Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000541-TA|BGIBMGA000541-PA|IPR007087|Zinc finger,
C2H2-type, IPR006629|LPS-induced tumor necrosis factor alpha factor
(133 letters)
Database: fruitfly
52,641 sequences; 24,830,863 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AE014296-579|AAN11537.1| 130|Drosophila melanogaster CG32280-PC... 85 3e-17
AE014296-578|AAN11536.1| 130|Drosophila melanogaster CG32280-PB... 85 3e-17
AE014296-577|AAN11535.1| 130|Drosophila melanogaster CG32280-PA... 85 3e-17
AY060947-1|AAL28495.1| 67|Drosophila melanogaster GM08588p pro... 82 3e-16
AE013599-3615|AAF47016.1| 114|Drosophila melanogaster CG13559-P... 45 3e-05
AE013599-3436|AAF46879.2| 129|Drosophila melanogaster CG13510-P... 40 0.001
AE013599-3441|AAF46883.2| 144|Drosophila melanogaster CG30269-P... 34 0.073
AE013599-3437|AAF46880.1| 122|Drosophila melanogaster CG13511-P... 33 0.096
AY113600-1|AAM29605.1| 121|Drosophila melanogaster RH52355p pro... 29 1.6
AY071678-1|AAL49300.1| 121|Drosophila melanogaster RH06571p pro... 29 1.6
AE013599-3439|AAF46882.1| 121|Drosophila melanogaster CG4250-PA... 29 1.6
AE013599-3440|AAM71112.1| 128|Drosophila melanogaster CG30273-P... 28 3.6
AY070933-1|AAL48555.1| 153|Drosophila melanogaster RE03238p pro... 27 6.3
AE013599-3428|AAF46874.2| 153|Drosophila melanogaster CG30195-P... 27 6.3
>AE014296-579|AAN11537.1| 130|Drosophila melanogaster CG32280-PC,
isoform C protein.
Length = 130
Score = 85.0 bits (201), Expect = 3e-17
Identities = 43/109 (39%), Positives = 51/109 (46%), Gaps = 2/109 (1%)
Query: 27 SYSQAVGGVXXXXXXX--XXXXXXXXXXIXXXXXXXXXXXXXMICPSCHAEINTSTQTKP 84
SY +AVGGV I MICPSCHAEI T+T+T+P
Sbjct: 22 SYQEAVGGVKPVGPYTPVVAPATTANTTIVTTVVPISRTSTHMICPSCHAEIETTTRTEP 81
Query: 85 GLIAYITXXXXXXXXXXXXXXXXXXXXDSCMDVHHKCPHCDTYLGRYRR 133
G+IAY++ D CMDVHH CP+C YLGRYRR
Sbjct: 82 GMIAYLSGFLIALFGCWLGCCLIPCCIDDCMDVHHSCPNCRAYLGRYRR 130
>AE014296-578|AAN11536.1| 130|Drosophila melanogaster CG32280-PB,
isoform B protein.
Length = 130
Score = 85.0 bits (201), Expect = 3e-17
Identities = 43/109 (39%), Positives = 51/109 (46%), Gaps = 2/109 (1%)
Query: 27 SYSQAVGGVXXXXXXX--XXXXXXXXXXIXXXXXXXXXXXXXMICPSCHAEINTSTQTKP 84
SY +AVGGV I MICPSCHAEI T+T+T+P
Sbjct: 22 SYQEAVGGVKPVGPYTPVVAPATTANTTIVTTVVPISRTSTHMICPSCHAEIETTTRTEP 81
Query: 85 GLIAYITXXXXXXXXXXXXXXXXXXXXDSCMDVHHKCPHCDTYLGRYRR 133
G+IAY++ D CMDVHH CP+C YLGRYRR
Sbjct: 82 GMIAYLSGFLIALFGCWLGCCLIPCCIDDCMDVHHSCPNCRAYLGRYRR 130
>AE014296-577|AAN11535.1| 130|Drosophila melanogaster CG32280-PA,
isoform A protein.
