Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000538-TA|BGIBMGA000538-PA|IPR004481|K+-dependent
Na+/Ca+ exchanger related-protein, IPR004836|Sodium/calcium exchanger
protein, IPR004837|Sodium/calcium exchanger membrane region
(459 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC3A12.06c |||sodium/calcium exchanger |Schizosaccharomyces po... 50 7e-07
SPAC8E11.05c |||conserved fungal protein|Schizosaccharomyces pom... 34 0.048
SPBC16E9.02c |||CUE domain protein Cue5 |Schizosaccharomyces pom... 33 0.063
SPCC1795.02c ||SPCC895.01|CaCA proton/calcium exchanger|Schizosa... 32 0.19
SPAC10F6.01c ||SPAC4C5.05c|sulfite reductase beta subunit |Schiz... 31 0.34
SPCP25A2.03 |||THO complex subunit |Schizosaccharomyces pombe|ch... 31 0.34
SPAC1142.01 ||SPAC17G6.18|DUF654 family protein|Schizosaccharomy... 31 0.45
SPAC17C9.03 |tif471||translation initiation factor eIF4G |Schizo... 30 0.78
SPBC32H8.01c ||SPBP22H7.10c|conserved fungal protein|Schizosacch... 29 1.8
SPBC13G1.08c |ash2||Ash2-trithorax family protein|Schizosaccharo... 28 2.4
SPBC3D6.09 |dpb4||DNA polymerase epsilon subunit Dpb4 |Schizosac... 28 2.4
SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr 1|||M... 27 4.2
SPAC227.02c |||rRNA processing protein Rrp15 |Schizosaccharomyce... 27 4.2
SPAC6G9.12 |cfr1||Chs five related protein Cfr1|Schizosaccharomy... 27 4.2
SPBC649.05 |cut12|stf1|spindle pole body protein Cut12 |Schizosa... 27 5.5
SPBC29B5.04c |||conserved fungal protein|Schizosaccharomyces pom... 27 5.5
SPBC530.14c |dsk1||SR protein-specific kinase Dsk1|Schizosacchar... 27 5.5
SPAC29A4.09 |||rRNA processing protein Rrp17|Schizosaccharomyces... 27 5.5
SPBC25B2.09c |||arginine-tRNA ligase|Schizosaccharomyces pombe|c... 27 5.5
SPBP4H10.06c |cut14|smc2, smc2|condensin subunit Cut14|Schizosac... 27 7.3
SPAC1486.05 |nup189||nucleoporin Nup189|Schizosaccharomyces pomb... 27 7.3
SPAC23H4.08 |||RNA polymerase II associated protein |Schizosacch... 27 7.3
SPBC1685.08 |||histone deacetylase complex subunit Cti6|Schizosa... 27 7.3
SPAC1952.05 |gcn5||histone acetyltransferase Gcn5|Schizosaccharo... 26 9.6
SPAC1A6.04c |plb1||phospholipase B homolog Plb1|Schizosaccharomy... 26 9.6
SPAC1142.08 |fhl1|SPAC8C9.01|fork head transcription factor Fhl1... 26 9.6
SPBC1773.07c |sbp1|yrb1|Ran GTPase binding protein Sbp1|Schizosa... 26 9.6
SPCC553.08c |||GTPase Ria1 |Schizosaccharomyces pombe|chr 3|||Ma... 26 9.6
SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyce... 26 9.6
>SPAC3A12.06c |||sodium/calcium exchanger |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 743
Score = 50.0 bits (114), Expect = 7e-07
Identities = 25/101 (24%), Positives = 54/101 (53%), Gaps = 2/101 (1%)
Query: 269 LFTIPDCEKP-RFKNWFP-LTFIMCIVWIGSLSYIVAWMITIIGDTLMIPDSVMGITFLA 326
