Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000539-TA|BGIBMGA000539-PA|undefined
(634 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC14C8.08c |||dubious|Schizosaccharomyces pombe|chr 2|||Manual 32 0.21
SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr 1... 31 0.64
SPBC4.03c |||COPII-coated vesicle component Sfb3 |Schizosaccharo... 30 1.1
SPAPB1A10.08 |||sequence orphan|Schizosaccharomyces pombe|chr 1|... 29 2.0
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 29 2.0
SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31 |Schizo... 29 2.0
SPBC947.10 |||ubiquitin-protein ligase E3 |Schizosaccharomyces p... 29 2.6
SPAC12G12.09 |||sequence orphan|Schizosaccharomyces pombe|chr 1|... 29 2.6
SPCC338.08 |ctp1|mug38|sequence orphan|Schizosaccharomyces pombe... 29 2.6
SPAC1D4.14 |tho2|SPAC22F3.14c|THO complex subunit Tho2 |Schizosa... 29 2.6
SPAC1F3.03 |||Lgl family protein|Schizosaccharomyces pombe|chr 1... 29 2.6
SPAC12G12.03 |cip2||RNA-binding protein Cip2|Schizosaccharomyces... 29 2.6
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 28 3.4
SPAC1B3.15c |||membrane transporter|Schizosaccharomyces pombe|ch... 28 3.4
SPCC736.14 |dis1||microtubule-associated protein Dis1 |Schizosac... 28 3.4
SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr 2|||... 28 3.4
SPBC13G1.12 |did2||vacuolar sorting protein Did2|Schizosaccharom... 28 4.5
SPAC1142.03c |swi2|SPAC17G6.20c|Swi5 complex subunit Swi2|Schizo... 28 4.5
SPCC23B6.04c |||sec14 cytosolic factor family|Schizosaccharomyce... 28 4.5
SPAC1002.03c |gls2||glucosidase II Gls2|Schizosaccharomyces pomb... 28 4.5
SPAC23E2.02 |lsd2|swm2, saf140|histone demethylase SWIRM2 |Schiz... 28 4.5
SPCC1919.01 |ppk34|SPCC830.12|serine/threonine protein kinase Pp... 28 4.5
SPBC21D10.06c |map4||cell agglutination protein Map4|Schizosacch... 27 6.0
SPBC16G5.07c |||prohibitin |Schizosaccharomyces pombe|chr 2|||Ma... 27 6.0
SPAC31A2.12 |||arrestin/PY protein 1|Schizosaccharomyces pombe|c... 27 6.0
SPBC530.05 |||transcription factor |Schizosaccharomyces pombe|ch... 27 7.9
SPAC3C7.03c |rhp55||RecA family ATPase Rhp55|Schizosaccharomyces... 27 7.9
SPAC4F10.16c |||P-type ATPase |Schizosaccharomyces pombe|chr 1||... 27 7.9
SPBC902.04 |||RNA-binding protein|Schizosaccharomyces pombe|chr ... 27 7.9
SPBP19A11.02c |||sequence orphan|Schizosaccharomyces pombe|chr 2... 27 7.9
>SPBC14C8.08c |||dubious|Schizosaccharomyces pombe|chr 2|||Manual
Length = 182
Score = 32.3 bits (70), Expect = 0.21
