Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000541-TA|BGIBMGA000541-PA|IPR007087|Zinc finger,
C2H2-type, IPR006629|LPS-induced tumor necrosis factor alpha factor
(133 letters)
Database: human
224,733 sequences; 73,234,838 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BX537543-1|CAD97778.1| 161|Homo sapiens hypothetical protein pr... 38 0.014
BC101969-1|AAI01970.1| 161|Homo sapiens LPS-induced TNF-alpha f... 38 0.014
BC101402-1|AAI01403.1| 161|Homo sapiens lipopolysaccharide-indu... 38 0.014
BC101401-1|AAI01402.1| 161|Homo sapiens LPS-induced TNF-alpha f... 38 0.014
BC096066-1|AAH96066.1| 161|Homo sapiens lipopolysaccharide-indu... 38 0.014
BC096065-1|AAH96065.1| 161|Homo sapiens lipopolysaccharide-indu... 38 0.014
BC096063-1|AAH96063.1| 161|Homo sapiens lipopolysaccharide-indu... 38 0.014
BC046154-1|AAH46154.1| 161|Homo sapiens lipopolysaccharide-indu... 38 0.014
BC039840-1|AAH39840.1| 161|Homo sapiens lipopolysaccharide-indu... 38 0.014
BC016491-1|AAH16491.1| 161|Homo sapiens lipopolysaccharide-indu... 38 0.014
BC008309-1|AAH08309.1| 161|Homo sapiens lipopolysaccharide-indu... 38 0.014
BC000053-1|AAH00053.1| 161|Homo sapiens LITAF protein protein. 38 0.014
AB034747-1|BAB32547.1| 161|Homo sapiens small integral membrane... 38 0.014
DQ167023-1|AAZ94626.1| 208|Homo sapiens cell death inducing pro... 33 0.40
BC007604-1|AAH07604.1| 125|Homo sapiens Unknown (protein for IM... 33 0.40
BC002882-1|AAH02882.1| 208|Homo sapiens chromosome 16 open read... 33 0.40
AF195661-1|AAG35583.1| 208|Homo sapiens transmembrane protein I... 33 0.40
CR533446-1|CAG38477.1| 208|Homo sapiens C16orf5 protein. 32 0.71
>BX537543-1|CAD97778.1| 161|Homo sapiens hypothetical protein
protein.
Length = 161
Score = 37.5 bits (83), Expect = 0.014
Identities = 18/67 (26%), Positives = 27/67 (40%)
Query: 67 MICPSCHAEINTSTQTKPGLIAYITXXXXXXXXXXXXXXXXXXXXDSCMDVHHKCPHCDT 126
M CPSC+ I + G + +++ D+ DV H CP+C
Sbjct: 94 MCCPSCNKMIVSQLSYNAGALTWLSCGSLCLLGCIAGCCFIPFCVDALQDVDHYCPNCRA 153
Query: 127 YLGRYRR 133
LG Y+R
Sbjct: 154 LLGTYKR 160
>BC101969-1|AAI01970.1| 161|Homo sapiens LPS-induced TNF-alpha
factor protein.
Length = 161
Score = 37.5 bits (83), Expect = 0.014
Identities = 18/67 (26%), Positives = 27/67 (40%)
Query: 67 MICPSCHAEINTSTQTKPGLIAYITXXXXXXXXXXXXXXXXXXXXDSCMDVHHKCPHCDT 126
M CPSC+ I + G + +++ D+ DV H CP+C
Sbjct: 94 MCCPSCNKMIVSQLSYNAGALTWLSCGSLCLLGCIAGCCFIPFCVDALQDVDHYCPNCRA 153
Query: 127 YLGRYRR 133
LG Y+R
Sbjct: 154 LLGTYKR 160
>BC101402-1|AAI01403.1| 161|Homo sapiens lipopolysaccharide-induced
TNF factor protein.
