENEKIEKEEASSQEESKENETETKEKEE 570
Score = 36.7 bits (81), Expect = 0.047
Identities = 31/119 (26%), Positives = 55/119 (46%), Gaps = 7/119 (5%)
Query: 48 DSSALERAASAAKELERSR-HAKDALELSKLQESTRQQEQMAKIKEYEAAIE-QAKVE-- 103
++ +E+ SA +E + + + K E S QE T+++E K KE ++ E Q V
Sbjct: 581 ENEKIEKEESAPQEETKEKENEKIEKEESASQEETKEKETETKEKEESSSNESQENVNTE 640
Query: 104 -QKKVDYEERRKTLQEETKQHQMRAQYQDQLAKKRYE--EQLVQQQKSQEEILRKQEES 159
+KK EE K E+T + D K+ E E+ + + E+ ++Q +S
Sbjct: 641 SEKKEQVEENEKKTDEDTSESSKENSVSDTEQKQSEETSEKEESNKNGETEVTQEQSDS 699
Score = 35.5 bits (78), Expect = 0.11
Identities = 26/124 (20%), Positives = 56/124 (45%), Gaps = 4/124 (3%)
Query: 60 KELERSRHAKDALELSKLQESTRQQEQMAKIKEYEAAIEQAKVEQKKVDYEERRKTLQEE 119
+E KD E K+++ ++ +K E E ++ Q++ +E K +EE
Sbjct: 531 EESSSQEETKDK-ENEKIEKEEASSQEESKENETETKEKEESSSQEETKEKENEKIEKEE 589
Query: 120 TKQHQMRAQYQDQLAKKRYEEQLVQQQKSQEEILRKQEESVAKQEALRRATIEHE-MELR 178
+ + + +++ +K EE Q++ ++E K++E + E+ E E E
Sbjct: 590 SAPQEETKEKENEKIEK--EESASQEETKEKETETKEKEESSSNESQENVNTESEKKEQV 647
Query: 179 EKNK 182
E+N+
Sbjct: 648 EENE 651
Score = 35.1 bits (77), Expect = 0.14
Identities = 32/155 (20%), Positives = 75/155 (48%), Gaps = 15/155 (9%)
Query: 35 SKSERKAMEAYRFDSSALERAASAAKELERSRHAKDALELSKLQESTRQQEQMAKIKEYE 94
S+ E K E ++ E ++S + +++ AK+ K++ S++++ + + ++ E
Sbjct: 443 SQEESKDRET---ETKEKEESSSQEETMDKETEAKE-----KVESSSQEKNEDKETEKIE 494
Query: 95 AAIEQAKVEQKKVDYEERRKTLQEETKQHQM------RAQYQDQLAKKRYEEQLVQQQKS 148
++ + E++ E+ + QE+T++ + + Q++ K E+ ++ S
Sbjct: 495 SSFLEETKEKEDETKEKEESSSQEKTEEKETETKDNEESSSQEETKDKENEKIEKEEASS 554
Query: 149 QEEILRKQEESVAKQE-ALRRATIEHEMELREKNK 182
QEE + E+ K+E + + T E E E EK +
Sbjct: 555 QEESKENETETKEKEESSSQEETKEKENEKIEKEE 589
>At3g15120.1 68416.m01913 AAA-type ATPase family protein contains
PROSITE domains, PS00674: AAA-protein family signature
and PS00017: ATP/GTP-binding site motif A (P-loop)
Length = 1954
Score = 53.6 bits (123), Expect = 4e-07
Identities = 47/159 (29%), Positives = 79/159 (49%), Gaps = 16/159 (10%)
Query: 346 RNLLMYGPPGTGKTLFSK----KLAK-HSGMDYAIMTGGDVAPMGK---DAVAAIHKVFD 397
R +L++G PGTGKTL + LA+ + + Y G D +GK DA + +F
Sbjct: 754 RGILLHGHPGTGKTLVVRALIGSLARGNRRIAYFARKGADC--LGKYVGDAERQLRLLFQ 811
Query: 398 WANTSRKGVLVFIDEADAFLRKRS--SEKISEDLRAALNAFLYRTSDQSSRIMLVLASNT 455
A + + +F DE D KRS ++ + + L A L + S ++++ A+N
Sbjct: 812 VAEKCQPSI-IFFDEIDGLAPKRSRQQDQTHSSVVSTLLALLDGLKSRGS-VVVIGATNY 869
Query: 456 PQQFDSAIN--DRLDKMIEFGLPALEERERLIRLYFDKF 492
P D A+ R D+ I F LP++++R +I L+ K+
Sbjct: 870 PDAIDPALRRPGRFDREIYFPLPSVDDRAAIISLHTRKW 908
>At3g16290.1 68416.m02056 FtsH protease, putative contains
similarity to cell division protein FtsH GI:1652085 from
[Synechocystis sp. PCC 6803]
Length = 876
Score = 53.2 bits (122), Expect = 5e-07
Identities = 48/179 (26%), Positives = 85/179 (47%), Gaps = 11/179 (6%)
Query: 348 LLMYGPPGTGKTLFSKKLAKHSGMDYAIMTGGDVAPMGKDAVAA-IHKVFDWANTSRKGV 406
+L+ GPPG GKTL +K +A +G+++ ++ + A+ + ++ A + V
Sbjct: 446 ILLCGPPGVGKTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRALYQEARENAPSV 505
Query: 407 LVFIDEADAFLRKRSSEKIS--EDLRAALNAFLYRTSDQSSR--IMLVLASNTPQQFDSA 462
VFIDE DA R+R K S ++ A LN L R ++ + ++N P D A
Sbjct: 506 -VFIDELDAVGRERGLIKGSGGQERDATLNQLLVSLDGFEGRGEVITIASTNRPDILDPA 564
Query: 463 I--NDRLDKMIEFGLPALEERERLIRLYFDKFVLQPASEGKRRLSVDQFDYGALCSTLA 519
+ R D+ I P L R +++++ K +P +E ++V G + + LA
Sbjct: 565 LVRPGRFDRKIFIPKPGLIGRMEILQVHARK---KPMAEDLDYMAVASMTDGMVGAELA 620
Score = 33.1 bits (72), Expect = 0.57
Identities = 16/63 (25%), Positives = 36/63 (57%), Gaps = 2/63 (3%)
Query: 66 RHAKDALELSKLQESTRQQ--EQMAKIKEYEAAIEQAKVEQKKVDYEERRKTLQEETKQH 123
+ +K A EL +++E ++Q E++ +KE +E+ QKK ++RK ++++ +
Sbjct: 220 KESKRAAELKRMREDFKRQRKEEIETMKEERVMMEKTMKAQKKQQERKKRKAVRKKKYEE 279
Query: 124 QMR 126
+R
Sbjct: 280 SLR 282
Score = 30.3 bits (65), Expect = 4.0
Identities = 17/74 (22%), Positives = 41/74 (55%), Gaps = 5/74 (6%)
Query: 82 RQQEQMAKIKEYEAAIEQAKVEQKKVDYEER---RKTLQEETKQHQMRAQYQDQLAKKRY 138
++ ++ A++K ++ + E+ + EER KT++ + KQ + + + + KK+Y
Sbjct: 220 KESKRAAELKRMREDFKRQRKEEIETMKEERVMMEKTMKAQKKQQERKKR--KAVRKKKY 277
Query: 139 EEQLVQQQKSQEEI 152
EE L + +K+ ++
Sbjct: 278 EESLREARKNYRDM 291
>At5g04890.1 68418.m00513 small heat shock-like protein (RTM2)
similar to 17.9 kDa heat-shock protein [Helianthus
annuus] GI:11990130; contains Pfam profile PF00011:
Hsp20/alpha crystallin family; supporting cDNA
gi|7407072|gb|AF208051.1|AF208051; identical to cDNA
small heat shock-like protein (RTM2) GI:7407072, small
heat shock-like protein [Arabidopsis thaliana]
GI:7407073
Length = 366
Score = 52.4 bits (120), Expect = 9e-07
Identities = 36/121 (29%), Positives = 63/121 (52%), Gaps = 6/121 (4%)
Query: 36 KSERKAMEAYRFDSSALERAASAAKELERSRHAKDALELSKLQESTRQQEQMAKIKEYEA 95
+ E++ EA + LE + ++L+ AK+ E+ KLQE + +E+ A K E
Sbjct: 140 RKEKEEEEAKQMKKQLLEEKEALIRKLQEEAKAKEEAEMRKLQEEAKAKEEAAAKKLQEE 199
Query: 96 AIEQAKVEQKKVDYEERRKTLQEETKQHQMRAQYQDQLAKKRYEEQLVQQQKSQEEILRK 155
+ K+E++K+ EERR EE K M+ + +L KK E + V + +E+IL+
Sbjct: 200 IEAKEKLEERKL--EERR---LEERKLEDMKLAEEAKL-KKIQERKSVDESGEKEKILKP 253
Query: 156 Q 156
+
Sbjct: 254 E 254
Score = 46.8 bits (106), Expect = 4e-05
Identities = 34/89 (38%), Positives = 59/89 (66%), Gaps = 7/89 (7%)
Query: 95 AAIEQA-KVEQKKVDYEERRKTLQEETKQHQMRAQYQDQLAKKRYEEQLVQQQKSQEEI- 152
AA+E+A K+E+K++ E RRK +EE + QM+ Q ++ K+ +L ++ K++EE
Sbjct: 121 AALEKAAKLEEKRLLEESRRKE-KEEEEAKQMKKQLLEE--KEALIRKLQEEAKAKEEAE 177
Query: 153 LRK-QEESVAKQEALRRATIEHEMELREK 180
+RK QEE+ AK+EA + ++ E+E +EK
Sbjct: 178 MRKLQEEAKAKEEAAAK-KLQEEIEAKEK 205
Score = 37.9 bits (84), Expect = 0.020
Identities = 28/123 (22%), Positives = 66/123 (53%), Gaps = 7/123 (5%)
Query: 48 DSSALERAASAAKELERSR-HAKDALELSKLQESTRQQE--QMAKIKEYEAAIEQAKVEQ 104
+S E+ AK++++ K+AL + KLQE + +E +M K++E A E+A ++
Sbjct: 137 ESRRKEKEEEEAKQMKKQLLEEKEAL-IRKLQEEAKAKEEAEMRKLQEEAKAKEEAAAKK 195
Query: 105 KKVDYEERRKTLQEETKQHQM-RAQYQDQLAKKRYEEQLVQQQKSQEEILRKQEESVAKQ 163
+ + E + K + + ++ ++ + +D + + + +Q++KS +E ++E + K
Sbjct: 196 LQEEIEAKEKLEERKLEERRLEERKLEDMKLAEEAKLKKIQERKSVDE--SGEKEKILKP 253
Query: 164 EAL 166
E +
Sbjct: 254 EVV 256
>At3g47060.1 68416.m05110 FtsH protease, putative contains
similarity to FtsH protease GI:13183728 from [Medicago
sativa]
Length = 802
Score = 51.2 bits (117), Expect = 2e-06
Identities = 48/187 (25%), Positives = 86/187 (45%), Gaps = 12/187 (6%)
Query: 315 LAGVVLAPN-LEQRLRDIAIATKNTRLNKGFYRNLLMYGPPGTGKTLFSKKLAKHSGMDY 373
+AGV A LE+ + + K RL R +L+ G PGTGKTL +K +A + + +
Sbjct: 327 VAGVDEAKEELEEIVEFLRNPEKYVRLGARPPRGVLLVGLPGTGKTLLAKAVAGEAEVPF 386
Query: 374 AIMTGGDVAPM--GKDAVAAIHKVFDWANTSRKGVLVFIDEADAFLRKRSSE---KISED 428
+ + + G A + + +F A + +FIDE DA + R + +++
Sbjct: 387 ISCSASEFVELYVGMGA-SRVRDLFARAKKEAPSI-IFIDEIDAVAKSRDGKFRMGSNDE 444
Query: 429 LRAALNAFLYRTS--DQSSRIMLVLASNTPQQFDSAIN--DRLDKMIEFGLPALEERERL 484
LN L D +S ++++ A+N D A+ R D+++ P RE +
Sbjct: 445 REQTLNQLLTEMDGFDSNSAVIVLGATNRADVLDPALRRPGRFDRVVTVETPDKIGRESI 504
Query: 485 IRLYFDK 491
+R++ K
Sbjct: 505 LRVHVSK 511
>At4g04910.1 68417.m00714 AAA-type ATPase family protein similar to
SP|P18708 Vesicular-fusion protein NSF
(N-ethylmaleimide-sensitive fusion protein)
(NEM-sensitive fusion protein) {Cricetulus griseus};
contains Pfam profiles PF00004: ATPase AAA family,
PF02359: Cell division protein 48 (CDC48) N-terminal
domain; contains non-consensus AT-AC splice sites at
intron 2
Length = 742
Score = 49.2 bits (112), Expect = 8e-06
Identities = 39/168 (23%), Positives = 82/168 (48%), Gaps = 14/168 (8%)
Query: 338 TRLNKGFYRNLLMYGPPGTGKTLFSKKLAKH-SGMDYAIMTGGDV-APMGKDAVAAIHKV 395
+RL + +L++GPPGTGKTL ++++ K +G D I+ G +V + + + +
Sbjct: 243 SRLGIKHVKGMLLFGPPGTGKTLMARQIGKMLNGKDPKIVNGPEVLSKFVGETEKNVRDL 302
Query: 396 FDWANTSRKGV-------LVFIDEADAFLRKRSSEKISEDLR-AALNAFLYRTS--DQSS 445
F A ++ + ++ DE DA + R S + + + +N L + + +
Sbjct: 303 FADAEQDQRTLGDASELHVIIFDEIDAICKSRGSTRDGTGVHDSIVNQLLTKIDGVEALN 362
Query: 446 RIMLVLASNTPQQFDSAI--NDRLDKMIEFGLPALEERERLIRLYFDK 491
++L+ +N D A+ RL+ +E LP R ++++++ +K
Sbjct: 363 NVLLIGMTNRKDLLDEALLRPGRLEVQVEISLPDEAGRLQILQIHTNK 410
>At3g28770.1 68416.m03591 expressed protein
Length = 2081
Score = 48.8 bits (111), Expect = 1e-05
Identities = 36/154 (23%), Positives = 77/154 (50%), Gaps = 8/154 (5%)
Query: 31 STNLSKSERKAMEAYRFDSSALERAASAAKELERSRHAKDALELSKLQESTRQQEQMAKI 90
+ L K E E + ++S L+ KE + S + SK +E +E+ +K
Sbjct: 968 NNELKKQEDNKKETTKSENSKLKEENKDNKEKKESEDSA-----SKNREKKEYEEKKSKT 1022
Query: 91 KEYEAAIEQAKVEQKKVDYE--ERRKTLQEETKQHQMRAQYQDQLAKKRYEEQLVQQQKS 148
KE EA E+ K + KK + + E RK+ +E+ + ++A+ +++ K++ E + + +K
Sbjct: 1023 KE-EAKKEKKKSQDKKREEKDSEERKSKKEKEESRDLKAKKKEEETKEKKESENHKSKKK 1081
Query: 149 QEEILRKQEESVAKQEALRRATIEHEMELREKNK 182
+++ + +S+ K+E + E + R+K +
Sbjct: 1082 EDKKEHEDNKSMKKEEDKKEKKKHEESKSRKKEE 1115
Score = 46.8 bits (106), Expect = 4e-05
Identities = 39/155 (25%), Positives = 79/155 (50%), Gaps = 11/155 (7%)
Query: 35 SKSERKAMEAYRFDSSALERAASAAKELERSRHAKDALELSKLQESTRQQEQMAKI---K 91
S ++K + + ++ L++ KE +S ++K E +E ++ +K K
Sbjct: 954 SNMKKKEEDKKEYVNNELKKQEDNKKETTKSENSKLKEENKDNKEKKESEDSASKNREKK 1013
Query: 92 EYEAA----IEQAKVEQKKVDYEERRKTLQEETKQHQMRAQYQDQLAKKRYEEQLVQQQK 147
EYE E+AK E+KK ++R + EE K + + + +D AKK+ EE+ ++++
Sbjct: 1014 EYEEKKSKTKEEAKKEKKKSQDKKREEKDSEERKSKKEKEESRDLKAKKK-EEETKEKKE 1072
Query: 148 SQEEILRKQEESVAKQEALRRATIEHEMELREKNK 182
S+ +K+E+ K+E +++ E + +EK K
Sbjct: 1073 SENHKSKKKED---KKEHEDNKSMKKEEDKKEKKK 1104
Score = 43.6 bits (98), Expect = 4e-04
Identities = 33/155 (21%), Positives = 81/155 (52%), Gaps = 10/155 (6%)
Query: 36 KSERKAMEAYRFDSSAL--ERAASAAKELERSRHAK---DALELSKLQESTRQQEQMAKI 90
KS++K + D+ ++ E K+ E S+ K D ++ KL++ +++ K
Sbjct: 1077 KSKKKEDKKEHEDNKSMKKEEDKKEKKKHEESKSRKKEEDKKDMEKLEDQNSNKKKEDKN 1136
Query: 91 KEYEAAIEQAKVEQKKVDYEERRKTLQE-ETKQHQMRAQYQDQLAKKRYEEQLVQQQKSQ 149
++ ++ + K+ +K+ D +E+++ ++ ETK+ + ++++ KK + QQ+K +
Sbjct: 1137 EKKKS--QHVKLVKKESDKKEKKENEEKSETKEIESSKSQKNEVDKKEKKSSKDQQKKKE 1194
Query: 150 EEILRKQEESVAKQEALRR--ATIEHEMELREKNK 182
+E+ +E+ + K E R+ ++E + +E K
Sbjct: 1195 KEMKESEEKKLKKNEEDRKKQTSVEENKKQKETKK 1229
Score = 42.7 bits (96), Expect = 7e-04
Identities = 31/147 (21%), Positives = 70/147 (47%), Gaps = 9/147 (6%)
Query: 36 KSERKAMEAYRFDSSALERAASAAKELERSRHAKDALELSKLQESTRQQEQMAKIKEYEA 95
K E K + + E + K+ E ++ E SKL+E + ++ KE E
Sbjct: 948 KKESKNSNMKKKEEDKKEYVNNELKKQEDNKKETTKSENSKLKEENKDNKEK---KESE- 1003
Query: 96 AIEQAKVEQKKVDYEERRKTLQEETKQHQMRAQYQDQLAKKRYEEQLVQQQKSQEEILRK 155
+ A ++K +YEE++ +EE K+ + ++Q + + K E + ++++ ++ K
Sbjct: 1004 --DSASKNREKKEYEEKKSKTKEEAKKEKKKSQDKKREEKDSEERKSKKEKEESRDLKAK 1061
Query: 156 QEESVAKQEALRRATIEHEMELREKNK 182
++E K+ ++ + H+ + +E K
Sbjct: 1062 KKEEETKE---KKESENHKSKKKEDKK 1085
Score = 40.7 bits (91), Expect = 0.003
Identities = 34/157 (21%), Positives = 81/157 (51%), Gaps = 15/157 (9%)
Query: 36 KSERKAMEAYRFDSSALERAASAAKELERSRHAKDALELSKLQESTRQQEQ----MAKIK 91
K ++K+ + R + + ER + KE R AK K +E T+++++ +K K
Sbjct: 1028 KEKKKSQDKKREEKDSEERKSKKEKEESRDLKAK------KKEEETKEKKESENHKSKKK 1081
Query: 92 EYEAAIEQAKVEQKKVDYEERRKTLQEETKQHQM----RAQYQDQLAKKRYEEQLVQQQK 147
E + E K +K+ D +E++K + ++++ + + +DQ + K+ E++ +++
Sbjct: 1082 EDKKEHEDNKSMKKEEDKKEKKKHEESKSRKKEEDKKDMEKLEDQNSNKKKEDKNEKKKS 1141
Query: 148 SQEEILRKQEESVAKQEALRRA-TIEHEMELREKNKL 183
++++K+ + K+E ++ T E E +KN++
Sbjct: 1142 QHVKLVKKESDKKEKKENEEKSETKEIESSKSQKNEV 1178
Score = 39.1 bits (87), Expect = 0.009
Identities = 26/150 (17%), Positives = 74/150 (49%), Gaps = 3/150 (2%)
Query: 35 SKSERKAMEAYRFDSSALERAASAAKELERSRHAKDALELSKLQESTRQQEQMAKIKEYE 94
+KSE ++ D+ + + +A + + ++ +K + +++ K +E +
Sbjct: 982 TKSENSKLKEENKDNKEKKESEDSASKNREKKEYEEKKSKTKEEAKKEKKKSQDKKREEK 1041
Query: 95 AAIEQAKVEQKKVDYEERRKTLQEETKQHQMRAQYQDQLA--KKRYEEQLVQQQKSQEEI 152
+ E+ ++K+ + + K +EETK+ + ++ + KK +E+ +++ ++
Sbjct: 1042 DSEERKSKKEKEESRDLKAKKKEEETKEKKESENHKSKKKEDKKEHEDNKSMKKEEDKKE 1101
Query: 153 LRKQEESVAKQEALRRATIEHEMELREKNK 182
+K EES ++++ + +E ++E + NK
Sbjct: 1102 KKKHEESKSRKKEEDKKDME-KLEDQNSNK 1130
Score = 36.3 bits (80), Expect = 0.062
Identities = 32/147 (21%), Positives = 62/147 (42%), Gaps = 7/147 (4%)
Query: 36 KSERKAMEAYRFDSSALERAASAAKELERSRHAKDALELSKLQESTRQQEQMAKIKEYEA 95
K E E + + S + K++E+ + E + Q KE +
Sbjct: 1094 KKEEDKKEKKKHEESKSRKKEEDKKDMEKLEDQNSNKKKEDKNEKKKSQHVKLVKKESDK 1153
Query: 96 AIEQAKVEQKKVDYEERRKTLQEETKQHQMRAQYQDQLAKKRYEEQLVQQQKSQEEILRK 155
++ E+ + E K+ + E + + ++ +DQ KK E ++S+E+ L+K
Sbjct: 1154 KEKKENEEKSETKEIESSKSQKNEVDKKEKKSS-KDQQKKKEKE-----MKESEEKKLKK 1207
Query: 156 QEESVAKQEALRRATIEHEMELREKNK 182
EE KQ ++ + E + +EKNK
Sbjct: 1208 NEEDRKKQTSVEENKKQKETK-KEKNK 1233
Score = 35.9 bits (79), Expect = 0.081
Identities = 23/114 (20%), Positives = 55/114 (48%), Gaps = 1/114 (0%)
Query: 69 KDALELSKLQESTRQQEQMAKIKEYEAAIEQAKVEQKKVDYEERRKTLQEETKQHQMRAQ 128
KD + K +++ +++ KEY + + + KK + L+EE K ++ + +
Sbjct: 942 KDKKKKKKESKNSNMKKKEEDKKEYVNNELKKQEDNKKETTKSENSKLKEENKDNKEKKE 1001
Query: 129 YQDQLAKKRYEEQLVQQQKSQEEILRKQEESVAKQEALRRATIEHEMELREKNK 182
+D +K R E++ +++KS+ + K+E+ ++ + E +EK +
Sbjct: 1002 SEDSASKNR-EKKEYEEKKSKTKEEAKKEKKKSQDKKREEKDSEERKSKKEKEE 1054
Score = 35.5 bits (78), Expect = 0.11
Identities = 29/135 (21%), Positives = 60/135 (44%), Gaps = 4/135 (2%)
Query: 36 KSERKAMEAYRFDSSALERAASAAKELERSRHAKDALELSKLQESTRQQEQMAKIKEYEA 95
K E+K E + ++ +E + S E+++ + K ++ ++ E+ K E
Sbjct: 1153 KKEKKENEE-KSETKEIESSKSQKNEVDKKEKKSSKDQQKKKEKEMKESEEKKLKKNEED 1211
Query: 96 AIEQAKVEQKKVDYEERR-KTLQEETKQHQMRAQYQDQLAKKRYEEQLVQQQKSQEEILR 154
+Q VE+ K E ++ K ++ K++ + + + + ++ QQKSQ
Sbjct: 1212 RKKQTSVEENKKQKETKKEKNKPKDDKKNTTKQSGGKKESMESESKEAENQQKSQATTQA 1271
Query: 155 KQEESVAKQEALRRA 169
+ES K E L +A
Sbjct: 1272 DSDES--KNEILMQA 1284
Score = 31.1 bits (67), Expect = 2.3
Identities = 23/88 (26%), Positives = 47/88 (53%), Gaps = 7/88 (7%)
Query: 96 AIEQAKVEQKKVDYEERRKTLQEETKQHQMRAQYQDQLAKKRYEEQLVQQQKSQEEILRK 155
+++ K E+K+ + EE + T+ +KQ + +D+ KK+ E + +K +E+
Sbjct: 913 SVKYKKDEKKEGNKEENKDTINTSSKQ-----KGKDKKKKKK-ESKNSNMKKKEEDKKEY 966
Query: 156 QEESVAKQEALRRATIEHE-MELREKNK 182
+ KQE ++ T + E +L+E+NK
Sbjct: 967 VNNELKKQEDNKKETTKSENSKLKEENK 994
>At5g55820.1 68418.m06956 expressed protein
Length = 1826
Score = 47.6 bits (108), Expect = 2e-05
Identities = 41/142 (28%), Positives = 72/142 (50%), Gaps = 5/142 (3%)
Query: 40 KAMEAYRFDSSALERAASAAKELERSRHAKDALELSKLQE-STRQQEQMAKIKEYEAAIE 98
+A EA + + E KE + AK E K QE +++E+ K KE E A +
Sbjct: 1523 EAAEASKRIAEQKENDRKLKKEAMKLERAKQEQENLKKQEIEKKKKEEDRKKKEAEMAWK 1582
Query: 99 QAKVEQKKVDYEERRKTLQEETKQHQMRAQYQDQLAKKRYEEQLVQQQKSQEEILRK-QE 157
Q ++E+KK + E +RK + ++ Q R + +L + + +++ Q+ Q E K Q
Sbjct: 1583 Q-EMEKKKKEEERKRKEFEMADRKRQ-REEEDKRLKEAKKRQRIADFQRQQREADEKLQA 1640
Query: 158 ESVAKQEALRRATIEHEMELRE 179
E K++A+ A I+ + EL+E
Sbjct: 1641 EKELKRQAM-DARIKAQKELKE 1661
Score = 42.3 bits (95), Expect = 0.001
Identities = 34/119 (28%), Positives = 64/119 (53%), Gaps = 7/119 (5%)
Query: 68 AKDALELSKLQESTRQQEQMAKIKEYEAAIEQAKVEQ---KKVDYEERRKTLQEETKQHQ 124
A +A E SK Q+E K+K+ +E+AK EQ KK + E+++K + K+ +
Sbjct: 1521 ALEAAEASK--RIAEQKENDRKLKKEAMKLERAKQEQENLKKQEIEKKKKEEDRKKKEAE 1578
Query: 125 MRAQYQDQLAKKRYEEQLVQQQKSQEEILRKQEESVAKQEALRRATI-EHEMELREKNK 182
M A Q+ KK+ EE+ ++ + + +++EE +EA +R I + + + RE ++
Sbjct: 1579 M-AWKQEMEKKKKEEERKRKEFEMADRKRQREEEDKRLKEAKKRQRIADFQRQQREADE 1636
Score = 41.9 bits (94), Expect = 0.001
Identities = 31/134 (23%), Positives = 62/134 (46%), Gaps = 1/134 (0%)
Query: 36 KSERKAMEAYRFDSSALERAASAAKELERSRHAKDALELSKLQESTRQQEQMAKIKEYEA 95
K E +E + + L++ K+ E R K+A K + +++E+ K KE+E
Sbjct: 1542 KKEAMKLERAKQEQENLKKQEIEKKKKEEDRKKKEAEMAWKQEMEKKKKEEERKRKEFEM 1601
Query: 96 AIEQAKVEQKKVDYEERRKTLQEETKQHQMRAQYQDQLAKKRYEEQLVQQQ-KSQEEILR 154
A + + E++ +E +K + Q Q R + A+K + Q + + K+Q+E+
Sbjct: 1602 ADRKRQREEEDKRLKEAKKRQRIADFQRQQREADEKLQAEKELKRQAMDARIKAQKELKE 1661
Query: 155 KQEESVAKQEALRR 168
Q + ++A R
Sbjct: 1662 DQNNAEKTRQANSR 1675
Score = 37.5 bits (83), Expect = 0.027
Identities = 30/96 (31%), Positives = 53/96 (55%), Gaps = 7/96 (7%)
Query: 89 KIKEYEAAIEQAKV-EQKKVDYEERRKTLQ-EETKQHQMRAQYQDQLAKKRYEEQLVQQQ 146
K+K EAA ++ EQK+ D + +++ ++ E KQ Q + Q ++ KK+ EE ++
Sbjct: 1518 KVKALEAAEASKRIAEQKENDRKLKKEAMKLERAKQEQENLKKQ-EIEKKKKEE---DRK 1573
Query: 147 KSQEEILRKQEESVAKQEALRRATIEHEMELREKNK 182
K + E+ KQE K+E R+ E EM R++ +
Sbjct: 1574 KKEAEMAWKQEMEKKKKEEERKRK-EFEMADRKRQR 1608
Score = 34.7 bits (76), Expect = 0.19
Identities = 25/127 (19%), Positives = 69/127 (54%), Gaps = 5/127 (3%)
Query: 60 KELERSRHAKDALELSKLQESTRQQE-QMAKIKEYEAAIEQAKVEQKKVDYEERRKTLQE 118
K LE + +K E + +++ ++ + K+ + +++ ++E+KK + E+R+K E
Sbjct: 1520 KALEAAEASKRIAEQKENDRKLKKEAMKLERAKQEQENLKKQEIEKKKKE-EDRKKKEAE 1578
Query: 119 ETKQHQMRAQYQDQLAKKRYEEQLVQQQKSQEEILRKQEESVAKQEA--LRRATIEHEME 176
+ +M + +++ +KR E ++ +++ +EE ++ +E+ +Q +R E + +
Sbjct: 1579 MAWKQEMEKKKKEE-ERKRKEFEMADRKRQREEEDKRLKEAKKRQRIADFQRQQREADEK 1637
Query: 177 LREKNKL 183
L+ + +L
Sbjct: 1638 LQAEKEL 1644
>At5g53350.1 68418.m06630 ATP-dependent Clp protease ATP-binding
subunit ClpX1 (CLPX) identical to CLP protease
regulatory subunit CLPX GI:2674203 from [Arabidopsis
thaliana]
Length = 579
Score = 47.6 bits (108), Expect = 2e-05
Identities = 29/89 (32%), Positives = 48/89 (53%), Gaps = 6/89 (6%)
Query: 347 NLLMYGPPGTGKTLFSKKLAKHSGMDYAI---MTGGDVAPMGKDAVAAIHK---VFDWAN 400
N+L+ GP G+GKTL +K LA+ + + I T +G+D + ++K V D+
Sbjct: 225 NILLMGPTGSGKTLLAKTLARFVNVPFVIADATTLTQAGYVGEDVESILYKLLTVADYNV 284
Query: 401 TSRKGVLVFIDEADAFLRKRSSEKISEDL 429
+ + +V+IDE D +K S IS D+
Sbjct: 285 AAAQQGIVYIDEVDKITKKAESLNISRDV 313
>At4g23940.1 68417.m03443 FtsH protease, putative contains
similarity to zinc dependent protease GI:7650138 from
[Arabidopsis thaliana]
Length = 946
Score = 47.6 bits (108), Expect = 2e-05
Identities = 42/159 (26%), Positives = 75/159 (47%), Gaps = 16/159 (10%)
Query: 348 LLMYGPPGTGKTLFSKKLAKHSGMDYAIMTGGD-VAPMGKDAVAAIHKVFDWANTSRKGV 406
+L+ GPPG GKTL +K +A +G+ + M G + V + A I +F A ++ V
Sbjct: 466 VLLEGPPGCGKTLVAKAIAGEAGVPFYQMAGSEFVEVLVGVGSARIRDLFKRAKVNKPSV 525
Query: 407 LVFIDEADAFLRKR------SSEKI----SEDLRAALNAFLYRTS--DQSSRIMLVLASN 454
+FIDE DA +R +S+++ +++ LN L D ++ + A+N
Sbjct: 526 -IFIDEIDALATRRQGIFKENSDQLYNAATQERETTLNQLLIELDGFDTGKGVIFLGATN 584
Query: 455 TPQQFDSAI--NDRLDKMIEFGLPALEERERLIRLYFDK 491
D A+ R D+ I P + R +++++ K
Sbjct: 585 RRDLLDPALLRPGRFDRKIRVRPPNAKGRLDILKIHASK 623
>At1g10890.1 68414.m01251 F-box family protein contains Pfam
PF00646: F-box domain; contains TIGRFAM TIGR01640 :
F-box protein interaction domain
Length = 592
Score = 47.6 bits (108), Expect = 2e-05
Identities = 39/154 (25%), Positives = 81/154 (52%), Gaps = 10/154 (6%)
Query: 36 KSERKAMEAYRFDSSALERAASAA-KELERSRHA-KDALELSKLQESTRQ---QEQMAKI 90
K ++ E + ++R A K++E S + K +E+ L E R+ +E A++
Sbjct: 71 KRRQREAELKLIEEETVKRVEEAIRKKVEESLQSEKIKMEILTLLEEGRKRLNEEVAAQL 130
Query: 91 KEYEAA--IEQAKVEQKKVDYEERRKTLQEETKQHQMRAQYQDQLAKKRYEEQLVQQQKS 148
+E + A IE + E+++ +E R+ + EE + AQ ++ + ++R EE+ + +
Sbjct: 131 EEEKEASLIEAKEKEEREQQEKEERERIAEENLKRVEEAQRKEAMERQRKEEE---RYRE 187
Query: 149 QEEILRKQEESVAKQEALRRATIEHEMELREKNK 182
EE+ R++EE++ +++A +M+L KNK
Sbjct: 188 LEELQRQKEEAMRRKKAEEEEERLKQMKLLGKNK 221
Score = 35.1 bits (77), Expect = 0.14
Identities = 37/180 (20%), Positives = 79/180 (43%), Gaps = 5/180 (2%)
Query: 50 SALERAASAAKELERSRHAKDALELSKLQESTRQQEQMAKIKEYEAAIEQAKVEQKKVDY 109
S +R+ +A E ++R+ + L+ + + RQ+E K+ E E + +KKV+
Sbjct: 42 SPAKRSPAATLESAKNRNG-EKLKREEEERKRRQREAELKLIEEETVKRVEEAIRKKVEE 100
Query: 110 EERRKTLQEE--TKQHQMRAQYQDQLAKKRYEEQLVQQQKSQEEILRKQEESVAKQEALR 167
+ + ++ E T + R + +++A + EE+ +++E+ R+Q+E ++E +
Sbjct: 101 SLQSEKIKMEILTLLEEGRKRLNEEVAAQLEEEKEASLIEAKEKEEREQQEK-EERERIA 159
Query: 168 RATIEHEMELREKNKLXXXXXXXXXXXXXXXXNRDINLEQIRLKAAENRVTILESIKTAG 227
++ E + K + R E +R K AE L+ +K G
Sbjct: 160 EENLKRVEEAQRKEAMERQRKEEERYRELEELQRQ-KEEAMRRKKAEEEEERLKQMKLLG 218
>At1g33360.1 68414.m04129 ATP-dependent Clp protease ATP-binding
subunit ClpX, putative similar to CLP protease
regulatory subunit CLPX GI:2674203 from [Arabidopsis
thaliana]
Length = 656
Score = 47.2 bits (107), Expect = 3e-05
Identities = 32/99 (32%), Positives = 50/99 (50%), Gaps = 9/99 (9%)
Query: 337 NTRLNKGFYRNLLMYGPPGTGKTLFSKKLAKHSGMDYAI---MTGGDVAPMGKDAVAAIH 393
N L+K N+L+ GP G+GKTL +K LA+ + + I T +G D + +H
Sbjct: 303 NVELDKS---NVLLMGPTGSGKTLLAKTLARLVNVPFVIADATTLTQAGYVGDDVESILH 359
Query: 394 KVFDWANTSRKGV---LVFIDEADAFLRKRSSEKISEDL 429
K+ A + + +V+IDE D +K S IS D+
Sbjct: 360 KLLTVAEFNVQAAQQGIVYIDEVDKITKKAESLNISRDV 398
>At1g25540.1 68414.m03171 phytochrome and flowering time regulatory
protein (PFT1) PMID: 12815435
Length = 836
Score = 46.8 bits (106), Expect = 4e-05
Identities = 20/73 (27%), Positives = 48/73 (65%), Gaps = 1/73 (1%)
Query: 79 ESTRQQEQMAKIKEYEAAIEQAKVEQKKVDYEERRKTLQEETKQHQMRAQYQDQLAKKRY 138
+ +QQ+Q+ + ++ + I+Q + +Q+ + +++ LQ++ +QHQ + Q Q QL++ ++
Sbjct: 681 QQQQQQQQLHQQQQQQQQIQQQQQQQQHLQ-QQQMPQLQQQQQQHQQQQQQQHQLSQLQH 739
Query: 139 EEQLVQQQKSQEE 151
+Q QQQ+ Q++
Sbjct: 740 HQQQQQQQQQQQQ 752
Score = 37.1 bits (82), Expect = 0.035
Identities = 20/88 (22%), Positives = 48/88 (54%), Gaps = 5/88 (5%)
Query: 78 QESTRQQEQMAKIKEYEAAIEQAKVEQKKVDYEERRKTLQEETKQHQMRAQYQDQLAKKR 137
Q+ +QQ+Q +I++ + + + +Q +++++ Q++ +QHQ+ QL +
Sbjct: 687 QQLHQQQQQQQQIQQQQQQQQHLQQQQMPQLQQQQQQHQQQQQQQHQL-----SQLQHHQ 741
Query: 138 YEEQLVQQQKSQEEILRKQEESVAKQEA 165
++Q QQQ+ Q ++ + Q +Q+A
Sbjct: 742 QQQQQQQQQQQQHQLTQLQHHHQQQQQA 769
Score = 33.1 bits (72), Expect = 0.57
Identities = 15/83 (18%), Positives = 46/83 (55%)
Query: 93 YEAAIEQAKVEQKKVDYEERRKTLQEETKQHQMRAQYQDQLAKKRYEEQLVQQQKSQEEI 152
++ I + +Q++ ++++++ Q + +Q Q + Q Q+ + + ++Q QQQ+ Q+
Sbjct: 674 FKPQIPNQQQQQQQQLHQQQQQQQQIQQQQQQQQHLQQQQMPQLQQQQQQHQQQQQQQHQ 733
Query: 153 LRKQEESVAKQEALRRATIEHEM 175
L + + +Q+ ++ +H++
Sbjct: 734 LSQLQHHQQQQQQQQQQQQQHQL 756
Score = 31.9 bits (69), Expect = 1.3
Identities = 12/66 (18%), Positives = 39/66 (59%)
Query: 117 QEETKQHQMRAQYQDQLAKKRYEEQLVQQQKSQEEILRKQEESVAKQEALRRATIEHEME 176
Q++ +Q + Q Q Q+ +++ ++Q +QQQ+ + ++Q+ +Q+ + + ++H +
Sbjct: 683 QQQQQQLHQQQQQQQQIQQQQQQQQHLQQQQMPQLQQQQQQHQQQQQQQHQLSQLQHHQQ 742
Query: 177 LREKNK 182
+++ +
Sbjct: 743 QQQQQQ 748
Score = 31.1 bits (67), Expect = 2.3
Identities = 19/102 (18%), Positives = 51/102 (50%), Gaps = 7/102 (6%)
Query: 76 KLQESTRQQEQMAKIKEYEAAIEQAKVEQKKVDYEERRKTLQEE-----TKQHQMRAQYQ 130
+L + +QQ+Q+ + ++ + ++Q ++ Q + ++ ++ Q++ + HQ + Q Q
Sbjct: 688 QLHQQQQQQQQIQQQQQQQQHLQQQQMPQLQQQQQQHQQQQQQQHQLSQLQHHQQQQQQQ 747
Query: 131 DQLAKKRYEEQLV--QQQKSQEEILRKQEESVAKQEALRRAT 170
Q ++ QL QQ+ Q L + ++ + +++ T
Sbjct: 748 QQQQQQHQLTQLQHHHQQQQQASPLNQMQQQTSPLNQMQQQT 789
>At3g12550.1 68416.m01562 XH/XS domain-containing protein / XS zinc
finger domain-containing protein contains Pfam domains
PF03469: XH domain, PF03468: XS domain and PF03470: XS
zinc finger domain
Length = 635
Score = 44.8 bits (101), Expect = 2e-04
Identities = 41/121 (33%), Positives = 61/121 (50%), Gaps = 10/121 (8%)
Query: 72 LELSKLQ-ESTRQQEQMAKIKEYEAAIEQ----AKVEQKKVDYEERRKTLQEETKQHQMR 126
LEL+K + E+ Q++ +AK E AAI + +EQ+K + +R + + K H+
Sbjct: 344 LELAKREAENETQRKIVAKELEQNAAINSYVQLSALEQQKTREKAQRLAVDHKEKLHKRI 403
Query: 127 AQYQDQLAKKRYEEQLVQQQKSQEEILRKQE-----ESVAKQEALRRATIEHEMELREKN 181
A + QL +K+ E VQQ KSQ ++R E E V K E R E E EL N
Sbjct: 404 AALERQLDQKQELELEVQQLKSQLSVMRLVELDSGSEIVNKVETFLRDLSETEGELAHLN 463
Query: 182 K 182
+
Sbjct: 464 Q 464
>At4g36520.1 68417.m05185 trichohyalin-related low similarity to
SP|Q07283 Trichohyalin {Homo sapiens}
Length = 1400
Score = 44.4 bits (100), Expect = 2e-04
Identities = 27/100 (27%), Positives = 54/100 (54%), Gaps = 5/100 (5%)
Query: 63 ERSRHAKDALELS----KLQESTRQQEQMAKIKEYEAAIEQAKVEQKKVDYEERRKTLQE 118
E R AK+ LE + KL+E+ Q+E ++KE E K ++ ++ EE+ K L E
Sbjct: 787 ENERRAKEVLEQAENERKLKEALEQKENERRLKETREKEENKKKLREAIELEEKEKRLIE 846
Query: 119 ETKQHQMRAQYQDQLAKKRYEEQLVQQQKSQEEILRKQEE 158
++ ++ + ++ L ++ +L Q+ K +E + R+ +E
Sbjct: 847 AFERAEIERRLKEDLEQEEMRMRL-QEAKERERLHRENQE 885
Score = 44.0 bits (99), Expect = 3e-04
Identities = 45/163 (27%), Positives = 82/163 (50%), Gaps = 18/163 (11%)
Query: 28 AAPSTNLSKSERKAMEAYRFDSSALERAASAAKELERSRHAKDALELSK---LQESTRQQ 84
A + ++ ERK E + L+ A +E R R A ALE K ++E+ ++
Sbjct: 690 AVEAREKAEQERKMKEQQELELQ-LKEAFEKEEENRRMREAF-ALEQEKERRIKEAREKE 747
Query: 85 EQMAKIKEYEAAIEQAKVEQK---KVDYEERRKTLQE--ETKQHQMRAQYQDQLAKKRYE 139
E +IKE A E+A++EQ+ ++ EE+ + ++E E ++++ RA+ + A+ +
Sbjct: 748 ENERRIKE---AREKAELEQRLKATLEQEEKERQIKERQEREENERRAKEVLEQAENERK 804
Query: 140 EQLVQQQKSQEEILRKQEESVAKQEALRRATIEHEMELREKNK 182
+ +QK E L++ E ++ LR A +EL EK K
Sbjct: 805 LKEALEQKENERRLKETREKEENKKKLREA-----IELEEKEK 842
Score = 43.2 bits (97), Expect = 5e-04
Identities = 40/194 (20%), Positives = 86/194 (44%), Gaps = 6/194 (3%)
Query: 35 SKSERKAMEAYRF--DSSALERAASAAKELERSRHAKDALELSK-LQESTRQQEQMAKIK 91
S+SE K E + + + ++ A + R R A + E K L+ + Q+E+ KIK
Sbjct: 619 SQSETKLNEPLKRMEEETRIKEARLREENDRRERVAVEKAENEKRLKAALEQEEKERKIK 678
Query: 92 E-YEAAIEQAKVEQKKVDYEERRKTLQEETKQHQMRAQYQDQLAKKRYEEQLVQQQKSQE 150
E E A + + + + E+ RK +++ + Q++ ++ + +R E +Q+ +
Sbjct: 679 EAREKAENERRAVEAREKAEQERKMKEQQELELQLKEAFEKEEENRRMREAFALEQEKER 738
Query: 151 EILRKQEESVAKQEALRRATIEHEMELREKNKLXXXXXXXXXXXXXXXXNRDINLEQIRL 210
I ++ E + ++ A + E+E R K L + +++ L
Sbjct: 739 RI-KEAREKEENERRIKEAREKAELEQRLKATLEQEEKERQIKERQEREENERRAKEV-L 796
Query: 211 KAAENRVTILESIK 224
+ AEN + E+++
Sbjct: 797 EQAENERKLKEALE 810
>At5g08470.1 68418.m00999 peroxisome biogenesis protein (PEX1)
identical to peroxisome biogenesis protein PEX1
[Arabidopsis thaliana] gi|12006272|gb|AAG44817; contains
Pfam profile PF00004: ATPase, AAA family; identical to
cDNA peroxisome biogenesis protein PEX1 (PEX1) mRNA,
partial cds GI:12006271
Length = 1130
Score = 43.6 bits (98), Expect = 4e-04
Identities = 55/233 (23%), Positives = 102/233 (43%), Gaps = 14/233 (6%)