L+ D EKP +F W + F++ I+WI +++ V ++ +G + +S++G+T A
Sbjct: 568 LYYYTDEEKPPKFLPWVSFIGFVLGIIWISTIANEVVGILRALGVIFNLNESILGLTVFA 627
Query: 327 AGTSVPEAVSSVIVAKQXXXXXXXXXXXXXXTFDILLCLGL 367
AG S+ + ++ +++A+ T +IL+ +G+
Sbjct: 628 AGNSLSDLIADIMIARSGFPEMAMGGVFGGPTLNILIGIGI 668
Score = 38.7 bits (86), Expect = 0.002
Identities = 24/92 (26%), Positives = 39/92 (42%), Gaps = 1/92 (1%)
Query: 286 LTFIMCIVWIGSLSYIVAWMITIIGDTLMIPDSVMGITFLAAGTSVPEAVSSVIVAKQXX 345
L F+ + I + + ++TI L +PDSV+G+TFLA G P+ +S+ +
Sbjct: 119 LIFLFITIGISASDFFSTNLVTISW-LLQLPDSVVGVTFLALGNGSPDILSTFAAVRVNS 177
Query: 346 XXXXXXXXXXXXTFDILLCLGLPWLIKASLTP 377
F + + G LIK P
Sbjct: 178 GGMAIGELLGSAFFIVAIVAGSVCLIKPFKIP 209
Score = 33.9 bits (74), Expect = 0.048
Identities = 16/96 (16%), Positives = 45/96 (46%), Gaps = 1/96 (1%)
Query: 18 PELFVNVIGTFITEGDIGVGTIVGSAVFNILAVAACCGIGAGMVVPLDWWPLTRDCLAYG 77
P++ + G + +G ++GSA F + VA + +P + L G
Sbjct: 164 PDILSTFAAVRVNSGGMAIGELLGSAFFIVAIVAGSVCLIKPFKIPRRHF-LRDVAFLTG 222
Query: 78 ITVSILICIIHDEYVQWYEAFLLVSLYGVYICIMYY 113
+ +++ ++HD + +++ +++ Y +Y+ +++
Sbjct: 223 TILLVIMFVLHDGSLSIWQSLVMILYYLLYVLFVFF 258
>SPAC8E11.05c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 338
Score = 33.9 bits (74), Expect = 0.048
Identities = 26/85 (30%), Positives = 42/85 (49%), Gaps = 7/85 (8%)
Query: 136 EEKQDAENGKDLKLSTHILKID--VPIEQRHQHNGN-IKTSPLRQDAKEKI-LESVDVSD 191
+E D E G D K+ H+L+ D P+E N ++ S L DA + ES+ ++
Sbjct: 40 KEDVDGEEGADTKIDPHLLEEDDLNPVEDYDSKNQKVVEASKLDLDATSTVWAESLSINR 99
Query: 192 KVSASEEGKDKNVNIDMDSKPNEME 216
+ S S+ G V+ +M+ K E E
Sbjct: 100 EASISQSG---IVDNEMEKKVEEEE 121
>SPBC16E9.02c |||CUE domain protein Cue5 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 569
Score = 33.5 bits (73), Expect = 0.063
Identities = 21/105 (20%), Positives = 49/105 (46%), Gaps = 1/105 (0%)
Query: 136 EEKQDAENGKDLKLSTHILKIDVPIEQRHQHNGNIKTSPLRQDAKEKILESVDVSDKVSA 195
EEK D K+ K + + +E++ N T D K K +S++ +DK
Sbjct: 415 EEKSDVGEEKESKDENNKASLHKDVEEKDTKITNEDTGKTETDVKAKETDSIEANDKDEK 474
Query: 196 SEEGKDKNVNIDMDSKPNEMEIASPEENLYQPTAEDNTDVEDGSE 240
++ + ++ + +SK +++ A +++ E+ TD ++ ++
Sbjct: 475 TDSKETEDKVEETESKEADVK-AKETDSIEVDDKEEKTDSKETAD 518
Score = 30.7 bits (66), Expect = 0.45
Identities = 22/113 (19%), Positives = 45/113 (39%), Gaps = 1/113 (0%)
Query: 129 SNMFKDNEEKQDAENGKDL-KLSTHILKIDVPIEQRHQHNGNIKTSPLRQDAKEKILESV 187
+++ KD EEK +D K T + + + + + + +E +
Sbjct: 433 ASLHKDVEEKDTKITNEDTGKTETDVKAKETDSIEANDKDEKTDSKETEDKVEETESKEA 492
Query: 188 DVSDKVSASEEGKDKNVNIDMDSKPNEMEIASPEENLYQPTAEDNTDVEDGSE 240
DV K + S E DK D +++E ++ +P +DN + + +E
Sbjct: 493 DVKAKETDSIEVDDKEEKTDSKETADKVEQTDSKDTNEKPAKDDNKEANEKAE 545
>SPCC1795.02c ||SPCC895.01|CaCA proton/calcium
exchanger|Schizosaccharomyces pombe|chr 3|||Manual
