Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000538-TA|BGIBMGA000538-PA|IPR004481|K+-dependent
Na+/Ca+ exchanger related-protein, IPR004836|Sodium/calcium exchanger
protein, IPR004837|Sodium/calcium exchanger membrane region
(459 letters)
Database: tribolium
317 sequences; 114,650 total letters
Searching....................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ... 25 0.84
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ... 25 0.84
EF117815-1|ABO38438.1| 535|Tribolium castaneum cryptochrome 2 p... 25 1.1
DQ659252-1|ABG47450.1| 377|Tribolium castaneum chitinase 13 pro... 24 1.9
AM292377-1|CAL23189.2| 358|Tribolium castaneum gustatory recept... 24 2.6
AM292342-1|CAL23154.2| 386|Tribolium castaneum gustatory recept... 24 2.6
AY337337-1|AAP94192.1| 505|Tribolium castaneum cytochrome P450 ... 23 5.9
AM292326-1|CAL23138.2| 522|Tribolium castaneum gustatory recept... 23 5.9
AF254755-1|AAF70496.1| 505|Tribolium castaneum cytochrome P450 ... 23 5.9
>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
protein.
Length = 1464
Score = 25.4 bits (53), Expect = 0.84
Identities = 22/84 (26%), Positives = 38/84 (45%), Gaps = 8/84 (9%)
Query: 36 VGTIVG-SAVFNILAVAACCGIGAGMVVPLDWWPLTRDCLAYGITVSILICIIHDEYVQW 94
+GT++G +F +L A G LD W L I V IL+C +Q
Sbjct: 891 IGTVIGPGTIFLMLVGAFVAAFG------LDQWSSFYWNLL-PIAVFILVCATCSSDIQL 943
Query: 95 YEAFLLVSLYGVYICIMYYDKPIQ 118
+ A L+ ++YG+ + ++ +Q
Sbjct: 944 FFAGLISAIYGLIMMAVFVGVMLQ 967
>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
CHS2 protein.
Length = 1464
Score = 25.4 bits (53), Expect = 0.84
Identities = 22/84 (26%), Positives = 38/84 (45%), Gaps = 8/84 (9%)
Query: 36 VGTIVG-SAVFNILAVAACCGIGAGMVVPLDWWPLTRDCLAYGITVSILICIIHDEYVQW 94
+GT++G +F +L A G LD W L I V IL+C +Q
Sbjct: 891 IGTVIGPGTIFLMLVGAFVAAFG------LDQWSSFYWNLL-PIAVFILVCATCSSDIQL 943
Query: 95 YEAFLLVSLYGVYICIMYYDKPIQ 118
+ A L+ ++YG+ + ++ +Q
Sbjct: 944 FFAGLISAIYGLIMMAVFVGVMLQ 967
>EF117815-1|ABO38438.1| 535|Tribolium castaneum cryptochrome 2
protein.
Length = 535
Score = 25.0 bits (52), Expect = 1.1
Identities = 12/38 (31%), Positives = 19/38 (50%)
Query: 23 NVIGTFITEGDIGVGTIVGSAVFNILAVAACCGIGAGM 60
+ + F+T GD+ + G VF L + A + AGM
Sbjct: 372 HAVACFLTRGDLWLSWEEGMKVFEELLLDADWSVNAGM 409
>DQ659252-1|ABG47450.1| 377|Tribolium castaneum chitinase 13
protein.
Length = 377
Score = 24.2 bits (50), Expect = 1.9
Identities = 9/19 (47%), Positives = 12/19 (63%)
Query: 373 ASLTPAEPGHYWVKINSMG 391
A+ P EPG Y V + S+G
Sbjct: 275 ATAAPGEPGPYTVNLGSLG 293
>AM292377-1|CAL23189.2| 358|Tribolium castaneum gustatory
receptor candidate 56 protein.
Length = 358
Score = 23.8 bits (49), Expect = 2.6
Identities = 9/18 (50%), Positives = 11/18 (61%)
Query: 66 WWPLTRDCLAYGITVSIL 83
WWPLTR+ L I + L
Sbjct: 51 WWPLTRNALLVLILLGAL 68
>AM292342-1|CAL23154.2| 386|Tribolium castaneum gustatory
receptor candidate 21 protein.
Length = 386
Score = 23.8 bits (49), Expect = 2.6
Identities = 9/18 (50%), Positives = 11/18 (61%)
Query: 66 WWPLTRDCLAYGITVSIL 83
WWPLTR+ L I + L
Sbjct: 51 WWPLTRNALLVLILLGAL 68
>AY337337-1|AAP94192.1| 505|Tribolium castaneum cytochrome P450
monooxygenase protein.
Length = 505
Score = 22.6 bits (46), Expect = 5.9
Identities = 17/56 (30%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Query: 131 MFKDNEEKQDAENGKDLKLSTHILKIDVPIEQRHQHNGNIKTSPLRQDAKE-KILE 185
MF+ ++ A + L+ H D +E+ ++ G+IK P QD +E K LE
Sbjct: 310 MFEGHDTTAAALGFALMVLAGHKEVQDKIVEEMNEVLGDIKKKPTYQDLQEMKYLE 365
>AM292326-1|CAL23138.2| 522|Tribolium castaneum gustatory receptor
candidate 5 protein.
Length = 522
Score = 22.6 bits (46), Expect = 5.9
Identities = 9/26 (34%), Positives = 14/26 (53%)
Query: 90 EYVQWYEAFLLVSLYGVYICIMYYDK 115
EY Q Y F++ + V+IC + K
Sbjct: 433 EYFQMYAQFIVGTFNSVFICDLIEQK 458
>AF254755-1|AAF70496.1| 505|Tribolium castaneum cytochrome P450
monooxigenase CYP4Q7 protein.
Length = 505
Score = 22.6 bits (46), Expect = 5.9
Identities = 17/56 (30%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Query: 131 MFKDNEEKQDAENGKDLKLSTHILKIDVPIEQRHQHNGNIKTSPLRQDAKE-KILE 185
MF+ ++ A + L+ H D +E+ ++ G+IK P QD +E K LE
Sbjct: 310 MFEGHDTTAAALGFALMVLAGHKEVQDKIVEEMNEVLGDIKKKPTYQDLQEMKYLE 365
Database: tribolium
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 114,650
Number of sequences in database: 317
Lambda K H
0.322 0.138 0.435
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 104,160
Number of Sequences: 317
Number of extensions: 4692
Number of successful extensions: 14
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 7
Number of HSP's gapped (non-prelim): 9
length of query: 459
length of database: 114,650
effective HSP length: 59
effective length of query: 400
effective length of database: 95,947
effective search space: 38378800
effective search space used: 38378800
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 45 (22.2 bits)
- SilkBase 1999-2023 -