Length = 161
Score = 37.5 bits (83), Expect = 0.014
Identities = 18/67 (26%), Positives = 27/67 (40%)
Query: 67 MICPSCHAEINTSTQTKPGLIAYITXXXXXXXXXXXXXXXXXXXXDSCMDVHHKCPHCDT 126
M CPSC+ I + G + +++ D+ DV H CP+C
Sbjct: 94 MCCPSCNKMIVSQLSYNAGALTWLSCGSLCLLGCIAGCCFIPFCVDALQDVDHYCPNCRA 153
Query: 127 YLGRYRR 133
LG Y+R
Sbjct: 154 LLGTYKR 160
>BC101401-1|AAI01402.1| 161|Homo sapiens LPS-induced TNF-alpha
factor protein.
Length = 161
Score = 37.5 bits (83), Expect = 0.014
Identities = 18/67 (26%), Positives = 27/67 (40%)
Query: 67 MICPSCHAEINTSTQTKPGLIAYITXXXXXXXXXXXXXXXXXXXXDSCMDVHHKCPHCDT 126
M CPSC+ I + G + +++ D+ DV H CP+C
Sbjct: 94 MCCPSCNKMIVSQLSYNAGALTWLSCGSLCLLGCIAGCCFIPFCVDALQDVDHYCPNCRA 153
Query: 127 YLGRYRR 133
LG Y+R
Sbjct: 154 LLGTYKR 160
>BC096066-1|AAH96066.1| 161|Homo sapiens lipopolysaccharide-induced
TNF factor protein.
Length = 161
Score = 37.5 bits (83), Expect = 0.014
Identities = 18/67 (26%), Positives = 27/67 (40%)
Query: 67 MICPSCHAEINTSTQTKPGLIAYITXXXXXXXXXXXXXXXXXXXXDSCMDVHHKCPHCDT 126
M CPSC+ I + G + +++ D+ DV H CP+C
Sbjct: 94 MCCPSCNKMIVSQLSYNAGALTWLSCGSLCLLGCIAGCCFIPFCVDALQDVDHYCPNCRA 153
Query: 127 YLGRYRR 133
LG Y+R
Sbjct: 154 LLGTYKR 160
>BC096065-1|AAH96065.1| 161|Homo sapiens lipopolysaccharide-induced
TNF factor protein.
Length = 161
Score = 37.5 bits (83), Expect = 0.014
Identities = 18/67 (26%), Positives = 27/67 (40%)
Query: 67 MICPSCHAEINTSTQTKPGLIAYITXXXXXXXXXXXXXXXXXXXXDSCMDVHHKCPHCDT 126
M CPSC+ I + G + +++ D+ DV H CP+C
Sbjct: 94 MCCPSCNKMIVSQLSYNAGALTWLSCGSLCLLGCIAGCCFIPFCVDALQDVDHYCPNCRA 153
Query: 127 YLGRYRR 133
LG Y+R
Sbjct: 154 LLGTYKR 160
>BC096063-1|AAH96063.1| 161|Homo sapiens lipopolysaccharide-induced
TNF factor protein.
Length = 161
Score = 37.5 bits (83), Expect = 0.014
Identities = 18/67 (26%), Positives = 27/67 (40%)
Query: 67 MICPSCHAEINTSTQTKPGLIAYITXXXXXXXXXXXXXXXXXXXXDSCMDVHHKCPHCDT 126
M CPSC+ I + G + +++ D+ DV H CP+C
Sbjct: 94 MCCPSCNKMIVSQLSYNAGALTWLSCGSLCLLGCIAGCCFIPFCVDALQDVDHYCPNCRA 153
Query: 127 YLGRYRR 133
LG Y+R
Sbjct: 154 LLGTYKR 160
>BC046154-1|AAH46154.1| 161|Homo sapiens lipopolysaccharide-induced
TNF factor protein.
Length = 161
Score = 37.5 bits (83), Expect = 0.014
Identities = 18/67 (26%), Positives = 27/67 (40%)
Query: 67 MICPSCHAEINTSTQTKPGLIAYITXXXXXXXXXXXXXXXXXXXXDSCMDVHHKCPHCDT 126
M CPSC+ I + G + +++ D+ DV H CP+C
Sbjct: 94 MCCPSCNKMIVSQLSYNAGALTWLSCGSLCLLGCIAGCCFIPFCVDALQDVDHYCPNCRA 153
Query: 127 YLGRYRR 133
LG Y+R
Sbjct: 154 LLGTYKR 160
>BC039840-1|AAH39840.1| 161|Homo sapiens lipopolysaccharide-induced
TNF factor protein.