Length = 412
Score = 31.9 bits (69), Expect = 0.19
Identities = 19/92 (20%), Positives = 46/92 (50%), Gaps = 3/92 (3%)
Query: 24 VIGTFITEGDIGVGTIVGSAVFNILAVAACCGIGAGMVV--PLDWWPLTRDCLAYGITVS 81
++ ++ + D+ +G +GS++ L +A I G ++ PL + + + + ++V
Sbjct: 319 IVVSYRGQMDLALGVAIGSSIQIALFLAPFLVI-VGWIISQPLTLYFESLETVILFVSVF 377
Query: 82 ILICIIHDEYVQWYEAFLLVSLYGVYICIMYY 113
++ +I D W E L++LY + + +Y
Sbjct: 378 LVNYLIQDGATHWLEGVQLLALYAIVVLAFFY 409
>SPAC10F6.01c ||SPAC4C5.05c|sulfite reductase beta subunit
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1473
Score = 31.1 bits (67), Expect = 0.34
Identities = 21/76 (27%), Positives = 35/76 (46%), Gaps = 1/76 (1%)
Query: 147 LKLSTHILKIDVPIEQRHQHNGNIKTSPLRQDAKEKILESVDVSDKVSASE-EGKDKNVN 205
LKL+T +L P+ NI+T P ++DA+ + + + +K SE EG K
Sbjct: 171 LKLNTGVLHFYSPVYDTTAALENIETLPSKEDAQHARVAHIPIEEKQEDSEKEGNIKEAF 230
Query: 206 IDMDSKPNEMEIASPE 221
+ E + A+ E
Sbjct: 231 VPPKFDQPERDAATSE 246
>SPCP25A2.03 |||THO complex subunit |Schizosaccharomyces pombe|chr
3|||Manual
Length = 752
Score = 31.1 bits (67), Expect = 0.34
Identities = 27/92 (29%), Positives = 42/92 (45%), Gaps = 8/92 (8%)
Query: 165 QHNGNIKTSPLRQDAKEKILESVDVSDKVSASEEGKDKNVNIDMDSKPNEMEIASP--EE 222
+HN SP++ DA+ I+++ + + V EEGK KN + KP + S E
Sbjct: 574 KHNSQNFASPMQTDAEGDIVQNEEEKESVEV-EEGKHKNDLPKVSPKPPTEGVDSEVNGE 632
Query: 223 NLYQ-----PTAEDNTDVEDGSENSLWKWPSN 249
+L Q + +DNT +S K P N
Sbjct: 633 SLVQVNKVLKSEDDNTSEASKDPSSHVKSPEN 664
>SPAC1142.01 ||SPAC17G6.18|DUF654 family protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 667
Score = 30.7 bits (66), Expect = 0.45
Identities = 39/149 (26%), Positives = 72/149 (48%), Gaps = 13/149 (8%)
Query: 120 FAKGSWKWVSNMFKDNEEKQDAENGKDLKLSTH------ILKIDVPIEQRHQHNGNIKTS 173
F+ S K V N+F+ E++ +A N + K + +++ + PI ++ N K
Sbjct: 43 FSSTSGKKVVNVFEILEKENNAINSEAEKSVSEEEQDEPLVEGESPIVSTNKKAKN-KKK 101
Query: 174 PLRQDAKEKILESVDVSDKVSASE--EGKDKNVNIDMDSKPNEMEIASPEENLYQPTAED 231
+Q K+K+ D+ ++ S +E EG + + NID D +E+E A+ E L + +D
Sbjct: 102 KKKQQKKKKVTGKRDLDNQSSDNEKLEGLESSKNIDDDI--DEIEKAAAELKL-KYREQD 158
Query: 232 NTDVEDGSENSLWKWPSNKSCLAKITKIV 260
+ G E S P +K K+ K++
Sbjct: 159 QVEHVAGVEESA-TIPLDKELDEKLNKLL 186
>SPAC17C9.03 |tif471||translation initiation factor eIF4G
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1403
Score = 29.9 bits (64), Expect = 0.78
Identities = 21/67 (31%), Positives = 31/67 (46%), Gaps = 6/67 (8%)
Query: 176 RQDAKEKILESVDVSDKVSASEEGK---DKNVNIDMDSKPNEMEI---ASPEENLYQPTA 229
+++A+EK+ + + K A EEGK DKN I + E S + N +P
Sbjct: 682 KREAEEKVKRETEENAKRKAEEEGKREADKNPEIKSSAPLASSEANVDTSKQTNATEPEV 741
Query: 230 EDNTDVE 236
D T VE
Sbjct: 742 VDKTKVE 748
>SPBC32H8.01c ||SPBP22H7.10c|conserved fungal
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 187
