Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000539-TA|BGIBMGA000539-PA|undefined
(634 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_8083| Best HMM Match : Lectin_C (HMM E-Value=3.8e-22) 36 0.099
SB_8084| Best HMM Match : EGF_CA (HMM E-Value=2.8026e-45) 36 0.13
SB_4237| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.17
SB_4314| Best HMM Match : 4_1_CTD (HMM E-Value=1.8) 35 0.23
SB_37973| Best HMM Match : ABC_tran (HMM E-Value=0) 33 0.53
SB_15878| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.70
SB_39230| Best HMM Match : SNF2_N (HMM E-Value=1.40004e-41) 32 1.2
SB_35900| Best HMM Match : EGF_CA (HMM E-Value=2.5e-38) 31 2.1
SB_57147| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 2.8
SB_52979| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 2.8
SB_44613| Best HMM Match : Glyco_hydro_53 (HMM E-Value=0.79) 31 2.8
SB_22350| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 2.8
SB_37122| Best HMM Match : rve (HMM E-Value=1.3) 31 2.8
SB_15263| Best HMM Match : Jun (HMM E-Value=1.8) 31 3.7
SB_26719| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 3.7
SB_40929| Best HMM Match : Attractin (HMM E-Value=5.1) 30 4.9
SB_6888| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 4.9
SB_4879| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 4.9
SB_3840| Best HMM Match : MANEC (HMM E-Value=0.031) 30 4.9
SB_52178| Best HMM Match : Drf_FH1 (HMM E-Value=2.2) 30 4.9
SB_36607| Best HMM Match : Vicilin_N (HMM E-Value=3.7) 30 4.9
SB_32754| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 4.9
SB_31688| Best HMM Match : WD40 (HMM E-Value=3.3e-10) 30 4.9
SB_39072| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 6.5
SB_34393| Best HMM Match : RVT_1 (HMM E-Value=2e-36) 30 6.5
SB_18092| Best HMM Match : Ly-6_related (HMM E-Value=1.5) 30 6.5
SB_44956| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 6.5
SB_47508| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 8.6
SB_45852| Best HMM Match : I-set (HMM E-Value=0) 29 8.6
SB_36859| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 8.6
SB_800| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 8.6
SB_45217| Best HMM Match : Linker_histone (HMM E-Value=4.4e-27) 29 8.6
SB_41396| Best HMM Match : Tymo_45kd_70kd (HMM E-Value=0.92) 29 8.6
SB_33873| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 8.6
>SB_8083| Best HMM Match : Lectin_C (HMM E-Value=3.8e-22)
Length = 3445
Score = 35.9 bits (79), Expect = 0.099
Identities = 34/164 (20%), Positives = 64/164 (39%), Gaps = 12/164 (7%)