Identities = 26/118 (22%), Positives = 54/118 (45%), Gaps = 8/118 (6%)
Query: 5 SSVNETNLVNYSADLSTLNQLDTKESLLSFPFDHIYACHSESADRRQTLTLDKEVEISTH 64
SS+ + + +A T+N L L+ P H H +S + LD ++
Sbjct: 54 SSLLDQRIRQITAKDKTVNLL---RKTLNRPLLHEVDYHGKSLE-----ILDMLLQSRNS 105
Query: 65 CVVSEEKDLVVGSNTELRTKLNRMDKKVTINQRPNLNLPPPSANVPTPAVTSTVVKSE 122
+ S +L + + + ++N++++K+T + PN+N+P A+ T ++SE
Sbjct: 106 MISSLRSELQEKNQKDKKKEVNKLEEKMTNAKEPNVNVPSMKASSAISVETPETIESE 163
>SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 857
Score = 30.7 bits (66), Expect = 0.64
Identities = 16/37 (43%), Positives = 23/37 (62%), Gaps = 7/37 (18%)
Query: 495 PSVMTPTIPFEEPLAPITPVLPVVN------AAPDVP 525
PSV+TP++P + P AP+ P P V+ AP+VP
Sbjct: 507 PSVITPSVP-QPPAAPVVPEAPSVHQPPAAPVAPEVP 542
Score = 28.7 bits (61), Expect = 2.6
Identities = 17/46 (36%), Positives = 19/46 (41%), Gaps = 2/46 (4%)
Query: 481 KPPADKTKKRVGRTPS-VMTPTIPFEEPLAPITPVLPVVNAAPDVP 525
+PPA V P P +P E P P P PVV P VP
Sbjct: 636 QPPAAPVVPEVPSVPQRPAVPVVP-EAPSVPQPPAAPVVPEVPSVP 680
Score = 28.3 bits (60), Expect = 3.4
Identities = 16/46 (34%), Positives = 19/46 (41%), Gaps = 2/46 (4%)
Query: 481 KPPADKTKKRVGRTPSV-MTPTIPFEEPLAPITPVLPVVNAAPDVP 525
+PP V P + P +P E P P PV PV P VP
Sbjct: 576 QPPVAPVAPEVPSVPQPPVAPVVP-EAPSVPQPPVAPVAPEVPSVP 620
Score = 28.3 bits (60), Expect = 3.4
Identities = 11/27 (40%), Positives = 18/27 (66%), Gaps = 1/27 (3%)
Query: 500 PTIPFEEPLAPITPVLPVVNAAPDVPI 526
P++P + P+AP+ P +P V P VP+
Sbjct: 602 PSVP-QPPVAPVAPEVPSVPQRPAVPV 627
Score = 27.5 bits (58), Expect = 6.0
Identities = 17/46 (36%), Positives = 20/46 (43%), Gaps = 2/46 (4%)
Query: 481 KPPADKTKKRVGRTPS-VMTPTIPFEEPLAPITPVLPVVNAAPDVP 525
+PPA V P P +P E P P P +PVV A VP
Sbjct: 531 QPPAAPVAPEVPSAPQRPAAPVVP-EAPSVPQRPAVPVVPEALSVP 575
Score = 27.5 bits (58), Expect = 6.0
Identities = 17/38 (44%), Positives = 19/38 (50%), Gaps = 3/38 (7%)
Query: 491 VGRTPSVMTPTI-PF--EEPLAPITPVLPVVNAAPDVP 525
V PSV P + P E P P P +PVV AP VP
Sbjct: 598 VPEAPSVPQPPVAPVAPEVPSVPQRPAVPVVPEAPSVP 635
Score = 27.5 bits (58), Expect = 6.0
Identities = 16/46 (34%), Positives = 18/46 (39%), Gaps = 2/46 (4%)
Query: 481 KPPADKTKKRVGRTPS-VMTPTIPFEEPLAPITPVLPVVNAAPDVP 525
+PP V P P +P E P P P PVV P VP
Sbjct: 606 QPPVAPVAPEVPSVPQRPAVPVVP-EAPSVPQPPAAPVVPEVPSVP 650
Score = 27.5 bits (58), Expect = 6.0
Identities = 11/27 (40%), Positives = 17/27 (62%), Gaps = 1/27 (3%)
Query: 500 PTIPFEEPLAPITPVLPVVNAAPDVPI 526
P++P + P AP+ P +P V P VP+
Sbjct: 632 PSVP-QPPAAPVVPEVPSVPQRPAVPV 657