Score = 28.7 bits (61), Expect = 1.8
Identities = 16/52 (30%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
Query: 189 VSDKVSASE-EGKDKNVNIDMDSKPNEMEIASPEENLYQPTAEDNTDVEDGS 239
V++K+ ++ E KD++ N++ D+ N E + E NL E DV+ S
Sbjct: 70 VTNKIDTNKLEAKDESKNVEKDATGNPQE-SKQEPNLEVQQTEKEKDVDSAS 120
>SPBC13G1.08c |ash2||Ash2-trithorax family
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 652
Score = 28.3 bits (60), Expect = 2.4
Identities = 15/50 (30%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
Query: 174 PLRQDAKEKILESV--DVSDKVSASEEGKDKNVNIDMDSKPNEMEIASPE 221
P+ + E+I E V D+ D++ +E+ +V ID+ +PN PE
Sbjct: 597 PVSERYNEQIAEDVLCDILDEIDYAEDPNTSSVTIDVPQEPNAGITIIPE 646
>SPBC3D6.09 |dpb4||DNA polymerase epsilon subunit Dpb4
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 210
Score = 28.3 bits (60), Expect = 2.4
Identities = 20/62 (32%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
Query: 180 KEKILESVDVSDKVSASEEGKDKNVNIDMDSKPNEMEIASPEENLYQPTAEDN-TDVEDG 238
KEK L+ +VSD + + D + +D + +E+E E++ Q E N DVED
Sbjct: 104 KEKRLKLPNVSDVDNRKKAKIDAHDTTPLDEEKDELEEERIAEDIAQNEVEQNIDDVEDL 163
Query: 239 SE 240
E
Sbjct: 164 EE 165
>SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr
1|||Manual
Length = 500
Score = 27.5 bits (58), Expect = 4.2
Identities = 26/128 (20%), Positives = 55/128 (42%), Gaps = 4/128 (3%)
Query: 133 KDNEEKQDAENGKDLKLSTHILKIDVPIEQRHQHNGNI--KTSPLRQDAKEKILESVDVS 190
K E+K+ + S + V IE++ + + + ++S +++ ES +
Sbjct: 129 KTEEKKESSSESSSSSESEEEEEAVVKIEEKKESSSDSSSESSSSESESESSSSESEEEE 188
Query: 191 DKVSASEEGKDKNVNIDMDSKPNEMEIASPEENLYQPTAEDNTDVEDGSENSLWKWPSNK 250
+ V +EE K+ + DS+ + + ++ +E + ED E P+++
Sbjct: 189 EVVEKTEEKKEGSSESSSDSESSSDSSSESGDSDSSSDSESESSSED--EKKRKAEPASE 246
Query: 251 SCLAKITK 258
AKITK
Sbjct: 247 ERPAKITK 254
>SPAC227.02c |||rRNA processing protein Rrp15 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 205
Score = 27.5 bits (58), Expect = 4.2
Identities = 14/60 (23%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Query: 184 LESVDVSDKVSASEEGKDKNVNIDMDSKPNEMEIASPEENLYQPTAEDNTDVEDGSENSL 243
+++ D+S VS ++ K V D ++ E+E + E+ YQ + ++ E+ E+++
Sbjct: 9 IKNEDISF-VSQEDDSSKKFVKDDSENSEEELEDLNSEDEFYQSNSSEDEIEEEVQESTI 67
>SPAC6G9.12 |cfr1||Chs five related protein Cfr1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 620
Score = 27.5 bits (58), Expect = 4.2
Identities = 16/61 (26%), Positives = 33/61 (54%), Gaps = 2/61 (3%)
Query: 178 DAKEKILESVDVSDKVSASE--EGKDKNVNIDMDSKPNEMEIASPEENLYQPTAEDNTDV 235
+A++ I S D+ + +S+ E + NI D N + +PEE++ AE+++++
Sbjct: 334 EAEQSIDVSSDIGLRSDSSKPNEAPTSSENIKADQPENSTKQENPEEDMQIKDAEEHSNL 393
Query: 236 E 236
E
Sbjct: 394 E 394
>SPBC649.05 |cut12|stf1|spindle pole body protein Cut12
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 548