Query: 367 IPETSNKPDNKVNTDRFSSTNTFHDTKIKKDETKTVIVEEPDLDIVKTEPEIDWRTYAST 426
+PET+ PD V + T DT ++ +T + E + + + + A T
Sbjct: 1645 VPETTFAPDTTVAPE----TTVMPDTTMRPPKTDVFVTEATKAPVDQLKTKQPTTATAKT 1700
Query: 427 KAGNETSLCDFSYGENPNNIHIPSIDSMEFQDLFAPDASLNLDNLTAADFGITDKPPADK 486
A ET++ P +P + + AP+++ ++ A + ++ +
Sbjct: 1701 TAAPETTVA-------PETTVVPET-TPALETTSAPESTAATESTVAPETTVSQETTVAP 1752
Query: 487 TKKRVGRTPSVMTPTIPFEEPLAPITPVLPVVNAAPDVPIEMPT 530
T + T+ E +AP T V P + AAPD + T
Sbjct: 1753 ETTVPTETTAAPETTLEPEITVAPETTVAPEITAAPDTTLAPET 1796
>SB_8084| Best HMM Match : EGF_CA (HMM E-Value=2.8026e-45)
Length = 3094
Score = 35.5 bits (78), Expect = 0.13
Identities = 44/174 (25%), Positives = 66/174 (37%), Gaps = 19/174 (10%)
Query: 367 IPETSNKPDNKVNTDRFSSTNTFHDTKIKKDETK---TVIVEEPDLDIVKTEP-EIDWRT 422
+PET+ P+ T T DT + D T T V E + T EI
Sbjct: 2635 VPETTLAPE----TTAAPETTMVPDTTVAPDTTDAPVTTFVPETTTALETTTALEITVEP 2690
Query: 423 YASTKAGNETSLCDFSYGENPNNIHIPSIDSMEFQDL-----FAPDASLNLDNLTAADFG 477
T A ET++ +P P I + + L AP++++ L++ A++
Sbjct: 2691 ETKTTAAPETTVAP-EITVSPETTVAPEITAAPYTTLAPETTLAPESTVALESTVASETT 2749
Query: 478 ITDKPPADKT-----KKRVGRTPSVMTPTIPFEEPLAPITPVLPVVNAAPDVPI 526
+ K A + T + T+ E AP T V P AAPD PI
Sbjct: 2750 VAPKTTAASEATLAPESVAPETTAAPESTLAPETTAAPETTVAPETTAAPDTPI 2803
Score = 29.5 bits (63), Expect = 8.6
Identities = 32/132 (24%), Positives = 54/132 (40%), Gaps = 9/132 (6%)
Query: 406 EPDLDIVKTEPEIDWRTYA-STKAGNETSLCDFSYGENPNNIHIPSIDSMEFQDLFAPDA 464
EP++ + + T A +T A ETS+ + + + + D+ AP
Sbjct: 730 EPEITVAPETTMVPETTAAPATTAVLETSIVPETTAASETTVAPETTDAPA--TTLAPKT 787
Query: 465 SLNLDNLTAADFGIT-DKPPADKTK---KRVGRTPSVMTP--TIPFEEPLAPITPVLPVV 518
+ L+ AA + + PA +T + T S + P T+P E AP T V P +
Sbjct: 788 TTALETTVAAKTTVVPETTPALETTSAPESTAATESTVAPETTVPTETAAAPDTTVAPEI 847
Query: 519 NAAPDVPIEMPT 530
AP+ + T
Sbjct: 848 TFAPETTVPPET 859
>SB_4237| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1438
Score = 35.1 bits (77), Expect = 0.17
Identities = 33/179 (18%), Positives = 72/179 (40%), Gaps = 7/179 (3%)
Query: 253 KSSATKTEKPETSKPAERPKKYERTNYSVHKKSKMINTYGKTKGLNAFKKTTQVTGSLSE 312
KS A + K T K K+ + + V K + + T KTK L ++ TG + E
Sbjct: 462 KSDAEEESKTITGKAPT--KEADMKSDEVDTKGEKVET--KTKELKESEEVEAETGQVEE 517
Query: 313 RLKLIDTTPTGEDPYQLGEADLREQSPIPKLMLQKSNRNRRCTETSTRRIYDPAIPETSN 372
+ ++I+T P + + + + +++ I + ++ E ++ +
Sbjct: 518 QAEMIETEPEVVEVH--ADEEKADKAKIEEAKSDEAEAQAEAIEAKVDKVEAEEEETQTE 575
Query: 373 KPDNKVNTDRFSSTNTFHDTKIKKDETKTVIVEEPDLDIVKTEPEIDWRTYASTKAGNE 431
P KV ++ D +E ++ EP++ + + E ++ + +A NE
