Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000538-TA|BGIBMGA000538-PA|IPR004481|K+-dependent
Na+/Ca+ exchanger related-protein, IPR004836|Sodium/calcium exchanger
protein, IPR004837|Sodium/calcium exchanger membrane region
(459 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11_01_0292 - 2200714-2201478,2202691-2203395 48 2e-05
11_06_0626 - 25620409-25620706,25620814-25620943,25621034-256212... 44 2e-04
03_01_0564 - 4176177-4178096 42 0.001
03_05_0545 + 25419031-25420758 40 0.004
02_05_0116 - 25976234-25976394,25976485-25976701,25977345-259774... 40 0.004
10_08_0133 + 15100049-15101836,15103344-15103382 36 0.051
05_04_0194 + 18949268-18951514,18952063-18952215,18952304-18954241 36 0.090
01_01_0251 + 2058443-2058565,2058870-2059087,2060436-2060498,206... 33 0.48
12_02_1175 + 26702744-26704507 32 0.83
03_01_0371 + 2883418-2883967,2884097-2884176,2886283-2886339,288... 32 0.83
08_01_0609 + 5345761-5345862,5346808-5346871,5346958-5350191,535... 32 1.1
04_04_1188 + 31579833-31579914,31580001-31580176,31580822-315809... 31 1.5
03_02_0943 + 12598616-12598789,12599790-12601250 31 1.9
01_07_0105 - 41104655-41104851,41105818-41107150 31 2.5
06_01_0926 - 7139220-7139318,7139394-7139478,7139573-7139643,713... 30 3.4
05_03_0098 + 8375038-8375063,8375351-8377049,8377159-8377737 30 3.4
09_04_0086 + 14445665-14446683,14448669-14448915 30 4.5
07_01_0043 + 343777-343953,345198-346716,346831-346977,347378-34... 30 4.5
01_06_0958 - 33357689-33357997,33358135-33358284,33358371-333585... 30 4.5
08_01_0998 - 10136050-10138356 29 5.9
07_03_1772 + 29411874-29413218,29413355-29413421,29413749-294138... 29 5.9
02_05_0960 + 33097510-33097821,33098846-33099043,33099174-330994... 29 5.9
01_01_0850 - 6641980-6642163,6642791-6644091 29 5.9
06_01_0617 - 4483517-4483978,4484093-4484490,4484814-4484898,448... 29 7.8
>11_01_0292 - 2200714-2201478,2202691-2203395
Length = 489
Score = 48.0 bits (109), Expect = 2e-05
Identities = 31/154 (20%), Positives = 71/154 (46%), Gaps = 3/154 (1%)
Query: 286 LTFIMCIVWIGSLSYIVAWMITIIGDTLMIPDSVMGITFLAAGTSVPEAVSSVIVAKQXX 345
++F+M + WI +++ + + IG + P +++G+T LA G SV + V+ V +AK
Sbjct: 334 ISFVMSVFWISTMAGELLNCLAAIGVIMDFPPAILGMTVLAWGNSVGDLVADVALAKSGQ 393
Query: 346 XXXXXXXXXXXXTFDILLCLGLPWLIKASLTPAEPGHYWVKINSMGLEYSAIXXXXXXXX 405
F++L+ LG +I+ + P Y ++ + +G+ + +
Sbjct: 394 PTIAIAGCFAGPMFNMLVGLGTALVIQTA--RVYPKAYVLEFH-VGIVVAFVFLLLSLMG 450
Query: 406 XXXXFWFNKFKLDAAVGRACLAMYAMFLILATLI 439