Score = 27.1 bits (57), Expect = 5.5
Identities = 25/104 (24%), Positives = 41/104 (39%), Gaps = 1/104 (0%)
Query: 142 ENGKDLKLSTHILKIDVPIEQRHQHNGNIKTSPLRQDAKEKILESVDVSDKVSASEEGKD 201
E+ K+ S L DVP ++++ H+ + + S + D+ S + D
Sbjct: 159 ESYKNETKSNQRLGEDVPSKKKYPHSMDAEISKFKWDSNNNNDWSSLMKDCFRDVVNNNR 218
Query: 202 KNVNIDMDSKPNEMEIASPEENLYQPTAEDNTDVEDGSENSLWK 245
K I D + + A P E+L +P N D S WK
Sbjct: 219 KMKEIIKDVMIDTSQ-AFPSESLDEPDYTINLDAPRSSSGKYWK 261
>SPBC29B5.04c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 605
Score = 27.1 bits (57), Expect = 5.5
Identities = 26/108 (24%), Positives = 48/108 (44%), Gaps = 14/108 (12%)
Query: 137 EKQDAEN-GKDLKLSTHILKIDVPIEQRHQHNGNIKTSPLRQDAKEKILESVDVSDKVSA 195
E D N G+ +L ++L+ V + + + G T P + D + VD ++
Sbjct: 55 ENPDLNNLGRKDRLMLNLLRRYVGLPPKSKETG---TYPEKDDENTNLQVVVDTKAQL-- 109
Query: 196 SEEGKDKNVNIDMDSKPNEMEIASPEENLYQPTAEDNTDVEDGSENSL 243
NVN++ D KPN++E++S + P +T +D N +
Sbjct: 110 -------NVNVN-DGKPNDIELSSTSKTENDPPLSLHTTPDDLQGNGV 149
>SPBC530.14c |dsk1||SR protein-specific kinase
Dsk1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 544
Score = 27.1 bits (57), Expect = 5.5
Identities = 15/40 (37%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Query: 185 ESVD-VSDKVSASEEGKDKNVNIDMDSKPNEMEIASPEEN 223
E VD VS+KV + + +K VN ++D K ++ + EEN
Sbjct: 19 EIVDHVSEKVITNGKNVNKKVNAEVDGKSMVEKVKTHEEN 58
>SPAC29A4.09 |||rRNA processing protein Rrp17|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 203
Score = 27.1 bits (57), Expect = 5.5
Identities = 22/111 (19%), Positives = 48/111 (43%), Gaps = 1/111 (0%)
Query: 122 KGSWKWVSNMFKDNEEKQDAENGKDLKLSTHILKIDVPIEQRHQHNGNIKTSPLRQDAKE 181
KG + + + D E++++ G + V +EQ+ + LR+ K
Sbjct: 18 KGKKQRLEEIVFDKEKRKEYLTGFHKRKVERRKHAQVQLEQQKREERLALRKSLREQRKR 77
Query: 182 KILESVDVSDKVSAS-EEGKDKNVNIDMDSKPNEMEIASPEENLYQPTAED 231
++ E + S ++++S E ++ + D SK + E +S E + +D
Sbjct: 78 ELAERLAFSKELNSSLENDEESSQQEDSSSKSDSEEESSMEPKTTEYDEDD 128
Score = 26.6 bits (56), Expect = 7.3
Identities = 17/68 (25%), Positives = 32/68 (47%), Gaps = 1/68 (1%)
Query: 169 NIKTSPLRQDAKEKILESVDVSDKVSASE-EGKDKNVNIDMDSKPNEMEIASPEENLYQP 227
N + S ++D+ K + S + +E + DK+V +++ ++ EIA P+E P
Sbjct: 95 NDEESSQQEDSSSKSDSEEESSMEPKTTEYDEDDKHVTVEIVEDDDDEEIAYPKEGFVTP 154
Query: 228 TAEDNTDV 235
DV
Sbjct: 155 RISPPPDV 162
>SPBC25B2.09c |||arginine-tRNA ligase|Schizosaccharomyces pombe|chr
2|||Manual
Length = 618
Score = 27.1 bits (57), Expect = 5.5
Identities = 17/59 (28%), Positives = 27/59 (45%)
Query: 188 DVSDKVSASEEGKDKNVNIDMDSKPNEMEIASPEENLYQPTAEDNTDVEDGSENSLWKW 246
DV KV+A +D+ + D ++ +P +L+ E +EDG E SL W
Sbjct: 220 DVYVKVNADATEEDEKIQKDKAEAESKGLPYTPPLSLHDKAREFFKRMEDGDEESLKVW 278
>SPBP4H10.06c |cut14|smc2, smc2|condensin subunit
Cut14|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1172