Sbjct: 576 SPTEKVEEAEATAEVPIEDADTSTEEAESP-AAEPEVAVKEAEAPVEDDAFEEPEALNE 633
>SB_4314| Best HMM Match : 4_1_CTD (HMM E-Value=1.8)
Length = 922
Score = 34.7 bits (76), Expect = 0.23
Identities = 23/78 (29%), Positives = 32/78 (41%), Gaps = 3/78 (3%)
Query: 256 ATKTEKPETSKPAERPKKYERTNYSVHKKSKMINTYGKTKGLNAFKKTTQVTGSLSERLK 315
A KPE KP E KK E+ + K K N TK + KK G + + +K
Sbjct: 452 ANNATKPEVGKPTEPLKKTEKPPVAAKKPVKANNV---TKPVEVLKKADSFPGDVKKTVK 508
Query: 316 LIDTTPTGEDPYQLGEAD 333
I G+ L +A+
Sbjct: 509 SIPAKEVGKPMKDLKKAE 526
>SB_37973| Best HMM Match : ABC_tran (HMM E-Value=0)
Length = 3369
Score = 33.5 bits (73), Expect = 0.53
Identities = 14/33 (42%), Positives = 23/33 (69%), Gaps = 1/33 (3%)
Query: 96 QRPNLNLPPPSANVPTPAVTSTVVKSEPNQVMF 128
QRP ++ PPP A+ PTP V++ + ++P VM+
Sbjct: 1816 QRPEIS-PPPGASAPTPIVSAHGIGNQPVPVMY 1847
>SB_15878| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1929
Score = 33.1 bits (72), Expect = 0.70
Identities = 18/54 (33%), Positives = 26/54 (48%), Gaps = 3/54 (5%)
Query: 480 DKPPADKTKKRVGRTPSVMTPTIPFEEPL--APITPVLPVVNAAPDVPIEMPTN 531
D P D T + R P+ +P IP P +P P+ N +P++PI P N
Sbjct: 1299 DDEPNDSTNIPINR-PANDSPNIPINRPANDSPNIPINRPANDSPNIPINRPAN 1351
>SB_39230| Best HMM Match : SNF2_N (HMM E-Value=1.40004e-41)
Length = 1682
Score = 32.3 bits (70), Expect = 1.2
Identities = 29/172 (16%), Positives = 70/172 (40%), Gaps = 6/172 (3%)
Query: 254 SSATKTEKPETSKPAERPKKYERTNYSVHKKSKMINTYGKTKGLNAFKKTTQVTGSLSER 313
S + ++ TSK +P K E+ + + S +++ L+ KKTT + +
Sbjct: 595 SRSKQSNSDSTSKNRNKPVKMEKVSENDESDSDLVSKKQSGNNLSKNKKTTPLNTKYDSK 654
Query: 314 LKLIDTTPTGEDP--YQLGEADLREQSPIPKLMLQKSNRNRRCTETSTRRIYDPAIPETS 371
++ + +D + + + + K+ K R + +E+ +P P S
Sbjct: 655 SDESESEESSDDSEVKKRPKRNAKRNQKKGKMAKGKRKRVKEMSESEDENEEEPDTPSKS 714
Query: 372 --NKPDNKVNTDRFSSTNTFHDTKIKKDETKTVIVEEPDLDIVKTEPEIDWR 421
+ K+ TD T +++++ + ++ E ++ + P +DW+
Sbjct: 715 KGRRKIRKLLTDEKLGEETKKARRLEEERRQRLL--ERTQNLSEDMPSMDWK 764
>SB_35900| Best HMM Match : EGF_CA (HMM E-Value=2.5e-38)
Length = 839
Score = 31.5 bits (68), Expect = 2.1
Identities = 37/161 (22%), Positives = 57/161 (35%), Gaps = 16/161 (9%)
Query: 366 AIPETSNKPDNKVNTDRFSSTNTFHDTKIKKDETKTVIVEEPDLDIVKTEPEIDWRTYAS 425
A PET+ PD T +T + + T T P V TE +
Sbjct: 404 AAPETTGAPD----------TTLAPETTVALESTMTPESTVPPETTVATETTVA----PE 449
Query: 426 TKAGNETSLCDFSYGENPNNIHIPSIDSMEFQDLFAPDASLNLDNLTAADFGITDKPPAD 485
T A E++L P+ +P ++ + AP+ ++ + A +
Sbjct: 450 TTAAPESTLAP-EITAAPDTTMVPE-STVAPETTVAPETTVASETTVAPKTTAASEATLA 507
Query: 486 KTKKRVGRTPSVMTPTIPFEEPLAPITPVLPVVNAAPDVPI 526