Query: 272 IEARIGKPTLVNETSRFSLGEAVKHPILTVSKAVSSF-RKPQDALAGVVLAPNLEQRLRD 330
+E+ I K LV E ++ + V + ++K+ S R + + GV N + +
Sbjct: 802 LESNISKYNLVKEDFTRAMHDFVPVAMRDITKSASEGGRLGWEDVGGVTDIKNAIKEM-- 859
Query: 331 IAIATKNTRL-NKGFYR---NLLMYGPPGTGKTLFSKKLAKHSGMDYAIMTGGDVAPMGK 386
I + +K ++ K R N+L+YGPPG GKT A + + + G ++
Sbjct: 860 IELPSKFPKIFAKSPLRLRSNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYI 919
Query: 387 DA-VAAIHKVFDWANTSRKGVLVFIDEADAFLRKRSSEKISEDLRAALNAFLYRTS--DQ 443
A A+ +F A + +L F DE D+ KR + R +N FL +
Sbjct: 920 GASEQAVRDIFSKAAAAAPCIL-FFDEFDSIAPKRGHDNTGVTDR-VVNQFLTELDGVEV 977
Query: 444 SSRIMLVLASNTPQQFDSAI--NDRLDKMIEFGLPALEERERLIRLYFDKFVL 494
+ + + A++ P D A+ RLD+++ P+ ER ++ + K ++
Sbjct: 978 LTGVFVFAATSRPDLLDPALLRPGRLDRLLLCDFPSPPERLEILTVLSRKLLM 1030
Score = 33.1 bits (72), Expect = 0.57
Identities = 11/22 (50%), Positives = 19/22 (86%)
Query: 347 NLLMYGPPGTGKTLFSKKLAKH 368
++L+YGPPG+GKT+ ++ AK+
Sbjct: 595 HILIYGPPGSGKTILARAAAKY 616
>At5g13340.1 68418.m01535 expressed protein
Length = 242
Score = 43.2 bits (97), Expect = 5e-04
Identities = 32/95 (33%), Positives = 56/95 (58%), Gaps = 12/95 (12%)
Query: 91 KEYEAAIEQA--KVEQKKVDYEERRKTLQEETKQHQMRAQYQDQLAKKRYEEQLVQQQKS 148
KE EAA+ +A K EQ + + EE K L+E +++ + +Q ++ + +R EE+ ++
Sbjct: 142 KEKEAALNEARRKEEQARREREELDKMLEENSRRVE-ESQRREAMELQRKEEERYREL-- 198
Query: 149 QEEILRKQEESVAKQEALRRATIEHEMELREKNKL 183
E+L++Q K+EA RR +E E E+R +KL
Sbjct: 199 --ELLQRQ-----KEEAARRKKLEEEEEIRNSSKL 226
Score = 39.1 bits (87), Expect = 0.009
Identities = 34/128 (26%), Positives = 61/128 (47%), Gaps = 9/128 (7%)
Query: 59 AKELERSRHAKDALELSKLQESTRQQEQMAKIKEYEAAIEQAKVEQKKVDYEERRKTLQE 118
+ L S H + A+E+ K QE + + A++K E Q E + + EER KT E
Sbjct: 59 SSSLSPSEH-RIAIEVKKEQEDKARLQHEAELKRLEEETAQRIEEAVRKNVEERMKT--E 115
Query: 119 ETKQHQMRAQYQDQLAKKRYEEQLVQQQKSQE----EILRKQEESVAKQEALRRATIEHE 174
E K+ R + +K + + +Q +K +E E RK+E++ ++E L + E+
Sbjct: 116 EVKEEIERR--TKEAYEKMFLDVEIQLKKEKEAALNEARRKEEQARREREELDKMLEENS 173
Query: 175 MELREKNK 182
+ E +
Sbjct: 174 RRVEESQR 181
Score = 30.3 bits (65), Expect = 4.0
Identities = 19/72 (26%), Positives = 37/72 (51%), Gaps = 2/72 (2%)
Query: 50 SALERAASAAKELERSRHAKDAL--ELSKLQESTRQQEQMAKIKEYEAAIEQAKVEQKKV 107
+AL A ++ R R D + E S+ E ++++E M ++ E + ++ Q++
Sbjct: 146 AALNEARRKEEQARREREELDKMLEENSRRVEESQRREAMELQRKEEERYRELELLQRQK 205
Query: 108 DYEERRKTLQEE 119
+ RRK L+EE
Sbjct: 206 EEAARRKKLEEE 217
>At4g11420.1 68417.m01840 eukaryotic translation initiation factor 3
subunit 10 / eIF-3 theta / eIF3a (TIF3A1) identical to
eukaryotic translation initiation factor 3 subunit 10
(eIF-3 theta) (Eukaryotic translation initiation factor
3 large subunit) (eIF3a) (p114). [Arabidopsis thaliana]
SWISS-PROT:Q9LD55
Length = 987
Score = 43.2 bits (97), Expect = 5e-04
Identities = 30/134 (22%), Positives = 63/134 (47%), Gaps = 4/134 (2%)
Query: 53 ERAASAAKELERSRHAKDALELSKLQESTRQQE--QMAKIKEYEAAIEQAKVE-QKKVDY 109
ER EL + RH D E ++L +E Q I +A ++ + E ++++
Sbjct: 719 EREQQREVELSKERHESDLKEKNRLSRMLGNKEIFQAQVISRRQAEFDRIRTEREERISK 778
Query: 110 EERRKTLQEETKQHQMR-AQYQDQLAKKRYEEQLVQQQKSQEEILRKQEESVAKQEALRR 168
R K + + K+ Q+ + +++ +K EE+ ++Q+ E + + + E A +
Sbjct: 779 IIREKKQERDIKRKQIYYLKIEEERIRKLQEEEEARKQEEAERLKKVEAERKANLDKAFE 838
Query: 169 ATIEHEMELREKNK 182
+ E+EL EK++
Sbjct: 839 KQRQREIELEEKSR 852
Score = 42.7 bits (96), Expect = 7e-04
Identities = 40/176 (22%), Positives = 68/176 (38%), Gaps = 2/176 (1%)
Query: 51 ALERAASAAKELERSRHAKDALELSKLQESTRQQEQMAKIKEYEAAIEQAKVEQKKVDYE 110
A E A + + R K+ E L E T ++ + K K + K K+
Sbjct: 609 AAELAERRKQRILREIEEKELEEAQALLEETEKRMKKGKKKPLLDGEKVTKQSVKERALT 668
Query: 111 ERRKTLQEETKQHQMRAQYQDQLAKKRYEEQLVQQQKSQEEILRKQEESVAK--QEALRR 168
E+ K QE K+ Q A+ D L + + EE + + + L ++ E + Q +
Sbjct: 669 EQLKERQEMEKKLQKLAKTMDYLERAKREEAAPLIEAAYQRRLVEEREFYEREQQREVEL 728
Query: 169 ATIEHEMELREKNKLXXXXXXXXXXXXXXXXNRDINLEQIRLKAAENRVTILESIK 224
+ HE +L+EKN+L R ++IR + E I+ K
Sbjct: 729 SKERHESDLKEKNRLSRMLGNKEIFQAQVISRRQAEFDRIRTEREERISKIIREKK 784
Score = 33.1 bits (72), Expect = 0.57
Identities = 31/153 (20%), Positives = 67/153 (43%), Gaps = 6/153 (3%)
Query: 33 NLSKSERKAMEAYRFDSSALERAASAAKELERSRHAKDALELSKLQESTRQQEQMAKIKE 92
NL+ + K + S +E+ + + ++ + KLQ+ T + EQ E
Sbjct: 552 NLADTVEKEHKRLLARKSIIEKRKEDQERQQLEMEREEEQKRLKLQKLTEEAEQKRLAAE 611
Query: 93 YEAAIEQAKVEQKKVDYEERRKTLQEETKQHQMRAQYQ-----DQLAKKRYEEQ-LVQQQ 146
+Q + + + E + L EET++ + + + +++ K+ +E+ L +Q
Sbjct: 612 LAERRKQRILREIEEKELEEAQALLEETEKRMKKGKKKPLLDGEKVTKQSVKERALTEQL 671
Query: 147 KSQEEILRKQEESVAKQEALRRATIEHEMELRE 179
K ++E+ +K ++ + L RA E L E
Sbjct: 672 KERQEMEKKLQKLAKTMDYLERAKREEAAPLIE 704
Score = 32.3 bits (70), Expect = 1.0
Identities = 22/136 (16%), Positives = 71/136 (52%), Gaps = 7/136 (5%)
Query: 34 LSKSERKAM-EAYRFDSSALERAASAAKELERSRHAKDALELSKLQESTRQQEQMAKIKE 92
+ K ++K + + + +++ A + ER K +L+K + + ++
Sbjct: 643 MKKGKKKPLLDGEKVTKQSVKERALTEQLKERQEMEKKLQKLAKTMDYLERAKREEAAPL 702
Query: 93 YEAAIEQAKVEQKKVDYEERRKTLQEETKQHQMRAQYQDQLA-----KKRYEEQLVQQQK 147
EAA ++ VE+++ E+++ ++ ++H+ + +++L+ K+ ++ Q++ +++
Sbjct: 703 IEAAYQRRLVEEREFYEREQQREVELSKERHESDLKEKNRLSRMLGNKEIFQAQVISRRQ 762
Query: 148 SQ-EEILRKQEESVAK 162
++ + I ++EE ++K
Sbjct: 763 AEFDRIRTEREERISK 778
>At2g35330.1 68415.m04332 zinc finger (C3HC4-type RING finger)
protein-related contains weak hit to Pfam profile:
PF00097 zinc finger, C3HC4 type (RING finger); weak
similarity to RING finger protein 8 (Swiss-Prot:O76064)
[Homo sapiens]
Length = 738
Score = 43.2 bits (97), Expect = 5e-04
Identities = 35/138 (25%), Positives = 64/138 (46%), Gaps = 1/138 (0%)
Query: 44 AYRFDSSALERAASAAKELER-SRHAKDALELSKLQESTRQQEQMAKIKEYEAAIEQAKV 102
A R S +++A + + LE S + +E SKL S M K+ + +++
Sbjct: 471 ALRKASGQVDKANAVVRALENESAEIRAEMEASKLSASESLTACMEASKKEKKCLKKLLA 530
Query: 103 EQKKVDYEERRKTLQEETKQHQMRAQYQDQLAKKRYEEQLVQQQKSQEEILRKQEESVAK 162
+K+ + T ++E + RA Q +K YE + Q+QK++E++L + EE
Sbjct: 531 WEKQKMKLQDEITAEKEKIKALNRALAQITQEEKEYEAKWRQEQKAKEQVLAQVEEEQRS 590
Query: 163 QEALRRATIEHEMELREK 180
+EA+ + LR K
Sbjct: 591 KEAIEASNKRKVESLRLK 608
Score = 37.1 bits (82), Expect = 0.035
Identities = 38/157 (24%), Positives = 74/157 (47%), Gaps = 11/157 (7%)
Query: 37 SERKAMEAYRFDS---SALERAASAAKELERSRHAKDALELSKLQESTRQQEQMAK---- 89
+++KAM+A + S S L+ S +E++R + K E S L++ + + + K
Sbjct: 419 AQKKAMQAAQKVSDELSELKSLRSEREEIQRVKKGKQTREDSTLKKLSEMENALRKASGQ 478
Query: 90 IKEYEAAIEQAKVEQKKVDYE-ERRKTLQEETKQHQMRAQYQDQLAKKRYEEQLVQQQKS 148
+ + A + + E ++ E E K E+ M A +++ K+ Q+ K
Sbjct: 479 VDKANAVVRALENESAEIRAEMEASKLSASESLTACMEASKKEKKCLKKLLAWEKQKMKL 538
Query: 149 QEEILRKQEESVAKQEALRRAT---IEHEMELREKNK 182
Q+EI ++E+ A AL + T E+E + R++ K
Sbjct: 539 QDEITAEKEKIKALNRALAQITQEEKEYEAKWRQEQK 575
Score = 34.3 bits (75), Expect = 0.25
Identities = 34/127 (26%), Positives = 61/127 (48%), Gaps = 8/127 (6%)
Query: 33 NLSKSERKAMEAYRFDSS-ALERAASAAKELERSRHAKDALELSKLQESTRQQEQMAKIK 91
N S R MEA + +S +L A+K+ ++ A E K++ + KIK
Sbjct: 491 NESAEIRAEMEASKLSASESLTACMEASKKEKKCLKKLLAWEKQKMKLQDEITAEKEKIK 550
Query: 92 EYEAAIEQAKVEQKKVDYEERRKTLQEETKQHQMRAQYQDQLAKKRYEEQLVQQQKSQEE 151
A+ A++ Q++ +YE K QE+ + Q+ AQ +++ +R +E + K + E
Sbjct: 551 ALNRAL--AQITQEEKEYE--AKWRQEQKAKEQVLAQVEEE---QRSKEAIEASNKRKVE 603
Query: 152 ILRKQEE 158
LR + E
Sbjct: 604 SLRLKIE 610
Score = 29.9 bits (64), Expect = 5.4
Identities = 27/110 (24%), Positives = 50/110 (45%), Gaps = 6/110 (5%)
Query: 69 KDALELSKLQESTRQQEQMAKIKEYEAAIEQAKVEQKKVDYEERRKTLQEETKQHQMRAQ 128
KD + LQ+ ++Q+ + K++ A + + QK D K+L+ E ++ Q
Sbjct: 394 KDDALIGLLQQVQDLKKQLKERKDW-AQKKAMQAAQKVSDELSELKSLRSEREEIQ---- 448
Query: 129 YQDQLAKKRYEEQLVQQQKSQEEILRKQEESVAKQEALRRATIEHEMELR 178
+ + K+ E+ +++ E LRK V K A+ RA E+R
Sbjct: 449 -RVKKGKQTREDSTLKKLSEMENALRKASGQVDKANAVVRALENESAEIR 497
>At1g03080.1 68414.m00282 kinase interacting family protein similar
to kinase interacting protein 1 (GI:13936326) [Petunia
integrifolia]
Length = 1744
Score = 43.2 bits (97), Expect = 5e-04
Identities = 38/153 (24%), Positives = 67/153 (43%), Gaps = 5/153 (3%)
Query: 34 LSKSERKAMEAYRFDSSALERAASAAKELERSRHAKDALELSKLQESTRQQEQMAKIKEY 93
LS E + A +ERA A E+E R + +E+ K + Q+ + I +
Sbjct: 243 LSNLESEVSRAQEDSRVLIERATRAEAEVETLRESLSKVEVEKESSLLQYQQCLQNIADL 302
Query: 94 EAAIEQAKVEQKKVDYEERRKTLQEET---KQHQMRAQYQDQLAKKRYEEQLVQQQKSQE 150
E I A+ E +VD ER + ET KQ + ++ + A +Y++ L +E
Sbjct: 303 EDRISLAQKEAGEVD--ERANRAEAETLALKQSLVSSETDKEAALVQYQQCLKTISNLEE 360
Query: 151 EILRKQEESVAKQEALRRATIEHEMELREKNKL 183
+ + +E+S + A E E ++ +KL
Sbjct: 361 RLHKAEEDSRLTNQRAENAEGEVESLKQKVSKL 393
Score = 29.9 bits (64), Expect = 5.4
Identities = 25/113 (22%), Positives = 56/113 (49%), Gaps = 4/113 (3%)
Query: 49 SSALERAASAAKELE-RSRHAKDALELSK-LQESTRQQEQMAKIKEYEAAIEQAKVEQKK 106
S + E ++ A EL+ RS+ KD + LQE ++ + +K A ++ +
Sbjct: 510 SQSQEELSTLALELQNRSQILKDMEARNNGLQEEVQEAKDQSKSLNELNLSSAASIKSLQ 569
Query: 107 VDYEERRKTLQEETKQHQMRAQYQDQLAKKRY--EEQLVQQQKSQEEILRKQE 157
+ + R+T+Q+ + ++R ++ L ++ Y +E+L Q K + ++ + E
Sbjct: 570 EEVSKLRETIQKLEAEVELRVDQRNALQQEIYCLKEELSQIGKKHQSMVEQVE 622
>At1g76810.1 68414.m08938 eukaryotic translation initiation factor 2
family protein / eIF-2 family protein similar to IF2
protein [Drosophila melanogaster] GI:7108770; contains
Pfam profile PF03144: Elongation factor Tu domain 2
Length = 1294
Score = 42.7 bits (96), Expect = 7e-04
Identities = 31/146 (21%), Positives = 78/146 (53%), Gaps = 10/146 (6%)
Query: 32 TNLSKSERKAMEAYRFDSSALERAASAAKELERSRHAKDALE----LSKLQESTRQQEQM 87
T +K ++K E + +A AA+++ E++ + + E K + ++++
Sbjct: 350 TAAAKKKKKKKEKEKEKKAAAAAAATSSVEVKEEKQEESVTEPLQPKKKDAKGKAAEKKI 409
Query: 88 AK-IKEYEAAI---EQAKVEQKKVDYEERRKTLQEETKQHQMRAQYQD--QLAKKRYEEQ 141
K ++E + A+ ++A+ +KK + E+ RK +E +Q ++ AQ ++ + K++ +E+
Sbjct: 410 PKHVREMQEALARRQEAEERKKKEEEEKLRKEEEERRRQEELEAQAEEAKRKRKEKEKEK 469
Query: 142 LVQQQKSQEEILRKQEESVAKQEALR 167
L++++ + + KQ+ K+EA +
Sbjct: 470 LLRKKLEGKLLTAKQKTEAQKREAFK 495
Score = 40.7 bits (91), Expect = 0.003
Identities = 31/130 (23%), Positives = 67/130 (51%), Gaps = 9/130 (6%)
Query: 53 ERAASAAKELERSRHAKDALELSKLQESTRQQEQMAKIKEYEAAIEQAKVEQKKVDYEER 112
E +AAK+ ++ + + + + +T E K ++ E ++ + +KK + +
Sbjct: 347 EEETAAAKKKKKKKEKEKEKKAAAAAAATSSVE--VKEEKQEESVTEPLQPKKK---DAK 401
Query: 113 RKTLQEETKQHQMRAQYQDQLAKKRYEEQLVQQQKSQEEILRKQEESVAKQEALRRATIE 172
K +++ +H + Q+ LA+++ E+ +++K +EE LRK+EE +QE L E
Sbjct: 402 GKAAEKKIPKHVR--EMQEALARRQEAEE--RKKKEEEEKLRKEEEERRRQEELEAQAEE 457
Query: 173 HEMELREKNK 182
+ + +EK K
Sbjct: 458 AKRKRKEKEK 467
Score = 38.3 bits (85), Expect = 0.015
Identities = 35/135 (25%), Positives = 61/135 (45%), Gaps = 10/135 (7%)
Query: 49 SSALERAASAAKELERSRHAKDALELSKLQESTRQQEQMAKIKEYEAAIEQAKVEQKKVD 108
++A ++ KE E+ A A S + +Q+E + + + + + K +KK+
Sbjct: 351 AAAKKKKKKKEKEKEKKAAAAAAATSSVEVKEEKQEESVTEPLQPKKKDAKGKAAEKKIP 410
Query: 109 YEERRKTLQEETKQHQMRAQYQDQLAKKRYEEQLVQQQKSQEEILRKQEESVAKQEALRR 168
R E ++ R Q ++ KK EE+L + +EE R+QEE A+ E +R
Sbjct: 411 KHVR------EMQEALARRQEAEERKKKEEEEKL----RKEEEERRRQEELEAQAEEAKR 460
Query: 169 ATIEHEMELREKNKL 183
E E E + KL
Sbjct: 461 KRKEKEKEKLLRKKL 475
>At1g65470.1 68414.m07427 chromatin assembly factor-1 (FASCIATA1)
(FAS1) identical to FAS1 [Arabidopsis thaliana]
GI:4887626
Length = 815
Score = 42.7 bits (96), Expect = 7e-04
Identities = 31/143 (21%), Positives = 75/143 (52%), Gaps = 4/143 (2%)
Query: 27 VAAPSTNLSKSERKAMEA-YRFD-SSALERAASAAKELERSRHAKDALEL--SKLQESTR 82
+ A S L+ +R+ E +R D S A E+ E++ + ++ S++ E
Sbjct: 182 ITAVSAMLAALQREETEKLWRSDLSKAAEKLGKILSEVDIRSFMDNMMQKNSSEMAEKDS 241
Query: 83 QQEQMAKIKEYEAAIEQAKVEQKKVDYEERRKTLQEETKQHQMRAQYQDQLAKKRYEEQL 142
++E+ +K+ E +A+ E+K+++ + ++ LQ+E +Q ++ D+ K++ E +
Sbjct: 242 KREEKLLLKQLEKNRCEAEKEKKRMERQVLKEKLQQEKEQKLLQKAIVDENNKEKEETES 301
Query: 143 VQQQKSQEEILRKQEESVAKQEA 165
++ K Q++ K+++ K++A
Sbjct: 302 RKRIKKQQDESEKEQKRREKEQA 324
Score = 39.9 bits (89), Expect = 0.005
Identities = 27/111 (24%), Positives = 59/111 (53%), Gaps = 8/111 (7%)
Query: 60 KELERSR----HAKDALELSKLQESTRQQEQMAKIKEYEAAIEQAKVEQKKVDYEERRKT 115
K+LE++R K +E L+E +Q+++ +++ A +++ E+++ + +R K
Sbjct: 250 KQLEKNRCEAEKEKKRMERQVLKEKLQQEKEQKLLQK--AIVDENNKEKEETESRKRIKK 307
Query: 116 LQEETKQHQMRAQYQDQLAKKRYEEQLVQQQKSQEEILRKQEESVAKQEAL 166
Q+E+++ Q R + + KK+ + Q +Q E L+K ++S Q L
Sbjct: 308 QQDESEKEQKRREKEQAELKKQLQVQ--KQASIMERFLKKSKDSSLTQPKL 356
Score = 33.9 bits (74), Expect = 0.33
Identities = 32/136 (23%), Positives = 66/136 (48%), Gaps = 5/136 (3%)
Query: 50 SALERAASAAKELERSRHAKDALELSKL--QESTRQ-QEQMAKIKEYEAAIEQAKVEQKK 106
+AL+R + ++L RS +K A +L K+ + R + M + E A + +K E+K
Sbjct: 190 AALQREET--EKLWRSDLSKAAEKLGKILSEVDIRSFMDNMMQKNSSEMAEKDSKREEKL 247
Query: 107 VDYEERRKTLQEETKQHQMRAQYQDQLAKKRYEEQLVQQQKSQEEILRKQEESVAKQEAL 166
+ + + + E ++ +M Q + ++ E++L+Q+ E K+E K+
Sbjct: 248 LLKQLEKNRCEAEKEKKRMERQVLKEKLQQEKEQKLLQKAIVDENNKEKEETESRKRIKK 307
Query: 167 RRATIEHEMELREKNK 182
++ E E + REK +
Sbjct: 308 QQDESEKEQKRREKEQ 323
>At1g18410.1 68414.m02299 kinesin motor protein-related similar to
kinesin-related protein GB:AAF24855 GI:6692749 from
[Arabidopsis thaliana]
Length = 1140
Score = 42.7 bits (96), Expect = 7e-04
Identities = 31/132 (23%), Positives = 59/132 (44%), Gaps = 3/132 (2%)
Query: 52 LERAASAAKELERSRHAKDALELSKLQESTRQQEQMAKIKEYEAAIEQAKVEQKKVDYEE 111
+ER S E R++++ K Q + E +A E E++K+E+KK D EE
Sbjct: 287 IERRISTQSEHLRTQNSVFKAREEKYQSRIKVLETLASGTSEENETEKSKLEEKKKDKEE 346
Query: 112 RRKTLQEETKQHQMR---AQYQDQLAKKRYEEQLVQQQKSQEEILRKQEESVAKQEALRR 168
+++E + + + + + KK YE+Q +Q + + E+ V + E +R+
Sbjct: 347 DMVGIEKENGHYNLEISTLRRELETTKKAYEQQCLQMESKTKGATAGIEDRVKELEQMRK 406
Query: 169 ATIEHEMELREK 180
L E+
Sbjct: 407 DASVARKALEER 418
Score = 30.7 bits (66), Expect = 3.1
Identities = 23/85 (27%), Positives = 43/85 (50%), Gaps = 5/85 (5%)
Query: 73 ELSKLQESTRQQ--EQMAKIKEYEAAIEQA--KVEQKKVDYEERRKTLQEETKQHQMRAQ 128
EL +++ QQ + +K K A IE ++EQ + D RK L+E ++ + +
Sbjct: 368 ELETTKKAYEQQCLQMESKTKGATAGIEDRVKELEQMRKDASVARKALEERVRELEKMGK 427
Query: 129 YQDQLAKKRYEEQLVQQQKSQEEIL 153
D + K EE++ + QK ++E +
Sbjct: 428 EADAV-KMNLEEKVKELQKYKDETI 451
>At4g32551.1 68417.m04633 WD-40 repeat family protein (LEUNIG)
contains seven G-protein beta WD-40 repeats; beta
transducin-like protein, Podospora anserina, gb:L28125;
contains Pfam profiles PF04503: Single-stranded DNA
binding protein, SSDP; PF00400:WD domain, G-beta repeat;
identical to cDNA LEUNIG (LEUNIG) GI:11141604
Length = 931
Score = 42.3 bits (95), Expect = 0.001
Identities = 21/111 (18%), Positives = 60/111 (54%), Gaps = 1/111 (0%)
Query: 73 ELSKLQESTRQQEQMAKIKEYEAAIEQAKVEQKKVDYEERRKTLQEETKQHQMRAQYQDQ 132
++ K +E QQ Q ++ + + +Q +++ +++ + ++ Q++ +QH Q Q Q
Sbjct: 82 QMIKAREQQLQQSQHPQVSQQQQQQQQQQIQMQQLLLQRAQQQQQQQQQQHHHHQQQQQQ 141
Query: 133 LAKKRYEEQLVQQQKSQEEILRKQEESVAKQEALRRATIEHEMELREKNKL 183
+++ ++Q QQQ+ Q + +Q++ + + ++ T + + + R+ + L
Sbjct: 142 -QQQQQQQQQQQQQQHQNQPPSQQQQQQSTPQHQQQPTPQQQPQRRDGSHL 191
>At4g11100.1 68417.m01802 expressed protein
Length = 287
Score = 42.3 bits (95), Expect = 0.001
Identities = 28/98 (28%), Positives = 51/98 (52%), Gaps = 5/98 (5%)
Query: 63 ERSRHAKDALELSKLQESTRQQEQMAKIKEYEAAIEQAKVEQKKV--DYEERRKTLQEET 120
ER +HA++A E KL + +E K + + E+ KV +EE +KT++ E
Sbjct: 32 ERIKHAEEAYEAIKLHHENKAKELEVSNKRLLEECMKERREKAKVRKTFEEMKKTMESER 91
Query: 121 KQ--HQMRAQYQDQL-AKKRYEEQLVQQQKSQEEILRK 155
+++++ Q+ L KK+ EE+LV+ + E+ K
Sbjct: 92 TAIVDELKSKNQELLLGKKKEEEELVKMENKYVELAEK 129
>At1g76720.1 68414.m08929 eukaryotic translation initiation factor 2
family protein / eIF-2 family protein similar to
SP|O60841 Translation initiation factor IF-2 {Homo
sapiens}; contains Pfam profiles PF00009: Elongation
factor Tu GTP binding domain, PF03144: Elongation factor
Tu domain 2
Length = 1201
Score = 42.3 bits (95), Expect = 0.001
Identities = 32/144 (22%), Positives = 74/144 (51%), Gaps = 8/144 (5%)
Query: 32 TNLSKSERKAMEAYRFDSSALERAASA-AKELERSRHAKDALELSKLQESTRQQEQMAK- 89
T +K ++K E + +A +S AKE ++ + L+ K + E+
Sbjct: 305 TAAAKKKKKKKEKDKEKKAAAAATSSVEAKEEKQEESVTEPLQPKKKDAKGKAAEKKIPK 364
Query: 90 -IKEYEAAI---EQAKVEQKKVDYEERRKTLQEETKQHQMRAQYQD--QLAKKRYEEQLV 143
++E + A+ ++A+ +KK + E+ RK +E +Q ++ AQ ++ + K++ +E+L+
Sbjct: 365 HVREMQEALARRQEAEERKKKEEEEKLRKEEEERRRQEELEAQAEEAKRKRKEKEKEKLL 424
Query: 144 QQQKSQEEILRKQEESVAKQEALR 167
+++ + + KQ+ K+EA +
Sbjct: 425 RKKLEGKLLTAKQKTEAQKREAFK 448
Score = 40.7 bits (91), Expect = 0.003
Identities = 34/130 (26%), Positives = 67/130 (51%), Gaps = 10/130 (7%)
Query: 53 ERAASAAKELERSRHAKDALELSKLQESTRQQEQMAKIKEYEAAIEQAKVEQKKVDYEER 112
E +AA + ++ + KD E +T E AK ++ E ++ + +KK + +
Sbjct: 301 ETVETAAAKKKKKKKEKDK-EKKAAAAATSSVE--AKEEKQEESVTEPLQPKKK---DAK 354
Query: 113 RKTLQEETKQHQMRAQYQDQLAKKRYEEQLVQQQKSQEEILRKQEESVAKQEALRRATIE 172
K +++ +H + Q+ LA+++ E+ +++K +EE LRK+EE +QE L E
Sbjct: 355 GKAAEKKIPKHVR--EMQEALARRQEAEE--RKKKEEEEKLRKEEEERRRQEELEAQAEE 410
Query: 173 HEMELREKNK 182
+ + +EK K
Sbjct: 411 AKRKRKEKEK 420
Score = 37.5 bits (83), Expect = 0.027
Identities = 40/158 (25%), Positives = 68/158 (43%), Gaps = 14/158 (8%)
Query: 26 GVAAPSTNLSKSERKAMEAYRFDSSALERAASAAKELERSRHAKDALELSKLQESTRQQE 85
G AP N + E + +A + KE ++ + A A S + +Q+E
Sbjct: 285 GPVAPVENAGEKEGEKETV----ETAAAKKKKKKKEKDKEKKAAAAATSSVEAKEEKQEE 340
Query: 86 QMAKIKEYEAAIEQAKVEQKKVDYEERRKTLQEETKQHQMRAQYQDQLAKKRYEEQLVQQ 145
+ + + + + K +KK+ R E ++ R Q ++ KK EE+L
Sbjct: 341 SVTEPLQPKKKDAKGKAAEKKIPKHVR------EMQEALARRQEAEERKKKEEEEKL--- 391
Query: 146 QKSQEEILRKQEESVAKQEALRRATIEHEMELREKNKL 183
+K +EE R+QEE A+ E +R E E E + KL
Sbjct: 392 RKEEEER-RRQEELEAQAEEAKRKRKEKEKEKLLRKKL 428
Score = 33.5 bits (73), Expect = 0.43
Identities = 30/130 (23%), Positives = 61/130 (46%), Gaps = 8/130 (6%)
Query: 61 ELERSRHAKDALELSKL-QESTRQQEQMAKIKEYEAA--IEQAKVEQKKVDYEERRKTLQ 117
E+ S K ++ L+ L +S + AK + ++ IE K+++KK + + +TL+
Sbjct: 190 EITFSGKKKGSIVLASLGDDSVADETSQAKTPDTKSVEVIETGKIKKKKKNKNKVARTLE 249
Query: 118 EETKQHQMRAQYQDQLAKKR-----YEEQLVQQQKSQEEILRKQEESVAKQEALRRATIE 172
EE ++ A+ + A +R E + VQ Q + E ++E + A +
Sbjct: 250 EEDDLDKLLAELGETPAAERPASSTPEVEKVQAQPGPVAPVENAGEKEGEKETVETAAAK 309
Query: 173 HEMELREKNK 182
+ + +EK+K
Sbjct: 310 KKKKKKEKDK 319
>At5g49840.1 68418.m06172 ATP-dependent Clp protease ATP-binding
subunit ClpX, putative similar to CLP protease
regulatory subunit CLPX GI:2674203 from [Arabidopsis
thaliana]; non-consensus splice donor GC at exon 4;
non-consensus splice donor AA at exon 7
Length = 606
Score = 41.5 bits (93), Expect = 0.002
Identities = 27/90 (30%), Positives = 48/90 (53%), Gaps = 8/90 (8%)
Query: 347 NLLMYGPPGTGKTLFSKKLAKHSGMDYAIMTGGDVAP---MGKDAVAAIHKVF--DWANT 401
N+L+ GP G+GKTL +K LA+ + +AI + +G+D + ++K++ N
Sbjct: 264 NVLLLGPTGSGKTLLAKTLARIVNVPFAIADATSLTQAGYVGEDVESILYKLYVVSGCNV 323
Query: 402 --SRKGVLVFIDEADAFLRKRSSEKISEDL 429
+++G+ V+IDE D K S D+
Sbjct: 324 EEAQRGI-VYIDEVDKMTMKSHSSNGGRDV 352
>At5g44180.1 68418.m05406 homeobox transcription factor, putative
similar to homeobox transcription factor Hox7/homeotic
protein Hox7 (GI:19486) {Lycopersicon peruvianum};
similar to GP|4165087| Williams-Beuren syndrome deletion
transcript 9 [Homo sapiens]; contains Pfam PF02791: DDT
domain and Pfam PF00046: Homeobox domain
Length = 1694
Score = 41.5 bits (93), Expect = 0.002
Identities = 34/163 (20%), Positives = 76/163 (46%), Gaps = 10/163 (6%)
Query: 30 PSTNLSKSERKAMEAY-----RFDSSALERAASAAKELERSRHAKDALELSKLQESTRQQ 84
P+ NL+ + K Y +DS + A ++ K E+ E
Sbjct: 263 PNLNLATHQGKPGHVYSPNLVEYDSPYQKSYMDTAAQVHDDPFVKSEREVGNEDEDDDAL 322
Query: 85 EQMAKIKEYEAAI-EQAKVEQKKVDYEERRKTLQEETKQHQMRAQYQDQLAKKRYEEQLV 143
+ K EA I + + +K++ E ++ + ++ Q+R + + Q ++R EE+ +
Sbjct: 323 QLERHRKNEEARIAREVEAHEKRIRRELEKQDMLRRKREEQIRKEMERQDRERRKEEERL 382
Query: 144 --QQQKSQEEILRKQEESVAKQEA-LRRATIEHEMELREKNKL 183
++Q+ +E L++Q + ++E L++ TI E ++R+K ++
Sbjct: 383 LREKQREEERYLKEQMRELQRREKFLKKETIRAE-KMRQKEEM 424
Score = 39.9 bits (89), Expect = 0.005
Identities = 37/146 (25%), Positives = 73/146 (50%), Gaps = 12/146 (8%)
Query: 43 EAYRFDSSALERAASAAKELERSRHAKDALELSKLQESTRQQEQMAKIKEYEAAIEQAKV 102
+A + + A A+E+E + + EL K R++E+ + KE E + +
Sbjct: 320 DALQLERHRKNEEARIAREVE-AHEKRIRRELEKQDMLRRKREEQIR-KEMERQDRERRK 377
Query: 103 EQKKVDYEERRKTLQEETKQHQMRA-QYQDQLAKKRYEEQLVQQQKSQEEILRKQEE--- 158
E++++ E++R+ +E + QMR Q +++ KK E + ++ Q+E +RK++E
Sbjct: 378 EEERLLREKQRE--EERYLKEQMRELQRREKFLKK---ETIRAEKMRQKEEMRKEKEVAR 432
Query: 159 -SVAKQEALRRATIEHEMELREKNKL 183
A + A+ R + MEL E +L
Sbjct: 433 LKAANERAIARKIAKESMELIEDERL 458
>At3g50370.1 68416.m05508 expressed protein
Length = 2179
Score = 40.7 bits (91), Expect = 0.003
Identities = 31/112 (27%), Positives = 58/112 (51%), Gaps = 11/112 (9%)
Query: 73 ELSKLQESTRQQEQMAKIKEYEAAIEQAKVEQKKVDYEERRKTLQEETKQHQMRAQYQDQ 132
EL ++Q+ +++E+ I+E E IE A+ E EE R L E + Q R + + +
Sbjct: 472 ELERVQKM-QEEERRRIIEEQERVIELARTE------EEERLRLAREQDERQRRLEEEAR 524
Query: 133 LAKKRYEEQLVQQQKSQEEILRKQEES----VAKQEALRRATIEHEMELREK 180
A R E++ ++ + EE+ + +EE ++E ++A + +EL EK
Sbjct: 525 EAAFRNEQERLEATRRAEELRKSKEEEKHRLFMEEERRKQAAKQKLLELEEK 576
Score = 39.1 bits (87), Expect = 0.009
Identities = 30/112 (26%), Positives = 66/112 (58%), Gaps = 11/112 (9%)
Query: 76 KLQESTRQQEQMAKIKE-YEAAIEQAKVEQKKVDYEERRKTLQEETKQHQM-RAQYQD-- 131
K +E+ +Q E ++E +EA +E+ + K+ EERR+ ++E+ + ++ R + ++
Sbjct: 451 KKKEALKQTEFHDPVRESFEAELERVQ----KMQEEERRRIIEEQERVIELARTEEEERL 506
Query: 132 QLAKKRYEEQLVQQQKSQEEILRKQEESVAKQEALRRATIEHEMELREKNKL 183
+LA+++ E Q +++++E R ++E + EA RRA + + EK++L
Sbjct: 507 RLAREQDERQRRLEEEAREAAFRNEQE---RLEATRRAEELRKSKEEEKHRL 555
>At1g80790.1 68414.m09479 XH/XS domain-containing protein / XS zinc
finger domain-containing protein contains Pfam domains
PF03469: XH domain, PF03468: XS domain and PF03470: XS
zinc finger domain
Length = 634
Score = 40.7 bits (91), Expect = 0.003
Identities = 34/137 (24%), Positives = 64/137 (46%), Gaps = 9/137 (6%)
Query: 51 ALERAASAAKELER--SRHAKDALELS--KLQESTRQQEQMAKIKEYEAAIEQAKVEQKK 106
+L R EL+R + K ELS K+ R++E++ E EA + K+ K+
Sbjct: 283 SLRRVLIEKDELDRVYKQETKKMQELSREKINRIFREKERLTN--ELEAKMNNLKIWSKQ 340
Query: 107 VDYEERRKTLQEETKQHQMRAQYQDQLAKKRYEEQLVQQQKSQEEILRKQEESVAKQEAL 166
+D +++ L E +Q + + + + ++Q+K+ + +LR +E K+E
Sbjct: 341 LD---KKQALTELERQKLDEDKKKSDVMNSSLQLASLEQKKTDDRVLRLVDEHKRKKEET 397
Query: 167 RRATIEHEMELREKNKL 183
++ E EL K KL
Sbjct: 398 LNKILQLEKELDSKQKL 414
>At1g79280.1 68414.m09242 expressed protein weak similarity to
Nucleoprotein TPR (Swiss-Prot:P12270) [Homo sapiens]
Length = 2111
Score = 40.7 bits (91), Expect = 0.003
Identities = 27/121 (22%), Positives = 64/121 (52%), Gaps = 3/121 (2%)
Query: 62 LERSRHAKDALELSKLQESTRQQEQMAKIKEYEAAIEQAKVEQKKVDYEERRKTLQEETK 121
+ + ++ K+ ELSK +S +Q + AK + + A VEQ + EE+ K +Q K
Sbjct: 1466 MTKRKYEKEKDELSKQNQSLAKQLEEAKEEAGKRTTTDAVVEQSVKEREEKEKRIQILDK 1525
Query: 122 Q-HQMRAQYQDQLAK-KRYEEQLVQQQKSQEEILRKQEESVAKQEALRRATIEHEMELRE 179
HQ++ + + + K+ +E+L +++ ++ + ++ +S+ K + + ++ E+ E
Sbjct: 1526 YVHQLKDEVRKKTEDLKKKDEELTKERSERKSVEKEVGDSLTKIKK-EKTKVDEELAKLE 1584
Query: 180 K 180
+
Sbjct: 1585 R 1585
Score = 39.5 bits (88), Expect = 0.007
Identities = 30/144 (20%), Positives = 70/144 (48%), Gaps = 7/144 (4%)
Query: 33 NLSKSERKAMEAYRFDSSALERAASAAKELERSRHAKDALELSKLQESTRQQEQMAKIKE 92
+LS+ E++ +A + ++ +ELE+++ L ++K + + E + +
Sbjct: 1425 DLSEREKRLDDAQQAQATMQSEFNKQKQELEKNKKIHYTLNMTKRKYEKEKDELSKQNQS 1484
Query: 93 YEAAIEQAKVEQ-KKVDYEERRKTLQEETKQHQMRAQYQDQLAKKRYEEQLVQQQKSQEE 151
+E+AK E K+ + + +E ++ + R Q D +Y QL + + + E
Sbjct: 1485 LAKQLEEAKEEAGKRTTTDAVVEQSVKEREEKEKRIQILD-----KYVHQLKDEVRKKTE 1539
Query: 152 ILRKQEESVAKQEALRRATIEHEM 175
L+K++E + K+ + R ++E E+
Sbjct: 1540 DLKKKDEELTKERS-ERKSVEKEV 1562
>At2g45460.1 68415.m05654 forkhead-associated domain-containing
protein / FHA domain-containing protein
Length = 915
Score = 40.3 bits (90), Expect = 0.004
Identities = 23/93 (24%), Positives = 51/93 (54%), Gaps = 6/93 (6%)
Query: 84 QEQMAKIKEYEAAIEQAKVEQKKVDYEERRKTLQEETKQHQMRAQYQDQLAKKRYEEQLV 143
Q Q A I E + +++ + +++ E R+T E K R Q + Q KR+ + +
Sbjct: 349 QSQKASIAELKTGLDEERNQRR-----EERETAIAELKAAIHRCQIEAQEELKRFSDAAM 403
Query: 144 QQQKSQEEILRKQEESVAKQEALRRATIEHEME 176
+ ++ Q+E++ K +ES K+++++ T+ ++E
Sbjct: 404 RHEREQQEVINKMKES-EKEKSMQVETLMSKLE 435
>At1g79830.1 68414.m09326 expressed protein weak similarity to TATA
element modulatory factor (TMF) (Swiss-Prot:P82094)
[Homo sapiens]
Length = 927
Score = 40.3 bits (90), Expect = 0.004
Identities = 33/139 (23%), Positives = 67/139 (48%), Gaps = 9/139 (6%)
Query: 52 LERAASAAKELERSRHAKDALELSKLQESTRQQEQMAKIKEYEAAIEQAKVEQKKVDYEE 111
+ + + +EL + + A++A ++ KL+ R+ E+ K + E+ KVE K D
Sbjct: 445 INQVMAEGEELSKKQAAQEA-QIRKLRAQIREAEEEKKGLITKLQSEENKVESIKRDKTA 503
Query: 112 RRKTLQEETKQHQ-----MRAQYQDQLAKKRYEEQLVQQQKSQE---EILRKQEESVAKQ 163
K LQE ++HQ + Y + LA + + L +++ + E E+ + +E+ ++
Sbjct: 504 TEKLLQETIEKHQAELTSQKDYYSNALAAAKEAQALAEERTNNEARSELENRLKEAGERE 563
Query: 164 EALRRATIEHEMELREKNK 182
L +A E L +K +
Sbjct: 564 SMLVQALEELRQTLSKKEQ 582
Score = 34.7 bits (76), Expect = 0.19
Identities = 37/158 (23%), Positives = 74/158 (46%), Gaps = 13/158 (8%)
Query: 28 AAPSTNLSKSERKAMEAYRFDSSALERAASAAKELERSRHAKDALELSKLQESTRQQEQM 87
++ +TN+S S +E + ++ +A + R AK A E++KL Q + +
Sbjct: 326 SSSATNVSDSADVILELEK-TKKEIKMLENALQGAARQAQAK-ADEIAKLMHENEQLKSV 383
Query: 88 AKIKEYEAAIEQAKVEQKKVDYEERRKTLQEE----TKQHQMRAQYQ----DQLAKKRYE 139
+ + + +A+VE + +Y +R TL+ + TK+ + Q D A + +
Sbjct: 384 TE--DLKRKSNEAEVESLREEYHQRVATLERKVYALTKERDTLRREQNKKSDAAALLKEK 441
Query: 140 EQLVQQQKSQ-EEILRKQEESVAKQEALRRATIEHEME 176
++++ Q ++ EE+ +KQ A+ LR E E E
Sbjct: 442 DEIINQVMAEGEELSKKQAAQEAQIRKLRAQIREAEEE 479
Score = 33.9 bits (74), Expect = 0.33
Identities = 33/147 (22%), Positives = 61/147 (41%), Gaps = 12/147 (8%)
Query: 28 AAPSTNLSKSERKAMEAYRFDSSALERAASAAKELERSRHAKDALELSKLQESTRQQEQM 87
AA + K + EA + + S ++E + K A E + + Q ++
Sbjct: 460 AAQEAQIRKLRAQIREAEEEKKGLITKLQSEENKVESIKRDKTATEKLLQETIEKHQAEL 519
Query: 88 AKIKEYEA-AIEQAKVEQKKVDYEERRKTLQEETKQHQMRAQYQDQLAKK-RYEEQLVQQ 145