Score = 27.5 bits (58), Expect = 6.0
Identities = 11/27 (40%), Positives = 17/27 (62%), Gaps = 1/27 (3%)
Query: 500 PTIPFEEPLAPITPVLPVVNAAPDVPI 526
P++P + P AP+ P +P V P VP+
Sbjct: 662 PSVP-QPPAAPVVPEVPSVPQPPAVPV 687
>SPBC4.03c |||COPII-coated vesicle component Sfb3
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 891
Score = 29.9 bits (64), Expect = 1.1
Identities = 21/71 (29%), Positives = 30/71 (42%), Gaps = 3/71 (4%)
Query: 104 PPSANVPTPAVTSTVVKSEPNQVMFNSLTELLLPDNRTNPYYFNSDLNKSKTLTQEPFNL 163
PPS N PTP+ S + +S N N L LP + Y + L K++
Sbjct: 88 PPSMNYPTPSTPSVLPESFSNDT--NLLDPAALP-SAPEVRYEDQQLFKNQIFNTMEKGS 144
Query: 164 PKVTETDVTSY 174
P ++ TD Y
Sbjct: 145 PPMSTTDFVGY 155
>SPAPB1A10.08 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 412
Score = 29.1 bits (62), Expect = 2.0
Identities = 28/111 (25%), Positives = 44/111 (39%), Gaps = 11/111 (9%)
Query: 371 SNKPDNKVNTDRF-SSTNTFHDTKIKKDETKTVIVEEPDLDIVKTEPEID--WR------ 421
SNK K DRF SS+ H+ + + + ++ + D W
Sbjct: 84 SNKKTLKSQLDRFLSSSKKLHNDDVNRGDYCFLLSTPVECSASTNSHSYDCLWNFSCNSF 143
Query: 422 -TYASTKAGNETSLCDFSYGENPNNIHIPSIDSMEFQDLFAPDASLNLDNL 471
Y+S A +S+ +SY PN PS S + + D LN++NL
Sbjct: 144 PEYSSYSASETSSVASYSYYSGPNPA-TPSSSSCNLVNANSLDIYLNINNL 193
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 29.1 bits (62), Expect = 2.0
Identities = 38/143 (26%), Positives = 61/143 (42%), Gaps = 26/143 (18%)
Query: 410 DIVKTEPEI--DWRTYASTKAGNETSLCDFSYGENPNNIH-----IPSI--DSMEFQDLF 460
D+++ P+I DW + + G + ++C+ Y N NN H IPS+ D++ L
Sbjct: 786 DVIQERPKISYDWFDFF-LRCGVDFTVCN-RYTHNFNNEHLDEACIPSLNPDTLRTLGLK 843
Query: 461 APDASLNLDNLTAADFGITDKPPA---DKTKKRVGRTPS--------VMTPT---IPFEE 506
D ++++ + G++ KP + +TK V + S V P P E
Sbjct: 844 EGDIIRVMNHVNELN-GVSTKPASAITPETKSTVNQIMSGGEALAAPVAVPAPIPAPVAE 902
Query: 507 PLAPITPVLPVVNAAPDVPIEMP 529
P P P VV AP P P
Sbjct: 903 PAPPAAPAKEVVEKAPSPPATRP 925
>SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1224
Score = 29.1 bits (62), Expect = 2.0
Identities = 22/102 (21%), Positives = 42/102 (41%), Gaps = 6/102 (5%)
Query: 96 QRPNLNLPPPSANVPTPAVTSTVVKSEPNQVMFNSLTELLLPDNRTNPYYFNSDLNKSKT 155
Q+P+ P +P ++ + S PN N T + + + NP + S+
Sbjct: 949 QQPSHPNPYTPVAPQSPVAAASRISSSPNMPPSNPYTPIAVASSTVNPAHTYKPHGGSQI 1008
Query: 156 L--TQEPFN----LPKVTETDVTSYLPSDLTVPPMSILDTNI 191
+ ++P N LP ++Y P ++VP S L ++
Sbjct: 1009 VPPPKQPANRVVPLPPTASQRASAYEPPTVSVPSPSALSPSV 1050
>SPBC947.10 |||ubiquitin-protein ligase E3 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 676