Length = 161
Score = 37.5 bits (83), Expect = 0.014
Identities = 18/67 (26%), Positives = 27/67 (40%)
Query: 67 MICPSCHAEINTSTQTKPGLIAYITXXXXXXXXXXXXXXXXXXXXDSCMDVHHKCPHCDT 126
M CPSC+ I + G + +++ D+ DV H CP+C
Sbjct: 94 MCCPSCNKMIVSQLSYNAGALTWLSCGSLCLLGCIAGCCFIPFCVDALQDVDHYCPNCRA 153
Query: 127 YLGRYRR 133
LG Y+R
Sbjct: 154 LLGTYKR 160
>BC016491-1|AAH16491.1| 161|Homo sapiens lipopolysaccharide-induced
TNF factor protein.
Length = 161
Score = 37.5 bits (83), Expect = 0.014
Identities = 18/67 (26%), Positives = 27/67 (40%)
Query: 67 MICPSCHAEINTSTQTKPGLIAYITXXXXXXXXXXXXXXXXXXXXDSCMDVHHKCPHCDT 126
M CPSC+ I + G + +++ D+ DV H CP+C
Sbjct: 94 MCCPSCNKMIVSQLSYNAGALTWLSCGSLCLLGCIAGCCFIPFCVDALQDVDHYCPNCRA 153
Query: 127 YLGRYRR 133
LG Y+R
Sbjct: 154 LLGTYKR 160
>BC008309-1|AAH08309.1| 161|Homo sapiens lipopolysaccharide-induced
TNF factor protein.
Length = 161
Score = 37.5 bits (83), Expect = 0.014
Identities = 18/67 (26%), Positives = 27/67 (40%)
Query: 67 MICPSCHAEINTSTQTKPGLIAYITXXXXXXXXXXXXXXXXXXXXDSCMDVHHKCPHCDT 126
M CPSC+ I + G + +++ D+ DV H CP+C
Sbjct: 94 MCCPSCNKMIVSQLSYNAGALTWLSCGSLCLLGCIAGCCFIPFCVDALQDVDHYCPNCRA 153
Query: 127 YLGRYRR 133
LG Y+R
Sbjct: 154 LLGTYKR 160
>BC000053-1|AAH00053.1| 161|Homo sapiens LITAF protein protein.
Length = 161
Score = 37.5 bits (83), Expect = 0.014
Identities = 18/67 (26%), Positives = 27/67 (40%)
Query: 67 MICPSCHAEINTSTQTKPGLIAYITXXXXXXXXXXXXXXXXXXXXDSCMDVHHKCPHCDT 126
M CPSC+ I + G + +++ D+ DV H CP+C
Sbjct: 94 MCCPSCNKMIVSQLSYNAGALTWLSCGSLCLLGCIAGCCFIPFCVDALQDVDHYCPNCRA 153
Query: 127 YLGRYRR 133
LG Y+R
Sbjct: 154 LLGTYKR 160
>AB034747-1|BAB32547.1| 161|Homo sapiens small integral membrane
protein of lysosome/late endosome protein.
Length = 161
Score = 37.5 bits (83), Expect = 0.014
Identities = 18/67 (26%), Positives = 27/67 (40%)
Query: 67 MICPSCHAEINTSTQTKPGLIAYITXXXXXXXXXXXXXXXXXXXXDSCMDVHHKCPHCDT 126
M CPSC+ I + G + +++ D+ DV H CP+C
Sbjct: 94 MCCPSCNKMIVSQLSYNAGALTWLSCGSLCLLGCIAGCCFIPFCVDALQDVDHYCPNCRA 153
Query: 127 YLGRYRR 133
LG Y+R
Sbjct: 154 LLGTYKR 160
>DQ167023-1|AAZ94626.1| 208|Homo sapiens cell death inducing
protein protein.