K+Y + A+ AK Q L EE ++ R++ +++L + E LVQ
Sbjct: 520 TSQKDYYSNALAAAKEAQ----------ALAEERTNNEARSELENRLKEAGERESMLVQA 569
Query: 146 QKSQEEILRKQEESVAKQEALRRATIE 172
+ + L K+E+ +E + R IE
Sbjct: 570 LEELRQTLSKKEQQAVYREDMFRGEIE 596
Score = 33.1 bits (72), Expect = 0.57
Identities = 24/116 (20%), Positives = 58/116 (50%), Gaps = 6/116 (5%)
Query: 62 LERSRHAKDALELSKLQESTRQQEQMAKIKEYEAAIEQAKVEQKKVDYEERRKTLQEETK 121
LER +A + +E ++ + A +KE + I Q E +++ +K +E +
Sbjct: 410 LERKVYALTKERDTLRREQNKKSDAAALLKEKDEIINQVMAEGEELS----KKQAAQEAQ 465
Query: 122 QHQMRAQYQDQLAKKRYEEQLVQQQKSQEEILRKQEESVAKQEALRRATIEHEMEL 177
++RAQ ++ +K+ +Q ++++ E +++ + A ++ L+ +H+ EL
Sbjct: 466 IRKLRAQIREAEEEKKGLITKLQSEENKVESIKR--DKTATEKLLQETIEKHQAEL 519
Score = 30.3 bits (65), Expect = 4.0
Identities = 35/156 (22%), Positives = 70/156 (44%), Gaps = 17/156 (10%)
Query: 31 STNLSKSERKAMEAYRFDSSALERAASAAK-----ELERSRHAKDALELSKLQESTRQQE 85
++ L ++E KA A + S ER + E + S + +LSK E RQ+
Sbjct: 649 NSRLQEAESKAATAEERERSVNERLSQTLSRINVLEAQLSCLRAEQGQLSKSLEKERQRA 708
Query: 86 QMAKIKEYEAAIEQAKVEQKKVDYEERRKTLQEETKQHQMRAQYQDQLAKKRYEEQLVQQ 145
+ +EY AA E+A E R L+ E + ++R +++ +L + +L+Q+
Sbjct: 709 AENR-QEYLAAKEEADT------LEGRANQLEVEIR--ELRRKHKQELQEVLLHNELIQK 759
Query: 146 QKSQEEILRKQEESVAKQEALRRATIEHEMELREKN 181
+E+ R E A+ + + + ++ + +N
Sbjct: 760 DLEREKASRLDLERTAR---INSSAVSEQLPIARQN 792
>At1g21160.1 68414.m02646 eukaryotic translation initiation factor 2
family protein / eIF-2 family protein similar to
SP|O60841 Translation initiation factor IF-2 {Homo
sapiens}; contains Pfam profiles PF00009: Elongation
factor Tu GTP binding domain, PF03144: Elongation factor
Tu domain 2
Length = 1088
Score = 40.3 bits (90), Expect = 0.004
Identities = 36/141 (25%), Positives = 73/141 (51%), Gaps = 15/141 (10%)
Query: 35 SKSERKAMEAYRFDSSALERAASAAKE-LERSRHAKDALELSKLQESTRQ-QEQMAKIKE 92
+K ++K + + S++L ++ AKE + + K + K+ + R+ QE +A+ KE
Sbjct: 175 AKKKKKKKDKDKKASASLAISSVEAKEDRQGKKDVKIKVAEKKVPKHVREKQETLARWKE 234
Query: 93 YEAAIEQAKVEQKKVDYEERRKTLQEETKQHQMRAQYQDQLAKKRYEEQLVQQQKSQEEI 152
E + KK + EER + +EE + + R + +++ +KR ++ + +K QE +
Sbjct: 235 AE--------DGKKKEEEERLRKEEEERRIEEEREREAEEIRQKR---KIRKMEKKQEGL 283
Query: 153 L--RKQEESVAKQEALRRATI 171
+ KQ+ AK EA R+ +
Sbjct: 284 ILTAKQKRDAAKNEAFRKRVL 304
Score = 30.3 bits (65), Expect = 4.0
Identities = 23/118 (19%), Positives = 53/118 (44%), Gaps = 3/118 (2%)
Query: 63 ERSRHAKDALELSKLQESTRQQEQMAKIKEYEAAIEQAKVEQKKVDYEERRKTLQEETKQ 122
E++ + A + K ++ ++ I EA ++ + K+ E++ KQ
Sbjct: 167 EKTVESATAKKKKKKKDKDKKASASLAISSVEAKEDRQGKKDVKIKVAEKKVPKHVREKQ 226
Query: 123 HQMRAQYQDQLAKKRYEEQLVQQQKSQEEILRKQEESVAKQEALRRATIEHEMELREK 180
+ + + KK+ EE ++ + +EE R +EE + E +R+ +ME +++
Sbjct: 227 ETLARWKEAEDGKKKEEE---ERLRKEEEERRIEEEREREAEEIRQKRKIRKMEKKQE 281
>At5g57120.1 68418.m07132 expressed protein weak similarity to
SP|Q14978 Nucleolar phosphoprotein p130 {Homo sapiens}
Length = 330
Score = 39.9 bits (89), Expect = 0.005
Identities = 32/138 (23%), Positives = 65/138 (47%), Gaps = 7/138 (5%)
Query: 48 DSSALERAASAAKELERSRHAKDALELSKLQESTRQQEQMAKIKEYEAAIEQAKVEQKKV 107
D A + A +E + K + K +E+ + + K+KE +A IE E+KK
Sbjct: 68 DHEAAANGNTEANVVEAVENVKKDKKKKKNKETKVEVTEEEKVKETDAVIEDGVKEKKK- 126
Query: 108 DYEERRKTLQEETKQHQMRAQYQD---QLAKKRYEEQLVQQQKSQEEILRKQEESVAKQE 164
+E + + EE K + A +D + KK+ + + V+ +E++ +K++ S + E
Sbjct: 127 -KKETKVKVTEEEKVKETDAVIEDGVKEKKKKKSKSKSVEADDDKEKVSKKRKRS--EPE 183
Query: 165 ALRRATIEHEMELREKNK 182
+ T + + E + + K
Sbjct: 184 ETKEETEDDDEESKRRKK 201
Score = 32.3 bits (70), Expect = 1.0
Identities = 25/107 (23%), Positives = 53/107 (49%), Gaps = 5/107 (4%)
Query: 73 ELSKLQESTRQQEQMAKIKEYEAAIEQAKVEQKKVDYEERRKTLQEETKQHQMRAQYQDQ 132
E K +E+ + + K+KE +A IE E+KK + + K+++ + + ++ + +
Sbjct: 123 EKKKKKETKVKVTEEEKVKETDAVIEDGVKEKKK--KKSKSKSVEADDDKEKVSKKRKRS 180
Query: 133 LAKKRYEEQLVQQQKSQEEILRKQEESVAKQEALRRATIEHEMELRE 179
++ EE + +E RK+EE+V + + + T E E +E
Sbjct: 181 EPEETKEE---TEDDDEESKRRKKEENVVENDEGVQETPVKETETKE 224
>At4g24710.1 68417.m03536 AAA-type ATPase family protein similar to
HPV16 E1 protein binding protein [Homo sapiens]
gi|2232019|gb|AAB64095; contains Pfam domain, PF00004:
ATPase, AAA family ('A'TPases 'A'ssociated with diverse
cellular 'A'ctivities)
Length = 467
Score = 39.9 bits (89), Expect = 0.005
Identities = 42/168 (25%), Positives = 69/168 (41%), Gaps = 21/168 (12%)
Query: 346 RNLLMYGPPGTGKTLFSKKLAK------HSGMDYAIMTGGDV--------APMGKDAVAA 391
R +L++GPPGTGKT K LA+ +S + + + + GK
Sbjct: 203 RIILLHGPPGTGKTSLCKALAQKLSIRCNSRYPHCQLIEVNAHSLFSKWFSESGKLVAKL 262
Query: 392 IHKVFDWANTSRKGVLVFIDEADAFLRKR----SSEKISEDLRAALNAFLYRTSDQSS-- 445
K+ + V V IDE ++ R S + S+ +R +NA L + S
Sbjct: 263 FQKIQEMVEEDGNLVFVLIDEVESLAAARKAALSGSEPSDSIR-VVNALLTQMDKLKSAP 321
Query: 446 RIMLVLASNTPQQFDSAINDRLDKMIEFGLPALEERERLIRLYFDKFV 493
++++ SN D A DR D G P L R ++R ++ +
Sbjct: 322 NVIILTTSNITTAIDVAFVDRADIKAYVGPPTLHVRYEILRSCVEELI 369
>At1g13120.1 68414.m01521 expressed protein contains Prosite
PS00012: Phosphopantetheine attachment site; similar to
GLE1 (GI:3288817) {Homo sapiens}; EST gb|N37870 comes
from this gene
Length = 611
Score = 39.9 bits (89), Expect = 0.005
Identities = 29/121 (23%), Positives = 61/121 (50%), Gaps = 9/121 (7%)
Query: 66 RHAKDALELSKLQESTRQQEQMAKIKEYEAAIEQAKVEQKKVDYEERRKTLQEETKQHQM 125
R+ +E + E +A++++Y E K ++K+D + +RK + E H
Sbjct: 149 RNQVSVVETEIMNEIETSLSAIARVEKYS---ETRKEVERKLDLQYQRK-VAEALDTHLT 204
Query: 126 RAQYQDQLAKKRYEEQLVQQQKSQEEILRK----QEESVAKQEALRRATIEHEMELREKN 181
Q + ++ K + EE+ ++ +++QEE RK QEE + +++A A + ++ E+
Sbjct: 205 AVQREHKI-KSQIEERKIRSEEAQEEARRKERAHQEEKIRQEKARAEAQMLAKIRAEEEK 263
Query: 182 K 182
K
Sbjct: 264 K 264
Score = 33.1 bits (72), Expect = 0.57
Identities = 29/126 (23%), Positives = 60/126 (47%), Gaps = 9/126 (7%)
Query: 38 ERKAMEAYRFDSSALERAASAAKELE-RSRHAKDALELSKLQESTRQQEQMAKIKEYEAA 96
+RK EA +A++R ++E R +++A E ++ +E Q+E KI++ +A
Sbjct: 192 QRKVAEALDTHLTAVQREHKIKSQIEERKIRSEEAQEEARRKERAHQEE---KIRQEKAR 248
Query: 97 IEQAKVEQKKVDYEERRKTLQEETKQHQMRAQYQDQLAKKRYEEQLVQQQKSQEEILRKQ 156
E + K+ EE +K ++ + + + D +K E++L +Q+ E +
Sbjct: 249 AEAQML--AKIRAEEEKKEVERKAAREVAEKEVAD---RKAAEQKLAEQKAVIESVTGSS 303
Query: 157 EESVAK 162
S A+
Sbjct: 304 ATSNAQ 309
>At5g66620.1 68418.m08397 LIM domain-containing protein contains
Pfam profile PF00412: LIM domain
Length = 644
Score = 39.5 bits (88), Expect = 0.007
Identities = 29/139 (20%), Positives = 67/139 (48%), Gaps = 7/139 (5%)
Query: 25 VGVAAPSTNLSKSERKAMEAYRFDSSALERAASAAKELERSRHAKDALELSKLQESTRQQ 84
+ V+ ++ K++++++ + ++ L+ A A++L+ + E + + TR+
Sbjct: 34 IEVSQHEADIQKAKQRSLATH--EAEKLDLATHEAEQLDLAIQEFSRQEEEEERRRTREL 91
Query: 85 EQMAKIKEYEAAIEQAKVEQKKVDYEERR-----KTLQEETKQHQMRAQYQDQLAKKRYE 139
E A+I E+ ++ KK E+ +TL+E K++ R +++Q+ K
Sbjct: 92 ENDAQIANVLQHEERERLINKKTALEDEEDELLARTLEESLKENNRRKMFEEQVNKDEQL 151
Query: 140 EQLVQQQKSQEEILRKQEE 158
+VQ+ + EE + EE
Sbjct: 152 ALIVQESLNMEEYPIRLEE 170
Score = 31.5 bits (68), Expect = 1.8
Identities = 19/70 (27%), Positives = 38/70 (54%), Gaps = 4/70 (5%)
Query: 77 LQESTRQQEQMAKIKEYEAAIEQAKVEQKKVDYEERRKTLQEETKQHQMRAQYQDQLAKK 136
+QES +E +++EY++ +A ++ VD E+ K ++E K Q++D+ KK
Sbjct: 155 VQESLNMEEYPIRLEEYKSISRRAPLD---VD-EQFAKAVKESLKNKGKGKQFEDEQVKK 210
Query: 137 RYEEQLVQQQ 146
+ L+ Q+
Sbjct: 211 DEQLALIVQE 220
>At4g36700.1 68417.m05208 cupin family protein low similarity to
preproMP27-MP32 from Cucurbita cv. Kurokawa Amakuri
[GI:691752]; contains Pfam profile PF00190: Cupin
Length = 522
Score = 39.5 bits (88), Expect = 0.007
Identities = 23/74 (31%), Positives = 43/74 (58%), Gaps = 4/74 (5%)
Query: 94 EAAIEQAKVEQKKVDYEERRKTLQEETKQHQMRAQYQDQLAKKRYEEQLVQ----QQKSQ 149
E IE+ KVE ++ ++ RK +E K+ + A+ +++ +KR EE+ + QQ Q
Sbjct: 440 EGEIEKLKVEIERKKIDDERKRRHDERKKEEEEAKREEEERRKREEEEEKKRWPPQQPPQ 499
Query: 150 EEILRKQEESVAKQ 163
EE LR+++ + K+
Sbjct: 500 EEELRERQLPMEKE 513
Score = 33.5 bits (73), Expect = 0.43
Identities = 30/120 (25%), Positives = 58/120 (48%), Gaps = 5/120 (4%)
Query: 57 SAAKELERSRHAKDALELSKLQESTRQQEQMAKIKEYEAAIEQAKVEQKKVDYEERRKTL 116
SA + L+R A S + ++ A I E + E ++E+ KV+ E RK +
Sbjct: 399 SALRMLDRQVLAASLNVSSVTIDGLLGAQKEAVILECHSCAE-GEIEKLKVEIE--RKKI 455
Query: 117 QEETKQHQMRAQYQDQLAKKRYEEQLVQQQKSQEEILRKQEESVAKQEALRRATIEHEME 176
+E K+ + +++ AK+ EE+ ++++ +EE R + ++E LR + E E
Sbjct: 456 DDERKRRHDERKKEEEEAKREEEER--RKREEEEEKKRWPPQQPPQEEELRERQLPMEKE 513
>At2g22610.1 68415.m02680 kinesin motor protein-related
Length = 1093
Score = 39.5 bits (88), Expect = 0.007
Identities = 39/161 (24%), Positives = 71/161 (44%), Gaps = 15/161 (9%)
Query: 33 NLSKSERKAMEAYRFDSSALERAASAAKELERSRHAKDALELSKLQESTRQQEQMA---- 88
NL + +YR S E+ +L+ S H + + ++LQE + ++++
Sbjct: 793 NLEGKNKGRDNSYR---SLQEKNKDLQNQLD-SVHNQSEKQYAQLQERLKSRDEICSNLQ 848
Query: 89 -KIKEYEAAIEQ------AKVEQKKVDYEERRKTLQEETKQHQMRAQYQDQLAKKRYEEQ 141
K+KE E + + A QK D E K + + Q + + + K+
Sbjct: 849 QKVKELECKLRERHQSDSAANNQKVKDLENNLKESEGSSLVWQQKVKDYENKLKESEGNS 908
Query: 142 LVQQQKSQEEILRKQEESVAKQEALRRATIEHEMELREKNK 182
LV QQK +E ++ ++E + LR+ E EM L+E+ K
Sbjct: 909 LVWQQKIKELEIKHKDEQSQEAVLLRQKIKELEMRLKEQEK 949
Score = 30.3 bits (65), Expect = 4.0
Identities = 14/47 (29%), Positives = 25/47 (53%)
Query: 136 KRYEEQLVQQQKSQEEILRKQEESVAKQEALRRATIEHEMELREKNK 182
K E+ Q+ +S++E ++K EE++ E + L+EKNK
Sbjct: 767 KAMVEKARQESRSKDESIKKMEENIQNLEGKNKGRDNSYRSLQEKNK 813
>At4g36860.2 68417.m05227 LIM domain-containing protein low
similarity to LIM-domain protein [Branchiostoma
floridae] GI:3360516, DRAL/Slim3/FHL2 [Homo sapiens]
GI:7209525; contains Pfam profile PF00412: LIM domain
Length = 547
Score = 39.1 bits (87), Expect = 0.009
Identities = 30/109 (27%), Positives = 55/109 (50%), Gaps = 7/109 (6%)
Query: 71 ALELSKLQESTRQQEQMAKIKEYEAAIEQAKVEQKKVDYEERRKTLQEETKQHQMRAQYQ 130
AL LS+ + Q ++ KI EY++ E+ + + D E R L+ ++ + AQ Q
Sbjct: 52 ALSLSEQEHVIPQDDKGKKIIEYKSETEEDDDDDEDEDEEYMRAQLEAAEEEERRVAQAQ 111
Query: 131 -DQLAKKRYEEQLVQQQK------SQEEILRKQEESVAKQEALRRATIE 172
++ K+R E QL + +K +EE +R+ + + + E L +A E
Sbjct: 112 IEEEEKRRAEAQLEETEKLLAKARLEEEEMRRSKAQLEEDELLAKALQE 160
Score = 31.5 bits (68), Expect = 1.8
Identities = 24/95 (25%), Positives = 44/95 (46%), Gaps = 2/95 (2%)
Query: 90 IKEYEAAIEQAKVEQKKVDYEERRKTLQEETKQHQMRAQYQDQLAKKRYEEQLVQQQKSQ 149
+ E E I Q +K ++Y+ + ++ + + + QL EE+ V Q + +
Sbjct: 55 LSEQEHVIPQDDKGKKIIEYKSETEE-DDDDDEDEDEEYMRAQLEAAEEEERRVAQAQIE 113
Query: 150 EEILRKQEESVAKQE-ALRRATIEHEMELREKNKL 183
EE R+ E + + E L +A +E E R K +L
Sbjct: 114 EEEKRRAEAQLEETEKLLAKARLEEEEMRRSKAQL 148
>At1g66840.1 68414.m07597 expressed protein contains Pfam profile
PF05701: Plant protein of unknown function (DUF827);
expression supported by MPSS
Length = 607
Score = 39.1 bits (87), Expect = 0.009
Identities = 30/135 (22%), Positives = 62/135 (45%), Gaps = 7/135 (5%)
Query: 35 SKSERKAMEAYRFDSSALERAASAAKELERSRHAKDALELSKLQESTRQQEQMAKIKEYE 94
SK+ + D LE KE+ER +++ SK + R ++ ++ +KE
Sbjct: 219 SKNFENELAETLLDIEMLETQLKLVKEMERKVQRNESMSRSKNRAFERGKDNLSVLKEVT 278
Query: 95 AAIEQAKVEQKKVDYE-----ERRKTLQEETKQHQMRAQYQDQLAKKRYEEQLVQQQKSQ 149
A E K E ++ E TL++E + + D++ +K ++ ++++ ++
Sbjct: 279 EATEAKKAELASINAELFCLVNTMDTLRKEFDHAKKETAWLDKMIQK--DDVMLERLNTK 336
Query: 150 EEILRKQEESVAKQE 164
I + Q E+V+K E
Sbjct: 337 LLIAKDQLEAVSKAE 351
Score = 31.1 bits (67), Expect = 2.3
Identities = 28/127 (22%), Positives = 63/127 (49%), Gaps = 6/127 (4%)
Query: 47 FDSSALERAASAAKEL---ERSRHAKDALELSKLQESTRQQEQMAKIKEYEAAIEQAKVE 103
F+ +R A+ +EL E +R + ++ ++ +++E ++K+ E E A +
Sbjct: 365 FEKLKSDREAAKKEELKLREEARIINNEIQKTETGFDGKEKELLSKLDELEKAKHAESLA 424
Query: 104 QKKVDYEERRKTLQEETKQHQMRAQYQDQLAKKRYEEQLVQQQKSQEEILRKQEESVAKQ 163
+K++ KT+ ET++ + R +++ YE + ++E +K E ++A
Sbjct: 425 LEKLETMVE-KTM--ETREMESRRNSTITISRFEYEYLSGKACHAEETAEKKVEAAMAWV 481
Query: 164 EALRRAT 170
EAL+ +T
Sbjct: 482 EALKAST 488
>At5g23890.1 68418.m02806 expressed protein weak similarity to
SP|P12957 Caldesmon (CDM) {Gallus gallus}
Length = 946
Score = 38.7 bits (86), Expect = 0.012
Identities = 31/151 (20%), Positives = 73/151 (48%), Gaps = 5/151 (3%)
Query: 31 STNLSKSERKAMEAYRFDSSALERAASAAKELERSRHAKDALELSKLQESTRQQEQMAKI 90
++++ E +EA A+ + E+E+ +A ELS +E E+MA++
Sbjct: 632 ASDIVSEELARIEAESMAEKAVSAHNALVAEVEKDVNASFEKELSMEREKIEAVEKMAEL 691
Query: 91 KEYEAAIEQAKVEQKKVDYEERRKTLQEETK-QHQMRAQYQDQLAKKRYEEQLVQQQKSQ 149
+ E + K E++ + + R ++ E + ++R +++L + + +K +
Sbjct: 692 AKVELEQLREKREEENLALVKERAAVESEMEVLSRLRRDAEEKLEDLMSNKAEITFEKER 751
Query: 150 EEILRKQEESVAKQEALRRATIEHEMELREK 180
LRK+ A++E+ R + +++E+E+ K
Sbjct: 752 VFNLRKE----AEEESQRISKLQYELEVERK 778
>At3g57150.1 68416.m06363 dyskerin, putative / nucleolar protein
NAP57, putative similar to SP|P40615 Dyskerin (Nucleolar
protein NAP57) {Rattus norvegicus}; contains Pfam
profiles PF01509: TruB family pseudouridylate synthase
(N terminal domain), PF01472: PUA domain; supporting
cDNA gi|8901185|gb|AF234984.2|AF234984
Length = 565
Score = 38.7 bits (86), Expect = 0.012
Identities = 30/130 (23%), Positives = 65/130 (50%), Gaps = 3/130 (2%)
Query: 55 AASAAKELERSRHAKDALELSKLQ--ESTRQQEQMAKIKEYEAAIEQAKVEQKKVDYEER 112
AA+A +E++ +A E K + +S+ + K +E + E+K +++
Sbjct: 420 AAAAPEEIKADAENGEAGEARKRKHDDSSDSPAPVTTKKSKTKEVEGEEAEEKVKSSKKK 479
Query: 113 RKTLQEETKQHQMRAQYQDQLAKKRYEEQLVQQQKSQEEILRKQEESVAKQEALRRATIE 172
+K +EE K+ + ++ +++ KK +E+++++ S + +K+++S EA A E
Sbjct: 480 KKKDKEEEKEEEAGSEKKEKKKKKDKKEEVIEEVASPKSEKKKKKKS-KDTEAAVDAEDE 538
Query: 173 HEMELREKNK 182
E EK K
Sbjct: 539 SAAEKSEKKK 548
Score = 29.9 bits (64), Expect = 5.4
Identities = 22/123 (17%), Positives = 61/123 (49%), Gaps = 8/123 (6%)
Query: 64 RSRHAKDALELSKLQESTRQQEQMAKIKEYEAAIEQAKVEQKKVDYEERRKTL----QEE 119
R R D+ + + + + + + +E E ++ +K ++KK EE+ + +E+
Sbjct: 440 RKRKHDDSSDSPAPVTTKKSKTKEVEGEEAEEKVKSSKKKKKKDKEEEKEEEAGSEKKEK 499
Query: 120 TKQHQMRAQYQDQLAKKRYEEQLVQQQKSQEEILRKQEESVAKQEALRRATIEHEMELRE 179
K+ + + +++A + E++ ++ K E + ++ES A++ ++ + + ++
Sbjct: 500 KKKKDKKEEVIEEVASPKSEKKKKKKSKDTEAAVDAEDESAAEKSEKKK----KKKDKKK 555
Query: 180 KNK 182
KNK
Sbjct: 556 KNK 558
>At1g63300.1 68414.m07156 expressed protein similar to Intracellular
protein transport protein USO1 (Swiss-Prot:P25386)
[Saccharomyces cerevisiae]; similar to Myosin II heavy
chain, non muscle (Swiss-Prot:P08799) [Dictyostelium
discoideum]
Length = 1029
Score = 38.7 bits (86), Expect = 0.012
Identities = 40/177 (22%), Positives = 71/177 (40%), Gaps = 5/177 (2%)
Query: 69 KDALELSKLQESTRQQEQMAKIKEYEAAIEQAKVEQKKVDYEERR--KTLQEETKQHQMR 126
K E ++L+ RQ E+M K E QA+ E K + E+ KT Q E +
Sbjct: 647 KAMTEANELRMQKRQLEEMIKDANDELRANQAEYEAKLHELSEKLSFKTSQMERMLENLD 706
Query: 127 AQYQDQLAKKRYEEQLVQQQKSQEEILRKQEESVAKQEALRRATIEHEMELREKNKLXXX 186
+ + +KR+EE + + +IL+++ E++ K + E LR +
Sbjct: 707 EKSNEIDNQKRHEEDVTANLNQEIKILKEEIENLKKNQDSLMLQAEQAENLRVDLEKTKK 766
Query: 187 XXXXXXXXXXXXXNRDINLE---QIRLKAAENRVTILESIKTAGSVVGSGLNALVTD 240
+ I LE + K +E+ L+ IK A + ++ L T+
Sbjct: 767 SVMEAEASLQRENMKKIELESKISLMRKESESLAAELQVIKLAKDEKETAISLLQTE 823
>At1g13790.1 68414.m01619 XH/XS domain-containing protein / XS zinc
finger domain-containing protein contains Pfam domains
PF03469: XH domain, PF03468: XS domain and PF03470: XS
zinc finger domain
Length = 736
Score = 38.7 bits (86), Expect = 0.012
Identities = 30/114 (26%), Positives = 59/114 (51%), Gaps = 10/114 (8%)
Query: 75 SKLQESTRQQEQMAKIKEYEAAIEQAKVEQKKVD-YEERRKT---LQEETKQHQMRAQYQ 130
S L++ +++++M + +I Q YEE K L+ + K+++ R Y
Sbjct: 388 SVLEKRMKEKDEMINTHNEKMSIMQQTARDYLASIYEEHEKASQHLEAQRKEYEDRENYL 447
Query: 131 DQL-AKKRYEEQLVQQQKSQEEILRKQEESVAKQEALRRATIEHEMELREKNKL 183
D+ AK + E + +Q QK + ++ QE++ A ++ +R A E + REK++L
Sbjct: 448 DKCQAKNKTERRKLQWQK-HKNLMATQEQNKADEDMMRLA----EQQQREKDEL 496
Score = 31.1 bits (67), Expect = 2.3
Identities = 42/151 (27%), Positives = 75/151 (49%), Gaps = 19/151 (12%)
Query: 31 STNLSKSER-KAMEA-YRFDSSALERAASAAKELERSRHAKDALE-------LSKLQEST 81
+T ++KS+ + ME+ Y+ SS LE+ E+ + + K ++ L+ + E
Sbjct: 367 NTLVTKSDNLQQMESIYKQTSSVLEKRMKEKDEMINTHNEKMSIMQQTARDYLASIYEEH 426
Query: 82 RQQEQM--AKIKEYEAAIEQAKVEQKKVDYEERRKTLQEETKQHQMRAQYQDQLAKKRYE 139
+ Q A+ KEYE Q K + ERRK LQ + ++ M Q Q++ +
Sbjct: 427 EKASQHLEAQRKEYEDRENYLDKCQAK-NKTERRK-LQWQKHKNLMATQEQNKADEDMM- 483
Query: 140 EQLVQQQKSQEEILRKQ----EESVAKQEAL 166
+L +QQ+ +++ LRKQ EE + ++AL
Sbjct: 484 -RLAEQQQREKDELRKQVRELEEKIDAEQAL 513
>At1g13220.2 68414.m01534 nuclear matrix constituent protein-related
similar to nuclear matrix constituent protein 1 (NMCP1)
[Daucus carota] GI:2190187
Length = 1128
Score = 38.7 bits (86), Expect = 0.012
Identities = 31/124 (25%), Positives = 60/124 (48%)
Query: 59 AKELERSRHAKDALELSKLQESTRQQEQMAKIKEYEAAIEQAKVEQKKVDYEERRKTLQE 118
A+ +S K L+ + +ES QQE+++ KE E+ + +++ ++ E++ +E
Sbjct: 217 AEATRKSSELKLRLKEVETRESVLQQERLSFTKERESYEGTFQKQREYLNEWEKKLQGKE 276
Query: 119 ETKQHQMRAQYQDQLAKKRYEEQLVQQQKSQEEILRKQEESVAKQEALRRATIEHEMELR 178
E+ Q R Q + E++L ++K EE RK + S++K + + EL
Sbjct: 277 ESITEQKRNLNQREEKVNEIEKKLKLKEKELEEWNRKVDLSMSKSKETEEDITKRLEELT 336
Query: 179 EKNK 182
K K
Sbjct: 337 TKEK 340
Score = 30.7 bits (66), Expect = 3.1
Identities = 31/124 (25%), Positives = 60/124 (48%), Gaps = 7/124 (5%)
Query: 62 LERSRHAKDALELSKLQESTRQ-QEQMAKIKEYEAAIEQAKVEQKKVDYEERRKTLQEET 120
LE+ + D L LQ+ + + +M K KE E +E KK + EE + LQ E
Sbjct: 469 LEKQQLLSDKESLEDLQQEIEKIRAEMTK-KEEMIEEECKSLEIKKEEREEYLR-LQSEL 526
Query: 121 KQHQMRAQYQDQLAKKRYEEQLVQQQKSQEE-ILRKQEESVAKQEALRRATIEHEMELRE 179
K +++ ++ K E ++++ ++E + ++++V +E +R I E E E
Sbjct: 527 KSQIEKSRVHEEFLSKEVENLKQEKERFEKEWEILDEKQAVYNKERIR---ISEEKEKFE 583
Query: 180 KNKL 183
+ +L
Sbjct: 584 RFQL 587
Score = 29.5 bits (63), Expect = 7.1
Identities = 29/121 (23%), Positives = 63/121 (52%), Gaps = 8/121 (6%)
Query: 51 ALERAASAAKELERSRHAKDALEL--SKLQESTRQQEQMAKIKEYEAAIEQAKVEQKKVD 108
A E A + E + D E+ SK+ E + E++ K + E + ++E++KV+
Sbjct: 358 AFEEKLIAREGTEIQKLIDDQKEVLGSKMLEFELECEEIRKSLDKELQRKIEELERQKVE 417
Query: 109 YEERRKTLQEETKQHQMRAQYQDQLAKKRYE-EQLVQQQKSQEEILRKQEE--SVAKQEA 165
+ + L+ K++Q + D++ +K + E ++ K +E+I++ +E+ S+ KQ+
Sbjct: 418 IDHSEEKLE---KRNQAMNKKFDRVNEKEMDLEAKLKTIKEREKIIQAEEKRLSLEKQQL 474
Query: 166 L 166
L
Sbjct: 475 L 475
Score = 29.5 bits (63), Expect = 7.1
Identities = 22/114 (19%), Positives = 58/114 (50%), Gaps = 6/114 (5%)
Query: 60 KELERSRHAKDALELSKLQESTRQQEQMAK-IKEYEAAIEQAKVEQKKVDYEERRKTLQE 118
++LE+ A + + ++ E E K IKE E I+ E+K++ E+++ L +
Sbjct: 423 EKLEKRNQAMNK-KFDRVNEKEMDLEAKLKTIKEREKIIQ---AEEKRLSL-EKQQLLSD 477
Query: 119 ETKQHQMRAQYQDQLAKKRYEEQLVQQQKSQEEILRKQEESVAKQEALRRATIE 172
+ ++ + + A+ +E++++++ EI +++ E + ++ ++ IE
Sbjct: 478 KESLEDLQQEIEKIRAEMTKKEEMIEEECKSLEIKKEEREEYLRLQSELKSQIE 531
>At1g13220.1 68414.m01533 nuclear matrix constituent protein-related
similar to nuclear matrix constituent protein 1 (NMCP1)
[Daucus carota] GI:2190187
Length = 391
Score = 38.7 bits (86), Expect = 0.012
Identities = 31/124 (25%), Positives = 60/124 (48%)
Query: 59 AKELERSRHAKDALELSKLQESTRQQEQMAKIKEYEAAIEQAKVEQKKVDYEERRKTLQE 118
A+ +S K L+ + +ES QQE+++ KE E+ + +++ ++ E++ +E
Sbjct: 230 AEATRKSSELKLRLKEVETRESVLQQERLSFTKERESYEGTFQKQREYLNEWEKKLQGKE 289
Query: 119 ETKQHQMRAQYQDQLAKKRYEEQLVQQQKSQEEILRKQEESVAKQEALRRATIEHEMELR 178
E+ Q R Q + E++L ++K EE RK + S++K + + EL
Sbjct: 290 ESITEQKRNLNQREEKVNEIEKKLKLKEKELEEWNRKVDLSMSKSKETEEDITKRLEELT 349
Query: 179 EKNK 182
K K
Sbjct: 350 TKEK 353
>At1g01660.1 68414.m00084 U-box domain-containing protein
Length = 568
Score = 38.7 bits (86), Expect = 0.012
Identities = 24/109 (22%), Positives = 56/109 (51%), Gaps = 6/109 (5%)
Query: 52 LERAASAAKELERSRHAKDALELSK--LQESTRQQEQMAKIKEYEAAIEQAKVEQKKVDY 109
+E KE E K +E + +Q+ T EQ+ KE E ++++ + E +K
Sbjct: 322 VEAEEMLGKEKEEHERTKKEIEEVRAIVQDGTLYNEQLRHRKEMEESMKRQEEELEKTKK 381
Query: 110 EERRKTLQEETKQHQMRAQYQDQLAKKRYEEQLVQQQKSQEEILRKQEE 158
E+ + + + Y+D++ +++ E+LV++++ + E ++K++E
Sbjct: 382 EKEEACMISKN----LMQLYEDEVRQRKEAEELVKRRREELEKVKKEKE 426
Score = 36.3 bits (80), Expect = 0.062
Identities = 29/138 (21%), Positives = 64/138 (46%), Gaps = 13/138 (9%)
Query: 58 AAKELERSRHAKDALELSKLQESTRQQEQMAKIKEYEAAI-EQAKVEQKKVDYEERRKTL 116
A E+E S+ + + + E + +EYEA E+AK+ ++ + +++ +
Sbjct: 233 ALMEVEESKREAYEECVRRFKAENTAVEAIRSAREYEAMYNEEAKLRKEGKEALAKQRKM 292
Query: 117 QEETKQHQ---------MRAQYQDQLAKKRYEEQLVQQQKSQEEILRKQEE---SVAKQE 164
E+TKQ + R Y ++L ++ E+++ ++K + E +K+ E ++ +
Sbjct: 293 VEKTKQERDDALIIILNGRKLYNEELRRRVEAEEMLGKEKEEHERTKKEIEEVRAIVQDG 352
Query: 165 ALRRATIEHEMELREKNK 182
L + H E+ E K
Sbjct: 353 TLYNEQLRHRKEMEESMK 370
Score = 33.9 bits (74), Expect = 0.33
Identities = 28/129 (21%), Positives = 62/129 (48%), Gaps = 6/129 (4%)
Query: 35 SKSERKAMEAYRFDSSALERAASAAKELERSRHAKDALELSKLQESTRQQEQMAKIKEYE 94
+K E + + A D + KE+E S ++ +L+++ +++E+ I +
Sbjct: 338 TKKEIEEVRAIVQDGTLYNEQLRHRKEMEESMKRQE----EELEKTKKEKEEACMISKNL 393
Query: 95 AAIEQAKVEQKKVDYE--ERRKTLQEETKQHQMRAQYQDQLAKKRYEEQLVQQQKSQEEI 152
+ + +V Q+K E +RR+ E+ K+ + A Q + YEE+ +++ ++EE+
Sbjct: 394 MQLYEDEVRQRKEAEELVKRRREELEKVKKEKEEACSVGQNFMRLYEEEARRRKGTEEEL 453
Query: 153 LRKQEESVA 161
+ E A
Sbjct: 454 SKVAAEKDA 462
Score = 33.5 bits (73), Expect = 0.43
Identities = 26/107 (24%), Positives = 56/107 (52%), Gaps = 6/107 (5%)
Query: 60 KELERSRHAKDALELSKLQ-ESTRQQEQMAKIKEYEAAIEQAKVEQKKVDYEERRKTLQE 118
+EL R A++ L K + E T+++ + + + + ++ +K + EE K +E
Sbjct: 316 EELRRRVEAEEMLGKEKEEHERTKKEIEEVRAIVQDGTLYNEQLRHRK-EMEESMKRQEE 374
Query: 119 E---TKQHQMRAQYQDQLAKKRYEEQLVQQQKSQEEILRKQEESVAK 162
E TK+ + A + + YE++ V+Q+K EE+++++ E + K
Sbjct: 375 ELEKTKKEKEEACMISKNLMQLYEDE-VRQRKEAEELVKRRREELEK 420
>At5g52550.1 68418.m06525 expressed protein
Length = 360
Score = 38.3 bits (85), Expect = 0.015
Identities = 35/151 (23%), Positives = 69/151 (45%), Gaps = 3/151 (1%)
Query: 36 KSERKAMEAYRFDSSALERAASAAKELERSRHAKDALELSKLQESTRQQEQMAKIKEYEA 95
K ER +E + + R + + +L KL+E R E+ A I E +
Sbjct: 81 KQERDELERIKQAENKKNRLEKSIATSAAIMAELEKKKLRKLEEQKRLAEEGAAIAEKKK 140
Query: 96 A-IEQAKVEQKKVDYE-ERRKTLQEETKQHQMRAQYQDQLAKKRYEEQLVQQQKSQEEIL 153
+E+A + E E++K +++E + + AKK+ E + +++ K E
Sbjct: 141 RRLEKAIATTAAIRAELEKKKQMKKEGQLDAAVEEDSAYAAKKKQEREELERIKQAERKK 200
Query: 154 RKQEESVAKQEALRRATIEHEM-ELREKNKL 183
R+ E+S+A A+R + ++ +L E+ +L
Sbjct: 201 RRIEKSIATSAAIRAELEKKKLRKLEEQRRL 231
Score = 35.1 bits (77), Expect = 0.14
Identities = 26/98 (26%), Positives = 50/98 (51%), Gaps = 5/98 (5%)
Query: 134 AKKRYEEQLVQQQKSQEEILRKQEESVAKQEALRRATIEHEMELREKNKLXXXXXXXXXX 193
A+K+ + +V K E+ R+ E+++A A+ RA +E + +++++ +L
Sbjct: 18 ARKKKVKGVVDPIKQAEKKNRRLEKAIATSAAI-RAELEKKKQMKKEGQLEAADEEDSAD 76
Query: 194 XXXXXXNRDINLEQIRLKAAENRVTILE-SIKTAGSVV 230
RD E R+K AEN+ LE SI T+ +++
Sbjct: 77 AAKKKQERD---ELERIKQAENKKNRLEKSIATSAAIM 111
Score = 32.3 bits (70), Expect = 1.0
Identities = 26/92 (28%), Positives = 50/92 (54%), Gaps = 8/92 (8%)
Query: 28 AAPSTNLSKSERKAMEAYRFDSSALERAASAAKELERSRHAKDALELSKLQESTRQQEQM 87
AA L K ++ E + D++ E +A AAK+ + EL +++++ R++ ++
Sbjct: 151 AAIRAELEKKKQMKKEG-QLDAAVEEDSAYAAKKKQERE------ELERIKQAERKKRRI 203
Query: 88 AKIKEYEAAIEQAKVEQKKVDYEERRKTLQEE 119
K AAI +A++E+KK+ E ++ L EE
Sbjct: 204 EKSIATSAAI-RAELEKKKLRKLEEQRRLDEE 234
>At5g28300.1 68418.m03436 trihelix DNA-binding protein, putative
similar to GT-2 factor [Arabidopsis thaliana GI:416490
Length = 619
Score = 38.3 bits (85), Expect = 0.015
Identities = 24/108 (22%), Positives = 56/108 (51%), Gaps = 4/108 (3%)
Query: 79 ESTRQQEQMAKIKEYEA-AIEQAKVEQKKVDYEERRKTLQEETKQHQMRAQYQDQLAKKR 137
E+ R ++ K+ E A + + E++RK ++E ++ + + + L +
Sbjct: 251 ENQRNSIEVGKVGNVEDDAKSSSSSSLMMIMKEKKRKKRKKEKERFGVLKGFCEGLVRNM 310
Query: 138 YEEQLVQQQKSQEEILRKQEESVAKQEALRRATIEH---EMELREKNK 182
+Q +K E++++K+EE +A++EA ++ IE E+E+R + +
Sbjct: 311 IAQQEEMHKKLLEDMVKKEEEKIAREEAWKKQEIERVNKEVEIRAQEQ 358
>At1g60200.1 68414.m06781 splicing factor PWI domain-containing
protein / RNA recognition motif (RRM)-containing protein
contains Pfam profiles PF01480: PWI domain, PF00076: RNA
recognition motif. (a.k.a. RRM, RBD, or RNP domain)
Length = 899
Score = 38.3 bits (85), Expect = 0.015
Identities = 40/151 (26%), Positives = 75/151 (49%), Gaps = 18/151 (11%)
Query: 40 KAMEAYRFDSSALERAASAAKELERSRHAKDALEL--SKLQESTRQQEQMAKIKEYEAAI 97
K E R++ A ER S KE E+ R +DA ++L++ R++ + K ++YE
Sbjct: 444 KEQEMDRYEREA-ERERSR-KEREQRRKLEDAERAYQTRLRQWERREREKEKERQYEKEK 501
Query: 98 EQAKVEQKK--VDYEE----------RR--KTLQEETKQHQMRAQYQDQLAKKRYEEQLV 143
E+ K ++K + YEE RR + +E ++ Q+R + D + + EE++
Sbjct: 502 EKEKERKRKKEIRYEEEEEEDDDDSRRRWHRAALDERRRRQLREKEDDLADRLKEEEEVA 561
Query: 144 QQQKSQEEILRKQEESVAKQEALRRATIEHE 174
+ ++S EE +Q++ A + +A I E
Sbjct: 562 EAKRSAEEQNLQQQQLDALRILSGQAAIGSE 592
Score = 30.3 bits (65), Expect = 4.0
Identities = 18/80 (22%), Positives = 44/80 (55%), Gaps = 5/80 (6%)
Query: 103 EQKKVDYEERRKTLQEETKQHQMRAQYQDQLAKKRYEEQLVQ---QQKSQEEILRKQEES 159
+++++D ER + K+ + R + +D A++ Y+ +L Q +++ +E+ + ++E
Sbjct: 444 KEQEMDRYEREAERERSRKEREQRRKLED--AERAYQTRLRQWERREREKEKERQYEKEK 501
Query: 160 VAKQEALRRATIEHEMELRE 179
++E R+ I +E E E
Sbjct: 502 EKEKERKRKKEIRYEEEEEE 521
>At1g29570.1 68414.m03616 zinc finger protein-related contains
similarity to zinc finger proteins (CCCH type)
Length = 321
Score = 38.3 bits (85), Expect = 0.015
Identities = 31/128 (24%), Positives = 61/128 (47%), Gaps = 7/128 (5%)
Query: 83 QQEQMAKIKEYEAAIEQAKVEQKKVDYEERRKTLQEETKQHQMRAQYQDQLAKKRYE-EQ 141
++E+M +I+ E+ EQ++ D ER++ EE Q Q + +D + ++R E ++
Sbjct: 169 ERERMERIERQRREAEENLQEQRQRDSIERQRREAEENLQEQ---RQRDSIERQRREAQE 225
Query: 142 LVQQQKSQEEILRKQEESVAKQEALRRATIEHEMELREKNKLXXXXXXXXXXXXXXXXNR 201
+QQQ+ ++ I R++ E+ QE L++ ++ E +
Sbjct: 226 NLQQQRQRDSIERQRREA---QENLQQQRLQDMPENHNVDDQQNLQEQRRISIEKERTEA 282
Query: 202 DINLEQIR 209
+ LEQIR
Sbjct: 283 RLRLEQIR 290
Score = 38.3 bits (85), Expect = 0.015
Identities = 28/113 (24%), Positives = 53/113 (46%), Gaps = 4/113 (3%)
Query: 63 ERSRHAKDALELSKLQESTRQQEQMAKIKEYEAAIEQAKVEQKKVD-YEERRKTLQEETK 121
ER R + + + +E+ ++Q Q I+ E+ EQ++ D E +R+ QE +
Sbjct: 169 ERERMERIERQRREAEENLQEQRQRDSIERQRREAEENLQEQRQRDSIERQRREAQENLQ 228