+ +F++ G + +Y +F +++ I
Sbjct: 451 TLLMVTWTRFRVPRFWGYCLMGLYILFTVVSIAI 484
>11_06_0626 -
25620409-25620706,25620814-25620943,25621034-25621250,
25621894-25622015,25622119-25622267,25622642-25622759,
25622840-25623185
Length = 459
Score = 44.4 bits (100), Expect = 2e-04
Identities = 44/189 (23%), Positives = 80/189 (42%), Gaps = 9/189 (4%)
Query: 187 VDVSDKVSASEEGKDKNVNIDMDSKPNEMEIASPEENLYQPTAEDNTDVEDGSENSLWKW 246
VD+ S S EG D++ + + + E+ + + V+ + S
Sbjct: 193 VDIFSAHSYSNEGYHHVSEEDVEESSTGLTLKNKWEDTHWFSIWWQQFVDAATLESSVSR 252
Query: 247 PSNKSCLAKIT---KIVTWPIHLVFLFTIPDCEKPRFKNWFPLTFIMCIVWIGSLSYIVA 303
+ +CL I ++ P ++F F +P E W + FI +++I ++Y V
Sbjct: 253 KMDSTCLRVIGISWNLIIAPWKMLFAF-VPPYEIAH--GW--IAFICSLIFISGIAYGVT 307
Query: 304 WMITIIGDTLMIPDSVMGITFLAAGTSVPEAVSSVIVA-KQXXXXXXXXXXXXXXTFDIL 362
+ I + V+ T LAAGTS P+ V+S I A +Q + +I
Sbjct: 308 KITDQISCVTGVSPYVIAFTALAAGTSWPDLVASKIAAERQITADSAITNITCSNSVNIY 367
Query: 363 LCLGLPWLI 371
+ +G+PWL+
Sbjct: 368 VGIGVPWLV 376
Score = 31.9 bits (69), Expect = 1.1
Identities = 12/26 (46%), Positives = 18/26 (69%)
Query: 29 ITEGDIGVGTIVGSAVFNILAVAACC 54
+T G +G GT+VGSA F++ + A C
Sbjct: 112 LTAGGLGPGTLVGSAAFDLFPIHAVC 137
>03_01_0564 - 4176177-4178096
Length = 639
Score = 41.9 bits (94), Expect = 0.001
Identities = 26/79 (32%), Positives = 44/79 (55%), Gaps = 5/79 (6%)
Query: 266 LVFLFTIPDCEKPRFKNWFPLT---FIMCIVWIGSLSYIVAWMITIIGDTLMIPDSVMGI 322
L F+FT D E+P + FP F+M I+W ++ + ++ G L I S++G+
Sbjct: 455 LAFMFT--DHERPPRRFLFPWVLGGFVMSIIWFYIIANELVALLVAFGVILGINPSILGL 512
Query: 323 TFLAAGTSVPEAVSSVIVA 341
T LA G S+ + +S+V +A
Sbjct: 513 TVLAWGNSMGDLMSNVALA 531
Score = 36.3 bits (80), Expect = 0.051
Identities = 28/107 (26%), Positives = 53/107 (49%), Gaps = 2/107 (1%)
Query: 18 PELFVNVIGTFIT-EGDIGVGTIVGSAVF-NILAVAACCGIGAGMVVPLDWWPLTRDCLA 75
P++F ++ T GD+G+ +++G AVF + V A A V +D RD
Sbjct: 183 PDVFASIAAFMGTGAGDVGLNSVLGGAVFVTCVVVGAVSLCVAEKNVQIDRRCFVRDVGF 242
Query: 76 YGITVSILICIIHDEYVQWYEAFLLVSLYGVYICIMYYDKPIQNFAK 122
+ +T+ L I+ V + A + VS+Y VY ++ ++ ++ A+
Sbjct: 243 FLMTLVALSIILIVGKVTVWGAIMFVSIYVVYAFVVAANEVLRKHAR 289
>03_05_0545 + 25419031-25420758
Length = 575
Score = 39.9 bits (89), Expect = 0.004
Identities = 19/59 (32%), Positives = 35/59 (59%)
Query: 283 WFPLTFIMCIVWIGSLSYIVAWMITIIGDTLMIPDSVMGITFLAAGTSVPEAVSSVIVA 341
W F+M ++W +L+ + ++ IG + + SV+G+T LA G S+ + VS+V +A
Sbjct: 407 WLAAGFLMSVLWAYTLARELVALLVAIGYMVGVRASVLGVTVLAWGDSLGDLVSNVAMA 465
>02_05_0116 -
25976234-25976394,25976485-25976701,25977345-25977466,