Score = 28.7 bits (61), Expect = 2.6
Identities = 17/59 (28%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
Query: 368 PETSNKPDNKVNTDRFSSTNTFHDTKIKKDETKTVIVEEP-DLDIVKTEPEIDWRTYAS 425
P T+N +N N S+ N+ + D T+T V P + D T+ E D R +++
Sbjct: 405 PVTNNSSNNNTNQSNASNENSPNAPSAANDNTETTTVNPPQEDDQPMTQHERDQRDWSA 463
>SPAC12G12.09 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 977
Score = 28.7 bits (61), Expect = 2.6
Identities = 18/62 (29%), Positives = 34/62 (54%), Gaps = 5/62 (8%)
Query: 361 RIYDPAIPETSNKPDN--KVNTDRFSSTNTFHDTKIKKDETKTVIVEEPDL--DIVKTEP 416
R + P S KP++ +V + + S+++ H T++ KDE K ++ PD+ D+ EP
Sbjct: 162 REFSPGQSVNSLKPNSGDEVPSTKSSTSSEMH-TQLLKDEQKKILTPAPDVPHDVYCIEP 220
Query: 417 EI 418
+
Sbjct: 221 SL 222
>SPCC338.08 |ctp1|mug38|sequence orphan|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 285
Score = 28.7 bits (61), Expect = 2.6
Identities = 18/54 (33%), Positives = 31/54 (57%), Gaps = 4/54 (7%)
Query: 298 NAFKKTTQVT-GSLSERLKLIDTTPTGEDPYQL--GEADLREQSPIPKLMLQKS 348
+AF K V G++ E K +DT P G + ++ GE LR +SP ++L+++
Sbjct: 123 SAFVKPISVPLGNVKEE-KFLDTNPIGAESFESSDGEMHLRARSPEDMILLRET 175
>SPAC1D4.14 |tho2|SPAC22F3.14c|THO complex subunit Tho2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1628
Score = 28.7 bits (61), Expect = 2.6
Identities = 32/146 (21%), Positives = 58/146 (39%), Gaps = 9/146 (6%)
Query: 262 PETSKPAERPKKYERTNYSVHKKSKMINTYGKTKGLNAFKKTTQVTGSLSERLKLIDTTP 321
P + +E K N +V K+ + ++ + K +KTT R L TP
Sbjct: 1352 PSDAVASETDNKNLVENKAVEKRVEARSSANERKQEERRRKTTPE----GNRRALRTRTP 1407
Query: 322 TGED----PYQLGEADLREQSPIPKLMLQKSNRNRRCTETSTRRIYDPAIPETSNKPDNK 377
T ED +L E R+++P + ++N N R TRR A + +
Sbjct: 1408 TNEDIQRSDSKLREDQSRDRTPQSRSFTNENNDNLRSVSRHTRREPQQAQNLNARREHES 1467
Query: 378 VNTDRF-SSTNTFHDTKIKKDETKTV 402
+DR+ + N + ++ + + V
Sbjct: 1468 QKSDRWRQNGNVNRNPRVSNNNSTNV 1493
>SPAC1F3.03 |||Lgl family protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1004
Score = 28.7 bits (61), Expect = 2.6
Identities = 14/54 (25%), Positives = 29/54 (53%), Gaps = 2/54 (3%)
Query: 68 SEEKDLVVGSNTELRTKLNRMDKKVTINQRPNLNLPPPSANVPTPAVTSTVVKS 121
+EE D+++G +K++ ++ I+ RP ++ P P P++TS +S
Sbjct: 883 AEELDILLGGENRAESKVHTLETPKVISARPAESVKQPL--TPVPSMTSQSAQS 934
>SPAC12G12.03 |cip2||RNA-binding protein Cip2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 576
Score = 28.7 bits (61), Expect = 2.6
Identities = 27/97 (27%), Positives = 40/97 (41%), Gaps = 11/97 (11%)
Query: 78 NTELRTKLNR-MDKKVTINQRPNLNLPPPSANVPTPAVTSTVVKSEPNQVMFNSLTELLL 136