T + T+ E AP+T V P AAPD PI
Sbjct: 508 PETTVAPETTAAPESTLALETTAAPVTTVAPETTAAPDTPI 548
>SB_57147| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1259
Score = 31.1 bits (67), Expect = 2.8
Identities = 20/86 (23%), Positives = 40/86 (46%), Gaps = 5/86 (5%)
Query: 312 ERLKLIDTTPTGEDPYQLGEADLREQSPIPKLM----LQKSNRNRRCTETSTRRIYDPAI 367
E+ KL DT G +++G A + + + S R R+ T + +++ +D +
Sbjct: 221 EKTKLTDTVDNGRKYFEMGTATYSSHTNGNNVSYVTDIANSRRQRKITYSKSKQ-FDQVL 279
Query: 368 PETSNKPDNKVNTDRFSSTNTFHDTK 393
N N+VN ++ NT ++T+
Sbjct: 280 TTFENSSRNRVNDTLTNNNNTRNNTE 305
>SB_52979| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 416
Score = 31.1 bits (67), Expect = 2.8
Identities = 27/78 (34%), Positives = 36/78 (46%), Gaps = 11/78 (14%)
Query: 120 KSEPNQ-VMFNSLTELLLPDNRTNPYYFNSDLNKSKTLTQEPFNLPKVTETDVTSYLPSD 178
K +P V FNS T L LP NR P S+L T P N+ + TSY
Sbjct: 119 KQQPGAPVQFNSSTYLELPSNRLTP----SNLTHGNQET--PSNIEVHSNQSATSY---- 168
Query: 179 LTVPPMSILDTNINLGDN 196
LT+P + N++L +N
Sbjct: 169 LTLPNNQVTHGNLDLPNN 186
>SB_44613| Best HMM Match : Glyco_hydro_53 (HMM E-Value=0.79)
Length = 696
Score = 31.1 bits (67), Expect = 2.8
Identities = 20/86 (23%), Positives = 40/86 (46%), Gaps = 5/86 (5%)
Query: 312 ERLKLIDTTPTGEDPYQLGEADLREQSPIPKLM----LQKSNRNRRCTETSTRRIYDPAI 367
E+ KL DT G +++G A + + + S R R+ T + +++ +D +
Sbjct: 221 EKTKLTDTVDNGRKYFEMGTATYSSHTNGNNVSYVTDIANSRRQRKITYSKSKQ-FDQVL 279
Query: 368 PETSNKPDNKVNTDRFSSTNTFHDTK 393
N N+VN ++ NT ++T+
Sbjct: 280 TTFENSSRNRVNDTLTNNNNTRNNTE 305
>SB_22350| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1967
Score = 31.1 bits (67), Expect = 2.8
Identities = 19/68 (27%), Positives = 34/68 (50%), Gaps = 1/68 (1%)
Query: 44 SESADRRQTLT-LDKEVEISTHCVVSEEKDLVVGSNTELRTKLNRMDKKVTINQRPNLNL 102
SE+ D Q + L+K++E ST + + L+ +NT R +LN ++K I+ L +
Sbjct: 1405 SETKDEPQIVVELEKQLEASTRALDKKNTQLIARNNTIKRLELNIIEKNKKIDDLEVLKM 1464
Query: 103 PPPSANVP 110
+ P
Sbjct: 1465 KSSTPLTP 1472
>SB_37122| Best HMM Match : rve (HMM E-Value=1.3)
Length = 152
Score = 31.1 bits (67), Expect = 2.8
Identities = 27/95 (28%), Positives = 39/95 (41%), Gaps = 4/95 (4%)
Query: 261 KPETSKPAERPKKYERTNYSVHKKSKMINTYGKTKGLNAFKKTTQVTGSLSERLKLIDTT 320
K E E KYER ++H M+ TY T + T +S R KL T
Sbjct: 53 KTERIATLEGKDKYERQE-AIHN---MLVTYRSTPQPATGVTPYEATRGVSVRTKLDYTP 108
Query: 321 PTGEDPYQLGEADLREQSPIPKLMLQKSNRNRRCT 355
PT E + D R++ K+ + N+N + T
Sbjct: 109 PTTERTAKKEAIDARDEEYKKKMKANRENKNTKET 143
>SB_15263| Best HMM Match : Jun (HMM E-Value=1.8)
Length = 315
Score = 30.7 bits (66), Expect = 3.7