25977570-25977718,25978095-25978212,25978293-25978638
Length = 370
Score = 39.9 bits (89), Expect = 0.004
Identities = 40/160 (25%), Positives = 71/160 (44%), Gaps = 8/160 (5%)
Query: 187 VDVSDKVSASEEGKDKNVNIDMDSKPNEMEIASPEENLYQPTAEDNTDVEDGSENSLWKW 246
VD+ S S EG D++ P + + + E+ + + V+ + S
Sbjct: 193 VDIFSARSYSNEGYHHVSEKDVEESPTGLTLKNKWEDTHWFSIWWQQFVDAATLESSVSR 252
Query: 247 PSNKSCLAKIT---KIVTWPIHLVFLFTIPDCEKPRFKNWFPLTFIMCIVWIGSLSYIVA 303
+ +CL+ I ++ P ++F F IP E W + FI +++I ++Y V
Sbjct: 253 KMDSTCLSVIGISWNLIIAPWKMLFAF-IPPYEIAH--GW--IAFICSLIFISGIAYGVT 307
Query: 304 WMITIIGDTLMIPDSVMGITFLAAGTSVPEAVSSVIVAKQ 343
+ I + V+ T LAAGTS P+ V+S I A++
Sbjct: 308 KITDQISCVTGVSPYVIAFTALAAGTSWPDLVASKIAAER 347
Score = 31.9 bits (69), Expect = 1.1
Identities = 12/26 (46%), Positives = 18/26 (69%)
Query: 29 ITEGDIGVGTIVGSAVFNILAVAACC 54
+T G +G GT+VGSA F++ + A C
Sbjct: 112 LTAGGLGPGTLVGSAAFDLFPIHAVC 137
>10_08_0133 + 15100049-15101836,15103344-15103382
Length = 608
Score = 36.3 bits (80), Expect = 0.051
Identities = 24/120 (20%), Positives = 50/120 (41%), Gaps = 5/120 (4%)
Query: 266 LVFLFTIPDCEKP-RFKNWFPLTFIMCIVWIGSLSYIVAWMITIIGDTLMIPDSVMGITF 324
+ F T PD W F+M + W +++ + ++ + + + +G+T
Sbjct: 417 VAFFTTSPDAPPADHLAAWLAAGFVMSVAWAYAVATELLALLVSAAHVMGVDSAALGLTV 476
Query: 325 LAAGTSVPEAVSSVIVAKQXXXXXXXXXXXX----XXTFDILLCLGLPWLIKASLTPAEP 380
LA G S+ + V+++ VA + FD+L+ LG+ L+ + + P
Sbjct: 477 LAWGNSLGDLVANLAVASRGGGGGGAQVAVAGCYGGPVFDVLVGLGVSMLLSSWASHPRP 536
>05_04_0194 + 18949268-18951514,18952063-18952215,18952304-18954241
Length = 1445
Score = 35.5 bits (78), Expect = 0.090
Identities = 20/65 (30%), Positives = 36/65 (55%), Gaps = 2/65 (3%)
Query: 178 DAKEKILESVDVSDKVSASEEGKDKNVN-IDMDSKPNEMEIASPEENLYQPTAEDNTDVE 236
D +++LE V D + A G D + N +D +++ +EME A + N+ AED + +
Sbjct: 285 DYDDEMLEEKLVGDVIRAYSNGADLDTNGVDWEAE-DEMEFADLDTNVVDWEAEDEMEFD 343
Query: 237 DGSEN 241
D ++N
Sbjct: 344 DDNDN 348
>01_01_0251 +
2058443-2058565,2058870-2059087,2060436-2060498,
2060499-2060590,2060697-2060938
Length = 245
Score = 33.1 bits (72), Expect = 0.48
Identities = 20/59 (33%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Query: 65 DWWPLTRDCLAYGITVSILICIIHDEYVQWYEAFL-LVSLYGVYICIMYYDKPIQNFAK 122
D W R+ AYGI V I++ D VQ+Y +L + LYG Y+ + N++K
Sbjct: 63 DLWDGFRESSAYGIAVPIVLNGCSDGVVQYYVPYLSAIQLYGRLRRHFYHSRVQTNWSK 121
>12_02_1175 + 26702744-26704507
Length = 587
Score = 32.3 bits (70), Expect = 0.83