Length = 130
Score = 85.0 bits (201), Expect = 3e-17
Identities = 43/109 (39%), Positives = 51/109 (46%), Gaps = 2/109 (1%)
Query: 27 SYSQAVGGVXXXXXXX--XXXXXXXXXXIXXXXXXXXXXXXXMICPSCHAEINTSTQTKP 84
SY +AVGGV I MICPSCHAEI T+T+T+P
Sbjct: 22 SYQEAVGGVKPVGPYTPVVAPATTANTTIVTTVVPISRTSTHMICPSCHAEIETTTRTEP 81
Query: 85 GLIAYITXXXXXXXXXXXXXXXXXXXXDSCMDVHHKCPHCDTYLGRYRR 133
G+IAY++ D CMDVHH CP+C YLGRYRR
Sbjct: 82 GMIAYLSGFLIALFGCWLGCCLIPCCIDDCMDVHHSCPNCRAYLGRYRR 130
>AY060947-1|AAL28495.1| 67|Drosophila melanogaster GM08588p
protein.
Length = 67
Score = 81.8 bits (193), Expect = 3e-16
Identities = 35/67 (52%), Positives = 42/67 (62%)
Query: 67 MICPSCHAEINTSTQTKPGLIAYITXXXXXXXXXXXXXXXXXXXXDSCMDVHHKCPHCDT 126
MICPSCHAEI T+T+T+PG+IAY++ D CMDVHH CP+C
Sbjct: 1 MICPSCHAEIETTTRTEPGMIAYLSGFLIALFGCWLGCCLIPCCIDDCMDVHHSCPNCRA 60
Query: 127 YLGRYRR 133
YLGRYRR
Sbjct: 61 YLGRYRR 67
>AE013599-3615|AAF47016.1| 114|Drosophila melanogaster CG13559-PA
protein.
Length = 114
Score = 45.2 bits (102), Expect = 3e-05
Identities = 21/63 (33%), Positives = 27/63 (42%)
Query: 67 MICPSCHAEINTSTQTKPGLIAYITXXXXXXXXXXXXXXXXXXXXDSCMDVHHKCPHCDT 126
MICP CH EI T+T+ + IAY+ D ++HH CP C
Sbjct: 41 MICPMCHDEIETTTKIRRRWIAYVASGIVLFTTCGIGCWLIPCILDCFNEIHHSCPVCKA 100
Query: 127 YLG 129
LG
Sbjct: 101 TLG 103
>AE013599-3436|AAF46879.2| 129|Drosophila melanogaster CG13510-PA
protein.
Length = 129
Score = 39.9 bits (89), Expect = 0.001
Identities = 19/63 (30%), Positives = 28/63 (44%), Gaps = 1/63 (1%)
Query: 69 CPSCHAEINTSTQTKPGLIAYITXXXXXXXXXXXXXXXXXXXXDSCMDVHHKCPHCDTYL 128
CPSCHAE+ T+ ++ P + DSC + +H CP+C Y+
Sbjct: 66 CPSCHAEVLTTVKSTPSGRTHCWALILCLFICWPCVCLPYCM-DSCQNANHYCPNCSAYI 124
Query: 129 GRY 131
G Y
Sbjct: 125 GTY 127
>AE013599-3441|AAF46883.2| 144|Drosophila melanogaster CG30269-PA
protein.
Length = 144
Score = 33.9 bits (74), Expect = 0.073
Identities = 19/65 (29%), Positives = 23/65 (35%), Gaps = 1/65 (1%)
Query: 69 CPSCHAEINTSTQTKPGLIAYITXXXXXXXXXXXXXXXXXXXXDSCMDVHHKCPHCDTYL 128
CP CH T KP ++ SCM+ +H C CD YL
Sbjct: 80 CPYCHNYARTRVSFKPNSRTHLIALILCLFQLYCCVCLPYCIS-SCMNTNHYCGMCDRYL 138
Query: 129 GRYRR 133
G Y R
Sbjct: 139 GTYDR 143
>AE013599-3437|AAF46880.1| 122|Drosophila melanogaster CG13511-PA
protein.
Length = 122
Score = 33.5 bits (73), Expect = 0.096
Identities = 17/63 (26%), Positives = 24/63 (38%), Gaps = 1/63 (1%)
Query: 69 CPSCHAEINTSTQTKPGLIAYITXXXXXXXXXXXXXXXXXXXXDSCMDVHHKCPHCDTYL 128
CPSC E+ TS T P ++ + C V H CP+C ++
Sbjct: 59 CPSCRGEVTTSLATSPTRKTHMCALTLYICCCWPFICLPYFI-NYCKSVQHYCPNCGCHI 117
Query: 129 GRY 131
G Y
Sbjct: 118 GSY 120
>AY113600-1|AAM29605.1| 121|Drosophila melanogaster RH52355p
protein.
