GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000539-TA|BGIBMGA000539-PA|undefined
         (634 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439060-4|CAD27755.1|  151|Anopheles gambiae putative sRNP prot...    26   2.6  
DQ437579-1|ABD96049.1|  575|Anopheles gambiae short neuropeptide...    25   6.1  
AJ292755-1|CAC00630.1|  837|Anopheles gambiae integrin beta subu...    25   6.1  
AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal...    25   8.1  
AJ276486-1|CAB90818.1|  364|Anopheles gambiae serine protease pr...    25   8.1  

>AJ439060-4|CAD27755.1|  151|Anopheles gambiae putative sRNP
           protein.
          Length = 151

 Score = 26.2 bits (55), Expect = 2.6
 Identities = 7/14 (50%), Positives = 13/14 (92%)

Query: 97  RPNLNLPPPSANVP 110
           +PN+++PPP+ N+P
Sbjct: 73  KPNISIPPPTMNMP 86


>DQ437579-1|ABD96049.1|  575|Anopheles gambiae short neuropeptide F
           receptor protein.
          Length = 575

 Score = 25.0 bits (52), Expect = 6.1
 Identities = 13/40 (32%), Positives = 18/40 (45%)

Query: 98  PNLNLPPPSANVPTPAVTSTVVKSEPNQVMFNSLTELLLP 137
           P L+LPPP      P+V S      P+ V+       L+P
Sbjct: 481 PPLSLPPPLTGAMLPSVQSAETVILPSGVLETPFDVQLIP 520


>AJ292755-1|CAC00630.1|  837|Anopheles gambiae integrin beta subunit
           protein.
          Length = 837

 Score = 25.0 bits (52), Expect = 6.1
 Identities = 9/23 (39%), Positives = 12/23 (52%)

Query: 574 TTPRGKKSPVPGKTTKKSYHSLM 596
           T P+  + P PG      YH+LM
Sbjct: 228 TVPKNLREPCPGCVAPYGYHNLM 250


>AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal
            growth factor receptorprotein.
          Length = 1433

 Score = 24.6 bits (51), Expect = 8.1
 Identities = 11/35 (31%), Positives = 20/35 (57%)

Query: 77   SNTELRTKLNRMDKKVTINQRPNLNLPPPSANVPT 111
            SN ++ + +   D+ +    RP++ LP PSA  P+
Sbjct: 1143 SNVDVPSTIAETDEYLQPKTRPSIMLPGPSAVEPS 1177


>AJ276486-1|CAB90818.1|  364|Anopheles gambiae serine protease
           protein.
          Length = 364

 Score = 24.6 bits (51), Expect = 8.1
 Identities = 23/99 (23%), Positives = 37/99 (37%), Gaps = 4/99 (4%)

Query: 325 DPYQLGEADLREQSPIPKLMLQKSNRNRRCTETS----TRRIYDPAIPETSNKPDNKVNT 380
           D    GE   R   P   L+     RNR   +      + R    A   T +KP+ K+  
Sbjct: 105 DRIYFGEETERGAHPWAALLFYNVGRNRTVPKCGGALISERYVITAAHCTVDKPNWKLLY 164

Query: 381 DRFSSTNTFHDTKIKKDETKTVIVEEPDLDIVKTEPEID 419
            RF+  NT        +  + +  E+  ++ +   PE D
Sbjct: 165 VRFNEFNTSSADNCTTENDEVICREDYAVESIVPHPEYD 203


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.309    0.127    0.360 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 581,805
Number of Sequences: 2123
Number of extensions: 23688
Number of successful extensions: 41
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 37
Number of HSP's gapped (non-prelim): 5
length of query: 634
length of database: 516,269
effective HSP length: 68
effective length of query: 566
effective length of database: 371,905
effective search space: 210498230
effective search space used: 210498230
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.7 bits)
S2: 51 (24.6 bits)