Identities = 17/59 (28%), Positives = 30/59 (50%)
Query: 283 WFPLTFIMCIVWIGSLSYIVAWMITIIGDTLMIPDSVMGITFLAAGTSVPEAVSSVIVA 341
W F+M ++W L+ + ++ IG + V+G T LA G S+ + V+ V +A
Sbjct: 421 WLAGGFLMSVLWSYVLARELVALLVSIGVAAGVEAGVLGATVLAWGNSLGDLVADVALA 479
Score = 31.1 bits (67), Expect = 1.9
Identities = 21/86 (24%), Positives = 39/86 (45%), Gaps = 5/86 (5%)
Query: 32 GDIGVGTIVGSAVFNILAVAACCGI-----GAGMVVPLDWWPLTRDCLAYGITVSILICI 86
GD+G+ ++G A+F VA I G G V ++ RD + + L+ +
Sbjct: 190 GDVGLSGVLGGALFVSTVVAGVVAIVAGRRGGGEPVIIERRGFVRDVCFLLVALCYLLAV 249
Query: 87 IHDEYVQWYEAFLLVSLYGVYICIMY 112
+ V + A +SLY Y+ +++
Sbjct: 250 LLTGAVTVWSAASFLSLYAGYVLLVW 275
Score = 29.5 bits (63), Expect = 5.9
Identities = 10/27 (37%), Positives = 18/27 (66%)
Query: 313 LMIPDSVMGITFLAAGTSVPEAVSSVI 339
L +P ++ G+T L+ G P+ +SSV+
Sbjct: 144 LRLPPAIAGVTLLSLGNGAPDVLSSVV 170
>03_01_0371 +
2883418-2883967,2884097-2884176,2886283-2886339,
2887152-2887207,2888006-2888079,2889511-2889798,
2890043-2890120,2890359-2890882,2891315-2891438,
2891619-2891767,2891983-2892137,2892477-2892682,
2892768-2892901,2892983-2893284,2893514-2893617,
2893858-2893928
Length = 983
Score = 32.3 bits (70), Expect = 0.83
Identities = 21/101 (20%), Positives = 44/101 (43%), Gaps = 2/101 (1%)
Query: 138 KQDAENGKDLKLSTHILKIDVPIEQRHQHNGNIKTSPLRQDAKEKILESVDVSDKVSASE 197
K+ +N DL + +D P + N+K E ++SV+++ ++S
Sbjct: 369 KELPDNWNDLSDMLQLQPLDRPFLFPENGDSNVKNGENGSQVVEDDMQSVELNSEMSPMT 428
Query: 198 EGKDKNVNIDMDSKPNEMEIASPEE--NLYQPTAEDNTDVE 236
+ +NV +D + P++ + E N P+ +D + E
Sbjct: 429 QDDMQNVELDNEMSPSKQDDMQNVELNNEISPSKQDILETE 469
>08_01_0609 +
5345761-5345862,5346808-5346871,5346958-5350191,
5350375-5350589,5351123-5351393,5351986-5352161,
5352287-5352394,5352821-5352930,5354291-5354393,
5354658-5354828,5354952-5355080,5355322-5355504,
5355612-5355701,5355823-5355934,5356100-5356227,
5357769-5357825,5357872-5357923,5358318-5358393,
5358860-5358950,5359046-5359224,5359563-5359681,
5359783-5359880
Length = 1955
Score = 31.9 bits (69), Expect = 1.1
Identities = 22/90 (24%), Positives = 41/90 (45%), Gaps = 3/90 (3%)
Query: 155 KIDVPIEQRHQHNGNIKTSPLRQDAK--EKILESVDVSDKVSASEEGKDKNVNIDMDSKP 212
K +V + +N I+ + +AK E LE VD+S ++S + +D
Sbjct: 261 KFEVDLSALASNNSMIEAVNVMDEAKAIEDTLE-VDLSGNATSSSTYGEVKFEVDSLGNT 319
Query: 213 NEMEIASPEENLYQPTAEDNTDVEDGSENS 242
+ + P + Y+P +++ T D SEN+
Sbjct: 320 SSTVMYGPADGAYEPRSDEVTFKVDSSENA 349
>04_04_1188 +
31579833-31579914,31580001-31580176,31580822-31580923,