Query: 122 QHQMRAQYQDQLAKKRYEEQLVQQQKSQEEILRKQEESVAKQEALRRATIEHE 174
Q + R + Q +R ++ +QQQ+ Q+ + + RR +IE E
Sbjct: 229 QQRQRDSIERQ---RREAQENLQQQRLQDMPENHNVDDQQNLQEQRRISIEKE 278
Score = 33.5 bits (73), Expect = 0.43
Identities = 21/83 (25%), Positives = 49/83 (59%), Gaps = 5/83 (6%)
Query: 101 KVEQKKVDYEERRKTLQEETKQHQMRAQYQDQLAKKRYE-EQLVQQQKSQEEILRKQEES 159
+ E+++++ ER++ EE Q Q + +D + ++R E E+ +Q+Q+ ++ I R++ E+
Sbjct: 167 RFERERMERIERQRREAEENLQEQ---RQRDSIERQRREAEENLQEQRQRDSIERQRREA 223
Query: 160 VAK-QEALRRATIEHEMELREKN 181
Q+ +R +IE + ++N
Sbjct: 224 QENLQQQRQRDSIERQRREAQEN 246
Score = 32.3 bits (70), Expect = 1.0
Identities = 23/104 (22%), Positives = 46/104 (44%), Gaps = 4/104 (3%)
Query: 36 KSERKAMEAYRFDSSALERAASAAKELERSRHAKDALELSK--LQESTRQQEQMAKIKEY 93
++E E + DS +ER A+E + + +D++E + QE+ +QQ Q I+
Sbjct: 182 EAEENLQEQRQRDS--IERQRREAEENLQEQRQRDSIERQRREAQENLQQQRQRDSIERQ 239
Query: 94 EAAIEQAKVEQKKVDYEERRKTLQEETKQHQMRAQYQDQLAKKR 137
++ +Q+ D E ++ Q Q R + + + R
Sbjct: 240 RREAQENLQQQRLQDMPENHNVDDQQNLQEQRRISIEKERTEAR 283
>At1g24460.1 68414.m03081 myosin-related contains TIGRFAM TIGR01612:
reticulocyte binding protein; similar to Myosin heavy
chain, non-muscle (Zipper protein) (Myosin II)
(SP:Q99323) {Drosophila melanogaster} similar to EST
gb|T76116
Length = 1730
Score = 38.3 bits (85), Expect = 0.015
Identities = 31/119 (26%), Positives = 60/119 (50%), Gaps = 8/119 (6%)
Query: 52 LERAASAAKELERSRHAKDALELSKLQESTRQQEQMAKIKEYEAAIEQAKVEQKKVDYEE 111
L A + K L ++R DAL+ +++T ++ +++E E A+E ++V + +++
Sbjct: 325 LSMAVTKGKALVQNR---DALKHQLSEKTTELANRLTELQEKEIALESSEVMKGQLEQSL 381
Query: 112 RRKTLQEETKQHQMRAQYQD----QLAKKRYEEQLVQQQKSQEEILRK-QEESVAKQEA 165
KT + E ++ + +L KK E+ L ++ K EE L K QE S A ++
Sbjct: 382 TEKTDELEKCYAELNDRSVSLEAYELTKKELEQSLAEKTKELEECLTKLQEMSTALDQS 440
>At3g50940.1 68416.m05577 AAA-type ATPase family protein contains
Pfam profile: ATPase family PF00004
Length = 451
Score = 37.9 bits (84), Expect = 0.020
Identities = 25/91 (27%), Positives = 47/91 (51%), Gaps = 8/91 (8%)
Query: 339 RLNKGFYRNLLMYGPPGTGKTLFSKKLAKHSGMDYAIMTGGDVAPMGKDAVAAIHKVFDW 398
R+ K + R L+YGPPGTGK+ +A H D + D+ + + A + ++
Sbjct: 241 RVGKAWKRGYLLYGPPGTGKSSLIAAIANHLNFDIYDL---DLTSLNNN--AELRRLL-- 293
Query: 399 ANTSRKGVLVFID-EADAFLRKRSSEKISED 428
+T+ + +LV D + L+ RS+++ + D
Sbjct: 294 MSTANRSILVVEDIDCSIELKDRSTDQENND 324
>At5g60030.1 68418.m07527 expressed protein
Length = 292
Score = 37.5 bits (83), Expect = 0.027
Identities = 34/158 (21%), Positives = 77/158 (48%), Gaps = 13/158 (8%)
Query: 35 SKSERKAMEAYRFDSSALERAASAAKELERSRHAK-DALELSKLQESTRQQEQMAKIKEY 93
S E K+ E + + ER + + R+ +A+ + + R +++M K K+
Sbjct: 67 SDRETKSTETKQSSDAKSERNVIDEFDGRKIRYRNSEAVSVESVYGRERDEKKMKKSKDA 126
Query: 94 EAAIEQAKVEQKKVDYEERRKTLQEETKQHQMRAQYQDQ-LAKKRYEEQLVQQQKSQEEI 152
+ E+ +K++ E+R + +E K+ + + +D+ + ++ +E+L +QKS +
Sbjct: 127 DVVDEKVN---EKLEAEQRSEERRERKKEKKKKKNNKDEDVVDEKVKEKLEDEQKSADRK 183
Query: 153 LRKQEES--------VAKQEALRRATIEHEMELREKNK 182
RK+++S V ++E L E++ ++KNK
Sbjct: 184 ERKKKKSKKNNDEDVVDEKEKLEDEQKSAEIKEKKKNK 221
Score = 33.9 bits (74), Expect = 0.33
Identities = 25/145 (17%), Positives = 63/145 (43%)
Query: 36 KSERKAMEAYRFDSSALERAASAAKELERSRHAKDALELSKLQESTRQQEQMAKIKEYEA 95
K +K+ +A D E+ + + ER K+ + ++ E++ + E E
Sbjct: 118 KKMKKSKDADVVDEKVNEKLEAEQRSEERRERKKEKKKKKNNKDEDVVDEKVKEKLEDEQ 177
Query: 96 AIEQAKVEQKKVDYEERRKTLQEETKQHQMRAQYQDQLAKKRYEEQLVQQQKSQEEILRK 155
K +KK + + + +E ++ + + + KK+ +++ V +K +E++ +
Sbjct: 178 KSADRKERKKKKSKKNNDEDVVDEKEKLEDEQKSAEIKEKKKNKDEDVVDEKEKEKLEDE 237
Query: 156 QEESVAKQEALRRATIEHEMELREK 180
Q K+E ++ + E+ E+
Sbjct: 238 QRSGERKKEKKKKRKSDEEIVSEER 262
Score = 31.9 bits (69), Expect = 1.3
Identities = 36/184 (19%), Positives = 67/184 (36%), Gaps = 7/184 (3%)
Query: 48 DSSALERAASAA----KELERSRHAKDALELSKLQESTRQQEQMAKIKEYEAAIEQ---A 100
D SA R ASAA K R +K+ S + + + +Q + K I++
Sbjct: 36 DVSAYLRRASAAFTELKSFHREIKSKETKPSSDRETKSTETKQSSDAKSERNVIDEFDGR 95
Query: 101 KVEQKKVDYEERRKTLQEETKQHQMRAQYQDQLAKKRYEEQLVQQQKSQEEILRKQEESV 160
K+ + + E + +M+ + ++ E+L +Q+S+E RK+E+
Sbjct: 96 KIRYRNSEAVSVESVYGRERDEKKMKKSKDADVVDEKVNEKLEAEQRSEERRERKKEKKK 155
Query: 161 AKQEALRRATIEHEMELREKNKLXXXXXXXXXXXXXXXXNRDINLEQIRLKAAENRVTIL 220
K E E E + + D+ E+ +L+ + I
Sbjct: 156 KKNNKDEDVVDEKVKEKLEDEQKSADRKERKKKKSKKNNDEDVVDEKEKLEDEQKSAEIK 215
Query: 221 ESIK 224
E K
Sbjct: 216 EKKK 219
>At4g33390.1 68417.m04746 hypothetical protein contains Pfam profile
PF05701: Plant protein of unknown function (DUF827)
Length = 779
Score = 37.5 bits (83), Expect = 0.027
Identities = 33/140 (23%), Positives = 67/140 (47%), Gaps = 6/140 (4%)
Query: 26 GVAAPSTNLSKSERKAMEAYRFDSSALERAASAAKELERSRHAKDALELSKLQESTRQQE 85
G+A ++ SK++ + +A +SA+ S +EL+ ++ DAL K +E
Sbjct: 265 GIADEASVASKAQLEVAQARH--TSAISELESVKEELQTLQNEYDALVKEKDLAVKEAEE 322
Query: 86 QMAKIKEYEAAIEQAKVEQ-KKVDYEERRKTLQEETKQHQMRAQYQDQLAKKRYEEQLVQ 144
+ KE E +E+ +E + E + E ++H++ A R+E++L Q
Sbjct: 323 AVIASKEVERKVEELTIELIATKESLECAHSSHLEAEEHRIGAAMLRDQETHRWEKELKQ 382
Query: 145 QQKSQEEILRKQEESVAKQE 164
++EE+ R ++ V+ +E
Sbjct: 383 ---AEEELQRLKQHLVSTKE 399
Score = 33.1 bits (72), Expect = 0.57
Identities = 37/161 (22%), Positives = 77/161 (47%), Gaps = 14/161 (8%)
Query: 25 VGVAAPSTNLSKSERKAMEAYRFDSSALERAASAAKELERSRHAKDALELSKLQ---EST 81
+ + +T++ K+ A + ++ +E+A S L+ + + LE+ K + +S
Sbjct: 441 ISLQEKTTDIQKAVASAKKELEEVNANVEKATSEVNCLKVASSSL-RLEIDKEKSALDSL 499
Query: 82 RQQEQMAKIK--EYEAAIEQAKVEQKKVDYEERRKTLQEETKQHQMRAQYQDQLAKKRYE 139
+Q+E MA + EA I+ + E V K+ ++ET++ + Q Q A + +
Sbjct: 500 KQREGMASVTVASLEAEIDITRCEIALV------KSKEKETREEMVELPKQLQQASQEAD 553
Query: 140 EQLVQQQKSQEEILRKQEESVAKQEALRRATIEHEMELREK 180
E + ++EE+ + QEE A+Q +T+E + +K
Sbjct: 554 EAKSFAELAREELRKSQEE--AEQAKAGASTMESRLFAAQK 592
>At3g30450.1 68416.m03852 hypothetical protein similar to At2g04970,
At2g15200, At1g32830, At2g14140, At4g03990, At5g34895,
At3g47270, At2g02200
Length = 800
Score = 37.5 bits (83), Expect = 0.027
Identities = 28/131 (21%), Positives = 60/131 (45%), Gaps = 2/131 (1%)
Query: 53 ERAASAAKELERSRHAKDALELSKLQESTRQQEQMAKIKEYEAAIEQAKVEQKKVDYEER 112
E+ KE E + E ++ QE +Q + +++E + E + EQ+KV+Y +
Sbjct: 428 EKQEEEGKEEEEEKVEYRGDEGTEKQEIPKQGNEEMEVEEEKQEEEGKEEEQEKVEYRDH 487
Query: 113 RKTLQ-EETKQHQMRAQYQDQLAKKRYEEQLVQQQKSQEEILRKQEESVAKQEALRRATI 171
T EET++ + Q +++ ++ +E+ V++ + QE + + T
Sbjct: 488 HSTCNVEETEKQENPKQGDEEMEREEGKEEKVEKHDEYND-AADQEAYINLSDDEDNDTA 546
Query: 172 EHEMELREKNK 182
E E ++K +
Sbjct: 547 PTEKESQQKKE 557
Score = 33.5 bits (73), Expect = 0.43
Identities = 32/157 (20%), Positives = 67/157 (42%), Gaps = 4/157 (2%)
Query: 27 VAAPSTNLSKSERKAMEAYRFDSSALERAASAAKELERSRHAKDALELSKLQESTRQQEQ 86
V P+ + + ++ F + KE E + ++ E + R E
Sbjct: 350 VLKPAIETVVHQSRKRKSMSFGEKRRTKRRGRKKEQEEEKQEEEGKEEELEKVEYRGDEG 409
Query: 87 MAKIKEYEAAIEQAKVEQKKVDYEERRKTLQEETKQHQ-MRAQYQDQLAKKRYEEQLVQQ 145
K + + E+ + E++K EE K +EE +++ + ++ K+ EE V++
Sbjct: 410 TEKQEIPKQGDEEMEGEEEK--QEEEGKEEEEEKVEYRGDEGTEKQEIPKQGNEEMEVEE 467
Query: 146 QKSQEEILRKQEESVAKQEALRRATIEHEMELREKNK 182
+K +EE +++E V ++ +E E E +E K
Sbjct: 468 EKQEEEGKEEEQEKVEYRDHHSTCNVE-ETEKQENPK 503
>At3g07780.1 68416.m00949 expressed protein
Length = 566
Score = 37.5 bits (83), Expect = 0.027
Identities = 26/123 (21%), Positives = 62/123 (50%), Gaps = 6/123 (4%)
Query: 27 VAAPSTNLSKSERKAMEAYRFDSSALERAASAAK-ELERSRHAKDALELSKLQESTRQQE 85
V T + K R +E + E+A A+ ++ER + + E+ ++ + +
Sbjct: 405 VGEEKTRMYKKARMGLE--ECEREVEEKAKQVAELQMERQKKKQQIEEVERIVRLKQAEA 462
Query: 86 QMAKIKEYEAAIEQAKVEQKKVDYEERRKTLQEETKQHQMRAQYQDQLAKKRYEEQLVQQ 145
+M ++K EA +E ++E ++ ++ KT +EE + ++ + + A+K Y + +++
Sbjct: 463 EMFQLKANEAKVEAERLE--RIVKAKKEKT-EEEYASNYLKLRLSEAEAEKEYLFEKIKE 519
Query: 146 QKS 148
Q+S
Sbjct: 520 QES 522
Score = 31.5 bits (68), Expect = 1.8
Identities = 26/78 (33%), Positives = 41/78 (52%), Gaps = 4/78 (5%)
Query: 40 KAMEAYRFDSSALERAASAAKELERSRHAKDALELSKLQESTRQQEQM-AKIKEYEAAIE 98
KA EA + ++ LER A KE +A + L+L +L E+ ++E + KIKE E+
Sbjct: 468 KANEA-KVEAERLERIVKAKKEKTEEEYASNYLKL-RLSEAEAEKEYLFEKIKEQESGGN 525
Query: 99 QAKVEQKKVDYEERRKTL 116
+ Q V Y + R+ L
Sbjct: 526 GGEASQ-AVMYSKIREML 542
>At2g46180.1 68415.m05742 intracellular protein transport protein
USO1-related similar to Intracellular protein transport
protein USO1 (Swiss-Prot:P25386) [Saccharomyces
cerevisiae]
Length = 725
Score = 37.5 bits (83), Expect = 0.027
Identities = 38/144 (26%), Positives = 67/144 (46%), Gaps = 9/144 (6%)
Query: 33 NLSKSERKAME-AYRFDSSALERAASAAKELERSRHAKDALELSKLQESTRQQEQM-AKI 90
N S+S +K E A + A++ A+ELE+ R L++ LQE +Q E ++
Sbjct: 176 NDSESHKKEKEFAEMLEERTRSMASAQARELEKEREKSANLQI-LLQEERKQNETFKEEL 234
Query: 91 KEYEAAIEQAKVEQKKVDYEERRKTLQEETKQHQMRAQYQDQ----LAKKRYEEQLVQQQ 146
+ E+ +E KV E K E +Q QM+ +Q ++++ +E +
Sbjct: 235 QSLRLDKEKTLMESNKVRRELDAKL--AEIRQLQMKLNGGEQHAFGISRENLKEVNKALE 292
Query: 147 KSQEEILRKQEESVAKQEALRRAT 170
K E+ K+ E A EA +++T
Sbjct: 293 KENNELKLKRSELEAALEASQKST 316
>At4g40020.1 68417.m05666 hypothetical protein
Length = 615
Score = 37.1 bits (82), Expect = 0.035
Identities = 34/153 (22%), Positives = 75/153 (49%), Gaps = 7/153 (4%)
Query: 33 NLSKSERKAMEAYRFDSSALERAASAAKE---LERSRHA--KDALELSKLQESTRQQEQM 87
NLSK ++ R A+ AKE + R+ ++ KDAL L K +E +++
Sbjct: 286 NLSKKAKEENHKVRDILKQAINEANVAKEAAGIARAENSNLKDAL-LDKEEELQFALKEI 344
Query: 88 AKIKEYEAAIEQAKVEQKKVDYEERRKTLQEETKQHQMRAQYQDQLAKKRYEEQLVQQQK 147
++K EA + +++ K E ++EE ++ R + + + E+++ +++K
Sbjct: 345 ERVKVNEA-VANDNIKKLKKMLSEIEVAMEEEKQRSLNRQESMPKEVVEVVEKKIEEKEK 403
Query: 148 SQEEILRKQEESVAKQEALRRATIEHEMELREK 180
+E+ K+E+ +K+E + + + E +E+
Sbjct: 404 KEEKKENKKEKKESKKEKKEHSEKKEDKEKKEQ 436
Score = 33.5 bits (73), Expect = 0.43
Identities = 34/160 (21%), Positives = 73/160 (45%), Gaps = 5/160 (3%)
Query: 25 VGVAAPSTNLSKSERKAMEAYRFDSSALERAASAAKELERSRHAKDALELSKLQESTRQQ 84
+ VA+P + +K E Y+ +S LE + L++ KD + L+ + ++
Sbjct: 10 IDVASPRYSSNKVADIGTELYKMKAS-LENRENEVVSLKQELLKKDIF-IKNLEAAEKKL 67
Query: 85 EQMAKIKEYEAAIEQAKVEQKKVDYEERRKTLQEETKQHQMRAQYQDQLAKKRYE-EQLV 143
K + E +A VE+ KV+ ++ + + +D + + ++ E L
Sbjct: 68 LDSFKDQSRELEETKALVEESKVEIASLKEKIDTSYNSQDSSEEDEDDSSVQDFDIESLK 127
Query: 144 QQQKSQEEILRKQEESVAKQEALRRATIEHEMELREKNKL 183
+ +S +E L + E+ A+ +L+ + + EM+ KN+L
Sbjct: 128 TEMESTKESLAQAHEA-AQASSLKVSELLEEMK-SVKNEL 165
>At4g27980.1 68417.m04014 expressed protein
Length = 565
Score = 37.1 bits (82), Expect = 0.035
Identities = 31/126 (24%), Positives = 62/126 (49%), Gaps = 8/126 (6%)
Query: 60 KELERSRHAKDALELSKLQESTRQQEQMAKIKEYEAAIEQAKVEQKKVDYE----ERRKT 115
++ E+ H K E + E + +E+ + E + A++++K+ E E +
Sbjct: 155 EKAEKEFHLKQRAETERRNEESEAREKDLRALEEAVKEKTAELKRKEETLELKMKEEAEK 214
Query: 116 LQEETKQHQMRAQYQDQLAKKRYEEQLVQQQKSQEEILRKQEESVAKQEALRRATIEHEM 175
L+EET+ + + +++ +KR +E L +Q EE R Q + + E+ +R+ +E E
Sbjct: 215 LREETELMRKGLEIKEKTLEKRLKE-LELKQMELEETSRPQ---LVEAESRKRSNLEIEP 270
Query: 176 ELREKN 181
L KN
Sbjct: 271 PLLVKN 276
>At4g11080.1 68417.m01800 high mobility group (HMG1/2) family
protein similar to SP|P40618 High mobility group protein
HMG2A {Gallus gallus}; contains Pfam profile PF00505:
HMG (high mobility group) box
Length = 446
Score = 37.1 bits (82), Expect = 0.035
Identities = 26/122 (21%), Positives = 60/122 (49%), Gaps = 3/122 (2%)
Query: 35 SKSERKAMEAYRFDSSALERAASAAKELERSRHAKDALELSKLQESTRQQEQMAK--IKE 92
+K R + +A + + +E + + K E KD +E+ + E + +++ + +KE
Sbjct: 11 AKKSRNSRKALKQKNEIVESSPVSDKGKETKSFEKDLMEMQAMLEKMKIEKEKTEDLLKE 70
Query: 93 YEAAIEQAKVEQKKVDYEERRKTLQEETKQHQMRAQYQDQLAKKRYEEQLVQQQKSQEEI 152
+ + + +VEQ+K+ E ++ +E K + M + LA+ E++ +++K E
Sbjct: 71 KDEILRKKEVEQEKLKTELKKLQKMKEFKPN-MTFAFSQSLAQTEEEKKGKKKKKDCAET 129
Query: 153 LR 154
R
Sbjct: 130 KR 131
Score = 29.9 bits (64), Expect = 5.4
Identities = 25/86 (29%), Positives = 48/86 (55%), Gaps = 8/86 (9%)
Query: 85 EQMAKIK-EYEAAIEQAKV--EQKKVDYEERRKTLQEETKQHQMRAQYQDQLAKKRYEEQ 141
E+ A +K E ++ IE AK+ E+ K EE++ + K+++ + + K+ EE+
Sbjct: 259 ERRAALKGENKSVIEVAKMAGEEWKNLSEEKKAPYDQMAKKNKEIYLQEMEGYKRTKEEE 318
Query: 142 LVQQQKSQEEILRKQEESVAKQEALR 167
+ Q+K +EE ++ + KQEAL+
Sbjct: 319 AMSQKKEEEEFMK-----LHKQEALQ 339
>At3g58840.1 68416.m06558 expressed protein
Length = 318
Score = 37.1 bits (82), Expect = 0.035
Identities = 37/139 (26%), Positives = 69/139 (49%), Gaps = 4/139 (2%)
Query: 40 KAMEAYRFDSSALERAASAAKELERS-RHAKDALELSKLQESTRQQEQMAKIKEYEAAIE 98
K +E Y + ALE ++ A ELE + D L ++ L + E++A++K+ A I
Sbjct: 76 KEIEEYEEEKKALEAISTRAVELETEVSNLHDDL-ITSLNGVDKTAEEVAELKKALAEIV 134
Query: 99 QAKVEQKKVDYEERRKTLQEETKQHQMRAQYQDQLAKKRYEEQLVQQQKSQEEILRKQEE 158
+ K+E + + E RK E K+ + + L + EE+ ++ +S+EE+ +E
Sbjct: 135 E-KLEGCEKEAEGLRKDRAEVEKRVRDLERKIGVLEVREMEEK-SKKLRSEEEMREIDDE 192
Query: 159 SVAKQEALRRATIEHEMEL 177
+ E L++ I +EL
Sbjct: 193 KKREIEELQKTVIVLNLEL 211
>At3g50930.1 68416.m05576 AAA-type ATPase family protein contains
Pfam profile: ATPase family PF00004
Length = 576
Score = 37.1 bits (82), Expect = 0.035
Identities = 15/34 (44%), Positives = 20/34 (58%)
Query: 339 RLNKGFYRNLLMYGPPGTGKTLFSKKLAKHSGMD 372
R+ K + R L+YGPPGTGK+ +A H D
Sbjct: 293 RVGKAWKRGYLLYGPPGTGKSSLIAAMANHLNFD 326
Score = 31.5 bits (68), Expect = 1.8
Identities = 21/79 (26%), Positives = 41/79 (51%), Gaps = 3/79 (3%)
Query: 70 DALELSKLQESTRQQEQMAKIKEYEAAIEQAKVEQKKVDYEE-RRKTLQEETKQHQMRAQ 128
+A E++ + + + + K E IE KV KK++ E+ + KT ++E + + +
Sbjct: 468 EATEVTPAEVAEQLMRNDSVDKVLEGLIEFLKV--KKIENEQDKAKTEKQELENKKKTKE 525
Query: 129 YQDQLAKKRYEEQLVQQQK 147
D + KK +EQLV+ +
Sbjct: 526 GTDSVVKKEVDEQLVRNDR 544
>At3g20350.1 68416.m02578 expressed protein
Length = 673
Score = 37.1 bits (82), Expect = 0.035
Identities = 39/147 (26%), Positives = 72/147 (48%), Gaps = 11/147 (7%)
Query: 36 KSERKAMEAYRFDSSALERAASAAKELERSRHAKDALELSKLQES-TRQQEQMAKIKEY- 93
+S++K +E + S ERAA ++E E+ R D ++ QE TRQ+ ++ K
Sbjct: 238 RSQKKKLEQFLKKVSE-ERAAWRSREHEKVRAIIDDMKADMNQEKKTRQRLEIVNSKLVN 296
Query: 94 EAAIEQAKVEQKKVDYEERRKTLQEETKQHQMRAQYQDQLAKKRYEEQLVQQQKSQEEIL 153
E A + V++ DY Q+E K ++ + D+LAK+ EE + + + E +
Sbjct: 297 ELADSKLAVKRYMHDY-------QQERKARELIEEVCDELAKE-IEEDKAEIEALKSESM 348
Query: 154 RKQEESVAKQEALRRATIEHEMELREK 180
+EE ++ L+ A + E ++ K
Sbjct: 349 NLREEVDDERRMLQMAEVWREERVQMK 375
>At5g32440.1 68418.m03825 expressed protein
Length = 264
Score = 36.7 bits (81), Expect = 0.047
Identities = 28/86 (32%), Positives = 49/86 (56%), Gaps = 5/86 (5%)
Query: 51 ALERAASAAKELERSRHAK---DALELSKLQESTRQQEQMAKIKEYEAAIEQAKVEQKKV 107
A RAA A + LE+S +A+ DA++ + QE+ ++Q+ I + + +++A V Q+K
Sbjct: 149 AKARAARALEALEKSINARTGTDAMQ-NLQQENMMLKQQLEAIVQENSLLKRAVVTQQKR 207
Query: 108 DYEERRKTLQEETKQHQMRAQYQDQL 133
E ++ QE Q+ QYQ+QL
Sbjct: 208 QRESEDQS-QELQHLRQLVTQYQEQL 232
>At5g24880.1 68418.m02946 expressed protein ; expression supported
by MPSS
Length = 443
Score = 36.7 bits (81), Expect = 0.047
Identities = 25/128 (19%), Positives = 63/128 (49%), Gaps = 5/128 (3%)
Query: 53 ERAASAAKELERSRHAKDALELSKLQESTRQQEQMAKIKEYEAAIEQAKVEQKKVDYEER 112
E+ ++E + ++ +S +++ KI E E E+ E K+V+ E
Sbjct: 272 EKLIKNEDDIEEKTEEMKEQDNNQANKSEEEEDVKKKIDENETP-EKVDTESKEVESVE- 329
Query: 113 RKTLQEETKQHQMRAQYQDQLAKKRYEEQLVQQQKSQEEILRKQEESVAKQEALRRATIE 172
+T QE K+ +++ + ++++ ++ E++ V++ +E++ +++E V E + E
Sbjct: 330 -ETTQE--KEEEVKEEGKERVEEEEKEKEKVKEDDQKEKVEEEEKEKVKGDEEKEKVKEE 386
Query: 173 HEMELREK 180
E ++K
Sbjct: 387 ESAEGKKK 394
Score = 36.7 bits (81), Expect = 0.047
Identities = 20/97 (20%), Positives = 57/97 (58%), Gaps = 6/97 (6%)
Query: 70 DALELSKLQESTRQQEQMAKIKEYEAAIEQAKVEQKKVDYEERRKTLQEETKQHQMRAQY 129
++ E+ ++E+T+++E+ K +E + +E+ + E++KV +++++ ++EE K+ +
Sbjct: 321 ESKEVESVEETTQEKEEEVK-EEGKERVEEEEKEKEKVKEDDQKEKVEEEEKE-----KV 374
Query: 130 QDQLAKKRYEEQLVQQQKSQEEILRKQEESVAKQEAL 166
+ K++ +E+ + K +E + K+E A + +
Sbjct: 375 KGDEEKEKVKEEESAEGKKKEVVKGKKESPSAYNDVI 411
>At4g31570.1 68417.m04483 expressed protein
Length = 2712
Score = 36.7 bits (81), Expect = 0.047
Identities = 37/160 (23%), Positives = 74/160 (46%), Gaps = 20/160 (12%)
Query: 26 GVAAPSTNLSKSERKAMEAYRFDSSALER--AASAAKELERSRHAKDALELSKLQESTRQ 83
G + + S+ +EA D + +E AS K+L+++ H +Q+ TR+
Sbjct: 1771 GATSHGQHFELSDSNVVEATSRDIAVVETPDVASLTKDLDQALH---------VQKLTRE 1821
Query: 84 QEQMAKIKEYEAAIEQAKVEQKKVDYEERRKTLQEETKQHQMRAQYQDQLAKKRYEEQLV 143
+ + K+ E +++K ++ +E K QEE K +R + + K + LV
Sbjct: 1822 ERDLYMAKQQSLVAENEALDKKIIELQEFLK--QEEQKSASVREKLNVAVRKGK---ALV 1876
Query: 144 QQQKSQEEILRKQEESVA--KQEALRR--ATIEHEMELRE 179
QQ+ S ++ + + + K E ++R +E+E + RE
Sbjct: 1877 QQRDSLKQTIEEVNAELGRLKSEIIKRDEKLLENEKKFRE 1916
Score = 34.3 bits (75), Expect = 0.25
Identities = 36/145 (24%), Positives = 69/145 (47%), Gaps = 8/145 (5%)
Query: 25 VGVAAPSTNLSKSERKAMEAYRFDSSALERAASAAKELERSRHAKDALELSKLQESTRQQ 84
+G+ + K K + A + S L+ ++ +L AKD LE+ L ++ ++
Sbjct: 2337 LGILVRERDSMKERVKELLAGQASHSELQEKVTSLSDLLA---AKD-LEIEALMQALDEE 2392
Query: 85 E-QMAKIKEYEAAIEQAKVEQKKVDYEERRKTLQEETKQHQMRAQYQDQLAKKRYEEQLV 143
E QM +K +EQ +V+QK +D ++ + + +K+ + D+L E L
Sbjct: 2393 ESQMEDLKLRVTELEQ-EVQQKNLDLQKAEASRGKISKKLSITVDKFDEL-HHLSENLLA 2450
Query: 144 QQQKSQEEIL-RKQEESVAKQEALR 167
+ +K Q+++ R E S +QE R
Sbjct: 2451 EIEKLQQQVQDRDTEVSFLRQEVTR 2475
>At4g27595.1 68417.m03964 protein transport protein-related low
similarity to SP|P25386 Intracellular protein transport
protein USO1 {Saccharomyces cerevisiae}
Length = 1212
Score = 36.7 bits (81), Expect = 0.047
Identities = 39/158 (24%), Positives = 72/158 (45%), Gaps = 12/158 (7%)
Query: 38 ERKAMEAYRFDSSALERAASAAKELERSRHAKDALELSKLQESTRQQEQMAKIKEYEAAI 97
+++ E+ +SA E A K+LE + HA EL + + + I E +
Sbjct: 320 DKQVEESKELKTSASESLDLAMKQLEENNHALHEAELGNATLKEKVESLVTTIGRQENDL 379
Query: 98 EQ-------AKVEQKKVD-YEERRKTLQEETKQHQMRAQYQDQLAKKRYEEQLVQQQKSQ 149
E+ +K E K++ E K+ E T+ ++RA ++ A + + L ++ +
Sbjct: 380 EESQHQVCISKEETSKLEKLVESIKSDLETTQGEKVRALLNEKTATSQIQNLLSEKTELA 439
Query: 150 EEI--LRKQEESVAK-QEALRRATIEHEMELRE-KNKL 183
E+ +K+EE + K E+L E +E +E K KL
Sbjct: 440 TELENCKKEEEKIKKAMESLTLDLQEVSVEAKEAKEKL 477
Score = 32.7 bits (71), Expect = 0.76
Identities = 30/159 (18%), Positives = 77/159 (48%), Gaps = 7/159 (4%)
Query: 27 VAAPSTNLSKSERKAMEAYRFDSSALERAASAAKELERSRHAKDAL--ELSKLQESTRQQ 84
++A +L + E K + + R + K++E + L + +KLQ S Q+
Sbjct: 687 LSAAKESLVEKETKLLSTVQEAEELRRRELACLKKIEELSAVNERLVDKETKLQSSI-QE 745
Query: 85 EQMAKIKEYE--AAIEQAKVEQKK-VDYEERRKTLQEETKQ-HQMRAQYQDQLAKKRYEE 140
++ K +E E IE+ + ++ V+ E + +T+ +E ++ + + YQ ++ + +
Sbjct: 746 VEVLKEREAENIKQIEELSLSNERLVEKEAKLQTVVQENEELREKESAYQKKIEELSKVD 805
Query: 141 QLVQQQKSQEEILRKQEESVAKQEALRRATIEHEMELRE 179
++ ++++ + ++ E + ++E IE +L+E
Sbjct: 806 EIFADREAKLQSSTQENEELREREVAYLKKIEELAKLQE 844
Score = 29.5 bits (63), Expect = 7.1
Identities = 28/112 (25%), Positives = 53/112 (47%), Gaps = 5/112 (4%)
Query: 59 AKELERSRHAKDA-LELSKLQESTRQ-QEQMAKIKEYEA-AIEQAKVEQKKVDYEERRKT 115
A + +SR K L + + QE R+ EQ+ ++K+ +A A++ K E +K+ E K
Sbjct: 74 AFQKSQSRLGKGTGLLVQQTQEDLRKANEQIERLKKDKAKALDDLK-ESEKLTKEANEKL 132
Query: 116 LQEETKQHQMRAQYQ-DQLAKKRYEEQLVQQQKSQEEILRKQEESVAKQEAL 166
+ QH + ++ E+ ++ +E +K+ ES+ Q AL
Sbjct: 133 REALAAQHHAEKSSEIEKFRAVELEQAGIEAVHKKEVSWKKEVESIRSQHAL 184
>At3g13190.2 68416.m01651 myosin heavy chain-related contains weak
similarity to Myosin II heavy chain, non muscle
(Swiss-Prot:P05659) [Acanthamoeba castellanii]
Length = 316
Score = 36.7 bits (81), Expect = 0.047
Identities = 34/155 (21%), Positives = 69/155 (44%), Gaps = 16/155 (10%)
Query: 42 MEAYRFDSSALERAASAAKELERSRHAKDALELSKLQESTRQQEQMAKIKEYEAAIEQAK 101
ME+ + + +E+A S KE+E+ A+E L++ T+ + + E E I +
Sbjct: 128 MESLKLELQNVEKAHSELKEIEQRERDHQAIE--DLKKETKDAKTQLSLLEEELKIAVFE 185
Query: 102 VEQKKVDYEERRKTLQEETKQHQMR--AQYQDQLAKKRYEEQ------------LVQQQK 147
++ K E R+ L + R A ++ A++ E + L ++
Sbjct: 186 AQEAKDAEEHARERLNVAVLESDFRSLAVVKESAAEELTETEALRACRDETLKTLEMSER 245
Query: 148 SQEEILRKQEESVAKQEALRRATIEHEMELREKNK 182
E+I ++++ K E + ATI ++EL+ + K
Sbjct: 246 EIEDIKAATQDALKKAEMAQEATIVVDVELKRRRK 280
>At3g13190.1 68416.m01650 myosin heavy chain-related contains weak
similarity to Myosin II heavy chain, non muscle
(Swiss-Prot:P05659) [Acanthamoeba castellanii]
Length = 316
Score = 36.7 bits (81), Expect = 0.047
Identities = 34/155 (21%), Positives = 69/155 (44%), Gaps = 16/155 (10%)
Query: 42 MEAYRFDSSALERAASAAKELERSRHAKDALELSKLQESTRQQEQMAKIKEYEAAIEQAK 101
ME+ + + +E+A S KE+E+ A+E L++ T+ + + E E I +
Sbjct: 128 MESLKLELQNVEKAHSELKEIEQRERDHQAIE--DLKKETKDAKTQLSLLEEELKIAVFE 185
Query: 102 VEQKKVDYEERRKTLQEETKQHQMR--AQYQDQLAKKRYEEQ------------LVQQQK 147
++ K E R+ L + R A ++ A++ E + L ++
Sbjct: 186 AQEAKDAEEHARERLNVAVLESDFRSLAVVKESAAEELTETEALRACRDETLKTLEMSER 245
Query: 148 SQEEILRKQEESVAKQEALRRATIEHEMELREKNK 182
E+I ++++ K E + ATI ++EL+ + K
Sbjct: 246 EIEDIKAATQDALKKAEMAQEATIVVDVELKRRRK 280
>At2g27750.1 68415.m03363 nucleolar matrix protein-related contains
Pfam domain, PF04935: Surfeit locus protein 6
Length = 181
Score = 36.7 bits (81), Expect = 0.047
Identities = 23/109 (21%), Positives = 55/109 (50%), Gaps = 4/109 (3%)
Query: 60 KELERSRHAKDALELSKLQESTRQQEQMAKIKEYEAAIEQAKVEQKKVDYEERRKTLQEE 119
K + +++ + A+ L L++ + + +AK ++AAI +A + D + +K + +E
Sbjct: 65 KRVSKAKELEMAMTLEALKKDQEKGDIVAKNHSWQAAISRAAGIKIHDDPKRLKKRIHKE 124
Query: 120 TKQHQMRAQYQDQLAKKRYEEQLVQQQKSQEEIL----RKQEESVAKQE 164
TK + + + + + + +QQK E ++ +K+ +AK+E
Sbjct: 125 TKMREKNTEKWKERVDVQQKFRAEKQQKRSENVIDRIQQKKMRKIAKRE 173
>At1g79150.1 68414.m09229 expressed protein ; expression supported
by MPSS
Length = 495
Score = 36.7 bits (81), Expect = 0.047
Identities = 23/81 (28%), Positives = 41/81 (50%)
Query: 102 VEQKKVDYEERRKTLQEETKQHQMRAQYQDQLAKKRYEEQLVQQQKSQEEILRKQEESVA 161
VE K + +RKTLQEE ++ D L K + +L + +S++ L + E A
Sbjct: 64 VEDKYEEERSKRKTLQEEKGNGEILVDPVDVLPVKTLDGKLHYRTESKKSKLAEAETDEA 123
Query: 162 KQEALRRATIEHEMELREKNK 182
+++ L + ++ + REK K
Sbjct: 124 EKDVLEDEHVLNKSQRREKAK 144
>At1g77470.1 68414.m09021 replication factor C 36 kDA, putative
similar to SWISS-PROT:P40937 activator 1 36 kDa subunit
(Replication factor C 36 kDa subunit, A1 36 kDa subunit,
RF-C 36 kDa subunit, RFC36) [Homo sapiens]
Length = 369
Score = 36.7 bits (81), Expect = 0.047
Identities = 40/118 (33%), Positives = 55/118 (46%), Gaps = 14/118 (11%)
Query: 329 RDIAIATKNTRLNKGFYRNLLMYGPPGTGKTLFSKKLA-KHSGMDYAIMTGGDVAPMGKD 387
RDI I T + N+ +LL+YGPPGTGKT +A K G Y M A +
Sbjct: 57 RDI-IDTIDRLTNENKLPHLLLYGPPGTGKTSTILAVARKLYGPKYRNMILELNASDDRG 115
Query: 388 AVAAIHKVFDWANTSRKGV------LVFIDEADA------FLRKRSSEKISEDLRAAL 433
++ D+A+T + LV +DEADA F +R EK ++ R AL
Sbjct: 116 IDVVRQQIQDFASTQSFSLGKSSVKLVLLDEADAMTKDAQFALRRVIEKYTKSTRFAL 173
>At1g55255.1 68414.m06311 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 383
Score = 36.7 bits (81), Expect = 0.047
Identities = 34/140 (24%), Positives = 59/140 (42%), Gaps = 6/140 (4%)
Query: 38 ERKAMEAYRFDSSALERAASAAKELERSRHAKDALELSKLQESTRQQEQMAKIKEYEAAI 97
E + A+ +S+ ER A+A E+ R D E L+ ++ K+KE EA
Sbjct: 83 ELRVKAAHETESACQERLATAKAEIAELRTQLDLSEREVLE-----LKEGIKVKEQEAEA 137
Query: 98 EQAKVEQKKVDYEERRKTLQEETKQHQMRAQYQDQLAKKRYE-EQLVQQQKSQEEILRKQ 156
A++E YE+ + Q +Q R Y +L + + + S+++++ KQ
Sbjct: 138 SIAEMETIGQAYEDMQTQNQHLLQQVAERDDYNIKLVSESVKTKHAYNTHLSEKQVMEKQ 197
Query: 157 EESVAKQEALRRATIEHEME 176
V +A I H E
Sbjct: 198 LHQVNASVENFKARIAHNEE 217
>At1g20920.1 68414.m02619 DEAD box RNA helicase, putative similar to
RNA helicase [Rattus norvegicus] GI:897915; contains
Pfam profiles PF00270: DEAD/DEAH box helicase, PF00271:
Helicase conserved C-terminal domain
Length = 1166
Score = 36.7 bits (81), Expect = 0.047
Identities = 27/123 (21%), Positives = 62/123 (50%), Gaps = 6/123 (4%)
Query: 36 KSERKAMEAYRFDSSALERAASAAKELERSRHAKDALELSKLQESTRQQEQMAKIKEYEA 95
K + K E R D ++R + E +S ++D +E ++ R E+ +E+E
Sbjct: 73 KRKEKERERRRRDKDRVKRRS----ERRKSSDSEDDVEEEDERDKRRVNEKERGHREHER 128
Query: 96 AIEQAKVEQKKVDYEERRKTLQEETKQHQMRAQYQDQLAKKRYEEQLVQQQKSQEEILRK 155
++ K ++ + EER+ +E K + R + +++ K+R +E+ ++++ E R+
Sbjct: 129 --DRGKDRKRDREREERKDKEREREKDRERREREREEREKERVKERERREREDGERDRRE 186
Query: 156 QEE 158
+E+
Sbjct: 187 REK 189
Score = 36.3 bits (80), Expect = 0.062
Identities = 32/152 (21%), Positives = 68/152 (44%), Gaps = 5/152 (3%)
Query: 36 KSERKAMEAYRFDSSALERAASAAKELERSRHA---KDALELSKLQESTRQQE-QMAKIK 91
K + + R + ER KE ER +D E K + S R +E + ++
Sbjct: 146 KEREREKDRERREREREEREKERVKERERREREDGERDRREREKERGSRRNRERERSREV 205
Query: 92 EYEAAIEQAKVEQKKVDYEERRKTLQEETKQHQMRAQYQDQLAKKRYEEQ-LVQQQKSQE 150
E + + K + K+ E + +E K ++++D +K E+ +++K++E
Sbjct: 206 GNEESDDDVKRDLKRRRKEGGERKEKEREKSVGRSSRHEDSPKRKSVEDNGEKKEKKTRE 265
Query: 151 EILRKQEESVAKQEALRRATIEHEMELREKNK 182
E L +++ + ++ RR ++ EL+ K +
Sbjct: 266 EELEDEQKKLDEEVEKRRRRVQEWQELKRKKE 297
Score = 35.1 bits (77), Expect = 0.14
Identities = 31/124 (25%), Positives = 55/124 (44%), Gaps = 11/124 (8%)
Query: 53 ERAASAAKELERSRHAKDALELSKLQESTRQQEQMAKIKEYEAAIEQAKVEQKKVDYEER 112
ER + +E ERSR + +ES ++ K + E + K +K V
Sbjct: 190 ERGSRRNRERERSREVGN-------EESDDDVKRDLKRRRKEGGERKEKEREKSVG---- 238
Query: 113 RKTLQEETKQHQMRAQYQDQLAKKRYEEQLVQQQKSQEEILRKQEESVAKQEALRRATIE 172
R + E++ + + ++ KK EE+L +QK +E + K+ V + + L+R E
Sbjct: 239 RSSRHEDSPKRKSVEDNGEKKEKKTREEELEDEQKKLDEEVEKRRRRVQEWQELKRKKEE 298
Query: 173 HEME 176
E E
Sbjct: 299 AESE 302
Score = 31.9 bits (69), Expect = 1.3
Identities = 28/146 (19%), Positives = 61/146 (41%), Gaps = 4/146 (2%)
Query: 36 KSERKAMEAYRFDSSALERAASAAKELERSRHAKDALELSKLQESTRQQEQMAKIKEYEA 95
+ + K E R +R S+ E + R + E K +E R++ ++K
Sbjct: 35 RKKDKGSEKRREKDRRKKRVKSSDSEDDYDRDDDEEREKRKEKERERRRRDKDRVKRRSE 94
Query: 96 AIEQAKVEQKKVDYEER-RKTLQEETKQHQMRAQYQDQLAKKRYEEQLVQQQKSQEEILR 154
+ + E + +ER ++ + E+ + H+ +++ K R ++ +++K +E
Sbjct: 95 RRKSSDSEDDVEEEDERDKRRVNEKERGHR---EHERDRGKDRKRDREREERKDKERERE 151
Query: 155 KQEESVAKQEALRRATIEHEMELREK 180
K E ++ R E E RE+
Sbjct: 152 KDRERREREREEREKERVKERERRER 177
>At1g10320.1 68414.m01162 U2 snRNP auxiliary factor-related similar
to U2 small nuclear ribonucleoprotein auxiliary factor
35 kD subunit related protein 1 (sp|Q15695)
Length = 757
Score = 36.7 bits (81), Expect = 0.047