Identities = 16/37 (43%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Query: 494 TPSVMTPTIPFEEPLAPITPVLPVVNAAPDV-PIEMP 529
T VMTPT P L PI+P+ P P + PI+ P
Sbjct: 141 TKPVMTPTTPAPMTLPPISPIDPPRTQPPPIFPIDPP 177
>SB_26719| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 334
Score = 30.7 bits (66), Expect = 3.7
Identities = 19/52 (36%), Positives = 28/52 (53%), Gaps = 5/52 (9%)
Query: 136 LPDNRTN---PYYFNSDLNKSKTLTQEPFNLPK--VTETDVTSYLPSDLTVP 182
+PD++ + P S +N +KT TQ P T+ +VTS P+D TVP
Sbjct: 190 IPDSKQDTEKPTTAESGVNGNKTTTQTDGTTPNPVATQGEVTSSTPTDCTVP 241
>SB_40929| Best HMM Match : Attractin (HMM E-Value=5.1)
Length = 566
Score = 30.3 bits (65), Expect = 4.9
Identities = 34/149 (22%), Positives = 56/149 (37%), Gaps = 10/149 (6%)
Query: 253 KSSATKTEKPETSKPAERPKKYERTNYSVHKKSKMINTYGKTKGLNAFKKTTQVTGSLSE 312
K S K K +T+KP ++ K+ R + +++ KTK K + S
Sbjct: 152 KPSKNKPSKNKTTKPQDQDKQDARPRQARPREASRKTKTSKTKRSKPQDKQAERQASRK- 210
Query: 313 RLKLIDTTPTGEDPYQLGEADLREQSPIPK-LMLQKSNRNRRCTETSTRRIYDPAIPETS 371
T +D +A + P K Q S++ + +T T R + P+
Sbjct: 211 -------TSKPKDKQAARQASRKTSKPQEKQAARQASSKTKTSRKTKTSRKTKTSKPQEK 263
Query: 372 NKPDNKVNTDRFSSTNTFHDTKIKKDETK 400
NK + R +S T TK K + K
Sbjct: 264 NKQEQDKQAARQASRKT-SKTKTSKPQEK 291
>SB_6888| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1257
Score = 30.3 bits (65), Expect = 4.9
Identities = 37/148 (25%), Positives = 68/148 (45%), Gaps = 9/148 (6%)
Query: 275 ERTNYSVHKKSKMINTY--GKTKGLNAFKKTTQ-VTGSLSERLKLIDTTPTGEDPYQLGE 331
E T S+++ +++T GK NA + T+ +T +L +R K + + YQ E
Sbjct: 411 ETTRKSLNEVKTLLSTLNDGKKAMENAIHENTKRLTQALFDREK--ELLQAVDLAYQNKE 468
Query: 332 ADLREQSPIPKLMLQKSNRNRRCTETSTR---RIYDPAIPETSNKPDNKV-NTDRFSSTN 387
LR++ +L+L++ N + CTE + + + I + + N+V NT R S+
Sbjct: 469 TLLRKEKEHLELILERLNGSCHCTEKAIKIGNELEMLVIQKHLKRKLNEVKNTRRDFSST 528
Query: 388 TFHDTKIKKDETKTVIVEEPDLDIVKTE 415
F E +V E DI+ ++
Sbjct: 529 EFRSVHYSVREDAVSLVRESMGDIIVSD 556
>SB_4879| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 607
Score = 30.3 bits (65), Expect = 4.9
Identities = 14/38 (36%), Positives = 19/38 (50%)
Query: 95 NQRPNLNLPPPSANVPTPAVTSTVVKSEPNQVMFNSLT 132
N R +L+ PPPS N T ++T+T P S T
Sbjct: 533 NNRSSLSQPPPSKNQTTASITTTSTTGNPTLPQEQSAT 570
>SB_3840| Best HMM Match : MANEC (HMM E-Value=0.031)
Length = 533
Score = 30.3 bits (65), Expect = 4.9
Identities = 21/60 (35%), Positives = 28/60 (46%), Gaps = 9/60 (15%)
Query: 480 DKPPADKTKKRVGRTPSVMT-----PTIPFEEPLAPITP----VLPVVNAAPDVPIEMPT 530
D PP +++R TPSV T P I P +TP +LP PD+P +PT