31581015-31581245,31581821-31581922,31582092-31582184,
31582275-31582379,31582455-31582514,31582621-31582698,
31582778-31582924,31583011-31583109,31583178-31583267,
31583360-31583451,31583529-31583646,31583783-31583871,
31583998-31584088,31584203-31584294,31584442-31584749,
31584866-31584897
Length = 728
Score = 31.5 bits (68), Expect = 1.5
Identities = 21/104 (20%), Positives = 47/104 (45%)
Query: 133 KDNEEKQDAENGKDLKLSTHILKIDVPIEQRHQHNGNIKTSPLRQDAKEKILESVDVSDK 192
KD ++ Q + +D + D P +++ + + T+ A +K + S D SD+
Sbjct: 311 KDTKKGQSKDESEDSSDESSEESGDEPPQKKIKDSTTSGTTKPSPKATKKEISSDDESDE 370
Query: 193 VSASEEGKDKNVNIDMDSKPNEMEIASPEENLYQPTAEDNTDVE 236
+S+E D++V + E + ++E+++D+E
Sbjct: 371 DDSSDESSDEDVKQKQTQAKKVQAPVAQESSSSDESSEEDSDME 414
>03_02_0943 + 12598616-12598789,12599790-12601250
Length = 544
Score = 31.1 bits (67), Expect = 1.9
Identities = 29/75 (38%), Positives = 43/75 (57%), Gaps = 12/75 (16%)
Query: 136 EEKQDAENGKDLKLSTHILKIDVPIEQRHQHNGNIKTSPLRQDAKEKILESVDVSD-KVS 194
+EK+ + K+L+ ST KI ++QR Q N +TSP ++S D S+ ++
Sbjct: 84 KEKETLDVLKELE-STK--KIIADLKQRIQKESN-ETSP-------SAVKSDDQSEIPIT 132
Query: 195 ASEEGKDKNVNIDMD 209
SEE K +NVNIDMD
Sbjct: 133 ESEEQKPENVNIDMD 147
>01_07_0105 - 41104655-41104851,41105818-41107150
Length = 509
Score = 30.7 bits (66), Expect = 2.5
Identities = 32/117 (27%), Positives = 49/117 (41%), Gaps = 9/117 (7%)
Query: 133 KDNEEKQDAENGKDLKLSTHILKIDVPIEQRHQH------NGNIKTSPLRQDAKEKIL-- 184
K E K E D K ++ V I+++ + +K DAK +
Sbjct: 134 KKEEAKNKQEAVTDDKKKEKVIPTKVAIDEKKEDVVVPMKEEFVKEKEKITDAKNDVAST 193
Query: 185 ESVDVSDKVSASEEGKDKNVNIDMDSKPNEMEIASPEENLYQPT-AEDNTDVEDGSE 240
E+V D+ +EE K+KN N D ME A EE+ + AED+ D +D +
Sbjct: 194 ENVAAVDEKIKAEEDKNKNKNDDEVVATATMEAAVEEEDDDEAALAEDDDDDDDDEQ 250
>06_01_0926 -
7139220-7139318,7139394-7139478,7139573-7139643,
7139996-7140076,7140805-7140895,7141242-7141330,
7141749-7141802,7141906-7142085,7142175-7142237,
7142575-7142705,7142807-7142900,7143343-7143684,
7143957-7144348,7145010-7148487,7149101-7149187,
7149324-7149367,7149495-7149591,7150429-7150572
Length = 1873
Score = 30.3 bits (65), Expect = 3.4
Identities = 20/88 (22%), Positives = 42/88 (47%), Gaps = 8/88 (9%)
Query: 162 QRHQHNGNIKTSPLRQDAKEKILESVDVSDKVSASEEGKDK----NVNIDMDSKPNEMEI 217
++ + P ++DA EK+ ++ + S++ SEE +K N + +K +++ +
Sbjct: 746 EKLSQTATLTEKPSKEDAAEKLPQTNEPSEQPHESEETAEKPLQNEANAESTTKQSDLSL 805
Query: 218 ASP---EENLYQPTAEDNTDVEDGSENS 242
P + N+ PT E +D G +S
Sbjct: 806 EKPPQVDANVGNPT-EPESDATSGVNSS 832
