GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000541-TA|BGIBMGA000541-PA|IPR007087|Zinc finger,
C2H2-type, IPR006629|LPS-induced tumor necrosis factor alpha factor
         (133 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF387862-2|AAL56548.1|  942|Anopheles gambiae pol polyprotein pr...    22   6.0  
AF387858-1|AAL58708.1|  209|Anopheles gambiae integrase protein.       22   6.0  
AF387857-1|AAL58707.1|  215|Anopheles gambiae integrase protein.       22   6.0  
AF387850-1|AAL58705.1|  209|Anopheles gambiae integrase protein.       22   6.0  

>AF387862-2|AAL56548.1|  942|Anopheles gambiae pol polyprotein
           protein.
          Length = 942

 Score = 22.2 bits (45), Expect = 6.0
 Identities = 8/17 (47%), Positives = 11/17 (64%)

Query: 73  HAEINTSTQTKPGLIAY 89
           HA IN S +T P ++ Y
Sbjct: 304 HAAINRSKKTNPQIVEY 320


>AF387858-1|AAL58708.1|  209|Anopheles gambiae integrase protein.
          Length = 209

 Score = 22.2 bits (45), Expect = 6.0
 Identities = 8/17 (47%), Positives = 11/17 (64%)

Query: 73 HAEINTSTQTKPGLIAY 89
          HA IN S +T P ++ Y
Sbjct: 74 HAAINRSKKTNPQIVEY 90


>AF387857-1|AAL58707.1|  215|Anopheles gambiae integrase protein.
          Length = 215

 Score = 22.2 bits (45), Expect = 6.0
 Identities = 8/17 (47%), Positives = 11/17 (64%)

Query: 73 HAEINTSTQTKPGLIAY 89
          HA IN S +T P ++ Y
Sbjct: 74 HAAINRSKKTNPQIVEY 90


>AF387850-1|AAL58705.1|  209|Anopheles gambiae integrase protein.
          Length = 209

 Score = 22.2 bits (45), Expect = 6.0
 Identities = 8/17 (47%), Positives = 11/17 (64%)

Query: 73 HAEINTSTQTKPGLIAY 89
          HA IN S +T P ++ Y
Sbjct: 74 HAAINRSKKTNPQIVEY 90


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.321    0.135    0.456 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 86,523
Number of Sequences: 2123
Number of extensions: 1258
Number of successful extensions: 6
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 2
Number of HSP's gapped (non-prelim): 4
length of query: 133
length of database: 516,269
effective HSP length: 58
effective length of query: 75
effective length of database: 393,135
effective search space: 29485125
effective search space used: 29485125
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 44 (21.8 bits)