Sbjct: 162 DIPPIVTSEERNPDTPSVFTTKKVSPYIKSVLPTKKVTPDIQYILPTKEVTPDIPSIIPT 221
>SB_52178| Best HMM Match : Drf_FH1 (HMM E-Value=2.2)
Length = 404
Score = 30.3 bits (65), Expect = 4.9
Identities = 22/75 (29%), Positives = 34/75 (45%), Gaps = 2/75 (2%)
Query: 252 PKSSATKTEKPETSKPAERPKKYERTNYSVHKKSKMINTYG-KTKGLNAFKKTTQVTGSL 310
PK+S K +KP E+ K N K++K G KTK K + Q ++
Sbjct: 157 PKNSKLKAKKPPQKAKGEKTTKVGAKNLKSGKQTKEKQVKGEKTKVARVSKASAQAK-AM 215
Query: 311 SERLKLIDTTPTGED 325
S+ L + +TP +D
Sbjct: 216 SKVLTQLKSTPPVKD 230
>SB_36607| Best HMM Match : Vicilin_N (HMM E-Value=3.7)
Length = 567
Score = 30.3 bits (65), Expect = 4.9
Identities = 24/103 (23%), Positives = 42/103 (40%), Gaps = 4/103 (3%)
Query: 254 SSATKTEKPETS-KPAERPKKYERTNYSVHKKSKMINTYGKTKGLNAFKKTTQVTGSLSE 312
S TKT KP+ K AERP++ R + K + K A +KT++ +
Sbjct: 161 SRKTKTSKPQDQDKQAERPRQASRKKKTSKNKPSKMQDQDKQAARQASRKTSKPQDKQAA 220
Query: 313 RLKLIDTTPTGEDPYQLGEADLR---EQSPIPKLMLQKSNRNR 352
R + P +A + +Q+ P+ +K+ N+
Sbjct: 221 RPRQASRKTKTSKPQAARQASRKPQDKQAARPRQASRKTKTNK 263
>SB_32754| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 5659
Score = 30.3 bits (65), Expect = 4.9
Identities = 22/89 (24%), Positives = 36/89 (40%), Gaps = 6/89 (6%)
Query: 98 PNLNLPPPSANVPTPAVTSTVVKSEPNQVMFNSLTELLLPDNRTNPYYFNSDLNKSKTLT 157
P +PP + + P V S +EP+ T + P+ P + + T+T
Sbjct: 3133 PETTVPPETTDAPETTVASETT-AEPDTTQAPETT--VTPETTKAP---ETTVASETTVT 3186
Query: 158 QEPFNLPKVTETDVTSYLPSDLTVPPMSI 186
E P+ TE T+ +P VP +I
Sbjct: 3187 PETTVAPETTEEPETTVVPETTAVPETTI 3215
>SB_31688| Best HMM Match : WD40 (HMM E-Value=3.3e-10)
Length = 841
Score = 30.3 bits (65), Expect = 4.9
Identities = 23/89 (25%), Positives = 46/89 (51%), Gaps = 7/89 (7%)
Query: 106 SANVPTPAVTSTVVKSEPNQVMFNSLTELLLPDNRTNPYYFNSDLNKSKTLTQEPFNLPK 165
S + P+ S ++ S+PNQ+ + L+ P+ N S +N+S+T + N
Sbjct: 151 SQSSSNPSSQSEMLSSQPNQLSESYLSNQSAPNQSENSL---SSVNQSQTASNLSLN--- 204
Query: 166 VTETDVTSYL-PSDLTVPPMSILDTNINL 193
+ET V+++L P+ T S+L+ +++
Sbjct: 205 QSETIVSNFLEPASTTQASSSLLNEEVDV 233
>SB_39072| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1011
Score = 29.9 bits (64), Expect = 6.5
Identities = 18/53 (33%), Positives = 24/53 (45%), Gaps = 2/53 (3%)
Query: 479 TDKPPADKTKKRVGRTPSV-MTPTIPFEEPLAPITPVLPVVNAAPDVPIEMPT 530
T P+ + + TPS TP+ P P+ P TP P +AP PI T
Sbjct: 684 TPSTPSTPSTPSMPNTPSTPSTPSTP-STPITPGTPSTPSTPSAPGTPITPST 735
>SB_34393| Best HMM Match : RVT_1 (HMM E-Value=2e-36)
Length = 1198
Score = 29.9 bits (64), Expect = 6.5
Identities = 18/58 (31%), Positives = 28/58 (48%), Gaps = 3/58 (5%)