Length = 121
Score = 29.5 bits (63), Expect = 1.6
Identities = 15/64 (23%), Positives = 21/64 (32%), Gaps = 1/64 (1%)
Query: 69 CPSCHAEINTSTQTKPGLIAYITXXXXXXXXXXXXXXXXXXXXDSCMDVHHKCPHCDTYL 128
CPSC T + +P ++ DSC H C C Y+
Sbjct: 58 CPSCGVRRETKVEFEPSTKTHLLALLICMLGGICCCCIPYCT-DSCQSAKHTCTSCGAYV 116
Query: 129 GRYR 132
G Y+
Sbjct: 117 GTYK 120
>AY071678-1|AAL49300.1| 121|Drosophila melanogaster RH06571p
protein.
Length = 121
Score = 29.5 bits (63), Expect = 1.6
Identities = 15/64 (23%), Positives = 21/64 (32%), Gaps = 1/64 (1%)
Query: 69 CPSCHAEINTSTQTKPGLIAYITXXXXXXXXXXXXXXXXXXXXDSCMDVHHKCPHCDTYL 128
CPSC T + +P ++ DSC H C C Y+
Sbjct: 58 CPSCGVRRETKVEFEPSTKTHLLALLICMLGGICCCCIPYCT-DSCQSAKHTCTSCGAYV 116
Query: 129 GRYR 132
G Y+
Sbjct: 117 GTYK 120
>AE013599-3439|AAF46882.1| 121|Drosophila melanogaster CG4250-PA
protein.
Length = 121
Score = 29.5 bits (63), Expect = 1.6
Identities = 15/64 (23%), Positives = 21/64 (32%), Gaps = 1/64 (1%)
Query: 69 CPSCHAEINTSTQTKPGLIAYITXXXXXXXXXXXXXXXXXXXXDSCMDVHHKCPHCDTYL 128
CPSC T + +P ++ DSC H C C Y+
Sbjct: 58 CPSCGVRRETKVEFEPSTKTHLLALLICMLGGICCCCIPYCT-DSCQSAKHTCTSCGAYV 116
Query: 129 GRYR 132
G Y+
Sbjct: 117 GTYK 120
>AE013599-3440|AAM71112.1| 128|Drosophila melanogaster CG30273-PA
protein.
Length = 128
Score = 28.3 bits (60), Expect = 3.6
Identities = 14/63 (22%), Positives = 24/63 (38%), Gaps = 1/63 (1%)
Query: 69 CPSCHAEINTSTQTKPGLIAYITXXXXXXXXXXXXXXXXXXXXDSCMDVHHKCPHCDTYL 128
CP CH + T + P + + SCM+ +H C +C+ ++
Sbjct: 64 CPHCHVQKLTRVEYSPSVKTHCMAAILCIVGLWCCACLPYCAT-SCMNANHFCGNCNKFV 122
Query: 129 GRY 131
G Y
Sbjct: 123 GVY 125
>AY070933-1|AAL48555.1| 153|Drosophila melanogaster RE03238p
protein.
Length = 153
Score = 27.5 bits (58), Expect = 6.3
Identities = 7/16 (43%), Positives = 12/16 (75%)
Query: 116 DVHHKCPHCDTYLGRY 131
D++H C HC ++GR+
Sbjct: 68 DINHYCSHCGCFIGRF 83
>AE013599-3428|AAF46874.2| 153|Drosophila melanogaster CG30195-PA
protein.
Length = 153
Score = 27.5 bits (58), Expect = 6.3
Identities = 7/16 (43%), Positives = 12/16 (75%)
Query: 116 DVHHKCPHCDTYLGRY 131
D++H C HC ++GR+
Sbjct: 68 DINHYCSHCGCFIGRF 83
Database: fruitfly
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 24,830,863
Number of sequences in database: 52,641
Lambda K H
0.321 0.135 0.456
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,262,322
Number of Sequences: 52641
Number of extensions: 69117
Number of successful extensions: 202
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 182
Number of HSP's gapped (non-prelim): 16
length of query: 133
length of database: 24,830,863
effective HSP length: 77
effective length of query: 56
effective length of database: 20,777,506
effective search space: 1163540336
effective search space used: 1163540336
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 57 (27.1 bits)
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