N+ T L+R M VT+ P P +PT V + S +V+F T L +
Sbjct: 202 NSASSTALSRGMSNSVTLTAPPE----PDEETIPTAIVIKNIPFSLKKEVLFKVFTALDI 257
Query: 137 PDNRTNPYYFNSDLNKS--KTLTQEPFNLPKVTETDV 171
P PY FN + + L F+ P+ +T V
Sbjct: 258 P----RPYAFNYHFDNGVFRGLAFANFHSPEEAKTVV 290
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 28.3 bits (60), Expect = 3.4
Identities = 13/45 (28%), Positives = 23/45 (51%)
Query: 98 PNLNLPPPSANVPTPAVTSTVVKSEPNQVMFNSLTELLLPDNRTN 142
P LPP NVP P++ +V + P+ V + LP ++++
Sbjct: 1481 PVSQLPPAVPNVPVPSMIPSVAQQPPSSVAPATAPSSTLPPSQSS 1525
>SPAC1B3.15c |||membrane transporter|Schizosaccharomyces pombe|chr
1|||Manual
Length = 628
Score = 28.3 bits (60), Expect = 3.4
Identities = 15/51 (29%), Positives = 25/51 (49%)
Query: 4 RSSVNETNLVNYSADLSTLNQLDTKESLLSFPFDHIYACHSESADRRQTLT 54
RS+ +V + S + + K ++ FPF IYAC SE + ++T
Sbjct: 578 RSNETMCGMVGIAIVASIVMHMVQKFNIRRFPFKRIYACLSERRKKELSVT 628
>SPCC736.14 |dis1||microtubule-associated protein Dis1
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 882
Score = 28.3 bits (60), Expect = 3.4
Identities = 14/45 (31%), Positives = 22/45 (48%)
Query: 74 VVGSNTELRTKLNRMDKKVTINQRPNLNLPPPSANVPTPAVTSTV 118
+VG + + K+ + K +T+N PN P V +P TS V
Sbjct: 514 IVGLDPKKLPKILELSKDITVNAHPNQPSRPRLPRVASPLKTSPV 558
>SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr
2|||Manual
Length = 3971
Score = 28.3 bits (60), Expect = 3.4
Identities = 40/184 (21%), Positives = 74/184 (40%), Gaps = 18/184 (9%)
Query: 1 MNSRSSVNETNLVNYSADLSTLNQLDTKESLLSFPFDHIYACHSESADRRQTLTLDKEVE 60
+NS + + + +VN S +++ L+T S+ S + + S + ++
Sbjct: 2346 LNSSTPITSSTVVNTSTPITSSTALNTSTSITS------SSVLNSSTPITSSTVVNTSTP 2399
Query: 61 ISTHCVVSEEKDLVVGSNTELRTKLNRMDKKVTINQRPNLNLPPPSANVPTPAVTSTVVK 120
I++ V++ + S+T + T + V + P + N TP +STVV
Sbjct: 2400 ITSSSVLNSSTPIT--SSTVVNTSTSITSSSVLNSSTPITS--SSVLNSSTPITSSTVVN 2455
Query: 121 SE---PNQVMFNSLTELLLPD--NRTNPYYFNSDLNKSKTLTQEPF---NLPKVTETDVT 172
S + + NS T + N + P +S LN S +T + P + T V
Sbjct: 2456 SSTPITSSSVLNSSTPITSSTALNTSTPITSSSVLNSSTPITSSTVVNTSTPITSSTVVN 2515
Query: 173 SYLP 176
S P
Sbjct: 2516 SSTP 2519
Score = 27.9 bits (59), Expect = 4.5
Identities = 37/198 (18%), Positives = 85/198 (42%), Gaps = 10/198 (5%)
Query: 1 MNSRSSVNETNLVNYSADLSTLNQLDTKESLLSFPFDHIYACHSESADRRQTLTLDKEVE 60
+NS +++ +++VN S +++ + L++ ++ S + + S+ + +
Sbjct: 3090 LNSSTAITSSSIVNSSTPITSSSVLNSSTAITSSSILNSSTPITSSSILNSSTPITSSTV 3149
Query: 61 ISTHCVVSEEKDLVVGSNTELRTKLNRMDKKVTINQRPNLNLPPPSANV---PTPAVTST 117