Identities = 35/132 (26%), Positives = 68/132 (51%), Gaps = 12/132 (9%)
Query: 58 AAKELERSRHAKDALELSKLQESTRQQEQMAKIKEYEAAIEQAKVEQ--KKV---DYEER 112
A ++ E RH + A E +ES + +M++ KE A+++ K +Q K++ + EE
Sbjct: 4 ANEKEEEERHEEAAGEKESFEESKEKAAEMSR-KEKRKAMKKLKRKQVRKEIAAKEREEA 62
Query: 113 RKTLQEETKQHQMRAQYQDQLAK-----KRYEEQLVQQQKSQEEILRKQEESVAKQEALR 167
+ L + +Q +++A ++ + K +EE +++ E +K+EE AK+E
Sbjct: 63 KAKLNDPAEQERLKAIEEEDARRREKELKDFEESERAWREAMEIKRKKEEEEEAKREEEE 122
Query: 168 RATIEHEMELRE 179
R + E ELR+
Sbjct: 123 RRWKDLE-ELRK 133
Score = 36.3 bits (80), Expect = 0.062
Identities = 27/111 (24%), Positives = 57/111 (51%), Gaps = 5/111 (4%)
Query: 53 ERAASAAKELERSRHAKD-ALELSKLQESTRQQEQMAKIKEYEAAI---EQAKVEQKKVD 108
ER AA E E +K+ A E+S+ ++ ++ K E A E+AK +
Sbjct: 11 ERHEEAAGEKESFEESKEKAAEMSRKEKRKAMKKLKRKQVRKEIAAKEREEAKAKLNDPA 70
Query: 109 YEERRKTLQEETKQHQMRAQYQDQLAKKRYEEQL-VQQQKSQEEILRKQEE 158
+ER K ++EE + + + + +++ + E + ++++K +EE +++EE
Sbjct: 71 EQERLKAIEEEDARRREKELKDFEESERAWREAMEIKRKKEEEEEAKREEE 121
Score = 33.5 bits (73), Expect = 0.43
Identities = 28/130 (21%), Positives = 60/130 (46%), Gaps = 5/130 (3%)
Query: 36 KSERKAMEAYRFDSSALERAASAAKELERSRHAKDALELSKLQESTRQQEQMAKIKEYEA 95
+ E A E F+ S + A + KE ++ ++ K + ++E AK+ +
Sbjct: 12 RHEEAAGEKESFEESKEKAAEMSRKEKRKAMKKLKRKQVRKEIAAKEREEAKAKLND--- 68
Query: 96 AIEQAKVEQKKVDYEERRKTLQEETKQHQMRAQYQDQLAKKRYEEQLVQQQKSQEEILRK 155
EQ ++ K ++ E+ R+ +E + +++ + KR +E+ + ++ +EE K
Sbjct: 69 PAEQERL--KAIEEEDARRREKELKDFEESERAWREAMEIKRKKEEEEEAKREEEERRWK 126
Query: 156 QEESVAKQEA 165
E + K EA
Sbjct: 127 DLEELRKLEA 136
Score = 31.5 bits (68), Expect = 1.8
Identities = 29/116 (25%), Positives = 61/116 (52%), Gaps = 10/116 (8%)
Query: 72 LELSKLQESTRQQEQMAKIKEYEAAIEQAKVEQKKVDYEERRKTLQEETKQHQMR---AQ 128
+E + +E + E+ A KE + E++K + ++ +E+RK +++ K+ Q+R A
Sbjct: 1 MEQANEKEEEERHEEAAGEKE---SFEESKEKAAEMSRKEKRKAMKK-LKRKQVRKEIAA 56
Query: 129 YQDQLAKKRYEEQLVQQQKS--QEEILRKQEESVAKQEALRRATIEHEMELREKNK 182
+ + AK + + Q++ +EE R++E+ + E RA E ME++ K +
Sbjct: 57 KEREEAKAKLNDPAEQERLKAIEEEDARRREKELKDFEESERAWRE-AMEIKRKKE 111
>At5g52410.2 68418.m06502 expressed protein
Length = 761
Score = 36.3 bits (80), Expect = 0.062
Identities = 31/114 (27%), Positives = 54/114 (47%), Gaps = 5/114 (4%)
Query: 56 ASAAKELERSRHAKDALELSKLQESTRQQEQMAKI-KEYEAAIEQAKVEQKKVDYEERRK 114
AS KEL R + DA+E KL E + + ++ KE E + + + + E +
Sbjct: 481 ASFEKELLREKEIVDAVE--KLAEEAKSELARLRVEKEEETLALERERTSIETEMEALAR 538
Query: 115 TLQEETKQHQMRAQYQDQLA--KKRYEEQLVQQQKSQEEILRKQEESVAKQEAL 166
E +Q Q A + +++ K+R++ Q + +EILR Q E ++ AL
Sbjct: 539 IRNELEEQLQSLASNKAEMSYEKERFDRLQKQVEDENQEILRLQNELEVERNAL 592
>At5g52410.1 68418.m06503 expressed protein
Length = 510
Score = 36.3 bits (80), Expect = 0.062
Identities = 31/114 (27%), Positives = 54/114 (47%), Gaps = 5/114 (4%)
Query: 56 ASAAKELERSRHAKDALELSKLQESTRQQEQMAKI-KEYEAAIEQAKVEQKKVDYEERRK 114
AS KEL R + DA+E KL E + + ++ KE E + + + + E +
Sbjct: 230 ASFEKELLREKEIVDAVE--KLAEEAKSELARLRVEKEEETLALERERTSIETEMEALAR 287
Query: 115 TLQEETKQHQMRAQYQDQLA--KKRYEEQLVQQQKSQEEILRKQEESVAKQEAL 166
E +Q Q A + +++ K+R++ Q + +EILR Q E ++ AL
Sbjct: 288 IRNELEEQLQSLASNKAEMSYEKERFDRLQKQVEDENQEILRLQNELEVERNAL 341
>At1g72250.1 68414.m08353 kinesin motor protein-related
Length = 1195
Score = 36.3 bits (80), Expect = 0.062
Identities = 22/94 (23%), Positives = 54/94 (57%), Gaps = 6/94 (6%)
Query: 58 AAKELERSRHAKDALELSKLQESTR-QQEQMAKIKEYEAAIEQAKVEQKKVDYEERRKTL 116
A K+L+ + K + K ++ + + EQ+ K++E +E AK++++ + + KTL
Sbjct: 822 AKKQLDNTELLKYKQMVEKWKQDMKGKDEQIRKMEETMYGLE-AKIKER----DTKNKTL 876
Query: 117 QEETKQHQMRAQYQDQLAKKRYEEQLVQQQKSQE 150
Q++ K+ + + + +LA++ + ++ +QQ Q+
Sbjct: 877 QDKVKELESQLLVERKLARQHVDTKIAEQQTKQQ 910
>At1g32530.1 68414.m04014 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger); weak similarity to
interaptin (GI:3549261) [Dictyostelium discoideum] weak
similarity to Axoneme-associated protein mst101(2)
(Swiss-Prot:Q08696) [Drosophila hydei]
Length = 711
Score = 36.3 bits (80), Expect = 0.062
Identities = 37/146 (25%), Positives = 73/146 (50%), Gaps = 15/146 (10%)
Query: 34 LSKSERKAME---AYRFDSSALERAASAAKELERSRHAKDALELSKLQ-ESTRQQEQMAK 89
L K ++A+E A RF +E A + +R+ LE + + R+ +++
Sbjct: 422 LLKKGKQAVEESTAKRFTDKEIE-LRKACSQNDRANVIVRKLENQNAEIRAEREGSKLSA 480
Query: 90 IKEYEAAIEQAKVEQK----KVDYEERRKTLQEE--TKQHQMRAQYQDQLAKKRYEEQLV 143
+ +A +E +K E+K V +E++ LQ+E ++ +++A Y+ YE+++
Sbjct: 481 SESLKACMEASKKEKKCLKKLVAWEKQILKLQDEITAEKEKIKALYKTLAQITEYEKEIE 540
Query: 144 ----QQQKSQEEILRKQEESVAKQEA 165
Q+QK++EE L + EE +EA
Sbjct: 541 AKWRQEQKAKEEALAQMEEEQRSKEA 566
>At5g62090.2 68418.m07793 expressed protein
Length = 816
Score = 35.9 bits (79), Expect = 0.081
Identities = 21/85 (24%), Positives = 45/85 (52%), Gaps = 5/85 (5%)
Query: 72 LELSKLQESTRQQEQMAKIKEYEAAIEQAKVEQKKVDYEERRKTLQEETKQHQMRAQYQD 131
L+ + + +QQ+Q + +++ ++Q K+ Q++ Y + LQ Q Q + Q Q
Sbjct: 200 LQRQDILQQQQQQQQQGQNPQFQILLQQQKLRQQQ-QYLQSLPPLQRVQLQQQQQVQQQQ 258
Query: 132 QLAKKRYEEQLVQQQKSQEEILRKQ 156
QL ++ + QQQ+ Q++ ++ Q
Sbjct: 259 QLQQQHQQ----QQQQLQQQGMQMQ 279
>At5g62090.1 68418.m07792 expressed protein
Length = 816
Score = 35.9 bits (79), Expect = 0.081
Identities = 21/85 (24%), Positives = 45/85 (52%), Gaps = 5/85 (5%)
Query: 72 LELSKLQESTRQQEQMAKIKEYEAAIEQAKVEQKKVDYEERRKTLQEETKQHQMRAQYQD 131
L+ + + +QQ+Q + +++ ++Q K+ Q++ Y + LQ Q Q + Q Q
Sbjct: 200 LQRQDILQQQQQQQQQGQNPQFQILLQQQKLRQQQ-QYLQSLPPLQRVQLQQQQQVQQQQ 258
Query: 132 QLAKKRYEEQLVQQQKSQEEILRKQ 156
QL ++ + QQQ+ Q++ ++ Q
Sbjct: 259 QLQQQHQQ----QQQQLQQQGMQMQ 279
>At5g41790.1 68418.m05088 COP1-interactive protein 1 / CIP1 almost
identical to CIP1 (GI:836950) [Arabidopsis thaliana]
Length = 1305
Score = 35.9 bits (79), Expect = 0.081
Identities = 33/137 (24%), Positives = 67/137 (48%), Gaps = 11/137 (8%)
Query: 52 LERAASAAKELERSRHAKDALELSKLQE--STRQQEQMAKIKEYEAAIEQAKVEQKKVDY 109
++ S +++L+ S K+ EL+ L++ T Q+E ++ E E ++ +EQ+ VD
Sbjct: 448 IQEHMSESEQLKESHGVKER-ELTGLRDIHETHQRESSTRLSELETQLKL--LEQRVVDL 504
Query: 110 EERRKTLQEETKQ-HQMRAQYQDQL--AKKRYEEQLVQQQKSQEEILRKQEE---SVAKQ 163
+EE K M + D+L A+ + +E + + +S++ + +K+ E V
Sbjct: 505 SASLNAAEEEKKSLSSMILEITDELKQAQSKVQELVTELAESKDTLTQKENELSSFVEVH 564
Query: 164 EALRRATIEHEMELREK 180
EA +R + EL +
Sbjct: 565 EAHKRDSSSQVKELEAR 581
Score = 31.5 bits (68), Expect = 1.8
Identities = 34/153 (22%), Positives = 74/153 (48%), Gaps = 16/153 (10%)
Query: 35 SKSERKAMEAYRFD-SSALERAASAAKELE------RSRHAKDALELSKLQESTRQQEQM 87
++ E KA+ + + LE+A + KEL + RH + ELS L +S QQ
Sbjct: 356 AEEENKAISSKNLEIMDKLEQAQNTIKELMDELGELKDRHKEKESELSSLVKSADQQ--- 412
Query: 88 AKIKEYEAAIEQAKVEQKKVDYEERRKTLQEETKQHQMRAQYQDQLAKKRYEEQLVQQQK 147
+ + + +++ A+ E+K + +R + E ++ Q Q +++ E V++++
Sbjct: 413 --VADMKQSLDNAEEEKKML--SQRILDISNEIQEAQKTIQEHMSESEQLKESHGVKERE 468
Query: 148 SQEEILRKQEESVAKQEALRRATIEHEMELREK 180
LR E+ ++ + R + +E +++L E+
Sbjct: 469 LTG--LRDIHETHQRESSTRLSELETQLKLLEQ 499
>At5g40340.1 68418.m04894 PWWP domain-containing protein KED,
Nicotiana tabacum, EMBL:AB009883
Length = 1008
Score = 35.9 bits (79), Expect = 0.081
Identities = 30/144 (20%), Positives = 64/144 (44%), Gaps = 2/144 (1%)
Query: 34 LSKSERKAMEAYRFDSSALERAASAAKELERSRHAKDALELSKLQESTRQQEQMAKIKEY 93
++K + K + + A E + +E E +H K E + + ++++ + +
Sbjct: 692 VTKGKEKKDKKGKAKQKAEEIEVTGKEENETDKHGKMKKERKRKKSESKKEGGEGEETQK 751
Query: 94 EAAIEQAKVEQKKVDYEERRKTLQEETKQHQMRAQYQDQLAKKRYEEQLVQQQKSQEEIL 153
EA E K E+K+ E ++++ EE Q + + + K++ E + + +EE
Sbjct: 752 EAN-ESTKKERKRKKSESKKQSDGEEETQKEPSESTKKE-RKRKNPESKKKAEAVEEEET 809
Query: 154 RKQEESVAKQEALRRATIEHEMEL 177
RK+ K+E R+ E E+
Sbjct: 810 RKESVESTKKERKRKKPKHDEEEV 833
Score = 31.1 bits (67), Expect = 2.3
Identities = 26/146 (17%), Positives = 60/146 (41%), Gaps = 4/146 (2%)
Query: 37 SERKAMEAYRFDSSALERAASAAKELERSRHAKDALELSKLQESTRQQEQMAKIKEYEAA 96
+ K + +Y E + K + + + KD + K ++ + E K +
Sbjct: 667 ANHKFLGSYDSSDKEKEELSEMGKPVTKGKEKKD--KKGKAKQKAEEIEVTGKEENETDK 724
Query: 97 IEQAKVEQKKVDYEERRKTLQEETKQHQMRAQYQDQLAKKRYEEQLVQQQKSQEEILRKQ 156
+ K E+K+ E +++ E ++ Q A + +KR + + +Q +EE ++
Sbjct: 725 HGKMKKERKRKKSESKKEG--GEGEETQKEANESTKKERKRKKSESKKQSDGEEETQKEP 782
Query: 157 EESVAKQEALRRATIEHEMELREKNK 182
ES K+ + + + E E+ +
Sbjct: 783 SESTKKERKRKNPESKKKAEAVEEEE 808
>At4g09940.1 68417.m01627 avirulence-responsive family protein /
avirulence induced gene (AIG1) family protein similar to
AIG1 protein SP:P54120 (Arabidopsis thaliana); contains
Pfam PF04548: AIG1 family;
Length = 394
Score = 35.9 bits (79), Expect = 0.081
Identities = 34/175 (19%), Positives = 76/175 (43%), Gaps = 11/175 (6%)
Query: 48 DSSALERAASAAKELERSRHAKDAL----ELSKLQESTRQQEQMAKIKEYEAA--IEQAK 101
D L R S A ++++ ++ L E+++L + + +I+E E A I+Q +
Sbjct: 204 DRKVLFRNRSNAPVSQKAKQVQELLNYVEEIARLNGKSYMADLSHEIRENETAFQIKQQE 263
Query: 102 VEQKKVDYEER-----RKTLQEETKQHQMRAQYQDQLAKKRYEEQLVQQQKSQEEILRKQ 156
+ + K Y + +K +++ + Q+R + + R ++ ++QQ +E+ R +
Sbjct: 264 ILEMKGLYTRQEMLQMKKDMEKSFENQQLRQMMERVETELRETKERLEQQLKEEKSARLE 323
Query: 157 EESVAKQEALRRATIEHEMELREKNKLXXXXXXXXXXXXXXXXNRDINLEQIRLK 211
E AK+ R + + E+ + +L ++N E R+K
Sbjct: 324 LEKRAKEVEKRSSDVVKELNDEQAKRLESESRAKEAVKQSNGVVENLNKELARIK 378
>At3g54670.1 68416.m06049 structural maintenance of chromosomes
(SMC) family protein similar to SMC1 protein [Bos
taurus] GI:4235253, 14S cohesin SMC1 subunit (SMC
protein) [Xenopus laevis] GI:3328231; contains Pfam
profiles PF02483: SMC family C-terminal domain, PF02463:
RecF/RecN/SMC N terminal domain
Length = 1257
Score = 35.9 bits (79), Expect = 0.081
Identities = 41/155 (26%), Positives = 74/155 (47%), Gaps = 12/155 (7%)
Query: 36 KSERKAM--EAYRFDSSALERAASAAKELER--SRHAKDALELSKLQESTRQQEQMAKIK 91
KS RK + E +F+ A +R AK L+ R K A + SKL + Q ++ + K
Sbjct: 256 KSNRKDVMRELEKFEREAGKRKVEQAKYLKEIAQREKKIAEKSSKLGKI---QPELLRFK 312
Query: 92 EYEAAIEQAKVEQKKVDYEERRKTLQEETKQ-HQMRAQYQDQLAKKRYEEQLVQQQKSQE 150
E A I+ AK+E + D ++R+K + +K+ QM+ ++ K + Q +
Sbjct: 313 EEIARIK-AKIETNRKDVDKRKKEKGKHSKEIEQMQKSIKELNKKMELFNKKRQDSSGKL 371
Query: 151 EILRKQEESV--AKQEA-LRRATIEHEMELREKNK 182
+L Q + K+EA ++ + E E+ E+ +
Sbjct: 372 PMLDSQLQDYFRLKEEAGMKTIKLRDEHEVLERQR 406
Score = 33.1 bits (72), Expect = 0.57
Identities = 28/106 (26%), Positives = 55/106 (51%), Gaps = 8/106 (7%)
Query: 59 AKELERSRHAKDALELSKLQESTRQQEQMAKIKEYEAAIEQAKVEQKKVDYEERRKTLQE 118
+K + R+ K E++KL++ R E + +I Y+ + V +V E + KT ++
Sbjct: 773 SKAIARTEVDKRKTEMNKLEK--RMNEIVDRI--YKDFSQSVGVPNIRVYEETQLKTAEK 828
Query: 119 ETKQHQMRAQYQDQLAKKRYEEQLVQQQKSQEEILRKQEESVAKQE 164
E ++ R + +QLAK +Y+ + +Q + +RK E S++ E
Sbjct: 829 EAEE---RLELSNQLAKLKYQLE-YEQNRDVGSRIRKIESSISSLE 870
>At3g47270.1 68416.m05135 hypothetical protein similar to At2g04970,
At2g15200, At1g32830, At2g14140, At3g30450, At4g03990,
At5g34895, At2g02200
Length = 671
Score = 35.9 bits (79), Expect = 0.081
Identities = 22/100 (22%), Positives = 50/100 (50%), Gaps = 1/100 (1%)
Query: 53 ERAASAAKELERSRHAKDALELSKLQESTRQQEQMAKIKEYEAAIEQAKVEQKKVDYEER 112
E+ KE E + E ++ QE +Q ++ + +E + E + E++KV+Y +
Sbjct: 347 EKQKEEGKEEEEEKVEYRGDEGTEKQEIPKQGDEEMEGEEEKQEEEGKEEEEEKVEYRDH 406
Query: 113 RKTLQ-EETKQHQMRAQYQDQLAKKRYEEQLVQQQKSQEE 151
T EET++ + Q +++ ++ +E+ V++ +E
Sbjct: 407 HSTCNVEETEKQENPKQGDEEMEREEGKEENVEEHDEHDE 446
Score = 31.9 bits (69), Expect = 1.3
Identities = 29/106 (27%), Positives = 52/106 (49%), Gaps = 7/106 (6%)
Query: 81 TRQQEQMAKIKEYEAAIEQAKVEQKKVDYEERRKTLQEETKQHQMRAQYQDQLAKKRYEE 140
+R+++ M+ ++ + E +V +KKV E +Q + Q ++ K++ EE
Sbjct: 248 SRKRKSMSFGEKVKLVYENCEVLKKKVGRLEGYLGIQRVPASYTREEQKEEDEKKEQEEE 307
Query: 141 QLVQQQKSQEEILRKQE----ESVAKQEALRRATIEHEMELREKNK 182
+ Q+++ +EE L K E E KQE ++ E E E EK K
Sbjct: 308 K--QEEEGKEEELEKVEYRGDERTEKQEIPKQGDEEMEGE-EEKQK 350
Score = 31.1 bits (67), Expect = 2.3
Identities = 33/137 (24%), Positives = 61/137 (44%), Gaps = 12/137 (8%)
Query: 56 ASAAKELERSRHAKDALELSKLQESTRQQEQMAKIKEYEAAIEQAKVE-QKKVDYE---E 111
AS +E ++ K E K QE ++E++ K+ EY K E K+ D E E
Sbjct: 288 ASYTREEQKEEDEKKEQEEEK-QEEEGKEEELEKV-EYRGDERTEKQEIPKQGDEEMEGE 345
Query: 112 RRKTLQEETKQHQMRAQY------QDQLAKKRYEEQLVQQQKSQEEILRKQEESVAKQEA 165
K +E ++ + + +Y + Q K+ +E++ +++ QEE +++EE +
Sbjct: 346 EEKQKEEGKEEEEEKVEYRGDEGTEKQEIPKQGDEEMEGEEEKQEEEGKEEEEEKVEYRD 405
Query: 166 LRRATIEHEMELREKNK 182
E E +E K
Sbjct: 406 HHSTCNVEETEKQENPK 422
>At3g29800.1 68416.m03792 AAA-type ATPase family contains Pfam
profile: ATPase family PF00004
Length = 440
Score = 35.9 bits (79), Expect = 0.081
Identities = 40/176 (22%), Positives = 81/176 (46%), Gaps = 20/176 (11%)
Query: 318 VVLAPNLEQRLRD---IAIATKN--TRLNKGFYRNLLMYGPPGTGKTLFSKKLAKHSGMD 372
+V+ +L++RL D + I+ ++ R+ + + R L++G PG GKT +AK+ D
Sbjct: 167 IVMKEDLKRRLIDDIDLFISKEDFYKRVGRHWMRYYLLHGLPGAGKTSLVAAIAKYLNFD 226
Query: 373 YAIMTGGDVAPMGKDAVAAIHKVFDWANTSRKGVLVFIDEADAFLRKRSSEKISEDLRAA 432
+T G D I +V D ++ +++ D L K++ L
Sbjct: 227 VYNITQG--VKTDFDTRRLIRRVED-------SSILLVEDIDTSL---EGSKVA--LSQL 272
Query: 433 LNAFLYRTSDQSSRIMLVLASNTPQQFDSAINDRLDKMIEFGLPALEERERLIRLY 488
L++ + S+ +R+ ++ +N ++FD + R++ I G E+ + L Y
Sbjct: 273 LSSLTWPWSNGKARV-VIFTTNNKERFDQTLLCRMEMKIYMGHCCFEDFKTLASNY 327
>At3g12190.1 68416.m01520 hypothetical protein
Length = 269
Score = 35.9 bits (79), Expect = 0.081
Identities = 37/147 (25%), Positives = 71/147 (48%), Gaps = 14/147 (9%)
Query: 36 KSERKAMEAYRFDSSALERAASAAKELERSRHAKDALELSKLQESTRQQEQMAKI----- 90
K E ++ E RF L R EL+R+R +AL+ + ++ + ++M++
Sbjct: 107 KREIESEEKKRFLVQKLNRERKF--ELKRTREQVEALQKNDMKLDVKHSKEMSEELLVQQ 164
Query: 91 KEYEAAIEQAKVEQKKVDYEERRKTLQEETKQHQMRAQYQDQLAKKRYEEQLVQQQKSQE 150
++YE +++ K+E+KK+ R L+E ++ KR EE L ++K
Sbjct: 165 EKYEEILKKKKLEEKKLKDCTRDLALREGD------LRWVSMRMTKRCEE-LRWEKKKNL 217
Query: 151 EILRKQEESVAKQEALRRATIEHEMEL 177
+ ++ EE+ K + L RA E + E+
Sbjct: 218 VLCKRNEEAERKLKHLNRALEEKQKEV 244
Score = 31.9 bits (69), Expect = 1.3
Identities = 24/98 (24%), Positives = 47/98 (47%), Gaps = 2/98 (2%)
Query: 83 QQEQMAKIKEYEAAIEQAKVEQKKVDYEER--RKTLQEETKQHQMRAQYQDQLAKKRYEE 140
+Q ++ ++K + E+ + +K++ E + K +E+ + Q D K E
Sbjct: 99 KQRKLDRLKREIESEEKKRFLVQKLNRERKFELKRTREQVEALQKNDMKLDVKHSKEMSE 158
Query: 141 QLVQQQKSQEEILRKQEESVAKQEALRRATIEHEMELR 178
+L+ QQ+ EEIL+K++ K + R E +LR
Sbjct: 159 ELLVQQEKYEEILKKKKLEEKKLKDCTRDLALREGDLR 196
>At3g10180.1 68416.m01219 kinesin motor protein-related similar to
centromere protein E GB:4502781 [Homo sapiens]
Length = 1348
Score = 35.9 bits (79), Expect = 0.081
Identities = 38/164 (23%), Positives = 65/164 (39%), Gaps = 5/164 (3%)
Query: 62 LERSRHAKDALELSKLQESTRQQEQMAKIKEYEAAIEQAKVEQKKVDYEERRKTLQEETK 121
L S AK+ L K E T+ + + + K + ++ K+E +K E K L +
Sbjct: 810 LSSSSLAKEKENLRKDFEKTKTKLKDTESKLKNSMQDKTKLEAEKASAERELKRLHSQKA 869
Query: 122 QHQMRAQYQDQLAKKRYEEQLVQQ---QKSQEEILRKQEESVAKQEALRRATIEHEMELR 178
+ Q+ A KR + LV++ Q QEE KQ E +A + A++E E+
Sbjct: 870 LLERDISKQESFAGKRRDSLLVERSANQSLQEEF--KQLEVLAFEMETTIASLEEELAAE 927
Query: 179 EKNKLXXXXXXXXXXXXXXXXNRDINLEQIRLKAAENRVTILES 222
K + +L+ +N VT L++
Sbjct: 928 RGEKEEALCRNDGLGSEITDLTEKLEHSNTKLEHLQNDVTELKT 971
>At2g34730.1 68415.m04265 myosin heavy chain-related low similarity
to SP|P14105 Myosin heavy chain, nonmuscle (Cellular
myosin heavy chain) {Gallus gallus}
Length = 825
Score = 35.9 bits (79), Expect = 0.081
Identities = 23/94 (24%), Positives = 48/94 (51%), Gaps = 2/94 (2%)
Query: 63 ERSRHAKDALELSKLQESTRQQEQMAKIKEYEAAIEQAKVEQKKVDYEERRKTLQEETKQ 122
ER + + +++ LQ +QE + K ++ A+ +K YE + +L+EE +
Sbjct: 604 ERKKIEVVSQQINDLQSQVERQETEIQDKIEALSVVSARELEKVKGYETKISSLREELE- 662
Query: 123 HQMRAQYQDQLAKKRYEEQLVQQQKSQEEILRKQ 156
R ++ +KR E+ + + K+++E L+KQ
Sbjct: 663 -LARESLKEMKDEKRKTEEKLSETKAEKETLKKQ 695
>At2g06210.2 68415.m00683 phosphoprotein-related low similarity to
phosphoprotein from Mus musculus GI:1236239; contains
Pfam profile PF00515 TPR Domain
Length = 852
Score = 35.9 bits (79), Expect = 0.081
Identities = 21/77 (27%), Positives = 40/77 (51%), Gaps = 1/77 (1%)
Query: 66 RHAKDALELSKLQESTRQQEQMAKIKEYEAAIEQAKVEQKKVDYEERRKTLQEETKQ-HQ 124
++ LE +K+ +QE++ + E A + A E+ + EE+RK E+ KQ +
Sbjct: 610 QYCSHLLEAAKVHREAAEQEELQNRQRLEVARQAALAEEARRKAEEQRKYQLEKRKQEEE 669
Query: 125 MRAQYQDQLAKKRYEEQ 141
+R Q++ +R +EQ
Sbjct: 670 LRRLKQEEEKFQRIKEQ 686
>At2g06210.1 68415.m00684 phosphoprotein-related low similarity to
phosphoprotein from Mus musculus GI:1236239; contains
Pfam profile PF00515 TPR Domain
Length = 1064
Score = 35.9 bits (79), Expect = 0.081
Identities = 21/77 (27%), Positives = 40/77 (51%), Gaps = 1/77 (1%)
Query: 66 RHAKDALELSKLQESTRQQEQMAKIKEYEAAIEQAKVEQKKVDYEERRKTLQEETKQ-HQ 124
++ LE +K+ +QE++ + E A + A E+ + EE+RK E+ KQ +
Sbjct: 822 QYCSHLLEAAKVHREAAEQEELQNRQRLEVARQAALAEEARRKAEEQRKYQLEKRKQEEE 881
Query: 125 MRAQYQDQLAKKRYEEQ 141
+R Q++ +R +EQ
Sbjct: 882 LRRLKQEEEKFQRIKEQ 898
>At1g67230.1 68414.m07652 expressed protein
Length = 1132
Score = 35.9 bits (79), Expect = 0.081
Identities = 24/120 (20%), Positives = 60/120 (50%), Gaps = 1/120 (0%)
Query: 61 ELERSRHAKDALELSKLQESTRQQEQMAKIKEYEAAIEQAKVEQKKVDYEERRKTLQEET 120
E ERS + + EL + E R Q+++ + + + ++ E++ + +ER+ + E
Sbjct: 480 EEERSEYLRLQTELKEQIEKCRSQQELLQKEAEDLKAQRESFEKEWEELDERKAKIGNEL 539
Query: 121 KQHQMRAQYQDQLAKKRYEEQLVQQQKSQEEILRKQEESVAKQEALRRATIEHEMELREK 180
K + + ++ EE+L +++++ E + ++ E++ +A T+E+E + K
Sbjct: 540 KNITDQKEKLERHIHLE-EERLKKEKQAANENMERELETLEVAKASFAETMEYERSMLSK 598
Score = 33.9 bits (74), Expect = 0.33
Identities = 37/155 (23%), Positives = 73/155 (47%), Gaps = 12/155 (7%)
Query: 34 LSKSERKAMEAYRFDSSALERA-ASAAKELERSRHAKDALELSKLQESTRQQEQMAKIKE 92
L K ++ A E + LE A AS A+ +E R LSK ES R Q + I+
Sbjct: 560 LKKEKQAANENMERELETLEVAKASFAETMEYERSM-----LSKKAESERSQ-LLHDIEM 613
Query: 93 YEAAIE---QAKVEQKKVDYEERRKTLQEETKQHQMRAQYQDQLAKKRYEEQLVQQQKSQ 149
+ +E Q +E+K+ + + ++K +EE ++ Y +A++ + ++Q+ +
Sbjct: 614 RKRKLESDMQTILEEKERELQAKKKLFEEEREKELSNINYLRDVARREMMDMQNERQRIE 673
Query: 150 EEILR--KQEESVAKQEALRRATIEHEMELREKNK 182
+E L + + +Q+ R ++ + L +K K
Sbjct: 674 KEKLEVDSSKNHLEEQQTEIRKDVDDLVALTKKLK 708
Score = 33.1 bits (72), Expect = 0.57
Identities = 37/139 (26%), Positives = 68/139 (48%), Gaps = 18/139 (12%)
Query: 40 KAMEAYRFDSSALERAASAAKELERSRHAKDALELSK---LQESTRQQEQMAKIKEYEAA 96
+++E + A RA A K E SR + D +K +ES+ Q+E+ + I E EA
Sbjct: 163 RSVEEKSLEVEAKLRAVDA-KLAEVSRKSSDVERKAKEVEARESSLQRERFSYIAEREA- 220
Query: 97 IEQAKVEQKKVDYEERRKTLQEE----------TKQHQMRAQYQDQLAKKRYEEQLVQQQ 146
++A + +++ D E + LQE KQ + RA D++ K++ +E Q+
Sbjct: 221 -DEATLSKQREDLREWERKLQEGEERVAKSQMIVKQREDRANESDKIIKQKGKELEEAQK 279
Query: 147 K--SQEEILRKQEESVAKQ 163
K + ++K E+ V+ +
Sbjct: 280 KIDAANLAVKKLEDDVSSR 298
Score = 31.5 bits (68), Expect = 1.8
Identities = 30/133 (22%), Positives = 58/133 (43%), Gaps = 4/133 (3%)
Query: 51 ALERAASAAKELERSRHAKDALELSKLQESTRQQEQMAKIKEYEAAIEQAKVEQKKVDYE 110
AL S + + S K+ EL +E + E + E + IE+ + +Q+ + E
Sbjct: 453 ALVEKVSGENQAQLSEINKEKDELRVTEEE--RSEYLRLQTELKEQIEKCRSQQELLQKE 510
Query: 111 ERRKTLQEETKQHQMRAQYQDQLAKKRYEEQLVQQQKSQ-EEILRKQEESVAKQEALRRA 169
Q E+ + + + ++ AK E + + QK + E + +EE + K++
Sbjct: 511 AEDLKAQRESFEKEWE-ELDERKAKIGNELKNITDQKEKLERHIHLEEERLKKEKQAANE 569
Query: 170 TIEHEMELREKNK 182
+E E+E E K
Sbjct: 570 NMERELETLEVAK 582
Score = 30.7 bits (66), Expect = 3.1
Identities = 33/162 (20%), Positives = 69/162 (42%), Gaps = 12/162 (7%)
Query: 33 NLSKSERKAMEAYRFDSSALERAASAAKELERSRHA---KDALELSKLQESTRQQ----- 84
N K E + E R + L+ E RS+ K+A +L +ES ++
Sbjct: 470 NKEKDELRVTEEERSEYLRLQTELKEQIEKCRSQQELLQKEAEDLKAQRESFEKEWEELD 529
Query: 85 EQMAKI-KEYEAAIEQAKVEQKKVDYEERRKTLQEETKQHQMRAQYQD-QLAKKRYEEQL 142
E+ AKI E + +Q + ++ + EE R +++ M + + ++AK + E +
Sbjct: 530 ERKAKIGNELKNITDQKEKLERHIHLEEERLKKEKQAANENMERELETLEVAKASFAETM 589
Query: 143 VQQQKSQEEILRKQEESVAKQEALRRATIEHEME--LREKNK 182
++ + + + +R+ +E +M+ L EK +
Sbjct: 590 EYERSMLSKKAESERSQLLHDIEMRKRKLESDMQTILEEKER 631
>At1g20970.1 68414.m02625 adhesin-related contains TIGRFAM TIGR01612:
reticulocyte binding protein; contains TIGRFAM TIGR00864:
polycystin cation channel protein; similar to
fimbriae-associated protein Fap1 [Streptococcus
parasanguinis] (GI:3929312)
Length = 1498
Score = 35.9 bits (79), Expect = 0.081
Identities = 26/86 (30%), Positives = 48/86 (55%), Gaps = 6/86 (6%)
Query: 52 LERAASAAKELERSRHAKDALELSKLQESTRQQEQMAKIKEYEAAIEQAKVEQKKVDYEE 111
+E++A+ +E E + K+ EL K +E R+Q++ AK+KE E AK ++ E
Sbjct: 1197 IEKSATPEEE-EPPKLTKEEEELIKKEEEKRKQKEAAKMKEQHRLEEIAKAKEAM----E 1251
Query: 112 RRKTLQEETKQHQ-MRAQYQDQLAKK 136
R+K +E+ K ++AQ + + +K
Sbjct: 1252 RKKKREEKAKARAVLKAQKEAEEREK 1277
Score = 29.1 bits (62), Expect = 9.4
Identities = 31/136 (22%), Positives = 59/136 (43%), Gaps = 8/136 (5%)
Query: 48 DSSALERAASAAKE----LERSRHAKDALELSKLQESTRQQEQMAKIKEYEAAIEQAKVE 103
D + A A KE E S+ + E++K T Q+ Q K K+ + +
Sbjct: 1131 DRAEKHEAVPAQKEKVVKFEGSKVENNGKEVAK---PTEQKSQTTKSKKAVKPDQPPSIV 1187
Query: 104 QKKVD-YEERRKTLQEETKQHQMRAQYQDQLAKKRYEEQLVQQQKSQEEILRKQEESVAK 162
+ V EE K+ E ++ + +++L KK E++ ++ +E R +E + AK
Sbjct: 1188 TELVSGKEEIEKSATPEEEEPPKLTKEEEELIKKEEEKRKQKEAAKMKEQHRLEEIAKAK 1247
Query: 163 QEALRRATIEHEMELR 178
+ R+ E + + R
Sbjct: 1248 EAMERKKKREEKAKAR 1263
>At1g03830.1 68414.m00364 guanylate-binding family protein contains
Pfam domains PF02263: Guanylate-binding protein,
N-terminal domain and PF02841: Guanylate-binding
protein, C-terminal domain
Length = 991
Score = 35.9 bits (79), Expect = 0.081
Identities = 38/158 (24%), Positives = 71/158 (44%), Gaps = 11/158 (6%)
Query: 24 GVGVAAPSTNLSKSERKAMEAYRFDSSALERAAS-AAKELERSRHAKDALELSKLQESTR 82
G G A+ S L S + EA R + + L+ E++R++ + LE L+
Sbjct: 724 GEGEASASKKLVDSMKMEAEASRKNENKLQTLLEDKCIEIDRAKSRIEGLERDCLKLKYA 783
Query: 83 QQEQMAKIKEYEAA----IEQAKVEQKKVDYEERRKTLQEETKQHQMRAQYQDQLAKKRY 138
+ E A +KE ++ +E A+ +KK+ + KT++ + + Q+ A + K
Sbjct: 784 ESEA-ATVKELVSSMKMEVESARSNEKKLQLSLQEKTIEIDRAKGQIEAL---ERQKMEL 839
Query: 139 EEQLVQQQKSQEEILRKQEE--SVAKQEALRRATIEHE 174
E L + K EE + K + + K + +R +E E
Sbjct: 840 SETLETRAKQNEEEVTKWQRIINAEKSKNIRENLMEKE 877
>At5g67320.1 68418.m08490 WD-40 repeat family protein strong
similarity to unknown protein (ref|NP_005638.1)
Length = 613
Score = 35.5 bits (78), Expect = 0.11
Identities = 27/116 (23%), Positives = 59/116 (50%), Gaps = 5/116 (4%)
Query: 60 KELERSRHAKDALELSKLQESTRQQEQMAKIKEYEAAIEQAKVEQKKV---DYEERRKTL 116
KE +RS+ +E + R +E+ K+ E E+ K+E++K + ER K
Sbjct: 110 KERDRSKENDKGVEREHEGDRNRAKEKDRHEKQKEREREREKLEREKEREREKIEREKER 169
Query: 117 QEETKQHQMRAQYQDQLAKKRYEEQLVQQQKSQEEILRKQEESVAKQEALRRATIE 172
+ E + ++ + +D+L K +E+ +++++ +E+I R++ +A R I+
Sbjct: 170 EREKMEREIFEREKDRL--KLEKEREIEREREREKIEREKSHEKQLGDADREMVID 223
>At5g40450.1 68418.m04905 expressed protein
Length = 2910
Score = 35.5 bits (78), Expect = 0.11
Identities = 36/145 (24%), Positives = 63/145 (43%), Gaps = 9/145 (6%)
Query: 48 DSSALERAASAAKELE-----RSRHAKDALELSKLQESTRQQEQMAKIKEYEA--AIEQA 100
D S +A E+E S H + E L+ + ++ KI E + AIE+A
Sbjct: 498 DESIEVKAKETGPEIETAVDGESVHEIETTERVLLEAEKEEDKEEIKIDEEPSLNAIEKA 557
Query: 101 KVEQKKVDYEERRKTLQEETKQHQMRAQYQDQLAKKRYEEQLVQQQKSQE-EILRKQEES 159
+ E K+ EE EET H+ + ++ + + +Q S+E + R +EE
Sbjct: 558 ETENVKIVIEEPEIVNNEETSVHESESLKENAEPVEAVKNSDGTEQISREVTVDRAKEED 617
Query: 160 VA-KQEALRRATIEHEMELREKNKL 183
+A K E ++ E + L K ++
Sbjct: 618 IAPKTEEIQERPSESKASLEPKEEV 642
Score = 30.3 bits (65), Expect = 4.0
Identities = 31/134 (23%), Positives = 60/134 (44%), Gaps = 5/134 (3%)
Query: 48 DSSALERAASAAKELERSRHAKDALELSK-LQESTRQQEQMAKIK-EYEA---AIEQAKV 102
++ AL +A +E + + D +E +K + R++E+ A++K + E AIE+ ++
Sbjct: 1162 ETYALHSVEAAEEETATNGESLDDVETTKSVLLEVRKEEEEAEMKTDAEPRLDAIEKEEL 1221
Query: 103 EQKKVDYEERRKTLQEETKQHQMRAQYQDQLAKKRYEEQLVQQQKSQEEILRKQEESVAK 162
E K ++ + EET H+ + D +K E Q E + ++ +
Sbjct: 1222 ETVKTVVQDAKIVNNEETTAHESESLKGDNHQEKNAEPVEATQNLDDAEQISREVTVDTE 1281
Query: 163 QEALRRATIEHEME 176
+EA IE E
Sbjct: 1282 READITEKIEKVQE 1295
Score = 29.9 bits (64), Expect = 5.4
Identities = 18/97 (18%), Positives = 47/97 (48%), Gaps = 4/97 (4%)
Query: 73 ELSKLQESTRQQEQMAKIKE---YEAAIEQAKVEQKKVDYEERRKTLQEETKQHQMRAQY 129
E S ++E + A++++ +E ++E+ + +D+E ++ QEE KQ + +
Sbjct: 2657 ETSSIEEKREVEHVKAEMEDAIKHEVSVEEKNNTSENIDHEAAKEIEQEEGKQTNI-VKE 2715
Query: 130 QDQLAKKRYEEQLVQQQKSQEEILRKQEESVAKQEAL 166
+ + +K ++ K ++ + K + + E+L
Sbjct: 2716 EIREEEKEINQESFNNVKETDDAIDKTQPEIRDIESL 2752
>At5g27230.1 68418.m03248 expressed protein ; expression supported
by MPSS
Length = 948
Score = 35.5 bits (78), Expect = 0.11
Identities = 38/150 (25%), Positives = 68/150 (45%), Gaps = 15/150 (10%)
Query: 39 RKAMEAYRFDSSALERAASAAKELE------RSRHAKDALELSKLQESTRQQEQMAKIKE 92
RK +E+ + + +L KE+E RS + A EL L+ES + + + KE
Sbjct: 19 RKTLESLQEGAHSLLLLTIQWKEIESYFDSTRSVLEERAKELEALEESIKVKALELEKKE 78
Query: 93 YEAAIEQAKVEQKKVDYEERRKTLQEETKQHQMRAQYQDQLAKKRYEEQLVQQQKSQEEI 152
E + ++ K+ ++E++ K E K + +KR EQL + E +
Sbjct: 79 KELCLIDESMKAKQSEFEKKEKDFDLEQKAEVEK--------RKREVEQLEKFTTRMESV 130
Query: 153 LRKQEESVAKQEALRRATIEHEMELREKNK 182
R +E + + LR +E +ME EK++
Sbjct: 131 ERVSDEKLMEL-GLRATELELKMEEVEKHR 159
>At5g20730.3 68418.m02464 auxin-responsive factor (ARF7) identical
to auxin response factor 7 GI:4104929 from [Arabidopsis
thaliana]
Length = 1150
Score = 35.5 bits (78), Expect = 0.11
Identities = 17/89 (19%), Positives = 48/89 (53%), Gaps = 2/89 (2%)
Query: 57 SAAKELERSRHAKDALELSKLQESTRQQEQMAKIKEYEAAIEQAKVEQKKVDYEERRKTL 116
S ++L++ H+ +L + Q ++QQ+Q ++ + + ++ + ++++ L
Sbjct: 501 SQQQQLQQLLHS--SLNHQQQQSQSQQQQQQQQLLQQQQQLQSQQHSNNNQSQSQQQQQL 558
Query: 117 QEETKQHQMRAQYQDQLAKKRYEEQLVQQ 145
++ +Q Q++ Q+Q L ++ ++QL Q
Sbjct: 559 LQQQQQQQLQQQHQQPLQQQTQQQQLRTQ 587
Score = 31.1 bits (67), Expect = 2.3
Identities = 17/82 (20%), Positives = 47/82 (57%), Gaps = 5/82 (6%)
Query: 83 QQEQMAKIKEYEAAIEQAKVEQKKVDYEERRKTLQEETKQHQMRAQYQDQLAKKRYEEQL 142
QQ+Q+ ++ +Q +Q + +++++ L ++ +Q Q + + ++ + ++QL
Sbjct: 502 QQQQLQQLLHSSLNHQQ---QQSQSQQQQQQQQLLQQQQQLQSQQHSNNNQSQSQQQQQL 558
Query: 143 VQQQKSQEEILRKQEESVAKQE 164
+QQQ+ Q+ L++Q + +Q+
Sbjct: 559 LQQQQQQQ--LQQQHQQPLQQQ 578
>At5g20730.2 68418.m02463 auxin-responsive factor (ARF7) identical