>05_03_0098 + 8375038-8375063,8375351-8377049,8377159-8377737
Length = 767
Score = 30.3 bits (65), Expect = 3.4
Identities = 29/126 (23%), Positives = 56/126 (44%), Gaps = 6/126 (4%)
Query: 88 HDEYVQWYEAFLLVSLYGVYICIMYYDKPIQNFAKGSWKWVSNMFKDNEEKQDAEN-GKD 146
H + ++ +AF++ + + ++ + IQN K +W +D E ++ A D
Sbjct: 199 HLDGLRMLDAFVVNKRPSIRLELLSSSESIQNLIK-MLQWTDPALEDQEMRERAARIVAD 257
Query: 147 LKLST-HILKIDVPIEQRHQHNGNIKTSPLRQDAKEKILESVDVSDKVSASEEGKDKNVN 205
+ HI++I ++ + ++ SPLRQ +E EE KDKN+N
Sbjct: 258 VATGALHIVQIPGALQCI---SSLLQVSPLRQYCQEVEKGPQKQDQDKEGGEEEKDKNMN 314
Query: 206 IDMDSK 211
+D +
Sbjct: 315 TAIDEQ 320
>09_04_0086 + 14445665-14446683,14448669-14448915
Length = 421
Score = 29.9 bits (64), Expect = 4.5
Identities = 21/93 (22%), Positives = 37/93 (39%), Gaps = 1/93 (1%)
Query: 137 EKQDAENGKDLKLSTHILKIDVPI-EQRHQHNGNIKTSPLRQDAKEKILESVDVSDKVSA 195
+ Q + D I++I + E + ++N NI+T + D + + D S
Sbjct: 301 QAQRSMKHSDYNFCNKIVQIPLSYGEDKPRNNNNIRTKKRKMDLSRSLFRRIASRDDKSL 360
Query: 196 SEEGKDKNVNIDMDSKPNEMEIASPEENLYQPT 228
S K K N D+D + E+ E + T
Sbjct: 361 SCIDKQKGKNEDIDELEDIAEVDKQLERYQRDT 393
>07_01_0043 +
343777-343953,345198-346716,346831-346977,347378-347940
Length = 801
Score = 29.9 bits (64), Expect = 4.5
Identities = 20/69 (28%), Positives = 35/69 (50%), Gaps = 4/69 (5%)
Query: 178 DAKE-KILESVDVSDKVSASEEGKDKNVNIDMDS---KPNEMEIASPEENLYQPTAEDNT 233
DA + K+ +S D+S+++ + G + N D+D P I E+ + Q +D T
Sbjct: 424 DASDLKLCDSKDISEELKHNRTGINDNQYFDVDPDELSPRTFSIKRIEDWINQIDIDDGT 483
Query: 234 DVEDGSENS 242
VE+ E+S
Sbjct: 484 LVEEQGESS 492
>01_06_0958 -
33357689-33357997,33358135-33358284,33358371-33358511,
33359807-33360592
Length = 461
Score = 29.9 bits (64), Expect = 4.5
Identities = 15/56 (26%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
Query: 39 IVGSAVFNILAVAACCGIG--AGMVVPLDWWPLTRDCLAYGITVSILICIIHDEYV 92
+ G A N+L C G G A V+ D L + CL G+++ ++ ++ E++
Sbjct: 112 VTGGAASNVLYNLLCTGCGRRAAAVIDYDIALLFQPCLLLGVSIGVVCNVMFPEWL 167
>08_01_0998 - 10136050-10138356
Length = 768
Score = 29.5 bits (63), Expect = 5.9
Identities = 12/39 (30%), Positives = 18/39 (46%)
Query: 224 LYQPTAEDNTDVEDGSENSLWKWPSNKSCLAKITKIVTW 262
L P +T ++ G SL +W S S A + + TW
Sbjct: 25 LSTPPCSSSTIIQHGEAESLLRWKSTLSAAASASPLTTW 63
>07_03_1772 + 29411874-29413218,29413355-29413421,29413749-29413896,
29415293-29415416,29416340-29416590,29416923-29418449,
29418786-29418896,29419576-29419734,29419827-29421734
Length = 1879
Score = 29.5 bits (63), Expect = 5.9