Query: 366 AIPETSNK-PDNKVNTDRFSSTNTFHDTKIKKDETKTVIVEEPDLDI-VKTEP-EIDW 420
A+P+T NK PD N D SS N + + E T + +P + ++ E E+ W
Sbjct: 68 AVPQTDNKLPDQDKNVDITSSENQVSEVEALMPEISTDYIRDPGWHVKLRVEKRELTW 125
>SB_18092| Best HMM Match : Ly-6_related (HMM E-Value=1.5)
Length = 139
Score = 29.9 bits (64), Expect = 6.5
Identities = 16/48 (33%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Query: 327 YQLGEADLREQSPIPKLMLQ-KSNRNRRCTETSTRRIYDPAIPETSNK 373
+ G DL +S + +L + ++ R CT STR +Y PE S K
Sbjct: 67 FDQGRVDLTYESSMTRLFREGRTETVRPCTNESTRFVYGMVNPELSKK 114
>SB_44956| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 736
Score = 29.9 bits (64), Expect = 6.5
Identities = 17/68 (25%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Query: 83 TKLNRMDKKVTINQRPNLNLPPPSANVPTPAVTSTVVKS-EPNQVMFNSLTELLLPDNRT 141
++++++ I+ NL + TP + + Q +FN+L + LP T
Sbjct: 394 SEISQLKDATIISATALQNLANAGKTLTTPTASCRETQQWSSGQELFNALVNVSLPRGTT 453
Query: 142 NPYYFNSD 149
P FNSD
Sbjct: 454 GPIAFNSD 461
>SB_47508| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2143
Score = 29.5 bits (63), Expect = 8.6
Identities = 22/87 (25%), Positives = 37/87 (42%), Gaps = 4/87 (4%)
Query: 47 ADRRQTLTLDKEVEISTHCVVSEEKDLVVGSNTELRTKLNRMDKKVTINQRPNLNLPPPS 106
A R L+ I + + +D +V S T R+++ D + P PPP+
Sbjct: 34 APREDALSAATSARIVSQAATDKHQDRLV-SETAARSRVETTDGPAAVIPPPPPP-PPPA 91
Query: 107 ANVPTPAVTSTVVKSEPNQVMFNSLTE 133
+NVP P V+ P +V+ T+
Sbjct: 92 SNVPAPPPPPPVM--PPQKVIMRKPTK 116
>SB_45852| Best HMM Match : I-set (HMM E-Value=0)
Length = 1122
Score = 29.5 bits (63), Expect = 8.6
Identities = 24/92 (26%), Positives = 42/92 (45%), Gaps = 3/92 (3%)
Query: 25 LDTKESLLSFPFDHIYACHSESADRRQTLTLDKEVEISTHC-VVSEEKDLVVGSNTELRT 83
L + ES S +D + +A +T+ ++E ++S +K+L+ N L
Sbjct: 297 LSSTESADSGRYDCVATNLKGTAMASSAITIHDKIEKRVAPKILSSKKNLIASENKRLFY 356
Query: 84 KLNRMDKKVTINQRPNLNLPPPSANVPTPAVT 115
+ + +TI + +L L PS P PAVT
Sbjct: 357 HI--IGGNITILEGKDLELQCPSIGTPKPAVT 386
>SB_36859| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 88
Score = 29.5 bits (63), Expect = 8.6
Identities = 16/45 (35%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
Query: 330 GEADLREQSPIPKLMLQ-KSNRNRRCTETSTRRIYDPAIPETSNK 373
G DL +S + +L + ++ R CT STR +Y PE S K
Sbjct: 19 GRVDLTYESSMTRLFREGRTETVRPCTNESTRFVYGMVNPELSKK 63
>SB_800| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 610
Score = 29.5 bits (63), Expect = 8.6
Identities = 17/43 (39%), Positives = 21/43 (48%), Gaps = 3/43 (6%)
Query: 483 PADKTKKRVGRTPSVMTPTIPFEEPLAPITPVLPVVNAAPDVP 525
P+D T V P+ PT+P +P P P P V A P VP
