Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000538-TA|BGIBMGA000538-PA|IPR004481|K+-dependent
Na+/Ca+ exchanger related-protein, IPR004836|Sodium/calcium exchanger
protein, IPR004837|Sodium/calcium exchanger membrane region
(459 letters)
Database: bee
429 sequences; 140,377 total letters
Searching.....................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF117814-1|ABO38437.1| 570|Apis mellifera cryptochrome 2 protein. 26 0.57
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 25 1.3
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 25 1.3
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 25 1.3
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 25 1.3
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 25 1.3
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 25 1.3
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 25 1.3
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 25 1.3
AY601637-1|AAT11850.1| 683|Apis mellifera hexamerin 70b protein. 25 1.8
DQ342041-1|ABC69933.1| 828|Apis mellifera STIP protein. 24 3.1
DQ071552-1|AAY82248.1| 495|Apis mellifera anarchy 1 protein. 24 3.1
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 24 3.1
AF144379-1|AAD34586.1| 543|Apis mellifera glutamate transporter... 24 3.1
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr... 23 5.4
>EF117814-1|ABO38437.1| 570|Apis mellifera cryptochrome 2 protein.
Length = 570
Score = 26.2 bits (55), Expect = 0.57
Identities = 12/38 (31%), Positives = 20/38 (52%)
Query: 23 NVIGTFITEGDIGVGTIVGSAVFNILAVAACCGIGAGM 60
+ + F+T GD+ + G VF+ L + A + AGM
Sbjct: 376 HAVACFLTRGDLWISWEEGMKVFDELLLDADWSVNAGM 413
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 25.0 bits (52), Expect = 1.3
Identities = 9/21 (42%), Positives = 15/21 (71%)
Query: 421 VGRACLAMYAMFLILATLIEL 441
V R CL ++ +F +LAT++ L
Sbjct: 432 VDRLCLIVFTLFTVLATIVIL 452
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 25.0 bits (52), Expect = 1.3
Identities = 9/21 (42%), Positives = 15/21 (71%)
Query: 421 VGRACLAMYAMFLILATLIEL 441
V R CL ++ +F +LAT++ L
Sbjct: 432 VDRLCLIVFTLFTVLATIVIL 452
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 25.0 bits (52), Expect = 1.3
Identities = 9/21 (42%), Positives = 15/21 (71%)
Query: 421 VGRACLAMYAMFLILATLIEL 441
V R CL ++ +F +LAT++ L
Sbjct: 432 VDRLCLIVFTLFTVLATIVIL 452
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 25.0 bits (52), Expect = 1.3
Identities = 9/21 (42%), Positives = 15/21 (71%)
Query: 421 VGRACLAMYAMFLILATLIEL 441
V R CL ++ +F +LAT++ L
Sbjct: 432 VDRLCLIVFTLFTVLATIVIL 452
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 25.0 bits (52), Expect = 1.3
Identities = 9/21 (42%), Positives = 15/21 (71%)
Query: 421 VGRACLAMYAMFLILATLIEL 441
V R CL ++ +F +LAT++ L
Sbjct: 432 VDRLCLIVFTLFTVLATIVIL 452
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 25.0 bits (52), Expect = 1.3
Identities = 9/21 (42%), Positives = 15/21 (71%)
Query: 421 VGRACLAMYAMFLILATLIEL 441
V R CL ++ +F +LAT++ L
Sbjct: 432 VDRLCLIVFTLFTVLATIVIL 452
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 25.0 bits (52), Expect = 1.3
Identities = 9/21 (42%), Positives = 15/21 (71%)
Query: 421 VGRACLAMYAMFLILATLIEL 441
V R CL ++ +F +LAT++ L
Sbjct: 500 VDRLCLIVFTLFTVLATIVIL 520
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 25.0 bits (52), Expect = 1.3
Identities = 9/21 (42%), Positives = 15/21 (71%)
Query: 421 VGRACLAMYAMFLILATLIEL 441
V R CL ++ +F +LAT++ L
Sbjct: 500 VDRLCLIVFTLFTVLATIVIL 520
>AY601637-1|AAT11850.1| 683|Apis mellifera hexamerin 70b protein.
Length = 683
Score = 24.6 bits (51), Expect = 1.8
Identities = 14/56 (25%), Positives = 30/56 (53%), Gaps = 2/56 (3%)
Query: 151 THILKIDVPIEQRHQHNGNIKTSPLRQ--DAKEKILESVDVSDKVSASEEGKDKNV 204
+++++ID P+ RH ++G PL + D +L ++ V + + E ++ NV
Sbjct: 626 SNVVQIDSPVWGRHIYDGRAMGFPLDKPVDPLLLVLSNIHVKEVLVHHREMEELNV 681
>DQ342041-1|ABC69933.1| 828|Apis mellifera STIP protein.
Length = 828
Score = 23.8 bits (49), Expect = 3.1
Identities = 17/48 (35%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Query: 165 QHNGNIKTSPLRQDAKEKILESVDVSDKVSASE-EGKDKNVNIDMDSK 211
QHN NI QD + + +SD+V A E E K+ + ID S+
Sbjct: 320 QHNLNILVDMCEQDIIQNDRRTRHLSDRVVALEAEKKNLSKVIDQHSQ 367
>DQ071552-1|AAY82248.1| 495|Apis mellifera anarchy 1 protein.
Length = 495
Score = 23.8 bits (49), Expect = 3.1
Identities = 9/31 (29%), Positives = 15/31 (48%)
Query: 92 VQWYEAFLLVSLYGVYICIMYYDKPIQNFAK 122
+ W FL V L+GV + + D + +K
Sbjct: 1 MSWQRVFLAVGLFGVLLLLTNADNSVHILSK 31
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 23.8 bits (49), Expect = 3.1
Identities = 12/30 (40%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
Query: 413 NKFKLDAAV-GRACLAMYAMFLILATLIEL 441
N +K A V R CL ++ +F I+AT+ L
Sbjct: 517 NDWKFAAMVIDRMCLIIFTLFTIIATIAVL 546
>AF144379-1|AAD34586.1| 543|Apis mellifera glutamate transporter
Am-EAAT protein.
Length = 543
Score = 23.8 bits (49), Expect = 3.1
Identities = 8/28 (28%), Positives = 17/28 (60%)
Query: 206 IDMDSKPNEMEIASPEENLYQPTAEDNT 233
+D + K ++E+ +P EN+ + +D T
Sbjct: 503 MDKEKKLEDLEMGTPLENILESCQQDET 530
>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
protein.
Length = 1308
Score = 23.0 bits (47), Expect = 5.4
Identities = 9/19 (47%), Positives = 11/19 (57%)
Query: 135 NEEKQDAENGKDLKLSTHI 153
NEE D NG +L TH+
Sbjct: 374 NEETIDINNGAELMQETHV 392
Database: bee
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 140,377
Number of sequences in database: 429
Lambda K H
0.322 0.138 0.435
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 124,432
Number of Sequences: 429
Number of extensions: 5071
Number of successful extensions: 24
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 10
Number of HSP's gapped (non-prelim): 15
length of query: 459
length of database: 140,377
effective HSP length: 60
effective length of query: 399
effective length of database: 114,637
effective search space: 45740163
effective search space used: 45740163
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 45 (22.2 bits)
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