Identities = 16/50 (32%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
Query: 196 SEEGKDKNVNIDMDSKPNEMEIASPEENLYQPTAEDNTDVEDGSENSLWK 245
SE +D N D + N ++ + EE+ P + DN +VE+ LWK
Sbjct: 1090 SEMERDSMFNFDANMM-NYVQHSYREEDFTWPPSADNQEVEEDELEELWK 1138
>02_05_0960 +
33097510-33097821,33098846-33099043,33099174-33099446,
33099575-33099677,33100297-33100415,33100968-33101759
Length = 598
Score = 29.5 bits (63), Expect = 5.9
Identities = 21/79 (26%), Positives = 41/79 (51%), Gaps = 5/79 (6%)
Query: 170 IKTSPLRQDAKEKILESVDVSDKVSASEEGKDKNVN--IDM---DSKPNEMEIASPEENL 224
+KT ++ + E++ S +VSD V +E D + ID + + ++E+ EN
Sbjct: 402 VKTETMQFASSEEVQSSSEVSDAVGMMDEKVDSDGEDIIDHHVDEDRMTDVELWQQLENE 461
Query: 225 YQPTAEDNTDVEDGSENSL 243
+ED+ VED +E+++
Sbjct: 462 LYRRSEDDEIVEDMTESAI 480
>01_01_0850 - 6641980-6642163,6642791-6644091
Length = 494
Score = 29.5 bits (63), Expect = 5.9
Identities = 22/97 (22%), Positives = 43/97 (44%), Gaps = 6/97 (6%)
Query: 171 KTSPLRQDAKEKILESVDVSD-KVSASEEGKDKNVNI----DMDSKPNEMEIASPEENLY 225
K P R + ++L V+ D + SAS+ +D +++ D D N A PEE+
Sbjct: 286 KGQPKRAQSARRVLNFVEPKDCEESASDSDEDDDLDDFIINDSDCSENSANSAEPEESDA 345
Query: 226 QPTAEDNTDVEDGSENSLWKWPSNKSCLAKITKIVTW 262
+E ++ + S+N + + +C+ + W
Sbjct: 346 SAPSEGSSSELEESDNEI-DYKDVMACIGRKRNAKEW 381
>06_01_0617 -
4483517-4483978,4484093-4484490,4484814-4484898,
4485002-4485838
Length = 593
Score = 29.1 bits (62), Expect = 7.8
Identities = 20/70 (28%), Positives = 38/70 (54%), Gaps = 8/70 (11%)
Query: 167 NGNIKTSPLRQDAKEKILESVDVSDKVSASEEGKDKNVNIDMDSKPNEMEIASPEENLYQ 226
NG+ +++P + D +E +LE+ D +D SA D+N + D +P++M+ S N +
Sbjct: 528 NGDEESNPQQNDTEEPLLEARD-NDSRSA-----DQNGSFAADQEPSQMQ--SGTSNGHV 579
Query: 227 PTAEDNTDVE 236
P + +E
Sbjct: 580 PAQAQHIQIE 589
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.322 0.138 0.435
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,541,632
Number of Sequences: 37544
Number of extensions: 520163
Number of successful extensions: 1392
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 14
Number of HSP's that attempted gapping in prelim test: 1367
Number of HSP's gapped (non-prelim): 37
length of query: 459
length of database: 14,793,348
effective HSP length: 84
effective length of query: 375
effective length of database: 11,639,652
effective search space: 4364869500
effective search space used: 4364869500
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 62 (29.1 bits)
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