+++ ++ L + + LN +T + N + P S++V TP +ST
Sbjct: 3150 VNSSTPITSSTTLNTSTPITSSSVLN-SSTAITSSSIVNSSTPITSSSVLNSSTPITSST 3208
Query: 118 VVK-SEP--NQVMFNSLTELLLPD--NRTNPYYFNSDLNKSKTLTQEPFNLPKVTETDVT 172
+ S P + + NS T + N + P +S LN S +T + T +
Sbjct: 3209 TLNTSTPITSSSVLNSSTAITSSSVLNSSTPITSSSVLNSSTPITSSTV-VNTSTPITSS 3267
Query: 173 SYLPSDLTVPPMSILDTN 190
S L S + ++++T+
Sbjct: 3268 SVLNSSTPITSSTVVNTS 3285
>SPBC13G1.12 |did2||vacuolar sorting protein
Did2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 178
Score = 27.9 bits (59), Expect = 4.5
Identities = 12/19 (63%), Positives = 14/19 (73%)
Query: 95 NQRPNLNLPPPSANVPTPA 113
NQ N NL P+A+VPTPA
Sbjct: 143 NQNMNNNLSVPAASVPTPA 161
>SPAC1142.03c |swi2|SPAC17G6.20c|Swi5 complex subunit
Swi2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 722
Score = 27.9 bits (59), Expect = 4.5
Identities = 14/58 (24%), Positives = 26/58 (44%)
Query: 258 KTEKPETSKPAERPKKYERTNYSVHKKSKMINTYGKTKGLNAFKKTTQVTGSLSERLK 315
K E A RP+KY N ++ + + G+ G + + ++ +LS R+K
Sbjct: 208 KREMTRVKHRAGRPRKYSYVNKDLNFEEGLPRRRGRPTGWRKYPEKEEIYPTLSPRIK 265
>SPCC23B6.04c |||sec14 cytosolic factor family|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1008
Score = 27.9 bits (59), Expect = 4.5
Identities = 32/150 (21%), Positives = 62/150 (41%), Gaps = 13/150 (8%)
Query: 254 SSATKTEKPETSKPAERPKKYERTNYSVHKKSKMINTYGKTKGLNAFKKTTQVTGSLSER 313
S+++ + + S P P + +T S SKM NT A +KT G
Sbjct: 61 STSSTSNEVRKSVPVGNPTVHTKTGSSSSPASKMRNTVNLQHIQAANQKTRNAEGERKVA 120
Query: 314 LKLIDTTPTGEDPYQLGEADLREQSPIPKLMLQKSNRNRRCT--ETSTRRIYDPA----- 366
+ + + D + +A + +P + S + T ++ T R+
Sbjct: 121 QRRVQS-----DKAEANDAAMSSSAPTVDVSEGNSAAEPKITPDDSDTPRLNVDMNDKIN 175
Query: 367 IPETSNKPDNKVNTDRFSSTNTFHDTKIKK 396
+ E + K D+K+N D+ +ST T + +++K
Sbjct: 176 VDEAAAKSDSKLNVDQINST-TESEKRVEK 204
>SPAC1002.03c |gls2||glucosidase II Gls2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 923
Score = 27.9 bits (59), Expect = 4.5
Identities = 23/90 (25%), Positives = 44/90 (48%), Gaps = 8/90 (8%)
Query: 368 PETSNKPDNKVNTDRFSSTNTFHDTKIKKDETKTVIVEEPDLDIVKTEPEIDWRTYASTK 427
P++S P+ + N + + FHD+K K E+ + ++ D V PE + S+
Sbjct: 202 PKSSRTPEQEANGMWDETFDNFHDSKPKGPESVGLDIKFVDYGNVYGVPE-----HTSSL 256
Query: 428 AGNETSLCDFSYGENPNNIHIPSIDSMEFQ 457
+ ET+ D Y E P ++ ++D E++
Sbjct: 257 SLKETNNSDAGYTE-PYRLY--NVDLFEYE 283
>SPAC23E2.02 |lsd2|swm2, saf140|histone demethylase SWIRM2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1273
Score = 27.9 bits (59), Expect = 4.5