Sbjct: 431 PSDPTDPTVPSDPT--DPTVP-SDPTDPTVPSDPTVPAGPTVP 470
>SB_45217| Best HMM Match : Linker_histone (HMM E-Value=4.4e-27)
Length = 228
Score = 29.5 bits (63), Expect = 8.6
Identities = 37/168 (22%), Positives = 64/168 (38%), Gaps = 15/168 (8%)
Query: 273 KYERTNYSVHKKSKMINTYGKTKGLNAFKKTTQVTGSLSERLKLI-DTTPTGEDPYQLGE 331
KY + N+ V S+ + KG+++ + S KL DT GE + +
Sbjct: 41 KYVQANFDVGDNSEKLVKASLKKGVDSGRLVRTSGQGASGSFKLSQDTKKEGEMAEKKAK 100
Query: 332 ADLR--------EQSPIPKLMLQKSNRNRRCTETSTRRIYDPAIPETSNKPDNKVNTDRF 383
A R E + K+ K +R+ T+ S + +P P+ D T +
Sbjct: 101 AKERKLQKQLEKEAAEEEKVKKPKKSRDGEKTKKSKKVTSEPKSPKVKKSKDKSTKTTKK 160
Query: 384 SSTNTFHDTKIKKDETKTVIVEEPDLDIVKTEPEIDWRTYASTKAGNE 431
S D K K + K+ + KT + ++ S+KAG +
Sbjct: 161 S------DAKSPKKDAKSPTTTKKTSKTTKTAAKSPKKSEKSSKAGTK 202
>SB_41396| Best HMM Match : Tymo_45kd_70kd (HMM E-Value=0.92)
Length = 806
Score = 29.5 bits (63), Expect = 8.6
Identities = 29/115 (25%), Positives = 49/115 (42%), Gaps = 5/115 (4%)
Query: 13 VNYSADLSTLNQLDTKESLLSFPFDHIYACHSESADRRQTLTLDKEVEISTHCVVSEEKD 72
+N D +ESLL + + + + +D T+T EV ST S
Sbjct: 312 INILGDPGRCGDRAHRESLLPYSSSNTPSKQNPVSDSASTVTQSTEVTAST-VASSAANA 370
Query: 73 LVVGSNTELRTK-LNRMDKKVTINQRPNLNLPPPSANVPTPAVTSTVVKSEPNQV 126
VV + T+ TK LN++ + + + +LN P + P P + + + K P V
Sbjct: 371 GVVLTETQFATKSLNKI--RPSCKEPAHLNPLPMTTETP-PEIQAEMTKDTPQHV 422
>SB_33873| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1362
Score = 29.5 bits (63), Expect = 8.6
Identities = 25/82 (30%), Positives = 44/82 (53%), Gaps = 7/82 (8%)
Query: 43 HSESA-DRRQTL-TLDKEV-EISTHCVVSEEKDLVVGSNTELRTKL----NRMDKKVTIN 95
H +SA ++ +TL LD EV E+S SEE + ++ E+R +L +RM+ + +
Sbjct: 38 HRDSAKEKAETLRALDDEVIELSAEKEDSEELEAIITEGDEMRARLYEVIHRMEGLMALW 97
Query: 96 QRPNLNLPPPSANVPTPAVTST 117
+P P++ +PA +ST
Sbjct: 98 DQPASPAISPASLPSSPARSST 119
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.309 0.127 0.360
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,906,923
Number of Sequences: 59808
Number of extensions: 838950
Number of successful extensions: 2449
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 30
Number of HSP's that attempted gapping in prelim test: 2242
Number of HSP's gapped (non-prelim): 266
length of query: 634
length of database: 16,821,457
effective HSP length: 87
effective length of query: 547
effective length of database: 11,618,161
effective search space: 6355134067
effective search space used: 6355134067
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.7 bits)
S2: 63 (29.5 bits)
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