Score = 26.6 bits (56), Expect = 7.3
Identities = 16/77 (20%), Positives = 42/77 (54%), Gaps = 6/77 (7%)
Query: 148 KLSTHILKIDVPIEQRHQHNGNIKTSPLRQDAKEKILESVDVSDKVSASEEGKDKNVNID 207
KLS + ++ V Q+H H +++S Q +K+++L + +K+ E+ + + +++
Sbjct: 241 KLSLKVEELTVQASQKHSHIAEMESS--LQTSKQEVL---ILKEKIKKIEDERMRQMSVS 295
Query: 208 MDSKPNEMEIASPEENL 224
D + + ++ + EN+
Sbjct: 296 SD-RTLDSQLQTVNENI 311
>SPAC1486.05 |nup189||nucleoporin Nup189|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1778
Score = 26.6 bits (56), Expect = 7.3
Identities = 31/118 (26%), Positives = 50/118 (42%), Gaps = 23/118 (19%)
Query: 143 NGKDLKLSTHILKID--VPIEQRHQH---------NGNIKTSPLRQDAKEKILESVDVSD 191
+ K+ +L+ H LK+D P++ + N+ D +K+ E + + +
Sbjct: 988 DSKNKELNRHFLKVDDSAPLDDTFMSKKVKLDFSSDSNVSERGDYDDNAKKVDEVISI-E 1046
Query: 192 KVSASEEGKDKNVNIDMDSKPNEMEIASPEENLYQPTAE-------DNTDVEDGSENS 242
KV K+ NV + D N E S E++Y E DN D+ED SE S
Sbjct: 1047 KVDGYS--KENNVPLSEDDLSNSSE--SSNESVYSLVEESDASLAADNMDIEDISEES 1100
>SPAC23H4.08 |||RNA polymerase II associated protein
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 277
Score = 26.6 bits (56), Expect = 7.3
Identities = 15/62 (24%), Positives = 32/62 (51%), Gaps = 3/62 (4%)
Query: 183 ILESVDVSDKVSASEEGKDKNVNIDMDSKP---NEMEIASPEENLYQPTAEDNTDVEDGS 239
+++++ + D +S E + + +D D +E++ S E+ YQ + D + +D S
Sbjct: 201 VIDALSIPDAFRSSLEQELVSETVDSDKDDPLHDEIDEDSNAESFYQNSYPDEDEWQDSS 260
Query: 240 EN 241
EN
Sbjct: 261 EN 262
>SPBC1685.08 |||histone deacetylase complex subunit
Cti6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 424
Score = 26.6 bits (56), Expect = 7.3
Identities = 21/60 (35%), Positives = 28/60 (46%), Gaps = 3/60 (5%)
Query: 180 KEKILESVDVSDKVSASEEGKDKNVNIDMDSKPNEMEIASPEENLYQPTAEDNTDVEDGS 239
K+KI E D + + S+E KD+N S N E +PEE T E+ D E S
Sbjct: 205 KQKIEEEND--EILEDSKESKDENEENKETSTTNVAETDAPEEETVD-TVEEIADEEKHS 261
>SPAC1952.05 |gcn5||histone acetyltransferase
Gcn5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 454
Score = 26.2 bits (55), Expect = 9.6
Identities = 22/97 (22%), Positives = 43/97 (44%), Gaps = 5/97 (5%)
Query: 183 ILESVDVSDKVSASEEGKDKNVNIDMDSKPNEMEIASPEENLYQPTAEDNTDVEDGSENS 242
+++S + ++++ DK V D S PN E + + ++N D E S +
Sbjct: 16 VVDSTSSNFPNASNDSVHDKPVKQDEQSNPNVREAIANSDGQESLAVKENKDTESSSSHF 75
Query: 243 LWKWPSNKSCLAKITKIVTWPIHLVF-LFTIPDCEKP 278
+ SN +K K+V + + F + ++ EKP
Sbjct: 76 VPNGVSN----SKKRKLVATDLDVDFDISSVRVTEKP 108
>SPAC1A6.04c |plb1||phospholipase B homolog Plb1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 613
Score = 26.2 bits (55), Expect = 9.6
Identities = 25/118 (21%), Positives = 44/118 (37%), Gaps = 7/118 (5%)
Query: 150 STHILKIDVPIEQRHQHNGNIKTSPLRQDAKEKILESVDVSDKVSASEEGK-DKNVNIDM 208
ST+ KI NG I L+ + E + + + + E D N+