Identities = 20/55 (36%), Positives = 26/55 (47%), Gaps = 6/55 (10%)
Query: 422 TYASTKAGNETSLCDFSYGENPNNI----HIPSIDSMEFQDLFAP--DASLNLDN 470
T + N S+ S NP ++ HIPS + FQ LF+P D LNL N
Sbjct: 572 TQINHHTSNSNSISSNSTSLNPKDVTDPSHIPSAIDLGFQFLFSPMDDILLNLLN 626
>SPCC1919.01 |ppk34|SPCC830.12|serine/threonine protein kinase
Ppk34|Schizosaccharomyces pombe|chr 3|||Manual
Length = 354
Score = 27.9 bits (59), Expect = 4.5
Identities = 15/43 (34%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
Query: 469 DNLTAADFGITDKPPADKTKKRVGRTPSVMTPTIPFEEPLAPI 511
+NL DFG+ + P D K TP+ M P + F+ L I
Sbjct: 212 NNLCVIDFGLAEFLPKDGFVKPASGTPAFMAPEL-FDNELKKI 253
>SPBC21D10.06c |map4||cell agglutination protein
Map4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 948
Score = 27.5 bits (58), Expect = 6.0
Identities = 20/80 (25%), Positives = 35/80 (43%), Gaps = 1/80 (1%)
Query: 77 SNTELRTKL-NRMDKKVTINQRPNLNLPPPSANVPTPAVTSTVVKSEPNQVMFNSLTELL 135
SNT L + + + + T++ + S+N TP ST + S P ++ +S
Sbjct: 490 SNTTLHSSVQSSQSSQFTVSVPSSTQSYSTSSNFTTPITISTSLSSFPTTIVSSSFQYSS 549
Query: 136 LPDNRTNPYYFNSDLNKSKT 155
L N T +S L+ S +
Sbjct: 550 LSSNVTTTNAQSSSLSSSNS 569
>SPBC16G5.07c |||prohibitin |Schizosaccharomyces pombe|chr
2|||Manual
Length = 354
Score = 27.5 bits (58), Expect = 6.0
Identities = 13/42 (30%), Positives = 25/42 (59%), Gaps = 3/42 (7%)
Query: 489 KRVGRTPSVMTPTIPFEEPLAPITPVLPVVNAAPDVPIEMPT 530
+R+GR ++TP + F LAPI + +++ + +E+PT
Sbjct: 65 ERMGRFSRILTPGVAF---LAPIIDKIAYIHSLKERALEIPT 103
>SPAC31A2.12 |||arrestin/PY protein 1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 596
Score = 27.5 bits (58), Expect = 6.0
Identities = 23/86 (26%), Positives = 35/86 (40%), Gaps = 8/86 (9%)
Query: 431 ETSLCDFSYGENPNNIHIPSIDSMEFQDLFAPDASLNLDNLTAADFGITDKPPADKTKKR 490
E +L G +PN H PS + F P SL + + A + + P++ +
Sbjct: 401 ELALQQQPQGRSPNE-HSPS----NHPEDFPPSFSLGSNPSSGAASAVITRNPSETSLAD 455
Query: 491 VGRTPSVMTPT---IPFEEPLAPITP 513
+ R PS T +P E PL P
Sbjct: 456 LSRVPSYKEATRSAVPLESPLQSTLP 481
>SPBC530.05 |||transcription factor |Schizosaccharomyces pombe|chr
2|||Manual
Length = 743
Score = 27.1 bits (57), Expect = 7.9
Identities = 20/77 (25%), Positives = 36/77 (46%), Gaps = 3/77 (3%)
Query: 253 KSSATKTEKPETSKPAERPKKYERTNYSVHKKS--KMINTYGKTKGLNAFKKTTQVTGSL 310
KS ++ E+ E++ + P Y++ +H S K + TKG + +T L
Sbjct: 56 KSLVSRLEQMESTLRSVIPN-YDQQPDIIHPSSTPKNYHDLNCTKGETSSDDSTDDIAFL 114
Query: 311 SERLKLIDTTPTGEDPY 327
+E++ + TTP G Y
Sbjct: 115 NEKMGTLVTTPIGSQKY 131