to auxin response factor 7 GI:4104929 from [Arabidopsis
thaliana]
Length = 1164
Score = 35.5 bits (78), Expect = 0.11
Identities = 17/89 (19%), Positives = 48/89 (53%), Gaps = 2/89 (2%)
Query: 57 SAAKELERSRHAKDALELSKLQESTRQQEQMAKIKEYEAAIEQAKVEQKKVDYEERRKTL 116
S ++L++ H+ +L + Q ++QQ+Q ++ + + ++ + ++++ L
Sbjct: 500 SQQQQLQQLLHS--SLNHQQQQSQSQQQQQQQQLLQQQQQLQSQQHSNNNQSQSQQQQQL 557
Query: 117 QEETKQHQMRAQYQDQLAKKRYEEQLVQQ 145
++ +Q Q++ Q+Q L ++ ++QL Q
Sbjct: 558 LQQQQQQQLQQQHQQPLQQQTQQQQLRTQ 586
Score = 31.1 bits (67), Expect = 2.3
Identities = 17/82 (20%), Positives = 47/82 (57%), Gaps = 5/82 (6%)
Query: 83 QQEQMAKIKEYEAAIEQAKVEQKKVDYEERRKTLQEETKQHQMRAQYQDQLAKKRYEEQL 142
QQ+Q+ ++ +Q +Q + +++++ L ++ +Q Q + + ++ + ++QL
Sbjct: 501 QQQQLQQLLHSSLNHQQ---QQSQSQQQQQQQQLLQQQQQLQSQQHSNNNQSQSQQQQQL 557
Query: 143 VQQQKSQEEILRKQEESVAKQE 164
+QQQ+ Q+ L++Q + +Q+
Sbjct: 558 LQQQQQQQ--LQQQHQQPLQQQ 577
>At5g20730.1 68418.m02462 auxin-responsive factor (ARF7) identical
to auxin response factor 7 GI:4104929 from [Arabidopsis
thaliana]
Length = 1165
Score = 35.5 bits (78), Expect = 0.11
Identities = 17/89 (19%), Positives = 48/89 (53%), Gaps = 2/89 (2%)
Query: 57 SAAKELERSRHAKDALELSKLQESTRQQEQMAKIKEYEAAIEQAKVEQKKVDYEERRKTL 116
S ++L++ H+ +L + Q ++QQ+Q ++ + + ++ + ++++ L
Sbjct: 501 SQQQQLQQLLHS--SLNHQQQQSQSQQQQQQQQLLQQQQQLQSQQHSNNNQSQSQQQQQL 558
Query: 117 QEETKQHQMRAQYQDQLAKKRYEEQLVQQ 145
++ +Q Q++ Q+Q L ++ ++QL Q
Sbjct: 559 LQQQQQQQLQQQHQQPLQQQTQQQQLRTQ 587
Score = 31.1 bits (67), Expect = 2.3
Identities = 17/82 (20%), Positives = 47/82 (57%), Gaps = 5/82 (6%)
Query: 83 QQEQMAKIKEYEAAIEQAKVEQKKVDYEERRKTLQEETKQHQMRAQYQDQLAKKRYEEQL 142
QQ+Q+ ++ +Q +Q + +++++ L ++ +Q Q + + ++ + ++QL
Sbjct: 502 QQQQLQQLLHSSLNHQQ---QQSQSQQQQQQQQLLQQQQQLQSQQHSNNNQSQSQQQQQL 558
Query: 143 VQQQKSQEEILRKQEESVAKQE 164
+QQQ+ Q+ L++Q + +Q+
Sbjct: 559 LQQQQQQQ--LQQQHQQPLQQQ 578
>At4g03580.1 68417.m00493 hypothetical protein
Length = 228
Score = 35.5 bits (78), Expect = 0.11
Identities = 20/64 (31%), Positives = 38/64 (59%), Gaps = 4/64 (6%)
Query: 69 KDALELSKLQESTRQQEQMAKIKEYEAAIEQAKVEQKKVDYEERRKTLQEETKQHQMRAQ 128
KD+L+ K +E ++E + K+K+ + + + ++K ++E R+K Q++ Q Q R Q
Sbjct: 15 KDSLQKKKNEEQEEEEEDVKKLKQIK---QPNPLNEQKREHEARQKREQDQADQGQGR-Q 70
Query: 129 YQDQ 132
YQ Q
Sbjct: 71 YQAQ 74
>At3g52860.1 68416.m05825 expressed protein
Length = 156
Score = 35.5 bits (78), Expect = 0.11
Identities = 25/98 (25%), Positives = 49/98 (50%), Gaps = 6/98 (6%)
Query: 51 ALERAASAAKELERSRHAKDALELSKLQESTRQQEQMAKIKEYEAAIEQAKVEQKKVD-Y 109
A++R+ + +++ RHA+D +E +K + Q +K + A +A+ +K +
Sbjct: 63 AIDRSPHPSHQIDVERHARDFMEAAK-----KLQLYFMGLKREDRAPSRAESLKKDIAVM 117
Query: 110 EERRKTLQEETKQHQMRAQYQDQLAKKRYEEQLVQQQK 147
EE KT E K+H Q +L K++ E+ + +K
Sbjct: 118 EEELKTKDELIKKHMRLFQESQKLVKEQIEKHRDELEK 155
>At3g25690.1 68416.m03197 hydroxyproline-rich glycoprotein family
protein Common family members: At4g18570, At4g04980,
At5g61090 [Arabidopsis thaliana]; identical to cDNA
CHUP1 for actin binding protein GI:28071264
Length = 1004
Score = 35.5 bits (78), Expect = 0.11
Identities = 49/211 (23%), Positives = 89/211 (42%), Gaps = 21/211 (9%)
Query: 33 NLSKSE--RKAMEAYRFDSSALERAASAAKELERSRHAKDALELSKLQESTRQQEQMAKI 90
NL K+E RK ++ LER KELE R K EL + Q+ + ++
Sbjct: 110 NLEKAEKERKYEVEMAYNDGELERLKQLVKELE-EREVKLEGELLEYYGLKEQESDIVEL 168
Query: 91 KEYEAAIEQAKVEQKKV---DYEERRKTLQEETKQHQMRAQYQDQLAKKRYEE-----QL 142
+ + I+ +++ + + RK LQEE Q+ + + + ++A+ + +E QL
Sbjct: 169 QR-QLKIKTVEIDMLNITINSLQAERKKLQEELSQNGI-VRKELEVARNKIKELQRQIQL 226
Query: 143 VQQQKSQEEILRKQEESVAKQEALRRATIEHEMELREKNKLXXXXXXXXXXXXXXXXNRD 202
Q + +L KQ S + + + E+E KL NR+
Sbjct: 227 DANQTKGQLLLLKQHVSSLQMKEEEAMNKDTEVE----RKLKAVQDLEVQVMELKRKNRE 282
Query: 203 INLEQ----IRLKAAENRVTILESIKTAGSV 229
+ E+ I+L +AE R+ L ++ + V
Sbjct: 283 LQHEKRELSIKLDSAEARIATLSNMTESDKV 313
>At3g04960.1 68416.m00538 expressed protein low similarity to
SP|P32380 NUF1 protein (Spindle poly body spacer protein
SPC110) {Saccharomyces cerevisiae}
Length = 556
Score = 35.5 bits (78), Expect = 0.11
Identities = 33/136 (24%), Positives = 67/136 (49%), Gaps = 5/136 (3%)
Query: 32 TNLSKSERKAMEAYRFDSSALERAASAAKELERSRHAKDALELSKLQESTRQQEQMAKIK 91
T S+ RK E LE + + L + K ++EL K +E Q + A +
Sbjct: 182 TTESERMRKETELMETSLKQLEARENELRLLNETIQGK-SMELEK-KEVNFQLKHEAAAR 239
Query: 92 EYEAAIEQAKVEQKKVDYEERRKTLQEETKQH-QMRAQYQDQLAKKRYEEQL-VQQQKSQ 149
E E + ++++KK++ E+ L++ K+ +RA+ + + ++ YE L ++ +
Sbjct: 240 ETEVKNKFLELKEKKLEEREQHLELKQRKKEKPAIRAETRKR-SRLEYESPLSAEKGRYA 298
Query: 150 EEILRKQEESVAKQEA 165
E ++R ++ V K+EA
Sbjct: 299 ETLIRPGKKQVQKREA 314
Score = 32.7 bits (71), Expect = 0.76
Identities = 27/117 (23%), Positives = 59/117 (50%), Gaps = 10/117 (8%)
Query: 61 ELERSRHAKDALELSKLQESTRQQEQMAKIKEYEAAIEQAKVEQKKVDYEERRKTLQEET 120
E ER R + +E S Q R+ E + + + ++E+K+V+++ + + ET
Sbjct: 184 ESERMRKETELMETSLKQLEARENELRLLNETIQG--KSMELEKKEVNFQLKHEAAARET 241
Query: 121 KQHQMRAQYQDQLAKKRYEEQLVQQQKSQEEILRKQEESVAKQEALRRATIEHEMEL 177
+++ ++ +L +K+ EE+ + Q RK+E+ + E +R+ +E+E L
Sbjct: 242 ---EVKNKFL-ELKEKKLEEREQHLELKQ----RKKEKPAIRAETRKRSRLEYESPL 290
>At1g80810.1 68414.m09481 expressed protein similar to
androgen-induced prostate proliferative shutoff
associated protein (GI:4559410) [Homo sapiens]; similar
to bimD (GI:168025) [Emericella nidulans]
Length = 826
Score = 35.5 bits (78), Expect = 0.11
Identities = 30/132 (22%), Positives = 63/132 (47%), Gaps = 6/132 (4%)
Query: 55 AASAAKELERSRHAKDA-LELSKLQESTRQQEQMAKIKEYEAAIEQAKVEQK---KVDYE 110
++S + R+ KD L+K E TR+ + + +KE A ++ EQ+ + + +
Sbjct: 653 SSSGVRSSSRTLMKKDCGKRLNKQVEKTREGKNLRSLKELNAETDRTAEEQEVSLEAESD 712
Query: 111 ERRKTLQEETKQHQMRAQYQDQLAKKRYEEQLVQQQKSQEEILRKQEESVAKQEALRRAT 170
+R + + E + Q QD+ + +E+ Q S+ E + E+S +++E R T
Sbjct: 713 DRSEEQEYEDDCSDKKEQSQDKGVEAETKEEEKQYPNSEGE--SEGEDSESEEEPKWRET 770
Query: 171 IEHEMELREKNK 182
+ E + E+ +
Sbjct: 771 DDMEDDEEEEEE 782
>At1g68790.1 68414.m07863 expressed protein
Length = 1085
Score = 35.5 bits (78), Expect = 0.11
Identities = 26/123 (21%), Positives = 62/123 (50%), Gaps = 4/123 (3%)
Query: 60 KELERSRHAKDALELSKLQESTRQQEQMAKIKEYEAAIEQAKVEQKKVDYEERRKTLQEE 119
++ E R KD +E E+T+Q+ ++ + E ++ +VE ++ E ++ + +
Sbjct: 454 EDKECLRKLKDEIEEIGT-ETTKQESRIREEHESLRITKEERVEFLRLQ-SELKQQIDKV 511
Query: 120 TKQHQMRAQYQDQLA--KKRYEEQLVQQQKSQEEILRKQEESVAKQEALRRATIEHEMEL 177
++ ++ + +++L K+R+E++ K + I R+Q E + E LR I + L
Sbjct: 512 KQEEELLLKEREELKQDKERFEKEWEALDKKRANITREQNEVAEENEKLRNLQISEKHRL 571
Query: 178 REK 180
+ +
Sbjct: 572 KRE 574
Score = 31.9 bits (69), Expect = 1.3
Identities = 25/94 (26%), Positives = 50/94 (53%), Gaps = 14/94 (14%)
Query: 73 ELSKLQESTRQQEQM--AKIKEYEAAIEQAKVEQKKVDYEERRKTLQEETKQHQMRAQYQ 130
EL + +E+ ++EQM K+ + + A+ ++ + +++ E+ R++L EE +
Sbjct: 333 ELHEFEENLIEREQMEIGKLLDDQKAVLDSRRREFEMELEQMRRSLDEELE--------- 383
Query: 131 DQLAKKRYEEQLVQQQKSQEEILRKQEESVAKQE 164
KK EQL + +EE L K+E ++ K+E
Sbjct: 384 ---GKKAEIEQLQVEISHKEEKLAKREAALEKKE 414
Score = 31.1 bits (67), Expect = 2.3
Identities = 28/104 (26%), Positives = 40/104 (38%), Gaps = 3/104 (2%)
Query: 82 RQQEQMAKIKEYEAAIEQAKVEQKKVDYEERRKTLQEETKQHQMRAQYQDQLAKKR---Y 138
RQ+EQ ++I E E A + + RRK Q Q Q + QL + R
Sbjct: 892 RQREQTSRITESEQAAGDSDEGVDSITTGGRRKKRQIAVPVSQTPGQTRYQLRRHRNVGT 951
Query: 139 EEQLVQQQKSQEEILRKQEESVAKQEALRRATIEHEMELREKNK 182
EE Q K E + + + K + + E E RE K
Sbjct: 952 EEDKAQASKGATEKQERVNDDIRKVPSPKETRTPPEGENRENGK 995
Score = 29.9 bits (64), Expect = 5.4
Identities = 31/148 (20%), Positives = 71/148 (47%), Gaps = 13/148 (8%)
Query: 35 SKSERKAMEAYRFDSSALERAASAA-------KELERSRHAKDALELSKLQESTRQQEQM 87
+K + K E + F+ + +ER K + SR + +EL +++ S ++
Sbjct: 325 AKVDIKEKELHEFEENLIEREQMEIGKLLDDQKAVLDSRRREFEMELEQMRRSLDEE--- 381
Query: 88 AKIKEYEAAIEQAKVEQKKVDYEERRKTLQEETKQHQMRAQYQDQLAKKRYEEQLVQQQK 147
++ +A IEQ +VE + + ++ E K+ ++ + +D A+ + ++ + K
Sbjct: 382 --LEGKKAEIEQLQVEISHKEEKLAKREAALEKKEEGVKKKEKDLDARLKTVKEKEKALK 439
Query: 148 SQEEILRKQEESVAK-QEALRRATIEHE 174
++E+ L + E + + +E LR+ E E
Sbjct: 440 AEEKKLHMENERLLEDKECLRKLKDEIE 467
Score = 29.5 bits (63), Expect = 7.1
Identities = 30/128 (23%), Positives = 59/128 (46%), Gaps = 7/128 (5%)
Query: 38 ERKAMEAYRFDSSALER-AASAAKELERSRHAKDALELSKLQESTRQQEQMAKIKEYEAA 96
+ KA+E R + A E+ + K E R K+ + +E Q+E ++ + E EA
Sbjct: 177 KEKALEVDRERAIAEEKFSVMNRKSSELERKLKEV----ETREKVHQREHLSLVTEREAH 232
Query: 97 IEQAKVEQKKVDYEERRKTLQEETKQHQMRAQYQDQLAKKRYEEQLVQQQKSQEEILRKQ 156
+++ + E++ TL+E+ R+ + E + +++K E + +Q
Sbjct: 233 EAVFYKQREDLQEWEKKLTLEEDRLSEVKRSINHREERVMENERTIEKKEKILENL--QQ 290
Query: 157 EESVAKQE 164
+ SVAK E
Sbjct: 291 KISVAKSE 298
Score = 29.5 bits (63), Expect = 7.1
Identities = 23/93 (24%), Positives = 48/93 (51%), Gaps = 6/93 (6%)
Query: 73 ELSKLQESTRQQEQMAKIKEYEAAIEQAKVEQKKVDYEERRKTLQEETKQHQMRAQYQDQ 132
EL++ +ES + + +KE + +AKV+ K+ + E + L E +Q ++ DQ
Sbjct: 298 ELTEKEESIKIKLNDISLKEKDFEAMKAKVDIKEKELHEFEENLIER-EQMEIGKLLDDQ 356
Query: 133 LA-----KKRYEEQLVQQQKSQEEILRKQEESV 160
A ++ +E +L Q ++S +E L ++ +
Sbjct: 357 KAVLDSRRREFEMELEQMRRSLDEELEGKKAEI 389
>At1g65010.1 68414.m07368 expressed protein similar to
endosome-associated protein (GI:1016368) [Homo sapiens];
similar to Centromeric protein E (CENP-E protein)
(Swiss-Prot:Q02224) [Homo sapiens]
Length = 1318
Score = 35.5 bits (78), Expect = 0.11
Identities = 38/136 (27%), Positives = 61/136 (44%), Gaps = 9/136 (6%)
Query: 52 LERAASAAKELERSRHA--KDALELSKLQEST--RQQEQMAKIKEYEAAIEQAKVEQKKV 107
L+ + KEL K A ELS+L ES + + ++E E E+ KK+
Sbjct: 826 LQNISEENKELRERETTLLKKAEELSELNESLVDKASKLQTVVQENEELRERETAYLKKI 885
Query: 108 DYEERRKTLQEETKQHQMRAQYQDQLAKKRYEEQLVQQQKSQEEILRKQEESVAKQEALR 167
EE K L E + + Q + K+ +E+ K EE+ + QE+ + K+ L
Sbjct: 886 --EELSK-LHEILSDQETKLQISNH-EKEELKERETAYLKKIEELSKVQEDLLNKENELH 941
Query: 168 RATIEHEMELREKNKL 183
+E E +LR K+ L
Sbjct: 942 GMVVEIE-DLRSKDSL 956
Score = 33.5 bits (73), Expect = 0.43
Identities = 39/153 (25%), Positives = 69/153 (45%), Gaps = 11/153 (7%)
Query: 38 ERKAMEAYRFDSSALERAASAAKELERSRH------AKDALELSKLQESTRQQE-QMAKI 90
E++ E+ R SSA E S K+L H + +A + K++ + E Q +
Sbjct: 293 EKEVEESNRSKSSASESMESVMKQLAELNHVLHETKSDNAAQKEKIELLEKTIEAQRTDL 352
Query: 91 KEYEAAIEQAKVEQKKVD-YEERRKTLQEETKQHQMRAQYQDQLAKKRYEEQLVQQQKSQ 149
+EY + AK E K++ E K+ E +++ + RA ++ A + L Q+ +
Sbjct: 353 EEYGRQVCIAKEEASKLENLVESIKSELEISQEEKTRALDNEKAATSNIQNLLDQRTELS 412
Query: 150 EEILR---KQEESVAKQEALRRATIEHEMELRE 179
E+ R ++E+S E+L A E E E
Sbjct: 413 IELERCKVEEEKSKKDMESLTLALQEASTESSE 445
>At1g28420.1 68414.m03494 homeobox transcription factor, putative
similar to homeobox transcription factor Hox7 GI:19486
[Lycopersicon peruvianum]
Length = 1703
Score = 35.5 bits (78), Expect = 0.11
Identities = 21/98 (21%), Positives = 56/98 (57%), Gaps = 5/98 (5%)
Query: 73 ELSKLQESTRQQEQMAKIKEYEAAIEQAKVEQKKVDYEERRKTLQEETKQHQMRAQYQDQ 132
+L KL+ ++ E+ + KE E + + E++++ R + +EE Q + R + + +
Sbjct: 382 DLEKLEIQRKKNEERMR-KEMERNERERRKEEERL---MRERIKEEERLQREQRREVERR 437
Query: 133 LAKKRYEEQLVQQQKSQEEILRKQEESVAKQEALRRAT 170
+ E + +++K ++EI R++++++ ++ A+ +AT
Sbjct: 438 EKFLQRENERAEKKKQKDEI-RREKDAIRRKLAIEKAT 474
Score = 30.3 bits (65), Expect = 4.0
Identities = 14/70 (20%), Positives = 42/70 (60%), Gaps = 2/70 (2%)
Query: 116 LQEETKQHQMRAQYQ-DQLAKKRYEEQLVQQQ-KSQEEILRKQEESVAKQEALRRATIEH 173
+Q + + +MR + + ++ +++ EE+L++++ K +E + R+Q V ++E + E
Sbjct: 388 IQRKKNEERMRKEMERNERERRKEEERLMRERIKEEERLQREQRREVERREKFLQRENER 447
Query: 174 EMELREKNKL 183
+ ++K+++
Sbjct: 448 AEKKKQKDEI 457
>At1g05320.1 68414.m00539 myosin-related similar to non-muscle
myosin II heavy chain (GI:19879404) [Loligo pealei];
ESTs gb|AA042402,gb|ATTS1380 come from this gene
Length = 828
Score = 35.5 bits (78), Expect = 0.11
Identities = 32/159 (20%), Positives = 79/159 (49%), Gaps = 11/159 (6%)
Query: 33 NLSKSERKAMEAYRFDSSALERAASAAKELERSRHAKDALELSKLQ-ESTRQQEQMAKIK 91
+L+K E R S+LE + E+ +S + ++LQ + ++ + +++I+
Sbjct: 532 DLTKQLTSERERLRSQISSLEEEKNQVNEIYQSTKNELVKLQAQLQVDKSKSDDMVSQIE 591
Query: 92 EYEAAIEQ-----AKVEQKKVDYEERRKTLQEET---KQHQMRAQYQDQLAKKRYEEQLV 143
+ A + + +K EQ ++ +E + + E T ++H+ +A +D L +K QL
Sbjct: 592 KLSALVAEKSVLESKFEQVEIHLKEEVEKVAELTSKLQEHKHKASDRDVLEEKAI--QLH 649
Query: 144 QQQKSQEEILRKQEESVAKQEALRRATIEHEMELREKNK 182
++ ++ + +Q+E+++ + + AT++ E + K
Sbjct: 650 KELQASHTAISEQKEALSHKHSELEATLKKSQEELDAKK 688
Score = 33.9 bits (74), Expect = 0.33
Identities = 34/152 (22%), Positives = 68/152 (44%), Gaps = 5/152 (3%)
Query: 35 SKSERKAMEAY-RFDSSALERAASAAKELERSRHAKDALELSKLQESTRQQEQMAKIKEY 93
+K+E ++A + D S + S ++L K LE Q +E++ K+ E
Sbjct: 565 TKNELVKLQAQLQVDKSKSDDMVSQIEKLSALVAEKSVLESKFEQVEIHLKEEVEKVAEL 624
Query: 94 EAAIEQAKVEQKKVDY-EERRKTLQEETKQHQMRAQYQDQLAKKRYEEQLVQQQKSQEEI 152
+ +++ K + D EE+ L +E + Q + ++ E +KSQEE+
Sbjct: 625 TSKLQEHKHKASDRDVLEEKAIQLHKELQASHTAISEQKEALSHKHSELEATLKKSQEEL 684
Query: 153 LRKQEESVAKQEALRRATIEHEMELRE-KNKL 183
K+ V + L +E +++L + K+K+
Sbjct: 685 DAKKSVIVHLESKLNE--LEQKVKLADAKSKV 714
>At5g61550.1 68418.m07724 protein kinase family protein contains
Pfam profile: PF00069 Eukaryotic protein kinase domain;
protein kinase 1, PnPK1, Populus nigra, EMBL:AB041503
Length = 845
Score = 35.1 bits (77), Expect = 0.14
Identities = 30/112 (26%), Positives = 59/112 (52%), Gaps = 10/112 (8%)
Query: 73 ELSKLQESTRQQEQMAKIKEYEAAIEQAKV-EQKKVDYEERRKTLQEETKQHQMRAQYQD 131
E+ KL+ + ++M + + E K+ E + +EE K + E K+ + A+
Sbjct: 362 EIEKLRAELKHVQEMYAMAQTETVGASKKLTELNQRRFEESEKLV--ELKEKEEVAKDTA 419
Query: 132 QLAKKRYEEQLVQQQKSQEEILRKQEESVAKQEALRRATIEHEMELREKNKL 183
K+RYEE + + +K +E +++ E++ ++EA +A E + REK+KL
Sbjct: 420 SKEKQRYEEAMKEAEKVKELMMK---EALHRREAEFKA----ERDAREKDKL 464
>At5g57200.1 68418.m07145 epsin N-terminal homology (ENTH)
domain-containing protein / clathrin assembly
protein-related low similarity to clathrin assembly
protein AP180 [Xenopus laevis] GI:6492344; contains Pfam
profile PF01417: ENTH domain
Length = 591
Score = 35.1 bits (77), Expect = 0.14
Identities = 29/107 (27%), Positives = 56/107 (52%), Gaps = 7/107 (6%)
Query: 53 ERAASAAKELERSRHAKDALELSK-LQESTRQQEQ---MAKIKEYEAAIEQAKVEQKKVD 108
+RA A+ L LEL++ Q T +Q +A ++EY Q+ QKK++
Sbjct: 261 KRAGQQAENLAEFYDYCKGLELARNFQFPTLRQPPPSFLATMEEYIKEAPQSGSVQKKLE 320
Query: 109 YEERRKTLQE-ETKQHQMRAQYQDQLAKKRYEEQLVQQQKSQ--EEI 152
Y+E+ + QE E +Q + A+ ++Q ++ L+++++ + EEI
Sbjct: 321 YQEKEEEEQEQEEEQPEEPAEEENQNENTENDQPLIEEEEEEPKEEI 367
>At5g40010.1 68418.m04852 AAA-type ATPase family protein contains
Pfam profile: ATPase family PF00004
Length = 514
Score = 35.1 bits (77), Expect = 0.14
Identities = 19/71 (26%), Positives = 46/71 (64%), Gaps = 4/71 (5%)
Query: 94 EAAIEQAKVEQKKVDYEERRKTLQEETKQHQMRAQYQDQLAKKRYEEQLVQQQKSQEEIL 153
E +++++VE K++ + + L+EE ++ + R + D+ KK+ EE++ ++++ +++I
Sbjct: 441 ENLLKKSEVETKEICLKRLIEALKEEKEEAKRRIE--DEEKKKKEEEEIKRKKREEKKI- 497
Query: 154 RKQEESVAKQE 164
K+EE K+E
Sbjct: 498 -KKEEKEEKEE 507
Score = 31.5 bits (68), Expect = 1.8
Identities = 18/51 (35%), Positives = 31/51 (60%), Gaps = 1/51 (1%)
Query: 70 DALELSKLQESTRQQEQMAKIKEYEAAIEQAKVEQKKVDYEERRKTLQEET 120
+AL+ K +E+ R+ E K K+ E I++ K E+KK+ EE+ + + ET
Sbjct: 461 EALKEEK-EEAKRRIEDEEKKKKEEEEIKRKKREEKKIKKEEKEEKEENET 510
Score = 30.3 bits (65), Expect = 4.0
Identities = 11/28 (39%), Positives = 18/28 (64%)
Query: 339 RLNKGFYRNLLMYGPPGTGKTLFSKKLA 366
++ K + R L++GPPGTGK+ +A
Sbjct: 237 KIGKAWKRGYLLFGPPGTGKSTMIAAMA 264
Score = 29.1 bits (62), Expect = 9.4
Identities = 31/135 (22%), Positives = 64/135 (47%), Gaps = 10/135 (7%)
Query: 51 ALERAASAAKELERSRHAKDALE-LSKLQESTRQQEQMAKIKEYEAAIEQAKVEQKKVDY 109
AL R K +E S +A + L+ ++++ E + +E +++ D
Sbjct: 380 ALIRKGRMDKHIEMSYCGFEAFKVLANNYLDAKEEDDNELFDEIKRLLEVEEIKMTPADV 439
Query: 110 EERR-KTLQEETKQHQMRA-----QYQDQLAKKRYEEQLVQQQKSQEEILRK--QEESVA 161
E K + ETK+ ++ + + + AK+R E++ +++K +EEI RK +E+ +
Sbjct: 440 GENLLKKSEVETKEICLKRLIEALKEEKEEAKRRIEDE-EKKKKEEEEIKRKKREEKKIK 498
Query: 162 KQEALRRATIEHEME 176
K+E + E M+
Sbjct: 499 KEEKEEKEENETTMK 513
>At5g14270.1 68418.m01669 DNA-binding bromodomain-containing protein
contains bromodomain, INTERPRO:IPR001487
Length = 688
Score = 35.1 bits (77), Expect = 0.14
Identities = 30/101 (29%), Positives = 50/101 (49%), Gaps = 8/101 (7%)
Query: 80 STRQQEQMAKIKEYEAAIEQAKVEQKKVDYEERRKTL-QEETKQHQ--MRAQYQDQLAKK 136
S + ++Q+ K Y AAI K + + R K L Q +T+ + R + + +L KK
Sbjct: 495 SAQNEKQLPPEKSYRAAI--LKNRFADIILKAREKPLNQNDTRDPEKLQREREELELQKK 552
Query: 137 RYEEQLVQQQKSQEEILRKQEESVAKQ---EALRRATIEHE 174
+ + +L + K+ EE RK E A + EA R+ +E E
Sbjct: 553 KEKARLQAEAKAAEEARRKAEAQAAAEAAAEAKRKLELERE 593
>At4g32190.1 68417.m04581 centromeric protein-related low similarity
to SP|Q02224 Centromeric protein E (CENP-E protein)
{Homo sapiens}
Length = 783
Score = 35.1 bits (77), Expect = 0.14
Identities = 23/82 (28%), Positives = 43/82 (52%), Gaps = 5/82 (6%)
Query: 98 EQAKVEQKKVDYEERRKTLQEETKQHQMRAQYQDQLAKKRYEEQLVQQQKSQEEILRKQE 157
++ K+ + K + E+R KT+ E + +H+ Q++L KR +L Q + EE+ K
Sbjct: 138 DKNKLNRAKEELEKREKTISEASLKHE---SLQEEL--KRANVELASQAREIEELKHKLR 192
Query: 158 ESVAKQEALRRATIEHEMELRE 179
E ++ AL+ + E EL +
Sbjct: 193 ERDEERAALQSSLTLKEEELEK 214
Score = 32.7 bits (71), Expect = 0.76
Identities = 37/188 (19%), Positives = 82/188 (43%), Gaps = 25/188 (13%)
Query: 36 KSERKAMEAYRFDSSALERAASAAKELERSRHAKDALELSKLQESTRQQEQMAKIKEYEA 95
+SER + + ALER S KEL L L+E ++++ + ++ ++
Sbjct: 388 ESERVKLRVVEAKNFALEREISVQKEL-----------LEDLREELQKEKPLLELAMHDI 436
Query: 96 AIEQAKVEQKKVDYEERRKTLQEETKQHQMRAQYQDQLAKKRYE-EQLVQQQKSQEEILR 154
++ Q ++ +K ++ + LQE+ + L + + E + L +Q S E +L+
Sbjct: 437 SVIQDELYKKANAFQVSQNLLQEK----------ESSLVEAKLEIQHLKSEQASLELLLQ 486
Query: 155 KQEESVAKQEALRRATIEHEMELREKNKLXXXXXXXXXXXXXXXXNRDINLEQIRLKAAE 214
+++E +A+ R E E+ E L +D++L +I +
Sbjct: 487 EKDEELAE---ARNKLGEVNQEVTELKALMISREDQLMEATEMLKEKDVHLHRIEGELGS 543
Query: 215 NRVTILES 222
+++ + E+
Sbjct: 544 SKLKVTEA 551
Score = 31.1 bits (67), Expect = 2.3
Identities = 26/122 (21%), Positives = 61/122 (50%), Gaps = 3/122 (2%)
Query: 56 ASAAKELERSRHAKDALELSK-LQESTRQQEQMAKIKEYEAAIEQAKVEQKKVDYEERRK 114
+ A K+LE+ + + L K +E Q+++ K+KE E + + D+ + +K
Sbjct: 271 SKATKKLEQEKLRETEANLKKQTEEWLIAQDEVNKLKE-ETVKRLGEANETMEDFMKVKK 329
Query: 115 TLQEETKQHQMRAQYQDQLAKKRYEEQLVQQQKSQEEILRKQEESVAKQEALRRATIEHE 174
L + + + ++ ++++ EE+ + +K EE+ +++ ++ ++LR A E E
Sbjct: 330 LLTD-VRFELISSREALVFSREQMEEKELLLEKQLEELEEQRKSVLSYMQSLRDAHTEVE 388
Query: 175 ME 176
E
Sbjct: 389 SE 390
>At4g08580.1 68417.m01410 microfibrillar-associated protein-related
similar to Microfibrillar-associated protein 1
(Associated microfibril protein) (AMF)
(Swiss-Prot:P55080) [Gallus gallus]
Length = 435
Score = 35.1 bits (77), Expect = 0.14
Identities = 39/142 (27%), Positives = 66/142 (46%), Gaps = 14/142 (9%)
Query: 48 DSSALERAASAAKELERSRHAKDALELSKLQEST--RQQEQMAKIKEYEAAIEQ-----A 100
D ALE KE + R A++ L L+E +++E+ + EYE E A
Sbjct: 121 DEDALEERRRRIKE-KNLRRAQEEAALLPLEEEDEIQEEEEEEEESEYETDSEDDMPGIA 179
Query: 101 KVEQKKVDYEERRKTLQEETKQHQMRAQYQDQLAKKRYEEQLVQQQKSQEEILRKQEESV 160
++ V ER + E + + A ++LAK++ E++ ++ ++ E +RK EE +
Sbjct: 180 LIKPVFVPKAERDTIAERERLEAEEEAL--EELAKRKLEQRKIETKQIVVEEVRKDEE-I 236
Query: 161 AKQEALRRATI---EHEMELRE 179
K L A I E + EL E
Sbjct: 237 RKNILLEEANIGDVETDDELNE 258
>At2g31370.2 68415.m03834 bZIP transcription factor (POSF21)
identical to GB:Q04088
Length = 398
Score = 35.1 bits (77), Expect = 0.14
Identities = 16/72 (22%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
Query: 81 TRQQEQMAKIKEYEAAIEQAKVEQKKVDYEERRKTLQEETKQHQMRAQYQDQLA-KKRYE 139
+ QQ+ + + + + + +Q ++ +++++ Q++ +QHQ + Q Q Q +++
Sbjct: 311 SNQQQFYSNNQSMQTILAAKQFQQLQIHSQKQQQQQQQQQQQHQQQQQQQQQYQFQQQQM 370
Query: 140 EQLVQQQKSQEE 151
+QL+QQ+ Q+E
Sbjct: 371 QQLMQQRLQQQE 382
Score = 29.1 bits (62), Expect = 9.4
Identities = 13/56 (23%), Positives = 33/56 (58%), Gaps = 1/56 (1%)
Query: 104 QKKVDYEERRKTLQEETKQHQMRAQYQDQLAKKRYEEQLVQQQKSQEEILRKQEES 159
QK+ +++++ ++ +Q Q + Q+Q Q ++ +++L QQQ+ Q + K ++
Sbjct: 340 QKQQQQQQQQQQQHQQQQQQQQQYQFQQQQMQQLMQQRL-QQQEQQNGVRLKPSQA 394
>At2g31370.1 68415.m03833 bZIP transcription factor (POSF21)
identical to GB:Q04088
Length = 398
Score = 35.1 bits (77), Expect = 0.14
Identities = 16/72 (22%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
Query: 81 TRQQEQMAKIKEYEAAIEQAKVEQKKVDYEERRKTLQEETKQHQMRAQYQDQLA-KKRYE 139
+ QQ+ + + + + + +Q ++ +++++ Q++ +QHQ + Q Q Q +++
Sbjct: 311 SNQQQFYSNNQSMQTILAAKQFQQLQIHSQKQQQQQQQQQQQHQQQQQQQQQYQFQQQQM 370
Query: 140 EQLVQQQKSQEE 151
+QL+QQ+ Q+E
Sbjct: 371 QQLMQQRLQQQE 382
Score = 29.1 bits (62), Expect = 9.4
Identities = 13/56 (23%), Positives = 33/56 (58%), Gaps = 1/56 (1%)
Query: 104 QKKVDYEERRKTLQEETKQHQMRAQYQDQLAKKRYEEQLVQQQKSQEEILRKQEES 159
QK+ +++++ ++ +Q Q + Q+Q Q ++ +++L QQQ+ Q + K ++
Sbjct: 340 QKQQQQQQQQQQQHQQQQQQQQQYQFQQQQMQQLMQQRL-QQQEQQNGVRLKPSQA 394
>At2g18193.1 68415.m02117 AAA-type ATPase family protein contains
Pfam profile: ATPase family PF00004
Length = 495
Score = 35.1 bits (77), Expect = 0.14
Identities = 24/91 (26%), Positives = 45/91 (49%), Gaps = 8/91 (8%)
Query: 339 RLNKGFYRNLLMYGPPGTGKTLFSKKLAKHSGMDYAIMTGGDVAPMGKDAVAAIHKVFDW 398
R+ K + R L+YGPPGTGK+ +A + D + + G+ + +V
Sbjct: 237 RVGKAWKRGYLLYGPPGTGKSSLIAAMANYLKFDVFDLELSSIYDNGE-----LKRVL-- 289
Query: 399 ANTSRKGVLVFID-EADAFLRKRSSEKISED 428
+T+ + +LV D + +A +R R +E ++
Sbjct: 290 LSTTNRSILVIEDIDCNAEVRDREAENQEDE 320
>At1g22930.1 68414.m02866 T-complex protein 11 contains Pfam
PF05794: T-complex protein 11
Length = 1131
Score = 35.1 bits (77), Expect = 0.14
Identities = 25/124 (20%), Positives = 59/124 (47%), Gaps = 4/124 (3%)
Query: 32 TNLSKSERKAMEAYRFDSSALERAASAAKELERSRHAKDALELSKLQESTRQQEQMAKIK 91
+ + K+E M+ + A + R A+++ +++ S Q+ A+ K
Sbjct: 145 SRVQKAEANRMKILKASHQKRACAKERTSQSMMRRMARESKYKERVRASINQKRVAAEKK 204
Query: 92 EY---EAAIEQAKVEQKKVDYEERRKTLQEETKQHQMRAQYQDQLAK-KRYEEQLVQQQK 147
EA ++A+ ++V + + Q E ++ +MR + +D+L + KRY + ++Q++
Sbjct: 205 RLGLLEAEKKKARARVQQVRHVANSVSNQREIERSKMRDKLEDKLQRAKRYRSEFLRQRR 264
Query: 148 SQEE 151
Q +
Sbjct: 265 RQRD 268
Score = 32.7 bits (71), Expect = 0.76
Identities = 29/148 (19%), Positives = 65/148 (43%), Gaps = 4/148 (2%)
Query: 29 APSTNLSKSERKAMEAYRFDSSALERAASAAKELERSRHAKDALELSKLQESTRQQEQMA 88
+PS + + + +EA R ++ +R AK R + + +K R + +
Sbjct: 79 SPSRSSDEELGQRIEA-RLLAAEQKRLEILAKAQMRLAKLDELRQAAKTSVEIRSERERV 137
Query: 89 KI-KEYEAAIEQAKVEQKKV--DYEERRKTLQEETKQHQMRAQYQDQLAKKRYEEQLVQQ 145
K+ + E+ +++A+ + K+ ++R +E T Q MR ++ K+R + Q+
Sbjct: 138 KLGTQVESRVQKAEANRMKILKASHQKRACAKERTSQSMMRRMARESKYKERVRASINQK 197
Query: 146 QKSQEEILRKQEESVAKQEALRRATIEH 173
+ + E+ E+ K+ R + H
Sbjct: 198 RVAAEKKRLGLLEAEKKKARARVQQVRH 225
>At1g22260.1 68414.m02782 expressed protein
Length = 857
Score = 35.1 bits (77), Expect = 0.14
Identities = 28/119 (23%), Positives = 57/119 (47%), Gaps = 7/119 (5%)
Query: 52 LERAASAAKELERSRHAKDALELSKLQESTRQQEQMAKIKEYEAAIEQAKVEQKKVDYE- 110
+ + A A + + + + L S ++QE K+ E ++ K E+ + D +
Sbjct: 404 VSKHADAESAISQLKEEMETLLESVKTSEDKKQELSLKLSSLEMESKE-KCEKLQADAQR 462
Query: 111 --ERRKTLQEETKQHQMRAQYQDQLAKKRYEEQLVQQQKSQEEILRKQEESVAKQEALR 167
E +TLQ+E++ HQ++A D LAK+ + Q V ++K + + E Q+ ++
Sbjct: 463 QVEELETLQKESESHQLQA---DLLAKEVNQLQTVIEEKGHVILQCNENEKQLNQQIIK 518
Score = 33.1 bits (72), Expect = 0.57
Identities = 26/128 (20%), Positives = 54/128 (42%), Gaps = 5/128 (3%)
Query: 54 RAASAAKELERSRHAKDALELSKLQESTRQQEQMAKIKEYEAAIEQAKVEQKKVDYEERR 113
R +KEL L S++Q +E++ +K A+++ K YE+
Sbjct: 626 REEHESKELNLKAKYDQELRQSQIQAENELKERITALKSEH----DAQLKAFKCQYEDDC 681
Query: 114 KTLQEETKQHQMRAQYQDQLAKKRYEEQLVQQQKSQEEILRKQEESVAKQEALRRATIEH 173
K LQEE + + + Q L + ++ + + ++E+ + S++K L +
Sbjct: 682 KKLQEELDLQRKKEERQRALVQLQW-KVMSDNPPEEQEVNSNKNYSISKDSRLGGSKRSE 740
Query: 174 EMELREKN 181
+ +R N
Sbjct: 741 HIRVRSDN 748
>At1g17440.2 68414.m02133 transcription initiation factor IID
(TFIID) subunit A family protein similar to SP|Q16514
Transcription initiation factor TFIID 20/15 kDa subunits
(TAFII-20/TAFII-15) {Homo sapiens}; contains Pfam
profile PF03847: Transcription initiation factor TFIID
subunit A
Length = 683
Score = 35.1 bits (77), Expect = 0.14
Identities = 28/126 (22%), Positives = 67/126 (53%), Gaps = 5/126 (3%)
Query: 48 DSSALERAASAAKELERSRHAKDALELSKLQESTRQ--QEQMAKIKEYEAAIEQAKVEQK 105
+S L+ + A L++ + + L +L +S+ Q+Q+++I + + +Q+++ Q
Sbjct: 383 NSFRLQPSQRQALLLQQQQQQQQQLSSPQLHQSSMSLNQQQISQIIQQQQ--QQSQLGQS 440
Query: 106 KVDYEERRKTLQEETKQHQMRAQYQDQLAKKRYEE-QLVQQQKSQEEILRKQEESVAKQE 164
+++ ++ LQ+ +Q Q + Q Q Q +++ ++ Q+ QQQ S + ++SV+
Sbjct: 441 QMNQSHSQQQLQQMQQQLQQQPQQQMQQQQQQQQQMQINQQQPSPRMLSHAGQKSVSLTG 500
Query: 165 ALRRAT 170
+ AT
Sbjct: 501 SQPEAT 506
>At1g17440.1 68414.m02132 transcription initiation factor IID
(TFIID) subunit A family protein similar to SP|Q16514
Transcription initiation factor TFIID 20/15 kDa subunits
(TAFII-20/TAFII-15) {Homo sapiens}; contains Pfam
profile PF03847: Transcription initiation factor TFIID
subunit A
Length = 683
Score = 35.1 bits (77), Expect = 0.14
Identities = 28/126 (22%), Positives = 67/126 (53%), Gaps = 5/126 (3%)
Query: 48 DSSALERAASAAKELERSRHAKDALELSKLQESTRQ--QEQMAKIKEYEAAIEQAKVEQK 105
+S L+ + A L++ + + L +L +S+ Q+Q+++I + + +Q+++ Q
Sbjct: 383 NSFRLQPSQRQALLLQQQQQQQQQLSSPQLHQSSMSLNQQQISQIIQQQQ--QQSQLGQS 440
Query: 106 KVDYEERRKTLQEETKQHQMRAQYQDQLAKKRYEE-QLVQQQKSQEEILRKQEESVAKQE 164
+++ ++ LQ+ +Q Q + Q Q Q +++ ++ Q+ QQQ S + ++SV+
Sbjct: 441 QMNQSHSQQQLQQMQQQLQQQPQQQMQQQQQQQQQMQINQQQPSPRMLSHAGQKSVSLTG 500
Query: 165 ALRRAT 170
+ AT
Sbjct: 501 SQPEAT 506
>At5g55860.1 68418.m06963 expressed protein contains Pfam profile
PF05701: Plant protein of unknown function (DUF827);
expression supported by MPSS
Length = 649
Score = 34.7 bits (76), Expect = 0.19
Identities = 36/143 (25%), Positives = 64/143 (44%), Gaps = 6/143 (4%)
Query: 35 SKSERKAMEAYRFDSSAL-ERAASAAKELERSR-HAKDALELSKLQESTRQQEQMAKIKE 92
+++ R+ E R + L + A SA LE S H + AL+ ++ + + + + +IK
Sbjct: 399 TEAARREAEGMRNKAKELMKEAESAHLALEDSELHLRVALDEAE-EAKAAETKALEQIKS 457