Sbjct: 337 STYFNKIMRNFNDSSTKNGRIIQQYLKGNFSENGQQIISIPNPFQGVESANSDAANNLGS 396
Query: 209 DSKPNEMEIASPEENL-YQPTAEDNTDVE-----DGSENSLWKWPSNKSCLAKITKIV 260
S N ++ E + P + DV+ D ++S W WP+ S + ++V
Sbjct: 397 SSSLNLVDTFLTGEKIPLWPLLQKGRDVDVIVAVDNGDDSEWLWPNGNSLVQTYERVV 454
>SPAC1142.08 |fhl1|SPAC8C9.01|fork head transcription factor Fhl1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 743
Score = 26.2 bits (55), Expect = 9.6
Identities = 16/64 (25%), Positives = 29/64 (45%), Gaps = 1/64 (1%)
Query: 188 DVSDKVSASEEGKDKNVNIDMDSKPNEMEIASPEENLYQPTAEDNTDVEDGSENSLWKWP 247
D ++V +G+ N +I S ++ +I E + A++ +V+D S P
Sbjct: 663 DTLERVETGNQGQRMN-SIGNASSFSKRDIMENENGSFDTNAKNGNNVDDSSSVRGMNLP 721
Query: 248 SNKS 251
SN S
Sbjct: 722 SNSS 725
>SPBC1773.07c |sbp1|yrb1|Ran GTPase binding protein
Sbp1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 215
Score = 26.2 bits (55), Expect = 9.6
Identities = 11/20 (55%), Positives = 14/20 (70%)
Query: 129 SNMFKDNEEKQDAENGKDLK 148
+N+FK+N EK EN K LK
Sbjct: 194 ANLFKENFEKYQEENAKILK 213
>SPCC553.08c |||GTPase Ria1 |Schizosaccharomyces pombe|chr
3|||Manual
Length = 1000
Score = 26.2 bits (55), Expect = 9.6
Identities = 17/69 (24%), Positives = 34/69 (49%), Gaps = 3/69 (4%)
Query: 170 IKTSPLRQDAKEKILESVDVSDKVSASEEGKDKNVNIDMDSKPNEMEIASPE---ENLYQ 226
I +PL + +L+ + VS++ K++NV + + E+ +PE E L +
Sbjct: 673 ITVTPLSGSVVDFLLKHSKTIENVSSNFSKKNRNVVVSESLTKSMEEVLTPEKFYERLSK 732
Query: 227 PTAEDNTDV 235
E+N+D+
Sbjct: 733 LLEEENSDL 741
>SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1957
Score = 26.2 bits (55), Expect = 9.6
Identities = 25/112 (22%), Positives = 55/112 (49%), Gaps = 9/112 (8%)
Query: 118 QNFAKGSWKWVSNMFKDNEEKQDAEN-GKDLKLSTHILK----IDVPIEQRHQHNGNIKT 172
+ A+ S + N N+ K ++ ++++L +LK + + +E+ + ++
Sbjct: 1376 KEIAELSSRLEDNQLATNKLKNQLDHLNQEIRLKEDVLKEKESLIISLEESLSNQRQKES 1435
Query: 173 SPLRQDAKEKILESVDVSDKVSASEEGKDKNVNIDMDSKPNEMEIASPEENL 224
S L DAK ++ +D + + ++S K +++N +D K E+AS E L
Sbjct: 1436 SLL--DAKNELEHMLDDTSRKNSSLMEKIESINSSLDDK--SFELASAVEKL 1483
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.322 0.138 0.435
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,029,855
Number of Sequences: 5004
Number of extensions: 88166
Number of successful extensions: 310
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 21
Number of HSP's that attempted gapping in prelim test: 289
Number of HSP's gapped (non-prelim): 40
length of query: 459
length of database: 2,362,478
effective HSP length: 75
effective length of query: 384
effective length of database: 1,987,178
effective search space: 763076352
effective search space used: 763076352
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 55 (26.2 bits)
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