Length = 208
Score = 32.7 bits (71), Expect = 0.40
Identities = 16/66 (24%), Positives = 24/66 (36%)
Query: 68 ICPSCHAEINTSTQTKPGLIAYITXXXXXXXXXXXXXXXXXXXXDSCMDVHHKCPHCDTY 127
+CP C I T + GL+ ++ + DV H CP C Y
Sbjct: 141 VCPHCQQAITTKISYEIGLMNFVLGFFCCFMGCDLGCCLIPCLINDFKDVTHTCPSCKAY 200
Query: 128 LGRYRR 133
+ Y+R
Sbjct: 201 IYTYKR 206
>BC007604-1|AAH07604.1| 125|Homo sapiens Unknown (protein for
IMAGE:3350242) protein.
Length = 125
Score = 32.7 bits (71), Expect = 0.40
Identities = 16/66 (24%), Positives = 24/66 (36%)
Query: 68 ICPSCHAEINTSTQTKPGLIAYITXXXXXXXXXXXXXXXXXXXXDSCMDVHHKCPHCDTY 127
+CP C I T + GL+ ++ + DV H CP C Y
Sbjct: 58 VCPHCQQAITTKISYEIGLMNFVLGFFCCFMGCDLGCCLIPCLINDFKDVTHTCPSCKAY 117
Query: 128 LGRYRR 133
+ Y+R
Sbjct: 118 IYTYKR 123
>BC002882-1|AAH02882.1| 208|Homo sapiens chromosome 16 open reading
frame 5 protein.
Length = 208
Score = 32.7 bits (71), Expect = 0.40
Identities = 16/66 (24%), Positives = 24/66 (36%)
Query: 68 ICPSCHAEINTSTQTKPGLIAYITXXXXXXXXXXXXXXXXXXXXDSCMDVHHKCPHCDTY 127
+CP C I T + GL+ ++ + DV H CP C Y
Sbjct: 141 VCPHCQQAITTKISYEIGLMNFVLGFFCCFMGCDLGCCLIPCLINDFKDVTHTCPSCKAY 200
Query: 128 LGRYRR 133
+ Y+R
Sbjct: 201 IYTYKR 206
>AF195661-1|AAG35583.1| 208|Homo sapiens transmembrane protein I1
protein.
Length = 208
Score = 32.7 bits (71), Expect = 0.40
Identities = 16/66 (24%), Positives = 24/66 (36%)
Query: 68 ICPSCHAEINTSTQTKPGLIAYITXXXXXXXXXXXXXXXXXXXXDSCMDVHHKCPHCDTY 127
+CP C I T + GL+ ++ + DV H CP C Y
Sbjct: 141 VCPHCQQAITTKISYEIGLMNFVLGFFCCFMGCDLGCCLIPCLINDFKDVTHTCPSCKAY 200
Query: 128 LGRYRR 133
+ Y+R
Sbjct: 201 IYTYKR 206
>CR533446-1|CAG38477.1| 208|Homo sapiens C16orf5 protein.
Length = 208
Score = 31.9 bits (69), Expect = 0.71
Identities = 16/66 (24%), Positives = 24/66 (36%)
Query: 68 ICPSCHAEINTSTQTKPGLIAYITXXXXXXXXXXXXXXXXXXXXDSCMDVHHKCPHCDTY 127
+CP C I T + GL+ ++ + DV H CP C Y
Sbjct: 141 VCPHCQQAIATKISYEIGLMNFVLGFFCCFMGCDLGCCLIPCLINDFKDVTHTCPSCKAY 200
Query: 128 LGRYRR 133
+ Y+R
Sbjct: 201 IYTYKR 206
Database: human
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 73,234,838
Number of sequences in database: 224,733
Lambda K H
0.321 0.135 0.456
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,841,590
Number of Sequences: 224733
Number of extensions: 210543
Number of successful extensions: 382
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 351
Number of HSP's gapped (non-prelim): 18
length of query: 133
length of database: 73,234,838
effective HSP length: 82
effective length of query: 51
effective length of database: 54,806,732
effective search space: 2795143332
effective search space used: 2795143332
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 60 (28.3 bits)
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