Query: 93 YEAAIEQAKVEQKKVDYEERRKTLQEETKQHQMRAQYQDQLAKKRYEEQLVQQQ---KSQ 149
A+ + QEE K RA+ D+LA+ + L Q + S+
Sbjct: 458 MSEKTNAARNSTSSESGSQSITLSQEEFKSLSKRAEVFDKLAEMKVAAALAQVEAVRASE 517
Query: 150 EEILRKQEESVAKQEALRRATIE 172
E L+K E + + + L+ AT E
Sbjct: 518 NETLKKLETTQEEIKKLKTATEE 540
>At5g53020.1 68418.m06585 expressed protein
Length = 721
Score = 34.7 bits (76), Expect = 0.19
Identities = 33/148 (22%), Positives = 68/148 (45%), Gaps = 7/148 (4%)
Query: 34 LSKSERKAMEAYRFDSSALE-RAASAAKELERSRHAKDALELSKLQESTRQQEQMAKI-- 90
L +S+ KA+E + LE R A KE++ R ++ E RQ++ ++
Sbjct: 114 LLESKDKAIEEEKRKCELLEERLVKAEKEVQDLRETQERDVQEHSSELWRQKKTFLELAS 173
Query: 91 --KEYEAAIEQA--KVEQKKVDYEERRKTLQEETKQHQMRAQYQDQLAKKRYEEQLVQQQ 146
++ EA + +A ++E K + E+ + + K + + + + KK + +Q
Sbjct: 174 SQRQLEAELSRANKQIEAKGHELEDLSLEINKMRKDLEQKDRILAVMMKKSKLDMTEKQM 233
Query: 147 KSQEEILRKQEESVAKQEALRRATIEHE 174
+E +KQ+E AK+ + + +HE
Sbjct: 234 TLLKEAKKKQDEEEAKKWKMNPKSRKHE 261
>At5g17730.1 68418.m02079 AAA-type ATPase family protein contains
Pfam profile: ATPase family PF00004
Length = 470
Score = 34.7 bits (76), Expect = 0.19
Identities = 15/34 (44%), Positives = 20/34 (58%)
Query: 339 RLNKGFYRNLLMYGPPGTGKTLFSKKLAKHSGMD 372
R+ K + R L+YGPPGTGKT +A + D
Sbjct: 239 RVGKPWKRGYLLYGPPGTGKTSLVAAIANYLKFD 272
>At4g03000.2 68417.m00408 expressed protein contains similarity to
hypothetical proteins
Length = 814
Score = 34.7 bits (76), Expect = 0.19
Identities = 36/173 (20%), Positives = 75/173 (43%), Gaps = 11/173 (6%)
Query: 57 SAAKELERSRHAKDALELSKLQESTRQQEQMAKIKEYEAA--IEQAKVEQKKV-----DY 109
+A +LER+ + LEL Q +++ + A I+ E+A +AK +++ +
Sbjct: 544 NATNQLERTNNTIRRLELE--QSLLKREREAANIRASESAESCREAKERVQRLLKNSQSW 601
Query: 110 EERRKTLQEETK-QHQMRAQYQDQLAKKRYEEQLVQQQKSQEEILRKQEESVAKQEALRR 168
E ++ LQEE K Q A Q ++AK + + ++ QE+ + + A R
Sbjct: 602 EGQKNLLQEELKSQRDKVAGLQQEVAKAKTRQNQIEATWKQEKSATGKLTAQAAALKKER 661
Query: 169 ATIEHEMELREKNKLXXXXXXXXXXXXXXXXNRDINLEQIRLKAAENRVTILE 221
+E E+ E+ ++ D + +++LK+ ++ L+
Sbjct: 662 GKLE-ELGKAEEERIKTKAENDVKYYIENIKRLDTEISKLKLKSDSLKIAALK 713
>At4g03000.1 68417.m00407 expressed protein contains similarity to
hypothetical proteins
Length = 814
Score = 34.7 bits (76), Expect = 0.19
Identities = 36/173 (20%), Positives = 75/173 (43%), Gaps = 11/173 (6%)
Query: 57 SAAKELERSRHAKDALELSKLQESTRQQEQMAKIKEYEAA--IEQAKVEQKKV-----DY 109
+A +LER+ + LEL Q +++ + A I+ E+A +AK +++ +
Sbjct: 544 NATNQLERTNNTIRRLELE--QSLLKREREAANIRASESAESCREAKERVQRLLKNSQSW 601
Query: 110 EERRKTLQEETK-QHQMRAQYQDQLAKKRYEEQLVQQQKSQEEILRKQEESVAKQEALRR 168
E ++ LQEE K Q A Q ++AK + + ++ QE+ + + A R
Sbjct: 602 EGQKNLLQEELKSQRDKVAGLQQEVAKAKTRQNQIEATWKQEKSATGKLTAQAAALKKER 661
Query: 169 ATIEHEMELREKNKLXXXXXXXXXXXXXXXXNRDINLEQIRLKAAENRVTILE 221
+E E+ E+ ++ D + +++LK+ ++ L+
Sbjct: 662 GKLE-ELGKAEEERIKTKAENDVKYYIENIKRLDTEISKLKLKSDSLKIAALK 713
>At4g02710.1 68417.m00366 kinase interacting family protein similar
to kinase interacting protein 1 (GI:13936326) [Petunia
integrifolia]
Length = 1111
Score = 34.7 bits (76), Expect = 0.19
Identities = 34/150 (22%), Positives = 62/150 (41%), Gaps = 2/150 (1%)
Query: 34 LSKSERKAMEAYRFDSSALERAASAAKELERSRHAKDALELSKLQESTRQQEQMAKIKEY 93
LS E + A +RAASA E++ R LE K + + + KI +
Sbjct: 242 LSNLESEVSRAQADSRGINDRAASAEAEIQTLRETLYKLESEKESSFLQYHKCLQKIADL 301
Query: 94 EAAIEQAKVEQKKVDYEERRKTLQEETKQHQMRAQYQDQLAKKRYEEQLVQQQKSQEEIL 153
E + A E + + +TL K+ +A+ + A +Y + L +E +
Sbjct: 302 EDGLSVAHKEAGERASKAETETL--ALKRSLAKAETDKETALIQYRQCLNTISNLEERLR 359
Query: 154 RKQEESVAKQEALRRATIEHEMELREKNKL 183
+ +E++ E +A +E E + +KL
Sbjct: 360 KAEEDARLINERAEKAGVEVENLKQTVSKL 389
>At3g48670.2 68416.m05314 XH/XS domain-containing protein / XS zinc
finger domain-containing protein contains Pfam domains
PF03469: XH domain, PF03468: XS domain and PF03470: XS
zinc finger domain
Length = 647
Score = 34.7 bits (76), Expect = 0.19
Identities = 31/154 (20%), Positives = 66/154 (42%), Gaps = 5/154 (3%)
Query: 34 LSKSERKAMEAYRFDSSALERAASAAKELERSRHAKDALELSKLQESTRQQEQMAKIKEY 93
L + ++K M+ S + E + K EL+ +QE T Q + ++
Sbjct: 274 LVEEKKKDMKEIEELCSVKSEELNQLMEEKEKNQQKHYRELNAIQERTMSHIQKI-VDDH 332
Query: 94 EAAIEQAKVEQKKVDY---EERRKTLQEETKQHQMRAQYQDQLAKKR-YEEQLVQQQKSQ 149
E + E+KK++ E ++ + T++ ++ + +K E ++QQK+
Sbjct: 333 EKLKRLLESERKKLEIKCNELAKREVHNGTERMKLSEDLEQNASKNSSLELAAMEQQKAD 392
Query: 150 EEILRKQEESVAKQEALRRATIEHEMELREKNKL 183
EE+ + E+ ++E L I E + +K +
Sbjct: 393 EEVKKLAEDQRRQKEELHEKIIRLERQRDQKQAI 426
>At3g48670.1 68416.m05313 XH/XS domain-containing protein / XS zinc
finger domain-containing protein contains Pfam domains
PF03469: XH domain, PF03468: XS domain and PF03470: XS
zinc finger domain
Length = 647
Score = 34.7 bits (76), Expect = 0.19
Identities = 31/154 (20%), Positives = 66/154 (42%), Gaps = 5/154 (3%)
Query: 34 LSKSERKAMEAYRFDSSALERAASAAKELERSRHAKDALELSKLQESTRQQEQMAKIKEY 93
L + ++K M+ S + E + K EL+ +QE T Q + ++
Sbjct: 274 LVEEKKKDMKEIEELCSVKSEELNQLMEEKEKNQQKHYRELNAIQERTMSHIQKI-VDDH 332
Query: 94 EAAIEQAKVEQKKVDY---EERRKTLQEETKQHQMRAQYQDQLAKKR-YEEQLVQQQKSQ 149
E + E+KK++ E ++ + T++ ++ + +K E ++QQK+
Sbjct: 333 EKLKRLLESERKKLEIKCNELAKREVHNGTERMKLSEDLEQNASKNSSLELAAMEQQKAD 392
Query: 150 EEILRKQEESVAKQEALRRATIEHEMELREKNKL 183
EE+ + E+ ++E L I E + +K +
Sbjct: 393 EEVKKLAEDQRRQKEELHEKIIRLERQRDQKQAI 426
>At2g44860.1 68415.m05585 60S ribosomal protein L24, putative
Length = 159
Score = 34.7 bits (76), Expect = 0.19
Identities = 25/88 (28%), Positives = 44/88 (50%), Gaps = 4/88 (4%)
Query: 38 ERKAMEAYRFDSSALERAASAAKELERSRHAKDALELSKLQESTRQQEQMAKIKEYEAAI 97
E+K R+D + E A K++ + R A++A + + +Q++ +KE + I
Sbjct: 72 EKKRNRPERYDRNVTENTLMAIKKIAKIRTAREAKHIENRLKPNKQKKLNDDMKELDQNI 131
Query: 98 E--QAKVEQK-KVDYEERRKTLQEETKQ 122
QA QK KVD E +K++Q E +
Sbjct: 132 HMVQAPGAQKIKVDVSE-KKSVQNEAME 158
>At2g26570.1 68415.m03187 expressed protein contains Pfam profile
PF05701: Plant protein of unknown function (DUF827);
weak similarity to merozoite surface protein 3 alpha
(GI:27596802) [Plasmodium vivax]
Length = 807
Score = 34.7 bits (76), Expect = 0.19
Identities = 34/135 (25%), Positives = 62/135 (45%), Gaps = 8/135 (5%)
Query: 26 GVAAPSTNLSKSERKAMEAYRFDSSALERAASAAKELERSRHAKDALELSKLQESTRQQE 85
G+A + +K++ + +A ++A+ +S +ELE DAL K + +E
Sbjct: 274 GIAEDVSVAAKAQLEVAKARH--TTAITELSSVKEELETLHKEYDALVQDKDVAVKKVEE 331
Query: 86 QMAKIKEYEAAIEQAKVE--QKKVDYEERRKTLQEETKQHQMRAQYQDQLAKKRYEEQLV 143
M KE E +E+ +E K E + E +Q A +DQ R+E++L
Sbjct: 332 AMLASKEVEKTVEELTIELIATKESLESAHASHLEAEEQRIGAAMARDQ-DTHRWEKELK 390
Query: 144 QQQKSQEEILRKQEE 158
Q ++EE+ R ++
Sbjct: 391 Q---AEEELQRLNQQ 402
Score = 32.3 bits (70), Expect = 1.0
Identities = 35/164 (21%), Positives = 70/164 (42%), Gaps = 10/164 (6%)
Query: 27 VAAPSTNLSKSERKAMEAYRFDSSALERA--ASAAKELERS--RHAKDALELSKLQESTR 82
+A+ + + K +E + A E A A + E+ R R AK+ E +K ST
Sbjct: 532 IASVQSKEKDAREKMVELPKQLQQAAEEADEAKSLAEVAREELRKAKEEAEQAKAGASTM 591
Query: 83 QQEQMAKIKEYEAAIEQAKVEQKKVD-YEERRKTLQ----EETKQHQMRAQYQDQLAKKR 137
+ A KE EAA ++ + EE TL+ + + + + +L+K+
Sbjct: 592 ESRLFAAQKEIEAAKASERLALAAIKALEESESTLKANDTDSPRSVTLSLEEYYELSKRA 651
Query: 138 YEEQLVQQQKSQEEILRKQEESVAKQEALRR-ATIEHEMELREK 180
+E + + + + R +E + +L + + +M+ R+K
Sbjct: 652 HEAEELANARVAAAVSRIEEAKETEMRSLEKLEEVNRDMDARKK 695
>At2g15270.1 68415.m01741 expressed protein
Length = 194
Score = 34.7 bits (76), Expect = 0.19
Identities = 20/87 (22%), Positives = 46/87 (52%), Gaps = 1/87 (1%)
Query: 98 EQAKVEQKKVDYEERRKTLQEETKQHQMRAQYQDQLAKKRYEEQLVQQQKSQEEILRKQE 157
EQ ++ + +DY +R K + ++ + + +++ +KKR + Q +Q+K +++
Sbjct: 92 EQDRLTRMDIDYNKRLKMAEFTIRREEKQKAAEEKTSKKRLKRQKKKQKKQEKKQKPNTT 151
Query: 158 ESVAKQEALRR-ATIEHEMELREKNKL 183
E KQ + ++ E E E+ E++ L
Sbjct: 152 EEEVKQPRVGEISSDEGEDEVEEESVL 178
Score = 30.3 bits (65), Expect = 4.0
Identities = 20/87 (22%), Positives = 45/87 (51%), Gaps = 3/87 (3%)
Query: 76 KLQESTRQQEQMAKIKEYEAA---IEQAKVEQKKVDYEERRKTLQEETKQHQMRAQYQDQ 132
K+ E T ++E+ K E + + +++ K +QKK + +++ T +EE KQ ++ D+
Sbjct: 108 KMAEFTIRREEKQKAAEEKTSKKRLKRQKKKQKKQEKKQKPNTTEEEVKQPRVGEISSDE 167
Query: 133 LAKKRYEEQLVQQQKSQEEILRKQEES 159
+ EE +++ + I ++ S
Sbjct: 168 GEDEVEEESVLEPLRPMFNIKFQENRS 194
>At2g14140.1 68415.m01575 hypothetical protein similar to At2g04970,
At2g15200, At1g32830, At3g30450, At4g03990, At5g34895,
At3g47270, At2g02200
Length = 847
Score = 34.7 bits (76), Expect = 0.19
Identities = 27/132 (20%), Positives = 65/132 (49%), Gaps = 5/132 (3%)
Query: 53 ERAASAAKELERSRHAKDALELSKLQESTRQQEQMAKIKEYEAAIEQAKVEQKKVDYEER 112
E K+ E + ++ + E T +QE + K + E E+ K E++ + EE
Sbjct: 435 EMEGEEEKQEEEGKEEEEEKVEYRGDEGTEKQE-IPKQGDEEMEGEEEKQEEEGKEKEEE 493
Query: 113 RKTLQ--EETKQHQMRAQYQDQLAKKRYEEQLVQQQKSQEEILRKQEESVAKQEALRRAT 170
+ + EET++ ++ Q +++ + +++ +++ +E++ + +E KQE ++
Sbjct: 494 KVEYRGDEETEKQEIPKQGDEEMEGEEEKQEEEGKEEEEEKVEYRGDEGTEKQEIPKQG- 552
Query: 171 IEHEMELREKNK 182
+ EME E+ +
Sbjct: 553 -DEEMEGEEEKQ 563
Score = 32.7 bits (71), Expect = 0.76
Identities = 23/105 (21%), Positives = 55/105 (52%), Gaps = 3/105 (2%)
Query: 79 ESTRQQEQMAKIKEYEAAIEQAKVEQKKVDYEERRKTLQEE-TKQHQMRAQYQDQLAKKR 137
E T +QE + E E+ + E+ K + EE+ + +E T++ ++ Q +++ +
Sbjct: 421 EGTEKQEIPKQGDEEMEGEEEKQEEEGKEEEEEKVEYRGDEGTEKQEIPKQGDEEMEGEE 480
Query: 138 YEEQLVQQQKSQEEILRKQEESVAKQEALRRATIEHEMELREKNK 182
+++ ++K +E++ + +E KQE ++ + EME E+ +
Sbjct: 481 EKQEEEGKEKEEEKVEYRGDEETEKQEIPKQG--DEEMEGEEEKQ 523
Score = 32.7 bits (71), Expect = 0.76
Identities = 28/150 (18%), Positives = 65/150 (43%), Gaps = 5/150 (3%)
Query: 36 KSERKAMEAYRFDSSA----LERAASAAKELERSRHAKDALELSKLQESTRQQEQMAKIK 91
K E + YR D + + E E + ++ E + + R E+ K +
Sbjct: 448 KEEEEEKVEYRGDEGTEKQEIPKQGDEEMEGEEEKQEEEGKEKEEEKVEYRGDEETEKQE 507
Query: 92 EYEAAIEQAKVEQKKVDYEERRKTLQEETKQHQMRAQYQDQLAKKRYEEQLVQQQKSQEE 151
+ E+ + E++K + EE ++ +E+ + + ++ K+ EE +++K +EE
Sbjct: 508 IPKQGDEEMEGEEEKQE-EEGKEEEEEKVEYRGDEGTEKQEIPKQGDEEMEGEEEKQEEE 566
Query: 152 ILRKQEESVAKQEALRRATIEHEMELREKN 181
++EE + + +T E +++N
Sbjct: 567 GKEEEEEKICVEYKDHHSTCNVEETEKQEN 596
Score = 32.3 bits (70), Expect = 1.0
Identities = 28/136 (20%), Positives = 63/136 (46%), Gaps = 7/136 (5%)
Query: 53 ERAASAAKELERSRHAKDALELSKLQESTRQQEQMAKIKEYEAAIEQAKVEQKKVDYE-- 110
E+ KE E + E ++ QE +Q ++ + +E + E + E++KV+Y
Sbjct: 481 EKQEEEGKEKEEEKVEYRGDEETEKQEIPKQGDEEMEGEEEKQEEEGKEEEEEKVEYRGD 540
Query: 111 ---ERRKTLQEETKQHQMRAQYQDQLAKKRYEEQLVQQQKSQEEILRKQEESVAKQEALR 167
E+++ ++ ++ + + Q++ K+ EE++ + K +E KQE +
Sbjct: 541 EGTEKQEIPKQGDEEMEGEEEKQEEEGKEEEEEKICVEYKDHHSTCNVEE--TEKQENPK 598
Query: 168 RATIEHEMELREKNKL 183
+ E E E ++ K+
Sbjct: 599 QGDEEMEREEGKEEKV 614
>At1g29000.1 68414.m03546 heavy-metal-associated domain-containing
protein similar to farnesylated protein ATFP3
[GI:4097547]; contains Pfam profile PF00403:
Heavy-metal-associated domain
Length = 287
Score = 34.7 bits (76), Expect = 0.19
Identities = 20/74 (27%), Positives = 38/74 (51%)
Query: 79 ESTRQQEQMAKIKEYEAAIEQAKVEQKKVDYEERRKTLQEETKQHQMRAQYQDQLAKKRY 138
ES + + K A I +K E++K EE +K +EE K+ + + +++ KK
Sbjct: 159 ESAKLLAYIKKKVHKHAEIISSKTEEEKKKEEEDKKKKEEEDKKKKEDEKKKEEEKKKEE 218
Query: 139 EEQLVQQQKSQEEI 152
E + + +K +EE+
Sbjct: 219 ENKKKEGEKKKEEV 232
Score = 33.1 bits (72), Expect = 0.57
Identities = 18/69 (26%), Positives = 40/69 (57%), Gaps = 3/69 (4%)
Query: 114 KTLQEETKQHQMRAQYQDQLAKKRYEEQLVQQQKSQEEILRKQEESVAKQEA---LRRAT 170
KT +E+ K+ + + + +++ KK+ +E+ +++K +EE +K+E K+E + T
Sbjct: 181 KTEEEKKKEEEDKKKKEEEDKKKKEDEKKKEEEKKKEEENKKKEGEKKKEEVKVEVTTKT 240
Query: 171 IEHEMELRE 179
I +E +E
Sbjct: 241 ITQVVEYKE 249
>At1g21810.1 68414.m02729 expressed protein
Length = 628
Score = 34.7 bits (76), Expect = 0.19
Identities = 43/199 (21%), Positives = 83/199 (41%), Gaps = 12/199 (6%)
Query: 42 MEAYRFDSSALERAASAAKELERSRHAKDALELSKLQESTRQQEQMAKIKEYEAAIEQAK 101
+E + + LER +E E+ + +LE+ + + E M K E E A +
Sbjct: 276 LEKIQAEKDDLEREVKCCREAEK----RLSLEIEAVVGDKMELEDMLKRVEAEKAELKTS 331
Query: 102 VEQKKVDYEERRKTLQE-ETKQHQMRAQYQDQLAK-----KRYEEQLVQQQKSQEEILRK 155
+ K Y+E R QE +TK +++A+ +D+L K E++ + ++ +
Sbjct: 332 FDVLKDKYQESRVCFQEVDTKLEKLQAE-KDELDSEVICCKEAEKRFSLELEAVVGDKIE 390
Query: 156 QEESVAKQEALRRATIEHEMELREKNKLXXXXXXXXXXXXXXXXNRDINLEQIRLKAAEN 215
E+ + K EA +A ++ ++ + R++ L AE+
Sbjct: 391 MEDELEKMEA-EKAELKISFDVIKDQYQESRVCFQEVEMKLEAMKRELKLANESKTQAES 449
Query: 216 RVTILESIKTAGSVVGSGL 234
RVT +E+ +V GL
Sbjct: 450 RVTRMEAEVRKERIVSDGL 468
>At5g65770.1 68418.m08276 nuclear matrix constituent protein-related
low similarity to nuclear matrix constituent protein 1
(NMCP1) [Daucus carota] GI:2190187
Length = 1042
Score = 34.3 bits (75), Expect = 0.25
Identities = 34/139 (24%), Positives = 65/139 (46%), Gaps = 17/139 (12%)
Query: 54 RAASAAKELERSRHAKDALELSKLQESTRQQEQMAKIKEYEAAIEQAKVEQKKVDYEERR 113
++ S E+E R A + E+ +Q+E + KE++ ++ + +K+ D E+
Sbjct: 400 KSKSVEVEIESKRRAWELREVD-----IKQREDLVGEKEHDLEVQSRALAEKEKDITEKS 454
Query: 114 KTLQEETKQ--------HQMRAQYQDQLAKKRYEEQLVQQQKSQEEILRKQEESVA-KQE 164
L E+ K ++ +D+ + R + +QQ + E RK+ +S K E
Sbjct: 455 FNLDEKEKNLVATEEDINRKTTMLEDEKERLRKLDLELQQSLTSLEDKRKRVDSATQKLE 514
Query: 165 ALRRATIE---HEMELREK 180
AL+ T E EM+L+E+
Sbjct: 515 ALKSETSELSTLEMKLKEE 533
Score = 33.5 bits (73), Expect = 0.43
Identities = 29/151 (19%), Positives = 67/151 (44%), Gaps = 7/151 (4%)
Query: 33 NLSKSERKAMEAYR-FDSSALERAASAA-KELERSRHAKDALELSKLQESTRQQEQMAKI 90
N S+ KA E + + ++ A KELE + L+ +L+ ++ + +
Sbjct: 668 NSSRDREKAFEQEKKLEEERIQSLKEMAEKELEHVQVELKRLDAERLEIKLDRERREREW 727
Query: 91 KEYEAAIEQAKVEQKKVDYEERRKTLQEETKQHQMRAQYQDQLAKKRYEEQLVQQQKSQE 150
E + ++E+ KV+++K++ + + + +H++ ++L K + + +
Sbjct: 728 AELKDSVEELKVQREKLETQRHMLRAERDEIRHEI-----EELKKLENLKVALDDMSMAK 782
Query: 151 EILRKQEESVAKQEALRRATIEHEMELREKN 181
L E S K AL++ + + EL +N
Sbjct: 783 MQLSNLERSWEKVSALKQKVVSRDDELDLQN 813
>At5g64910.1 68418.m08165 expressed protein ; expression supported
by MPSS
Length = 487
Score = 34.3 bits (75), Expect = 0.25
Identities = 25/109 (22%), Positives = 54/109 (49%), Gaps = 6/109 (5%)
Query: 80 STRQQEQMAKIKEYEAAIEQAKVEQKKVDYEERRKTLQEETKQHQMRAQYQ---DQLAKK 136
+T++ + + +E E +E E++ + EE + +EE + + +A + ++ AK+
Sbjct: 39 TTQETQPTQETEETEDKVESPAPEEEGKNEEEANENQEEEAAKVESKAAEEGGNEEEAKE 98
Query: 137 RYEEQ---LVQQQKSQEEILRKQEESVAKQEALRRATIEHEMELREKNK 182
EE+ ++ K +EE K +ES +++E + A+ R K K
Sbjct: 99 DKEEEKEEAAREDKEEEEEAVKPDESASQKEEAKGASSSEPQLRRGKRK 147
Score = 33.9 bits (74), Expect = 0.33
Identities = 28/135 (20%), Positives = 62/135 (45%), Gaps = 10/135 (7%)
Query: 44 AYRFDSSALERAASAAKE-LERSRHAKDALELSKLQESTRQQEQMAKIKEYEAAIEQAKV 102
A + D + +E + + + + +D +E +E + +E+ + +E EAA ++K
Sbjct: 27 ASKNDDAVVEATTTQETQPTQETEETEDKVESPAPEEEGKNEEEANENQEEEAAKVESKA 86
Query: 103 -------EQKKVDYEERRKTLQEETKQHQMRAQYQDQLAKKRYEEQLVQQQKSQEEILRK 155
E+ K D EE ++ E K+ + A D+ A ++ E+ S+ ++ R
Sbjct: 87 AEEGGNEEEAKEDKEEEKEEAAREDKEEEEEAVKPDESASQK--EEAKGASSSEPQLRRG 144
Query: 156 QEESVAKQEALRRAT 170
+ + K EA ++ +
Sbjct: 145 KRKRGTKTEAEKKVS 159
>At5g27120.1 68418.m03237 SAR DNA-binding protein, putative strong
similarity to SAR DNA-binding protein-1 [Pisum sativum]
GI:3132696; contains Pfam profile PF01798: Putative
snoRNA binding domain
Length = 533
Score = 34.3 bits (75), Expect = 0.25
Identities = 29/115 (25%), Positives = 55/115 (47%), Gaps = 10/115 (8%)
Query: 26 GVAAPSTNLSKSERKAMEAYRFDSSALERAASAAKELERSRHAKDALELSKLQESTRQQE 85
G+ P+ + + ++ DS E K+ ++ + A D E +K +E ++++
Sbjct: 427 GLITPAKTYNTAADSLLQTPTVDS---ENGVKEKKDKKKKKKADDEEE-AKTEEPSKKKS 482
Query: 86 QMAKIK-EYEAAIEQAKVEQKKVDYEERRKTLQEETKQHQMRAQYQDQLAKKRYE 139
K + E E A E AK E+KK +RK +EET+ + + ++ KK+ E
Sbjct: 483 NKKKTEAEPETAEEPAKKEKKK-----KRKHEEEETEMPAKKKEKSEKKKKKKTE 532
>At4g23800.1 68417.m03422 high mobility group (HMG1/2) family
protein similar to HMG2B [Homo sapiens] GI:32335;
contains Pfam profile PF00505: HMG (high mobility group)
box
Length = 456
Score = 34.3 bits (75), Expect = 0.25
Identities = 24/103 (23%), Positives = 59/103 (57%), Gaps = 8/103 (7%)
Query: 77 LQESTRQQEQMAKI--KEYEAAIEQAKVEQKKVDYEERRKTLQEETKQHQMRAQYQDQLA 134
L+E + ++AKI +E++ ++ K +KV + + LQ + R + ++ L+
Sbjct: 273 LREENKSVVEVAKITGEEWKNLSDKKKAPYEKVAKKNKETYLQ--AMEEYKRTKEEEALS 330
Query: 135 KKRYEEQLVQQQKSQE-EILRKQEES---VAKQEALRRATIEH 173
+K+ EE+L++ K + ++L+K+E++ + K++A ++ E+
Sbjct: 331 QKKEEEELLKLHKQEALQMLKKKEKTDNLIKKEKATKKKKNEN 373
>At4g20160.1 68417.m02949 expressed protein ; expression supported
by MPSS
Length = 1188
Score = 34.3 bits (75), Expect = 0.25
Identities = 33/136 (24%), Positives = 67/136 (49%), Gaps = 9/136 (6%)
Query: 43 EAYRFDSSALERAASAAKELERSRHA-KD---ALELSKLQESTRQQEQMAKIKEYEAAIE 98
E Y+ +S +E AS + R R KD A E LQE T ++ + +IKE +A+E
Sbjct: 349 EKYKANSENIETGASTSHASTRGRIMDKDPHKATEKKVLQE-TIEKSGVKEIKEVVSAVE 407
Query: 99 QAKVEQKKVDYEERRKTLQEETKQHQMRAQYQDQLAKKRYEEQLVQQQKSQ---EEILRK 155
AK + + E R L++ + + + + K+ +E+++ ++ + E+
Sbjct: 408 NAK-KGVLSEISENRNGLKKLAGETIQKETVEGKGEKRETKEKVISKESLEGKGEKREST 466
Query: 156 QEESVAKQEALRRATI 171
+E+++AK+ +A +
Sbjct: 467 KEKAIAKESVAEKALV 482
>At4g14330.1 68417.m02207 phragmoplast-associated kinesin-related
protein 2 (PAKRP2) identical to cDNA
phragmoplast-associated kinesin-related protein 2
(PAKRP2) GI:16973450
Length = 869
Score = 34.3 bits (75), Expect = 0.25
Identities = 25/99 (25%), Positives = 49/99 (49%), Gaps = 3/99 (3%)
Query: 60 KELERSRHAKDALELSKLQESTRQQEQMAKIKEYEAAIEQAKVEQKKVDYEERRKTLQEE 119
KE ER+ K +L K +E + +E A E+ E+ + + L ++
Sbjct: 411 KEKERNEAQK---QLKKKEEEVAALRSLLTQREACATNEEEIKEKVNERTQLLKSELDKK 467
Query: 120 TKQHQMRAQYQDQLAKKRYEEQLVQQQKSQEEILRKQEE 158
++ + A+ ++ ++R EE++VQQQ+ E + R+ EE
Sbjct: 468 LEECRRMAEEFVEMERRRMEERIVQQQEELEMMRRRLEE 506
>At4g00380.1 68417.m00052 XH/XS domain-containing protein / XS zinc
finger domain-containing protein contains Pfam domains
PF03469: XH domain, PF03468: XS domain and PF03470: XS
zinc finger domain
Length = 635
Score = 34.3 bits (75), Expect = 0.25
Identities = 37/150 (24%), Positives = 65/150 (43%), Gaps = 13/150 (8%)
Query: 40 KAMEAYRFDSSALERAASAAKELERSRHAKDALELSKLQESTRQQEQMAKIKEYEAAIEQ 99
KA +Y + +L+R K L H A E K+Q+ + + Q Y+ +
Sbjct: 273 KAQHSYNRTAMSLQRVLDEKKNL----HQAFAEETKKMQQMSLRHIQRIL---YDKEKLR 325
Query: 100 AKVEQKKVDYEERRKTLQEETKQHQMRAQYQDQLAKK----RYEEQLV--QQQKSQEEIL 153
++++K D E R K L++ ++ Q D+ +K QL +Q+K+ E +L
Sbjct: 326 NELDRKMRDLESRAKQLEKHEALTELERQKLDEDKRKSDAMNKSLQLASREQKKADESVL 385
Query: 154 RKQEESVAKQEALRRATIEHEMELREKNKL 183
R EE ++E + E +L K L
Sbjct: 386 RLVEEHQRQKEDALNKILLLEKQLDTKQTL 415
>At3g13200.1 68416.m01652 Cwf15 / Cwc15 cell cycle control family
protein contains Pfam profile PF04889: Cwf15/Cwc15 cell
cycle control protein; similar to Cell cycle control
protein cwf15 (Swiss-Prot:P78794) [Schizosaccharomyces
pombe]
Length = 230
Score = 34.3 bits (75), Expect = 0.25
Identities = 24/90 (26%), Positives = 45/90 (50%), Gaps = 3/90 (3%)
Query: 77 LQESTRQQEQMAKIKEYEAAIEQAKVEQKKVDYEERRKTLQEETKQHQMRAQYQDQLAKK 136
L++S R E+ + +A + + V+ K D + +E + A+ DQ+ K+
Sbjct: 92 LEDSKRDPEERIIPRSVDA--DDSDVDIKSDDDSDDESDDDDEDDTEALMAEL-DQIKKE 148
Query: 137 RYEEQLVQQQKSQEEILRKQEESVAKQEAL 166
R EE+L ++++ Q E L +EE + K L
Sbjct: 149 RVEERLRKEKEQQMEELNAKEEELLKGNPL 178
>At1g24290.1 68414.m03065 AAA-type ATPase family protein similar to
Werner helicase interacting protein [Homo sapiens]
GI:14349166; contains Pfam profiles PF00004: ATPase
family associated with various cellular activities
(AAA), PF00627: UBA/TS-N domain; contains
ATP/GTP-binding site motif A (P-loop)
Length = 525
Score = 34.3 bits (75), Expect = 0.25
Identities = 23/73 (31%), Positives = 35/73 (47%), Gaps = 4/73 (5%)
Query: 347 NLLMYGPPGTGKTLFSKKLAKHSGMD---YAIMTGGDVAPMGKDAVAAIHKVFDWANTSR 403
+++ +GPPGTGKT +K L +S D Y ++ V KD A+ R
Sbjct: 139 SIVFWGPPGTGKTSIAKSLI-NSSKDPSLYRFVSLSAVTSGVKDVRDAVESAKRLNLEGR 197
Query: 404 KGVLVFIDEADAF 416
K ++F+DE F
Sbjct: 198 KRTVLFMDEVHRF 210
>At5g17760.2 68418.m02083 AAA-type ATPase family protein contains
Pfam profile: ATPase family PF00004
Length = 341
Score = 33.9 bits (74), Expect = 0.33
Identities = 14/34 (41%), Positives = 20/34 (58%)
Query: 339 RLNKGFYRNLLMYGPPGTGKTLFSKKLAKHSGMD 372
R+ K + R L+YGPPGTGK+ +A + D
Sbjct: 247 RVGKAWKRGYLLYGPPGTGKSSLVAAMANYLKFD 280
>At5g17760.1 68418.m02082 AAA-type ATPase family protein contains
Pfam profile: ATPase family PF00004
Length = 505
Score = 33.9 bits (74), Expect = 0.33
Identities = 14/34 (41%), Positives = 20/34 (58%)
Query: 339 RLNKGFYRNLLMYGPPGTGKTLFSKKLAKHSGMD 372
R+ K + R L+YGPPGTGK+ +A + D
Sbjct: 247 RVGKAWKRGYLLYGPPGTGKSSLVAAMANYLKFD 280
>At5g17740.1 68418.m02080 AAA-type ATPase family protein h-bcs1,
Homo sapiens, EMBL:AF026849 h-bcs1, Homo sapiens,
EMBL:AF026849 h-bcs1, Homo sapiens, EMBL:AF026849
contains Pfam profile: ATPase family PF00004
gene_id:K17E7.100 contains Pfam profile: ATPase family
PF00004
Length = 533
Score = 33.9 bits (74), Expect = 0.33
Identities = 14/34 (41%), Positives = 20/34 (58%)
Query: 339 RLNKGFYRNLLMYGPPGTGKTLFSKKLAKHSGMD 372
R+ K + R L+YGPPGTGK+ +A + D
Sbjct: 239 RVGKAWKRGYLLYGPPGTGKSSLVAAMANYLKFD 272
>At4g37820.1 68417.m05351 expressed protein Kaposi's
sarcoma-associated herpes-like virus ORF73gene, Kaposi's
sarcoma-associated herpesvirus, U52064
Length = 532
Score = 33.9 bits (74), Expect = 0.33
Identities = 30/141 (21%), Positives = 67/141 (47%), Gaps = 6/141 (4%)
Query: 30 PSTNLSKSER-KAMEAYRFDSSALERAASAAKELERSRHAKDAL----ELSKLQESTRQQ 84
P TNLS S + E+ D S ++ ++ + K+ + E SK++ES + +
Sbjct: 260 PETNLSTSNATETTESSGSDESGSSGKSTGYQQTKNEEDEKEKVQSSEEESKVKESGKNE 319
Query: 85 EQMAKIKEYEAAIEQAKVEQKKVDYEERRKTLQEETKQHQMRAQYQDQLAKKRYEEQLVQ 144
+ + ++ E+ E+ + ++K+ + +E K+ + + Q++ ++ E + +
Sbjct: 320 KDASSSQD-ESKEEKPERKKKEESSSQGEGKEEEPEKREKEDSSSQEESKEEEPENKEKE 378
Query: 145 QQKSQEEILRKQEESVAKQEA 165
SQEE K+ E K+E+
Sbjct: 379 ASSSQEENEIKETEIKEKEES 399
>At4g25940.1 68417.m03731 epsin N-terminal homology (ENTH)
domain-containing protein contains Pfam PF01417: ENTH
domain. ENTH (Epsin N-terminal homology) domain; similar
to Chain B, Crystal Structure Of N-Terminal Domain Of
Drosophila Ap180 (GP:13399617) [Drosophila
melanogaster]; supporting cDNA
gi|20465326|gb|AY096427.1|
Length = 601
Score = 33.9 bits (74), Expect = 0.33
Identities = 26/114 (22%), Positives = 59/114 (51%), Gaps = 9/114 (7%)
Query: 53 ERAASAAKELERSRHAKDALELSK-LQESTRQQEQ---MAKIKEYEAAIEQAKVEQKKVD 108
+RA A+ L LEL++ Q T +Q +A +++Y Q+ QKK++
Sbjct: 269 KRAGQQAENLADFYEYCKGLELARNFQFPTLRQPPPSFLATMEDYIKEAPQSGSVQKKLE 328
Query: 109 YEERRKTLQEETK-QHQMR----AQYQDQLAKKRYEEQLVQQQKSQEEILRKQE 157
Y+E+ + QEE + +H ++ A+ +Q ++ L+++++ +E + +++
Sbjct: 329 YQEKEEEEQEEEEAEHSVQPEEPAEADNQKENSEGDQPLIEEEEEDQEKIEEED 382
>At4g25520.1 68417.m03680 transcriptional co-regulator family
protein contains similarity to GP|18033922|gb|AAL57277
SEUSS transcriptional co-regulator [Arabidopsis
thaliana]
Length = 748
Score = 33.9 bits (74), Expect = 0.33
Identities = 22/102 (21%), Positives = 50/102 (49%), Gaps = 8/102 (7%)
Query: 82 RQQEQMAKIKEYEAAIEQAKVEQKKVDYEERRKTLQEETKQHQMRAQY---QDQLAKKRY 138
+QQ+Q+ + + + ++ + VD + R + QE+ Q Q+ Q QD +
Sbjct: 72 QQQQQLLQQQTGQGSVPMRENSYSHVDKKPRLEVKQEDMLQQQILQQLIQRQDPTGRNPQ 131
Query: 139 EEQLVQQQKSQEEILRKQEESVAKQEALRRATIEHEMELREK 180
+ L+QQQ+ LR+ ++ + +R ++ + +LR++
Sbjct: 132 MQALLQQQR-----LRQHQQMLQSMSPSQRLQLQQQQQLRQQ 168
>At4g19190.1 68417.m02832 zinc knuckle (CCHC-type) family protein
contains Pfam domain, PF00098: Zinc knuckle
Length = 595
Score = 33.9 bits (74), Expect = 0.33
Identities = 31/149 (20%), Positives = 62/149 (41%), Gaps = 5/149 (3%)
Query: 31 STNLSKSERKAMEAYRFDSSALERAASAAKELERSRHAKDALELSKLQESTRQQEQMAKI 90
S K ++K+ + Y DS + E + S + L R RH K + L+ Q +
Sbjct: 353 SKKRKKLKKKSKKQYDSDSLSFEGSGSDSYRLSRRRHTKHVDPSASLKSEVYHQGNSHRE 412
Query: 91 KEYEAAIEQAKVEQKKVDYEERRKTLQEETKQHQMRAQYQDQLAKKRYEEQLVQQQKSQE 150
K Y E+ + ++ VD + + + R + + K + E+ +Q S +
Sbjct: 413 KHYYD--EKHQKRKEIVDRPSASSDDSDYYRSNSSRKKRSEDDYKSHHRER--KQVHSND 468
Query: 151 EILRK-QEESVAKQEALRRATIEHEMELR 178
+ K Q++ ++ ++R EH + R
Sbjct: 469 PVSEKSQKQHYSESGKIQRVEKEHRYDER 497
>At3g28600.1 68416.m03570 AAA-type ATPase family protein contains
Pfam profile: ATPase family PF00004
Length = 475
Score = 33.9 bits (74), Expect = 0.33
Identities = 14/37 (37%), Positives = 24/37 (64%), Gaps = 2/37 (5%)
Query: 339 RLNKGFYRNLLMYGPPGTGKTLFSKKLAKHSGMDYAI 375
++ K + R L++GPPGTGK+ +A H ++Y+I
Sbjct: 230 KIGKAWKRGYLLHGPPGTGKSTMIAAMANH--LNYSI 264
>At3g28570.1 68416.m03567 AAA-type ATPase family protein contains
Pfam profile: ATPase family PF00004
Length = 451
Score = 33.9 bits (74), Expect = 0.33
Identities = 19/59 (32%), Positives = 32/59 (54%), Gaps = 3/59 (5%)
Query: 339 RLNKGFYRNLLMYGPPGTGKTLFSKKLA---KHSGMDYAIMTGGDVAPMGKDAVAAIHK 394
R+ K + R L+YGPPGTGK+ +A K++ D + + G+ + K +A +K
Sbjct: 230 RIGKAWKRGYLLYGPPGTGKSTMIAAMANLMKYNIYDLELTSIGNNWELKKLLIATTNK 288
>At3g09620.1 68416.m01141 DEAD/DEAH box helicase, putative similar
to RNA helicase GB:A57514 GI:897915 from [Rattus
norvegicus]; contains Pfam profiles PF00270: DEAD/DEAH
box helicase, PF00271: Helicase conserved C-terminal
domain
Length = 989
Score = 33.9 bits (74), Expect = 0.33
Identities = 32/141 (22%), Positives = 67/141 (47%), Gaps = 8/141 (5%)
Query: 39 RKAMEAYRFDSSALERAASAAKELE-RSRHAKDALELSKLQESTRQQEQMAKIKEYEAAI 97
R+ ++ F+ ER + E + R R +D + K + R++ + +E E
Sbjct: 49 RRDRKSSDFEEEEYERDSKRRGEDKGRGRRERDR-DRGKYLKRDRERRE----REKEKGR 103
Query: 98 EQAKVEQKKVDYEERRKTLQEETKQHQM-RAQY-QDQLAKKRYEEQLVQQQKSQEEILRK 155
++ K E+ + D E ++ K+ + R+++ D + KK +EQ+ +QK E + K
Sbjct: 104 KKQKKERSREDCNEESDDVKCGLKRKRTERSRHGDDDVEKKTRDEQVEDEQKQLAEEVEK 163
Query: 156 QEESVAKQEALRRATIEHEME 176
+ V + + L+R E ++E
Sbjct: 164 RRRRVQEWQELKRQNEEAQIE 184
>At2g27170.1 68415.m06029 structural maintenance of chromosomes
(SMC) family protein similar to basement
membrane-associated chondroitin proteoglycan Bamacan
[Rattus norvegicus] GI:1785540; contains Pfam profile
PF02463: RecF/RecN/SMC N terminal domain. No suitalble
start codon was identified.