>SPAC3C7.03c |rhp55||RecA family ATPase Rhp55|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 350
Score = 27.1 bits (57), Expect = 7.9
Identities = 16/49 (32%), Positives = 26/49 (53%), Gaps = 5/49 (10%)
Query: 44 SESADRRQTLTLDKEVEISTHCVVSEEKDLVVGSNTELRTKLNRMDKKV 92
S+S+ + TLTL+KE E S S++ N+ +T +NR K +
Sbjct: 182 SDSSQKENTLTLNKENEFS-----SKDDSNFAFHNSSTKTTINRRKKAI 225
>SPAC4F10.16c |||P-type ATPase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1367
Score = 27.1 bits (57), Expect = 7.9
Identities = 16/61 (26%), Positives = 28/61 (45%), Gaps = 6/61 (9%)
Query: 330 GEADLREQSPIPKLMLQKSNRNRRCTETSTRRIYDPAIPETSNK------PDNKVNTDRF 383
G + +QS ++ +K+ + S RRIY +IPE P NK+ T ++
Sbjct: 79 GSCNNSDQSWTSRVTSKKNEAGTESGDASVRRIYVTSIPEEHRHLPSQWFPSNKIRTTKY 138
Query: 384 S 384
+
Sbjct: 139 T 139
>SPBC902.04 |||RNA-binding protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 589
Score = 27.1 bits (57), Expect = 7.9
Identities = 20/77 (25%), Positives = 39/77 (50%), Gaps = 7/77 (9%)
Query: 120 KSEPNQVMFNSLTELLLPDNRTNPYYFNS-DLNKSKTLTQEPFNLPK---VTETDVTSYL 175
+ E Q+ ++ L + L + T P+ D+ + K+ + N+P VTE +V+ Y
Sbjct: 45 EEEVRQLCYSQLEDFLRQE--TIPFVDKIFDVLREKSYLEGASNMPSTGMVTE-EVSRYS 101
Query: 176 PSDLTVPPMSILDTNIN 192
P+ +P + ++TN N
Sbjct: 102 PTSSMIPATNSMETNFN 118
>SPBP19A11.02c |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 244
Score = 27.1 bits (57), Expect = 7.9
Identities = 22/93 (23%), Positives = 43/93 (46%), Gaps = 6/93 (6%)
Query: 103 PPPSANVPTPAVTSTVVKSEPNQVMFNSLTELLLP-----DNRTNPYYFNSDLNKSKTLT 157
P PSANV T + +S ++ + V ++T ++ P ++ T + +N + T+
Sbjct: 38 PLPSANVTTTSFSSASTETSTHSVTSTNITSIVPPPSTSHNSTTTTVPPTTSMNTTTTVP 97
Query: 158 QEPFNLPKVTETDVTSYLPSDLT-VPPMSILDT 189
T T+++ S T VPP + ++T
Sbjct: 98 PTTSLNTTTTTAPPTTHVNSTTTVVPPTTHVNT 130
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.309 0.127 0.360
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,783,759
Number of Sequences: 5004
Number of extensions: 122775
Number of successful extensions: 396
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 20
Number of HSP's that attempted gapping in prelim test: 357
Number of HSP's gapped (non-prelim): 54
length of query: 634
length of database: 2,362,478
effective HSP length: 77
effective length of query: 557
effective length of database: 1,977,170
effective search space: 1101283690
effective search space used: 1101283690
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.7 bits)
S2: 57 (27.1 bits)
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