Length = 1207
Score = 33.9 bits (74), Expect = 0.33
Identities = 27/131 (20%), Positives = 60/131 (45%), Gaps = 8/131 (6%)
Query: 49 SSALERAASAAKELERSRHAKDALELSKLQESTRQQEQMAKIKEYEAAIEQAKVEQKKVD 108
+ ALE+ + +E++ S +A++ + ++ + +I E E + +Q +
Sbjct: 324 NDALEQLNTVEREMQDSLRELEAIKPLYESQVDKENQTSKRINELEKTLSILYQKQGRAT 383
Query: 109 YEERRKTLQEETKQHQMRAQYQDQLAKKRYEEQLVQQQKSQEEILRKQEESVAKQEALRR 168
+ + +R + +D K+ + VQ+QK Q+EILR + + E +++
Sbjct: 384 QFSNKAA-----RDKWLRKEIED--LKRVLDSNTVQEQKLQDEILRLNTDLTERDEHIKK 436
Query: 169 ATIE-HEMELR 178
+E E+E R
Sbjct: 437 HEVEIGELESR 447
>At2g18190.1 68415.m02116 AAA-type ATPase family protein contains
Pfam profile: ATPase family PF00004
Length = 494
Score = 33.9 bits (74), Expect = 0.33
Identities = 14/34 (41%), Positives = 20/34 (58%)
Query: 339 RLNKGFYRNLLMYGPPGTGKTLFSKKLAKHSGMD 372
R+ K + R L+YGPPGTGK+ +A + D
Sbjct: 238 RVGKAWKRGYLLYGPPGTGKSSLIAAMANYLKFD 271
>At2g04970.1 68415.m00518 hypothetical protein similar to At2g15200,
At1g32830, At2g14140, At3g30450, At4g03990, At5g34895,
At3g47270, At2g02200
Length = 808
Score = 33.9 bits (74), Expect = 0.33
Identities = 27/119 (22%), Positives = 55/119 (46%), Gaps = 1/119 (0%)
Query: 61 ELERSRHAKDALELSKLQESTRQQEQMAKIKEYEAAIEQAKVEQKKVDYEERRKTLQEET 120
E E+ E K+ R E K + + E+ + E++K + EE ++ +E+
Sbjct: 471 EEEKQEEEGKEEEEEKICVEYRGDEGTEKQEIPKQGDEEMEGEEEKQE-EEGKEEEEEKV 529
Query: 121 KQHQMRAQYQDQLAKKRYEEQLVQQQKSQEEILRKQEESVAKQEALRRATIEHEMELRE 179
+ + ++ K+ EE +++K +EE ++EE V K+E++ E E +E
Sbjct: 530 EYRGDEGTEKQEIPKQGDEEMEGEEEKQEEEGKEEEEEKVLKEESVEEHDEHDETEDQE 588
Score = 29.1 bits (62), Expect = 9.4
Identities = 22/113 (19%), Positives = 58/113 (51%), Gaps = 4/113 (3%)
Query: 72 LELSKLQESTRQQEQMAKIKEYEAAIEQAKVEQKKVDYEERRKTLQEETKQHQMRAQYQD 131
L + ++ S ++EQ + ++ E E+ + E K+ + E+ E T++ ++ Q +
Sbjct: 407 LGIERVPASYTREEQKEEDEKKEQEEEKQEEEGKEEELEKVEYRGDEGTEKQEIPKQGNE 466
Query: 132 QLAKKRYEEQLVQQQKSQEEIL--RKQEESVAKQEALRRATIEHEMELREKNK 182
++ + +++ +++ +E+I + +E KQE ++ + EME E+ +
Sbjct: 467 EMEGEEEKQEEEGKEEEEEKICVEYRGDEGTEKQEIPKQG--DEEMEGEEEKQ 517
>At1g56660.1 68414.m06516 expressed protein
Length = 522
Score = 33.9 bits (74), Expect = 0.33
Identities = 32/162 (19%), Positives = 81/162 (50%), Gaps = 13/162 (8%)
Query: 35 SKSERKAMEAYRFDSSALERAASAAKELERSRHAKDALELSKLQES---TRQQEQMAKIK 91
+K E+ ++ + E+ + E+E + + ++ K +ES +++ ++ K K
Sbjct: 8 AKEEKLHVKIKTQELDPKEKGENVEVEMEVKAKSIEKVKAKKDEESSGKSKKDKEKKKGK 67
Query: 92 EYEAAIEQAKVEQKKVDYEERRKTLQE-----ETKQHQMRAQYQDQLAKKRYE---EQLV 143
++ +++ K + KK D + K +E E K+ ++ + ++ KK E E+L
Sbjct: 68 NVDSEVKEDKDDDKKKDGKMVSKKHEEGHGDLEVKESDVKVEEHEKEHKKGKEKKHEELE 127
Query: 144 QQQKSQEEILRKQEESVAKQEALRRATIE--HEMELREKNKL 183
++++ +++ +K+++ +E ++A E HE +EK +L
Sbjct: 128 EEKEGKKKKNKKEKDESGPEEKNKKADKEKKHEDVSQEKEEL 169
Score = 33.1 bits (72), Expect = 0.57
Identities = 26/123 (21%), Positives = 64/123 (52%), Gaps = 4/123 (3%)
Query: 60 KELERSRHAKDALELSKLQESTRQQEQMAKIKEY-EAAIEQAKVEQKKVDYEERRKTLQE 118
KE ++ + K EL + +E +++ + K + E ++A E+K D + ++ L+E
Sbjct: 113 KEHKKGKEKKHE-ELEEEKEGKKKKNKKEKDESGPEEKNKKADKEKKHEDVSQEKEELEE 171
Query: 119 ETKQHQMRAQYQDQLAKKRYEEQLVQQQKSQEEILRKQEESV-AKQEALRRATIEHEMEL 177
E + + + +D+ + +++ +++K +EE +++ V K+E + +E E E
Sbjct: 172 EDGKKNKKKE-KDESGTEEKKKKPKKEKKQKEESKSNEDKKVKGKKEKGEKGDLEKEDEE 230
Query: 178 REK 180
++K
Sbjct: 231 KKK 233
Score = 32.3 bits (70), Expect = 1.0
Identities = 26/113 (23%), Positives = 57/113 (50%), Gaps = 8/113 (7%)
Query: 60 KELERSRHAKDALELSKLQESTRQQEQMAKIKEYEAAIEQAKVEQKKVDYE--ERRKTLQ 117
+E + ++ K + S +E ++ ++ K KE + E KV+ KK E + K +
Sbjct: 170 EEEDGKKNKKKEKDESGTEEKKKKPKKEKKQKEESKSNEDKKVKGKKEKGEKGDLEKEDE 229
Query: 118 EETKQH-----QMRAQYQDQLAKKRYEEQLVQQQKSQEEILRKQ-EESVAKQE 164
E+ K+H +M+ + + KK +E +++K + + +K+ +ES K++
Sbjct: 230 EKKKEHDETDQEMKEKDSKKNKKKEKDESCAEEKKKKPDKEKKEKDESTEKED 282
Score = 30.7 bits (66), Expect = 3.1
Identities = 27/130 (20%), Positives = 61/130 (46%), Gaps = 5/130 (3%)
Query: 57 SAAKELERSRHAKDALELSKLQES----TRQQEQMAKIKEYEAAIEQAKVEQKKVDYEER 112
S KE + KD +SK E +E K++E+E ++ K E+K + EE
Sbjct: 71 SEVKEDKDDDKKKDGKMVSKKHEEGHGDLEVKESDVKVEEHEKEHKKGK-EKKHEELEEE 129
Query: 113 RKTLQEETKQHQMRAQYQDQLAKKRYEEQLVQQQKSQEEILRKQEESVAKQEALRRATIE 172
++ +++ K+ + + +++ K E++ + +EE+ + + K+E T E
Sbjct: 130 KEGKKKKNKKEKDESGPEEKNKKADKEKKHEDVSQEKEELEEEDGKKNKKKEKDESGTEE 189
Query: 173 HEMELREKNK 182
+ + +++ K
Sbjct: 190 KKKKPKKEKK 199
Score = 30.7 bits (66), Expect = 3.1
Identities = 26/116 (22%), Positives = 59/116 (50%), Gaps = 7/116 (6%)
Query: 73 ELSKLQESTRQQEQMAKIK-----EYEAAIEQAKVEQKKVDYEERRKTLQEETKQHQMR- 126
E K +E ++++ +K++ E + ++ K + KK D +E + T EE K+ +
Sbjct: 402 EAEKKEEDDTEEKKKSKVEGGESEEGKKKKKKDKKKNKKKDTKEPKMTEDEEEKKDDSKD 461
Query: 127 AQYQDQLAKKRYEEQLVQQQKSQEEILRKQEESVAKQEALRRATIEHEMELREKNK 182
+ + AK+ +++ V+++K +I K + +AK + A +E + E+ + K
Sbjct: 462 VKIEGSKAKEEKKDKDVKKKKGGNDI-GKLKTKLAKIDEKIGALMEEKAEIENQIK 516
Score = 30.3 bits (65), Expect = 4.0
Identities = 28/150 (18%), Positives = 71/150 (47%), Gaps = 6/150 (4%)
Query: 35 SKSERKAMEAYRFDSSALERAASAAKELERSRHAKDALELSKLQESTRQQ--EQMAKIKE 92
S +E K + + E ++ K+++ + + +L K E +++ E ++KE
Sbjct: 185 SGTEEKKKKPKKEKKQKEESKSNEDKKVKGKKEKGEKGDLEKEDEEKKKEHDETDQEMKE 244
Query: 93 YEAAIEQAKVEQKKVDYEERRKTLQEETKQHQMRAQYQDQLAKKRYEEQLVQQQKSQEEI 152
++ + K E+ + EE++K +E K+ + +D+ K + + ++ +E+
Sbjct: 245 KDSK-KNKKKEKDESCAEEKKKKPDKEKKEKDESTEKEDKKLKGKKGKG---EKPEKEDE 300
Query: 153 LRKQEESVAKQEALRRATIEHEMELREKNK 182
+K +E A ++ + +H+ ++KNK
Sbjct: 301 GKKTKEHDATEQEMDDEAADHKEGKKKKNK 330
Score = 29.9 bits (64), Expect = 5.4
Identities = 25/113 (22%), Positives = 50/113 (44%), Gaps = 3/113 (2%)
Query: 52 LERAASAAKELERSRHAKDALELSKLQESTRQQEQMAKIKEYEAAIEQAKVEQKKVDYEE 111
LE S K E + K E K +E ++E K + E + + KK D E+
Sbjct: 99 LEVKESDVKVEEHEKEHKKGKE-KKHEELEEEKEGKKKKNKKEKDESGPEEKNKKADKEK 157
Query: 112 RRKTLQEETKQHQMRAQYQDQLAKKRYEEQLVQQQKSQEEILRKQEESVAKQE 164
+ + + +E + ++ + + KK +E +++K + + +KQ+E E
Sbjct: 158 KHEDVSQE--KEELEEEDGKKNKKKEKDESGTEEKKKKPKKEKKQKEESKSNE 208
Score = 29.9 bits (64), Expect = 5.4
Identities = 22/120 (18%), Positives = 55/120 (45%), Gaps = 3/120 (2%)
Query: 61 ELERSRHAKDALELSKLQESTRQQEQMAKIKEYEAAIEQAKVEQKKVDYEERRKTLQEET 120
E ++ ++ K + K ++ ++ ++ E E K+E+ + + +E T EE
Sbjct: 357 ETKQKKNKKKEKKSEKGEKDVKEDKKKENPLETEVMSRDIKLEEPEAEKKEEDDT--EEK 414
Query: 121 KQHQMRAQYQDQLAKKRYEEQLVQQQKSQEEILRKQEESVAKQEALRRATIEHEMELREK 180
K+ ++ ++ KK+ +++ ++K +E ++E K ++ + IE EK
Sbjct: 415 KKSKVEGGESEEGKKKKKKDKKKNKKKDTKEPKMTEDEEEKKDDS-KDVKIEGSKAKEEK 473
>At1g30330.1 68414.m03709 auxin-responsive factor (ARF6) identical
to ARF6 [Arabidopsis thaliana] GI:4102600 (Science 276
(5320), 1865-1868 (1997))
Length = 933
Score = 33.9 bits (74), Expect = 0.33
Identities = 26/103 (25%), Positives = 53/103 (51%), Gaps = 9/103 (8%)
Query: 55 AASAAKELERSRHAKDALELSKLQESTRQQEQMAKIKEYEAAIEQAKVEQKKVDYEERRK 114
AA+A +++ AK A L + Q S Q + + + +Q +Q+++
Sbjct: 441 AAAALQDMRGIDPAKAAASLLQFQNSPGFSMQSPSLVQPQMLQQQLSQQQQQLS------ 494
Query: 115 TLQEETKQHQMRAQYQDQLAKKRYEEQLVQQQKSQEEILRKQE 157
Q++ +Q Q+ Q Q QL++++ ++QL QQQ+ Q ++Q+
Sbjct: 495 --QQQQQQQQLSQQQQQQLSQQQ-QQQLSQQQQQQLSQQQQQQ 534
Score = 30.3 bits (65), Expect = 4.0
Identities = 14/52 (26%), Positives = 37/52 (71%), Gaps = 3/52 (5%)
Query: 113 RKTLQEETKQHQMRAQYQDQLAKKRYEEQLVQQQKSQEEILRKQEESVAKQE 164
++ L ++ +Q + Q Q QL++++ ++QL QQQ Q+++ ++Q++ +++Q+
Sbjct: 483 QQQLSQQQQQLSQQQQQQQQLSQQQ-QQQLSQQQ--QQQLSQQQQQQLSQQQ 531
Score = 29.5 bits (63), Expect = 7.1
Identities = 17/96 (17%), Positives = 45/96 (46%), Gaps = 1/96 (1%)
Query: 65 SRHAKDALELSKLQESTRQQEQMAKIKEYEAAIEQAKVEQKKVDYEERRKTLQEETKQHQ 124
S + ++ LQ+ QQ+Q ++ + + ++ +Q+++ +++++ Q++ +Q
Sbjct: 470 SMQSPSLVQPQMLQQQLSQQQQQLS-QQQQQQQQLSQQQQQQLSQQQQQQLSQQQQQQLS 528
Query: 125 MRAQYQDQLAKKRYEEQLVQQQKSQEEILRKQEESV 160
+ Q Q L + Q Q L +Q++ V
Sbjct: 529 QQQQQQAYLGVPETHQPQSQAQSQSNNHLSQQQQQV 564
Score = 29.5 bits (63), Expect = 7.1
Identities = 13/49 (26%), Positives = 32/49 (65%), Gaps = 2/49 (4%)
Query: 116 LQEETKQHQMRAQYQDQLAKKRYEEQLVQQQKSQEEILRKQEESVAKQE 164
+Q + Q Q+ Q Q +++ ++QL QQQ Q+++ ++Q++ +++Q+
Sbjct: 477 VQPQMLQQQLSQQQQQLSQQQQQQQQLSQQQ--QQQLSQQQQQQLSQQQ 523
>At1g22530.1 68414.m02814 SEC14 cytosolic factor family protein /
phosphoglyceride transfer family protein contains Pfam
PF00650 : CRAL/TRIO domain; contains Pfam PF03765 :
CRAL/TRIO, N-terminus; similar to SEC14-like protein 2
(Alpha-tocopherol associated protein) (TAP) (bTAP)
(Fragment) (SP:P58875) {Bos taurus}
Length = 683
Score = 33.9 bits (74), Expect = 0.33
Identities = 28/112 (25%), Positives = 53/112 (47%), Gaps = 6/112 (5%)
Query: 27 VAAPSTNLS--KSERKAMEAYRFDSSALERAASAAKELERSRHAKDAL-ELSKLQESTRQ 83
VA P T ++ K E A S + + A EL+ + K+AL EL +L
Sbjct: 53 VAVPETEVTAVKEEEVATGKEILQSESFKEEGYLASELQEAE--KNALAELKELVREALN 110
Query: 84 QEQMAKIKEYEAAIEQAKVEQKKVD-YEERRKTLQEETKQHQMRAQYQDQLA 134
+ + A +++ KVE+KK + EE+++ ++ E K + + +++ A
Sbjct: 111 KREFTAPPPPPAPVKEEKVEEKKTEETEEKKEEVKTEEKSLEAETKEEEKSA 162
>At5g60530.1 68418.m07590 late embryogenesis abundant
protein-related / LEA protein-related similar to late
embryogenesis abundant protein [Picea glauca] GI:1350543
Length = 439
Score = 33.5 bits (73), Expect = 0.43
Identities = 21/79 (26%), Positives = 42/79 (53%), Gaps = 1/79 (1%)
Query: 60 KELERSRHAKDALELSKLQESTRQQEQMAKIKEYEAAIEQAKVEQKKVDYEERRKTLQEE 119
KE E+ K A + K +E ++E+ K KE + ++ K+E++K D E + K +E+
Sbjct: 61 KEQEKKDKEKAAKD-KKEKEKKDKEEKEKKDKERKEKEKKDKLEKEKKDKERKEKERKEK 119
Query: 120 TKQHQMRAQYQDQLAKKRY 138
++ + + ++ A RY
Sbjct: 120 ERKAKEKKDKEESEAAARY 138
Score = 33.1 bits (72), Expect = 0.57
Identities = 23/90 (25%), Positives = 50/90 (55%), Gaps = 8/90 (8%)
Query: 82 RQQEQMAKIKEYEAAIEQAKVEQKKVDYEERRKTLQEETKQHQMRAQYQDQLAKKRYEEQ 141
+ +EQ K KE A + K E++K D EE+ K +E ++ + +D+L K++ +++
Sbjct: 59 KDKEQEKKDKEKAA---KDKKEKEKKDKEEKEKKDKERKEKEK-----KDKLEKEKKDKE 110
Query: 142 LVQQQKSQEEILRKQEESVAKQEALRRATI 171
++++ ++E K+++ + EA R I
Sbjct: 111 RKEKERKEKERKAKEKKDKEESEAAARYRI 140
Score = 29.1 bits (62), Expect = 9.4
Identities = 18/69 (26%), Positives = 39/69 (56%), Gaps = 4/69 (5%)
Query: 53 ERAASAAKELERSRHAKDALELSKLQESTRQQEQMAKIKEYEAAIEQAKVEQKKVDYEER 112
E+AA KE E+ KD E K + +++E+ K+++ + E+ + E+K+ + + +
Sbjct: 69 EKAAKDKKEKEK----KDKEEKEKKDKERKEKEKKDKLEKEKKDKERKEKERKEKERKAK 124
Query: 113 RKTLQEETK 121
K +EE++
Sbjct: 125 EKKDKEESE 133
>At5g57480.1 68418.m07183 AAA-type ATPase family protein contains
Pfam profile: PF00004 ATPase family
Length = 520
Score = 33.5 bits (73), Expect = 0.43
Identities = 13/34 (38%), Positives = 20/34 (58%)
Query: 339 RLNKGFYRNLLMYGPPGTGKTLFSKKLAKHSGMD 372
+ + + R L+YGPPGTGK+ +A + G D
Sbjct: 231 KTGRAWKRGYLLYGPPGTGKSSMIAAMANYLGYD 264
>At5g54410.1 68418.m06777 hypothetical protein
Length = 219
Score = 33.5 bits (73), Expect = 0.43
Identities = 26/113 (23%), Positives = 56/113 (49%), Gaps = 7/113 (6%)
Query: 41 AMEAYRFDSSALERAASAAKELERSRHAKDALELSKLQESTRQQEQMAKIKEYEAAIEQA 100
AME +R ++ +R + +R + KDA +L L T+ + K+K+ + ++A
Sbjct: 56 AMETFRRKTNEQKRLENE----KRKQALKDAKDLKDLTYKTKVEN---KLKKTQPEKDRA 108
Query: 101 KVEQKKVDYEERRKTLQEETKQHQMRAQYQDQLAKKRYEEQLVQQQKSQEEIL 153
+ E+K + E+++ +EE K + + KK+ + ++ ++EE L
Sbjct: 109 EEEEKDLTEEKKKDPTEEEEKDPTEEKKKEPAEEKKKDPTEEKKKDPAEEEEL 161
Score = 30.7 bits (66), Expect = 3.1
Identities = 24/109 (22%), Positives = 56/109 (51%), Gaps = 7/109 (6%)
Query: 76 KLQESTRQQEQMAKIKEYEAAIEQAKVEQKKVDYEERRKTLQE--ETKQHQMRAQYQDQL 133
KL+E T Q + A + + EQK+++ E+R++ L++ + K + + +++L
Sbjct: 41 KLREETLQSNEEAN--DAMETFRRKTNEQKRLENEKRKQALKDAKDLKDLTYKTKVENKL 98
Query: 134 AKKRYEEQLVQQQKSQEEILRKQEESVAKQEALRRATIEHEMELREKNK 182
K + E+ ++ +E+ L ++++ +E + T E + E E+ K
Sbjct: 99 KKTQPEKDRAEE---EEKDLTEEKKKDPTEEEEKDPTEEKKKEPAEEKK 144
>At5g43310.1 68418.m05293 COP1-interacting protein-related contains
similarity to COP1-Interacting Protein 7 (CIP7)
[Arabidopsis thaliana] GI:3327868
Length = 1237
Score = 33.5 bits (73), Expect = 0.43
Identities = 32/123 (26%), Positives = 58/123 (47%), Gaps = 11/123 (8%)
Query: 44 AYRFDSSALER---AASAAKEL---ERSRHAKDALELSKLQESTRQQEQMAKIKEYEAAI 97
A F S AL++ AA AK+L +SR +KDA + K R+ EA
Sbjct: 677 ALEFGSKALKKNSQAAGGAKKLVKDPKSRLSKDAADKRKAPGPIRKGRPTKMSPLDEARA 736
Query: 98 EQAKVEQKKVDYEERRKTLQEETKQ--HQMRAQYQDQLAKKRYE---EQLVQQQKSQEEI 152
K+ K D ++ +K +EE ++ ++ + Q ++A K + + Q+++++I
Sbjct: 737 RADKLRNFKADLQKMKKEKEEEDRKRIEALKIERQKRIASKSNSAVGQSQLPAQQTKKQI 796
Query: 153 LRK 155
L K
Sbjct: 797 LNK 799
>At5g17900.1 68418.m02099 expressed protein
Length = 435
Score = 33.5 bits (73), Expect = 0.43
Identities = 38/142 (26%), Positives = 66/142 (46%), Gaps = 14/142 (9%)
Query: 48 DSSALERAASAAKELERSRHAKDALELSKLQEST--RQQEQMAKIKEYEAAIEQ-----A 100
D ALE +E + R A++ L L+E +++E+ + EYE E A
Sbjct: 121 DEDALEERRRRIRE-KNLRRAQEEAALLPLEEEDEIQEEEEEEEESEYETDSEDDMPGIA 179
Query: 101 KVEQKKVDYEERRKTLQEETKQHQMRAQYQDQLAKKRYEEQLVQQQKSQEEILRKQEESV 160
++ V ER + E + + A ++LAK++ E++ ++ ++ E +RK EE +
Sbjct: 180 MIKPVFVPKAERDTIAERERLEAEEEAL--EELAKRKLEQRKLETKQIVVEEVRKDEE-I 236
Query: 161 AKQEALRRATI---EHEMELRE 179
K L A I E + EL E
Sbjct: 237 RKNILLEEANIGDVETDDELNE 258
>At5g08010.1 68418.m00932 expressed protein condensin subunit SMC4,
Drosophila melanogaster, EMBL:AF186472
Length = 566
Score = 33.5 bits (73), Expect = 0.43
Identities = 24/85 (28%), Positives = 38/85 (44%), Gaps = 2/85 (2%)
Query: 42 MEAYRFDSSALERAASAAKELERSRHAKDALELSKLQESTRQQEQMAKIKEYEAAIE--Q 99
+E RFD + + S+ E + ELS +IKE E A++ Q
Sbjct: 326 VERQRFDETVSNQERSSNSTPESGNYIVSPRELSLRLLGVINSCYEKRIKELENALQESQ 385
Query: 100 AKVEQKKVDYEERRKTLQEETKQHQ 124
KVEQ ++ EE++K L + H+
Sbjct: 386 RKVEQLVIESEEKKKPLSRIWETHE 410
>At5g03710.1 68418.m00331 hypothetical protein
Length = 81
Score = 33.5 bits (73), Expect = 0.43
Identities = 15/67 (22%), Positives = 40/67 (59%)
Query: 92 EYEAAIEQAKVEQKKVDYEERRKTLQEETKQHQMRAQYQDQLAKKRYEEQLVQQQKSQEE 151
E E E+ + E+++ + EE + +EE ++ + + +++ ++ EE+ ++++ +EE
Sbjct: 6 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 65
Query: 152 ILRKQEE 158
R++EE
Sbjct: 66 EDREREE 72
Score = 33.1 bits (72), Expect = 0.57
Identities = 14/71 (19%), Positives = 41/71 (57%)
Query: 91 KEYEAAIEQAKVEQKKVDYEERRKTLQEETKQHQMRAQYQDQLAKKRYEEQLVQQQKSQE 150
+E E E+ + E+++ + EE + +EE ++ + + +++ ++ EE+ ++++ +E
Sbjct: 6 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 65
Query: 151 EILRKQEESVA 161
E ++E + A
Sbjct: 66 EDREREERAFA 76
Score = 33.1 bits (72), Expect = 0.57
Identities = 13/67 (19%), Positives = 40/67 (59%)
Query: 98 EQAKVEQKKVDYEERRKTLQEETKQHQMRAQYQDQLAKKRYEEQLVQQQKSQEEILRKQE 157
E+ + E+++ + EE + +EE ++ + + +++ ++ EE+ ++++ +EE ++E
Sbjct: 6 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 65
Query: 158 ESVAKQE 164
E ++E
Sbjct: 66 EDREREE 72
Score = 31.9 bits (69), Expect = 1.3
Identities = 14/67 (20%), Positives = 38/67 (56%)
Query: 103 EQKKVDYEERRKTLQEETKQHQMRAQYQDQLAKKRYEEQLVQQQKSQEEILRKQEESVAK 162
E+++ + EE + +EE ++ + + +++ ++ EE+ ++++ +EE ++EE
Sbjct: 8 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEED 67
Query: 163 QEALRRA 169
+E RA
Sbjct: 68 REREERA 74
Score = 31.1 bits (67), Expect = 2.3
Identities = 12/68 (17%), Positives = 40/68 (58%)
Query: 98 EQAKVEQKKVDYEERRKTLQEETKQHQMRAQYQDQLAKKRYEEQLVQQQKSQEEILRKQE 157
E+ + E+++ + EE + +EE ++ + + +++ ++ EE+ ++++ +EE ++E
Sbjct: 7 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 66
Query: 158 ESVAKQEA 165
+ ++ A
Sbjct: 67 DREREERA 74
Score = 30.7 bits (66), Expect = 3.1
Identities = 14/66 (21%), Positives = 36/66 (54%)
Query: 117 QEETKQHQMRAQYQDQLAKKRYEEQLVQQQKSQEEILRKQEESVAKQEALRRATIEHEME 176
+EE ++ + + +++ ++ EE+ ++++ +EE ++EE ++E E E E
Sbjct: 7 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 66
Query: 177 LREKNK 182
RE+ +
Sbjct: 67 DREREE 72
Score = 30.3 bits (65), Expect = 4.0
Identities = 12/65 (18%), Positives = 38/65 (58%)
Query: 103 EQKKVDYEERRKTLQEETKQHQMRAQYQDQLAKKRYEEQLVQQQKSQEEILRKQEESVAK 162
E+++ + EE + +EE ++ + + +++ ++ EE+ ++++ +EE ++EE +
Sbjct: 6 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 65
Query: 163 QEALR 167
++ R
Sbjct: 66 EDRER 70
Score = 29.9 bits (64), Expect = 5.4
Identities = 13/67 (19%), Positives = 38/67 (56%)
Query: 85 EQMAKIKEYEAAIEQAKVEQKKVDYEERRKTLQEETKQHQMRAQYQDQLAKKRYEEQLVQ 144
E+ + +E E E+ + E+++ + EE + +EE ++ + + +++ ++ EE+ +
Sbjct: 6 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 65
Query: 145 QQKSQEE 151
+ + +EE
Sbjct: 66 EDREREE 72
Score = 29.5 bits (63), Expect = 7.1
Identities = 12/65 (18%), Positives = 37/65 (56%)
Query: 104 QKKVDYEERRKTLQEETKQHQMRAQYQDQLAKKRYEEQLVQQQKSQEEILRKQEESVAKQ 163
+++ + EE + +EE ++ + + +++ ++ EE+ ++++ +EE ++EE ++
Sbjct: 6 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 65
Query: 164 EALRR 168
E R
Sbjct: 66 EDRER 70
>At4g30250.1 68417.m04301 AAA-type ATPase family protein contains
Pfam profile: ATPase family PF00004
Length = 512
Score = 33.5 bits (73), Expect = 0.43
Identities = 13/34 (38%), Positives = 20/34 (58%)
Query: 339 RLNKGFYRNLLMYGPPGTGKTLFSKKLAKHSGMD 372
+ + + R L+YGPPGTGK+ +A + G D
Sbjct: 232 KTGRAWKRGYLLYGPPGTGKSSLIAAMANYLGYD 265
>At4g27500.1 68417.m03950 expressed protein non-consensus GA donor
splice site at exon 6
Length = 612
Score = 33.5 bits (73), Expect = 0.43
Identities = 26/126 (20%), Positives = 62/126 (49%), Gaps = 7/126 (5%)
Query: 56 ASAAKELERSRHAKDALELSKLQESTRQQEQMAKIKEYEAAIEQAKVEQKKVDYEERRKT 115
A+ AKE+ + E++K +++ +++++A+ +AAI K +KK E+ +K
Sbjct: 468 AATAKEMRKQE------EIAKAKQAMERKKKLAEKAAAKAAIRAQKEAEKKEKKEQEKKA 521
Query: 116 LQEETKQHQMRAQYQDQLAKKRYEEQLVQQQKSQEEILRKQEESVAKQEALRRATIEHEM 175
++ + + + +++ E VQ++K Q+E + K++ + TI +
Sbjct: 522 KKKTGGNTETETEEVPEASEEEIEAP-VQEEKPQKEKVFKEKPIRNRTRGRGPETIPRAI 580
Query: 176 ELREKN 181
R+K+
Sbjct: 581 LKRKKS 586
>At3g61260.1 68416.m06856 DNA-binding family protein / remorin
family protein similar to DNA-binding protein gi|601843
[Arabidopsis thaliana], remorin [Solanum tuberosum]
GI:1881585; contains Pfam profiles PF03763: Remorin
C-terminal region, PF03766: Remorin N-terminal region
Length = 212
Score = 33.5 bits (73), Expect = 0.43
Identities = 28/125 (22%), Positives = 60/125 (48%), Gaps = 8/125 (6%)
Query: 48 DSSALERAASAAKELERSRHAKDALELSKLQESTRQQEQMAKIKEYEAAIEQAKVEQKKV 107
DS AL +E ++ A +L+ ++++++ ++ +E + E++K E K
Sbjct: 65 DSKALTVVEKPVEEPAPAKPASASLDRDVKLADLSKEKRLSFVRAWEES-EKSKAENKA- 122
Query: 108 DYEERRKTLQEETKQHQMRAQYQDQLAKKRYEEQLVQQQKSQEEILRKQEESVAKQEALR 167
+K ++ +A + QL K+ EEQL +++ E ++ + ++ K+ R
Sbjct: 123 ----EKKIADVHAWENSKKAAVEAQL--KKIEEQLEKKKAEYAERMKNKVAAIHKEAEER 176
Query: 168 RATIE 172
RA IE
Sbjct: 177 RAMIE 181
>At3g15950.1 68416.m02017 DNA topoisomerase-related similar to DNA
topoisomerase IV subunit A (GI:26454107) [Mycoplasma
penetrans]
Length = 772
Score = 33.5 bits (73), Expect = 0.43
Identities = 35/130 (26%), Positives = 57/130 (43%), Gaps = 11/130 (8%)
Query: 53 ERAASAAKELERSRHAKDALELSKLQESTRQQEQMAKIKEYEAAIEQAKVEQKKVDYEER 112
E AA K LE +A Q T Q + + ++A Q+ +++ + D+E
Sbjct: 143 EEAARRHKMLEAIEREFEAAHAGFEQLKTDDSAQ--GLDDEQSAKRQSMLDEIERDFEAA 200
Query: 113 RKTLQEETKQHQMRAQYQDQLAKKRYEEQLVQQQKSQEEILRKQEESVAKQEALRRATIE 172
K L+ Q++A D L EE ++QK EEI R+ EE+ E LR +T
Sbjct: 201 TKGLE------QLKA---DDLTGINDEEHAAKRQKMLEEIEREFEEATKGLEELRHSTSS 251
Query: 173 HEMELREKNK 182
+ E + +
Sbjct: 252 TDDEAQSAKR 261
>At3g05060.1 68416.m00549 SAR DNA-binding protein, putative strong
similarity to SAR DNA-binding protein-1 [Pisum sativum]
GI:3132696; contains Pfam profile PF01798: Putative
snoRNA binding domain
Length = 533
Score = 33.5 bits (73), Expect = 0.43
Identities = 24/102 (23%), Positives = 54/102 (52%), Gaps = 4/102 (3%)
Query: 35 SKSERKAMEAYRFDSSALERAASAAKELERSRHAKDALELSKLQESTRQQEQMAKIKEYE 94
+K+ A ++ ++SA S K+ ++ + ++ E + +E + ++++ E E
Sbjct: 433 AKTYNTAADSLLGETSAKSEEPSKKKDKKKKKKVEE--EKPEEEEPSEKKKKKKAEAETE 490
Query: 95 AAIEQAKVEQKKVDYEERRKTLQEETKQHQMRAQYQDQLAKK 136
A +E AK E+KK +++RK +EET + + + + + KK
Sbjct: 491 AVVEVAKEEKKK--NKKKRKHEEEETTETPAKKKDKKEKKKK 530
>At2g16640.1 68415.m01910 chloroplast outer membrane protein,
putative similar to chloroplast protein import component
Toc159 [Pisum sativum] GI:8489806, chloroplast outer
envelope protein 86 [Pisum sativum] GI:599958,
GTP-binding protein [Pisum sativum] GI:576509
Length = 1206
Score = 33.5 bits (73), Expect = 0.43
Identities = 24/96 (25%), Positives = 51/96 (53%), Gaps = 3/96 (3%)
Query: 80 STRQQEQMAKIKEYEAAIEQAKVEQKKVD-YEERRKTLQEETKQHQMRAQYQDQLAKKRY 138
S + +E +A++ + IE+ + +VD +EER +Q E + + ++Q +KR
Sbjct: 195 SPKNKEVVAEVIPKDDGIEEPWNDGIEVDNWEERVDGIQTEQEVEEGEGTTENQF-EKRT 253
Query: 139 EEQLVQQQKSQEEILRKQ-EESVAKQEALRRATIEH 173
EE++V+ + + + + KQ E+ V + E + E+
Sbjct: 254 EEEVVEGEGTSKNLFEKQTEQDVVEGEGTSKDLFEN 289
>At2g03150.1 68415.m00268 ATP/GTP-binding protein family contains
ATP/GTP-binding site motif A (P-loop), PROSITE:PS00017
Length = 1340
Score = 33.5 bits (73), Expect = 0.43
Identities = 25/95 (26%), Positives = 45/95 (47%), Gaps = 2/95 (2%)
Query: 24 GVGVAAPSTNLSKSERKAMEAYRFDSSALERAASAAKELERSRHAKDALELSKLQESTRQ 83
G G A +L K +R A FD ER + ++ R + E + +E R+
Sbjct: 331 GTGAAPRVDDLRKGDR-ASYLREFDLREEERRREDQRARDKEREREREREHDRERERQRE 389
Query: 84 QE-QMAKIKEYEAAIEQAKVEQKKVDYEERRKTLQ 117
+E Q A+ +E E +E+ + E++ ER++ L+
Sbjct: 390 RERQRARDRERERILERREKERQGERERERKRALE 424
>At1g72390.1 68414.m08373 expressed protein
Length = 1088
Score = 33.5 bits (73), Expect = 0.43
Identities = 13/58 (22%), Positives = 36/58 (62%)
Query: 107 VDYEERRKTLQEETKQHQMRAQYQDQLAKKRYEEQLVQQQKSQEEILRKQEESVAKQE 164
++ +++++ LQ++ +Q Q++ Q Q Q + +QL Q + Q+++ + ++ A+Q+
Sbjct: 921 MNQQQQQQQLQQQPQQQQLQHQQQLQQPMSQPSQQLAQSPQQQQQLQQHEQPQQAQQQ 978
Score = 31.1 bits (67), Expect = 2.3
Identities = 12/64 (18%), Positives = 38/64 (59%)
Query: 103 EQKKVDYEERRKTLQEETKQHQMRAQYQDQLAKKRYEEQLVQQQKSQEEILRKQEESVAK 162
+Q+++ + +++ LQ + + Q +Q QLA+ ++Q +QQ + ++ ++Q+ + +
Sbjct: 926 QQQQLQQQPQQQQLQHQQQLQQPMSQPSQQLAQSPQQQQQLQQHEQPQQAQQQQQATASP 985
Query: 163 QEAL 166
+++
Sbjct: 986 LQSV 989
>At1g43910.1 68414.m05066 AAA-type ATPase family protein contains
Pfam profile: ATPase family PF00004
Length = 475
Score = 33.5 bits (73), Expect = 0.43
Identities = 28/92 (30%), Positives = 44/92 (47%), Gaps = 11/92 (11%)
Query: 340 LNKGFYRNLLMYGPPGTGKTLFSKKLAKHSGMDYAIMTGGDVAPMGKDAVAAIHKVFDWA 399
+ + + R L+YGPPGTGK+ +A H M Y I D+ + ++
Sbjct: 234 VGRAWKRGYLLYGPPGTGKSSMVAAIANH--MKYHIY---DLQIQSVRDDGELREIL--T 286
Query: 400 NTSRKGVLVFID---EADAFLRKRSSEKISED 428
+T + +L+ D ADA R+R S+K ED
Sbjct: 287 STKNRSILLIEDIDCGADA-SRRRQSKKKEED 317
>At1g12150.1 68414.m01407 expressed protein contains Pfam profile
PF05701: Plant protein of unknown function (DUF827);
expression supported by MPSS
Length = 548
Score = 33.5 bits (73), Expect = 0.43
Identities = 44/192 (22%), Positives = 79/192 (41%), Gaps = 13/192 (6%)
Query: 34 LSKSERKAMEAYRFDSSALERAASAAKELERSRHAKDALELSKLQESTRQQEQMAKIKEY 93
L E K +EA + +S LE+ + A E +A +++ ES +++ + A I
Sbjct: 353 LEIEETKKLEALKQESLKLEQMKTEAIEARN-----EAANMNRKIESLKKETEAAMIAAE 407
Query: 94 EAAIEQAKVEQKKVDYEERRKTLQEETKQHQMRAQYQDQLAKKRYEEQLVQQQKSQEEIL 153
EA + ++E + EE + EE + +M+ Q Q +KK+ EE + K +
Sbjct: 408 EA---EKRLELVIREVEEAKSA--EEKVREEMKMISQKQESKKQDEESSGSKIKITIQEF 462
Query: 154 RKQEESVAKQEAL---RRATIEHEMELREKNKLXXXXXXXXXXXXXXXXNRDINLEQIRL 210
+ + EA + ATI E+E K + + L Q
Sbjct: 463 ESLKRGAGETEAAIEKKLATIAAELEEINKRRAEADNKLEANLKAIEEMKQATELAQKSA 522
Query: 211 KAAENRVTILES 222
++AE ++ES
Sbjct: 523 ESAEAAKRMVES 534
>At5g67630.1 68418.m08527 DNA helicase, putative similar to
RuvB-like DNA helicase reptin [Danio rerio] GI:27733814,
reptin [Drosophila melanogaster] GI:7243682
Length = 469
Score = 33.1 bits (72), Expect = 0.57
Identities = 16/53 (30%), Positives = 30/53 (56%), Gaps = 2/53 (3%)
Query: 346 RNLLMYGPPGTGKTLFSKKLAKHSGMD--YAIMTGGDVAPMGKDAVAAIHKVF 396
R +L+ G PGTGKT + +AK G++ +A++ G ++ + A+ + F
Sbjct: 67 RAILIAGQPGTGKTAIAMGMAKSLGLETPFAMIAGSEIFSLEMSKTEALTQSF 119
>At5g62410.1 68418.m07832 SMC2-like condensin, putative (SMC2)
(TITAN3) very strong similarity to SMC2-like condensin
(TITAN3) [Arabidopsis thaliana] GI:14279543; contains
Pfam profiles PF02483: SMC family C-terminal domain,
PF02463: RecF/RecN/SMC N terminal domain
Length = 1175
Score = 33.1 bits (72), Expect = 0.57
Identities = 26/104 (25%), Positives = 51/104 (49%), Gaps = 4/104 (3%)
Query: 60 KELERSRHAKDALELSKLQESTRQQEQMAKIKE--YEAAIEQ-AKVEQKKVDYEERRKTL 116
K E++ H K + KL+E + + K KE Y+ + +K+E D+++ R+
Sbjct: 729 KRAEQNEHHKLGEAVKKLEEELEEAKSQIKEKELAYKNCFDAVSKLENSIKDHDKNREGR 788
Query: 117 QEETKQHQMRAQYQDQLAKKRYEEQLVQQQK-SQEEILRKQEES 159
++ +++ + Q Q A K + +++K EE KQE+S
Sbjct: 789 LKDLEKNIKTIKAQMQAASKDLKSHENEKEKLVMEEEAMKQEQS 832
>At5g48600.1 68418.m06011 structural maintenance of chromosomes
(SMC) family protein similar to SP|P50532 Chromosome
assembly protein XCAP-C {Xenopus laevis}; contains Pfam
profiles PF02483: SMC family C-terminal domain, PF02463:
RecF/RecN/SMC N terminal domain
Length = 1241
Score = 33.1 bits (72), Expect = 0.57
Identities = 29/106 (27%), Positives = 54/106 (50%), Gaps = 13/106 (12%)
Query: 56 ASAAKELERSRHAKDALELSKLQE-----STRQQEQMAKIKEYEAAIEQAKVEQKKVDYE 110
AS+ EL +H + Q+ STR++E+ A + +A +++KK +
Sbjct: 444 ASSESELLSKKHEAALKAFTDAQKQLSDISTRKKEKAAATTSW-----KADIKKKKQEAI 498
Query: 111 ERRKTLQEETKQHQMRAQYQDQLAKKRYEE--QLVQQQKSQEEILR 154
E RK ++EE+ + Q Q+Q A+++ E + +KSQ E+L+
Sbjct: 499 EARK-VEEESLKEQETLVPQEQAAREKVAELKSAMNSEKSQNEVLK 543
Score = 33.1 bits (72), Expect = 0.57
Identities = 27/107 (25%), Positives = 54/107 (50%), Gaps = 4/107 (3%)
Query: 58 AAKELERSRHAKDALELSKLQESTRQQEQMAKIKEYEAAIEQAK--VEQKKVDYEERRKT 115
A +E ER K+ L ++ + + E K+ + I++ K + K DYE +K+
Sbjct: 886 ATREKERLEGEKENLHVTFKDITQKAFEIQETYKKTQQLIDEHKDVLTGAKSDYENLKKS 945
Query: 116 LQEETKQHQMRAQYQDQLAKKRYEEQLVQQQKSQEEILRKQEESVAK 162
+ +E K ++ A+++ Q KK+Y E L ++K ++ L + + K
Sbjct: 946 V-DELKASRVDAEFKVQDMKKKYNE-LEMREKGYKKKLNDLQIAFTK 990
Score = 31.9 bits (69), Expect = 1.3
Identities = 26/98 (26%), Positives = 51/98 (52%), Gaps = 11/98 (11%)
Query: 76 KLQESTRQQEQMAKIKEYEAAIEQAKVEQKKV-DYEERRKTLQEETKQHQMRAQYQDQLA 134
KL ++ + E ++K ++EAA++ QK++ D R+K T ++ +
Sbjct: 440 KLDVASSESELLSK--KHEAALKAFTDAQKQLSDISTRKKEKAAAT------TSWKADIK 491
Query: 135 KKRYEEQLVQQQKSQEEILRKQEESVAKQEALRRATIE 172
KK+ E ++ +K +EE L++QE V +++A R E
Sbjct: 492 KKKQEA--IEARKVEEESLKEQETLVPQEQAAREKVAE 527
>At5g33393.1 68418.m03983 hypothetical protein
Length = 435
Score = 33.1 bits (72), Expect = 0.57
Identities = 24/65 (36%), Positives = 30/65 (46%), Gaps = 3/65 (4%)
Query: 73 ELSKLQESTRQQEQMAKIKEYEAAIEQAKVEQKKVDYEERRKTLQEETKQHQMRAQYQDQ 132
EL L+ES R IKE E E K+E++ E +KTL+EE K M
Sbjct: 84 ELKALKESLRTPINQQAIKEEE---ETKKLEEETKKLEVEKKTLEEEKKFDLMFCNGDSL 140
Query: 133 LAKKR 137
AK R
Sbjct: 141 FAKTR 145
>At5g16790.1 68418.m01966 expressed protein
Length = 233
Score = 33.1 bits (72), Expect = 0.57
Identities = 30/133 (22%), Positives = 65/133 (48%), Gaps = 8/133 (6%)
Query: 54 RAASAAKELERSRHAKDALELSKLQESTRQQEQMAK--IKEYEA----AIEQAKVEQKKV 107
R K+L++ + +EL K +++ + ++AK ++E A ++ V +
Sbjct: 43 RGEPPLKKLQK-KFTSFVIELDKEEDNYSECGRLAKAFLQELSAFEIPLLKSQVVVAANL 101
Query: 108 DYEERRKTLQEETKQHQMRAQYQDQLAKKRYEEQLVQQQKSQE-EILRKQEESVAKQEAL 166
+E L++ET + M+AQ + KK+ EE +++Q+ +E E +RK + +
Sbjct: 102 REKENFNELKDETNRQIMQAQADIEDLKKQLEESKIERQQKEECEAIRKLISAQPPRSET 161
Query: 167 RRATIEHEMELRE 179
++ E + E+ E
Sbjct: 162 QKVIHELKKEIAE 174
>At4g21020.1 68417.m03041 late embryogenesis abundant
domain-containing protein / LEA domain-containing
protein low similarity to SP|P23283 Desiccation-related
protein {Craterostigma plantagineum}; contains Pfam
profile PF02987: Late embryogenesis abundant protein
Length = 266
Score = 33.1 bits (72), Expect = 0.57
Identities = 38/153 (24%), Positives = 62/153 (40%), Gaps = 7/153 (4%)
Query: 26 GVAAPSTNLSKSERKAMEAYRFDSSALERAASAAKELERSRHAKDALELSKLQESTRQQ- 84
G+ AP+T L+ S RK F +S + + R A A K +E T +
Sbjct: 20 GIKAPAT-LAASSRKVSRIC-FATSVSQNEGRDPLDNARDSRADSAYGSKKWREDTGEYY 77
Query: 85 EQMAKIKEYEAAIEQAKVEQKKVDYEERRKTLQEETKQHQMRAQYQDQLAKKRYEEQLVQ 144
Q AK K E A +K K + +E+ K ETK+ Y + K Y E+
Sbjct: 78 AQAAKDKANEGA---SKAADKAYETKEQAKDKAYETKEKAKDTAYNAKEKAKDYAERTKD 134
Query: 145 Q-QKSQEEILRKQEESVAKQEALRRATIEHEME 176
+ + + K E++ K + T+++ E
Sbjct: 135 KVNEGAYKAADKAEDTKEKAKDYAEDTMDNAKE 167
>At4g13540.1 68417.m02111 expressed protein
Length = 210
Score = 33.1 bits (72), Expect = 0.57
Identities = 31/148 (20%), Positives = 67/148 (45%), Gaps = 11/148 (7%)
Query: 35 SKSERKAMEAYRFDSSALERAASAAKELERSRHAKDALELSKLQ---ESTRQQEQMAKIK 91
SK ER + + + +R +EL+ AL++++ + E R +E++ +++
Sbjct: 6 SKDERNSSKRRIKVKANEQRRRETRRELDEKERVILALKMAETEWRKERKRLREEVKRLR 65
Query: 92 EYEAAIEQAKVEQKKVDYEERRKTLQEETKQHQMRAQYQDQLAKKRYEEQLVQ------- 144
+ E+ K +Q + ++ + L+ ++ + Q A K + L+
Sbjct: 66 QKMEEKEEGKAKQHEWEWVVEQMCLERAVREEAVERWKQLYFAIKNELDDLIHTTYGEAL 125
Query: 145 QQKSQEEILRKQEESVAKQEALRRATIE 172
+QK QEE+ + +E + K+ R TIE
Sbjct: 126 RQKPQEEVAKAVQE-LRKEVKARGETIE 152
>At4g10790.1 68417.m01759 UBX domain-containing protein low
similarity to SP|Q9UNN5 FAS-associated factor 1 (FAF1
protein) {Homo sapiens}; contains Pfam profile PF00789:
UBX domain
Length = 480
Score = 33.1 bits (72), Expect = 0.57
Identities = 28/118 (23%), Positives = 51/118 (43%), Gaps = 3/118 (2%)
Query: 68 AKDALELSKLQESTRQQEQMAKIKEYEAAIEQAKVEQKKVDYEERRKTLQ--EETKQHQM 125
A + L + E + E+M I + + +V+ EERR L+ EE
Sbjct: 271 ANQRIALLQQVEGPKSPEEMLAILQRIVEDSSPTLVTARVEAEERRTNLRLREEQDAAYR 330
Query: 126 RAQYQDQLAKKRYEEQLVQQQKSQEEILRK-QEESVAKQEALRRATIEHEMELREKNK 182
A DQ +++ +E+ + ++ E RK +EE A++ A R A +R + +
Sbjct: 331 AALEADQAREQQRQEEKERLEREAAEAERKLKEEEEARERAAREAEERQAARVRMRQE 388
Score = 31.5 bits (68), Expect = 1.8
Identities = 29/114 (25%), Positives = 51/114 (44%), Gaps = 2/114 (1%)
Query: 28 AAPSTNLSKSERKAMEAYRFDSSALERAASAAKELE-RSRHAKDALELSKLQESTRQQEQ 86
AA + ++ +++ E R + A E +E E R R A++A E + RQ++
Sbjct: 331 AALEADQAREQQRQEEKERLEREAAEAERKLKEEEEARERAAREAEERQAARVRMRQEKA 390
Query: 87 MAKIKEYEAAIEQAKVEQKKVDYEERRKTLQEETKQHQMRAQYQDQLAKKRYEE 140
+A +E E + +V + + E + + + ETK Q Y D L EE
Sbjct: 391 LALGEEPEKGPDVTQVLVRFPNGERKGRMFKSETK-IQTLYDYVDSLGLLDTEE 443
>At3g58660.1 68416.m06538 60S ribosomal protein-related contains
weak similarity to 60S ribosomal protein L10A (CSA-19)
(NEDD-6) (Swiss-Prot:P53026) [Mus musculus]
Length = 446
Score = 33.1 bits (72), Expect = 0.57
Identities = 18/91 (19%), Positives = 48/91 (52%)
Query: 75 SKLQESTRQQEQMAKIKEYEAAIEQAKVEQKKVDYEERRKTLQEETKQHQMRAQYQDQLA 134
S+ ++ +++++++++ E E +++A + K D E+ K + + + Q
Sbjct: 342 SEEKKMKKRKKEVSEVAESEKPMKKAAKGKLKPDVEKPMKKAAKGKSKPDVEKPMQKAAV 401
Query: 135 KKRYEEQLVQQQKSQEEILRKQEESVAKQEA 165
K + + +V+ +KS++ + K+ VAK E+
Sbjct: 402 KGKVKPDVVKLEKSKDGLKAKKTTMVAKDES 432
>At3g28610.1 68416.m03571 AAA-type ATPase family protein contains
Pfam profile: ATPase family PF00004
Length = 473
Score = 33.1 bits (72), Expect = 0.57
Identities = 30/107 (28%), Positives = 49/107 (45%), Gaps = 12/107 (11%)
Query: 325 EQRLRDIAIATKNT----RLNKGFYRNLLMYGPPGTGKTLFSKKLAKHSGMDYAIMTGGD 380
EQ L D+A ++ K + R L+YGPPGTGK+ +A + ++Y+I D
Sbjct: 212 EQILNDLAAFNNGKDYYKKIGKAWKRGYLLYGPPGTGKSTMIAAMA--NLLNYSIY---D 266
Query: 381 VAPMGKDAVAAIHKVFDWANTSRKGVLVFIDEADAFLRKRSSEKISE 427
+ + + K+ TS K ++V I++ D L K E
Sbjct: 267 LELTAIQNNSELRKIL--TATSNKSIIV-IEDIDCSLDLTGKRKKKE 310
>At3g28510.1 68416.m03561 AAA-type ATPase family protein contains
Pfam profile: PF00004 ATPase family
Length = 530
Score = 33.1 bits (72), Expect = 0.57
Identities = 14/55 (25%), Positives = 36/55 (65%)
Query: 77 LQESTRQQEQMAKIKEYEAAIEQAKVEQKKVDYEERRKTLQEETKQHQMRAQYQD 131
L+E + ++A+ +E + A ++AK +K + EE++K +E+ K+ +++A+ ++
Sbjct: 457 LEEEKEKARKLAEEEEKKKAEKEAKKMKKAEEAEEKKKKTEEDEKKEKVKAKEEN 511
Score = 29.9 bits (64), Expect = 5.4
Identities = 13/37 (35%), Positives = 22/37 (59%), Gaps = 2/37 (5%)
Query: 339 RLNKGFYRNLLMYGPPGTGKTLFSKKLAKHSGMDYAI 375
++ K + R L++GPPGTGK+ +A +DY +
Sbjct: 237 KVGKPWKRGYLLFGPPGTGKSTMIAAIANF--LDYDV 271
>At3g20550.1 68416.m02601 forkhead-associated domain-containing
protein / FHA domain-containing protein weak similarity
to SP|Q28147 Nuclear inhibitor of protein phosphatase-1
(NIPP-1) (Protein phosphatase 1, regulatory inhibitor
subunit 8) {Bos taurus}; contains Pfam profile PF00498:
FHA domain
Length = 314
Score = 33.1 bits (72), Expect = 0.57
Identities = 21/110 (19%), Positives = 52/110 (47%), Gaps = 3/110 (2%)
Query: 54 RAASAAKELERSRHAKDALELSKLQESTRQQEQMAKIKEYEAAIEQAKVEQKKVDYEERR 113
R A KE+ RSR +D + + S + + + ++ E + + E+ + ++RR
Sbjct: 16 RRARGEKEIGRSREREDDGREREKRNSRERDRDIGRDRDRE---RKGEGERDREVGDKRR 72
Query: 114 KTLQEETKQHQMRAQYQDQLAKKRYEEQLVQQQKSQEEILRKQEESVAKQ 163
++ +E+T++ + ++ ++ R+E +S R E ++A +
Sbjct: 73 RSGREDTEKRRRTRTDDERYSRGRHERSTSPSDRSHRSSRRSPERAIASR 122
>At3g20150.1 68416.m02554 kinesin motor family protein contains Pfam
domain, PF00225: Kinesin motor domain
Length = 1114
Score = 33.1 bits (72), Expect = 0.57
Identities = 19/83 (22%), Positives = 45/83 (54%), Gaps = 2/83 (2%)
Query: 99 QAKVEQKKVDYEERRKTLQEETKQHQMRAQYQDQLAKKRYEEQLVQQQKSQEEILRKQEE 158
++K +K ++ EER + + E++ + +++ ++ +R + + Q QE++ ++ E
Sbjct: 878 RSKNAEKDIE-EERLRCTEMESEWISLTDEFRVEIETQRTRAEKAEAQLKQEKLSSEELE 936
Query: 159 SVAKQEALRRAT-IEHEMELREK 180
++ L A +EH EL+EK
Sbjct: 937 DALRRAVLGHARFVEHYTELQEK 959
Database: arabidopsis
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.314 0.128 0.347
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,634,215
Number of Sequences: 28952
Number of extensions: 435981
Number of successful extensions: 4077
Number of sequences better than 10.0: 453
Number of HSP's better than 10.0 without gapping: 202
Number of HSP's successfully gapped in prelim test: 251
Number of HSP's that attempted gapping in prelim test: 2635
Number of HSP's gapped (non-prelim): 1159
length of query: 631
length of database: 12,070,560
effective HSP length: 85
effective length of query: 546
effective length of database: 9,609,640
effective search space: 5246863440
effective search space used: 5246863440
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 62 (29.1 bits)
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