Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000538-TA|BGIBMGA000538-PA|IPR004481|K+-dependent
Na+/Ca+ exchanger related-protein, IPR004836|Sodium/calcium exchanger
protein, IPR004837|Sodium/calcium exchanger membrane region
(459 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g47600.1 68415.m05939 magnesium/proton exchanger (MHX1) ident... 47 2e-05
At1g08960.1 68414.m00996 cation exchanger, putative (CAX11) simi... 47 2e-05
At5g17860.1 68418.m02093 cation exchanger, putative (CAX7) conta... 42 6e-04
At3g14070.1 68416.m01777 cation exchanger, putative (CAX9) simil... 37 0.032
At1g54115.1 68414.m06169 cation exchanger, putative 36 0.042
At5g17850.1 68418.m02092 cation exchanger, putative (CAX8) simil... 33 0.40
At4g06634.1 68417.m01050 zinc finger (C2H2 type) family protein ... 33 0.52
At4g04530.1 68417.m00660 Ulp1 protease family protein (snoR29) c... 32 0.69
At4g00990.1 68417.m00133 transcription factor jumonji (jmjC) dom... 32 0.69
At5g40450.1 68418.m04905 expressed protein 32 0.91
At4g37820.1 68417.m05351 expressed protein Kaposi's sarcoma-asso... 32 0.91
At5g64910.1 68418.m08165 expressed protein ; expression support... 31 1.6
At5g51630.2 68418.m06402 disease resistance protein (TIR-NBS-LRR... 31 1.6
At5g51630.1 68418.m06401 disease resistance protein (TIR-NBS-LRR... 31 1.6
At2g27470.1 68415.m03320 CCAAT-box binding transcription factor ... 31 1.6
At5g28320.1 68418.m03438 expressed protein This is likely a pseu... 31 2.1
At2g26460.1 68415.m03175 RED family protein similar to Red prote... 31 2.1
At1g22550.1 68414.m02816 proton-dependent oligopeptide transport... 31 2.1
At5g39690.1 68418.m04806 no apical meristem (NAM) protein-relate... 30 2.8
At3g60240.1 68416.m06732 MIF4G domain-containing protein / MA3 d... 30 2.8
At1g14770.2 68414.m01766 expressed protein 30 2.8
At1g14770.1 68414.m01765 expressed protein 30 2.8
At3g28770.1 68416.m03591 expressed protein 30 3.7
At1g22570.1 68414.m02818 proton-dependent oligopeptide transport... 30 3.7
At5g48610.1 68418.m06012 expressed protein ; expression supporte... 29 4.9
At5g37010.1 68418.m04438 expressed protein 29 4.9
At2g12875.1 68415.m01402 hypothetical protein 29 4.9
At4g36720.1 68417.m05210 abscisic acid-responsive HVA22 family p... 29 6.4
At4g32720.1 68417.m04657 RNA recognition motif (RRM)-containing ... 29 6.4
At4g06479.1 68417.m00885 hypothetical protein 29 6.4
At5g28400.1 68418.m03448 expressed protein 29 8.5
At4g35050.1 68417.m04974 WD-40 repeat protein (MSI3) contains 5 ... 29 8.5
At3g56150.1 68416.m06241 eukaryotic translation initiation facto... 29 8.5
At3g30420.1 68416.m03847 hypothetical protein low similarity to ... 29 8.5
At1g15660.1 68414.m01880 expressed protein similar to CENPCA pro... 29 8.5
>At2g47600.1 68415.m05939 magnesium/proton exchanger (MHX1)
identical to magnesium/proton exchanger AtMHX
[Arabidopsis thaliana] gi|6492237|gb|AAF14229;
Ca2+:Cation Antiporter (CaCA) Family member
PMID:11500563
Length = 539
Score = 47.2 bits (107), Expect = 2e-05
Identities = 32/110 (29%), Positives = 53/110 (48%), Gaps = 6/110 (5%)
Query: 263 PIHLVFLFTIPDCEKPRFKNWFPLTFIMCIVWIGSLSYIVAWMITIIGDTLMIPDSVMGI 322
P L+F F +P C W + FI +++I ++++V +I I V+
Sbjct: 352 PWKLLFAF-VPPCNIAH--GW--IAFICSLLFISGVAFVVTRFTDLISCVTGINPYVIAF 406
Query: 323 TFLAAGTSVPEAVSSVIVA-KQXXXXXXXXXXXXXXTFDILLCLGLPWLI 371
T LA+GTS P+ V+S I A +Q + +I + +G+PWLI
Sbjct: 407 TALASGTSWPDLVASKIAAERQLTADSAIANITCSNSVNIYVGIGVPWLI 456
Score = 30.7 bits (66), Expect = 2.1
Identities = 27/88 (30%), Positives = 41/88 (46%), Gaps = 8/88 (9%)
Query: 32 GDIGVGTIVGSAVFNILAVAACCGI--GAG---MVVPLDWW--PLTRDCLAYGITVSILI 84
G +G GT+VGSA F++ + A C + AG + L W L AY I + I++
Sbjct: 130 GGLGPGTLVGSAAFDLFPIHAVCVVVPKAGELKKISDLGVWLVELVWSFWAY-IWLYIIL 188
Query: 85 CIIHDEYVQWYEAFLLVSLYGVYICIMY 112
+ + EA L V YG+ + Y
Sbjct: 189 EVWSPNVITLVEALLTVLQYGLLLVHAY 216
>At1g08960.1 68414.m00996 cation exchanger, putative (CAX11) similar
to sodium/calcium exchanger protein [Mus musculus]
gi|13925661|gb|AAK49407; Ca2+:Cation Antiporter (CaCA)
Family member PMID:11500563
Length = 415
Score = 47.2 bits (107), Expect = 2e-05
Identities = 32/154 (20%), Positives = 70/154 (45%), Gaps = 3/154 (1%)
Query: 286 LTFIMCIVWIGSLSYIVAWMITIIGDTLMIPDSVMGITFLAAGTSVPEAVSSVIVAKQXX 345
+ FIM + WI +++ + + +G L +P +++G+T LA G SV + V+ V VAK
Sbjct: 260 VAFIMSVFWISTIAGELLNCLAALGTLLKLPPALLGLTVLAWGNSVGDLVADVAVAKAGR 319
Query: 346 XXXXXXXXXXXXTFDILLCLGLPWLIKASLTPAEPGHYWVKINSMGLEYSAIXXXXXXXX 405
F++L+ LG +++ + P Y + + +G+ + +
Sbjct: 320 PAMAMAGCFAGPMFNMLVGLGSALVMQTA--NVYPDAYKLGFH-VGIVIAFVFLLLSLMG 376
Query: 406 XXXXFWFNKFKLDAAVGRACLAMYAMFLILATLI 439
+++F++ G + +Y F ++ +I
Sbjct: 377 SLLVITWSRFRVPRFWGICLVGLYVAFTFVSLII 410
>At5g17860.1 68418.m02093 cation exchanger, putative (CAX7) contains
similarity to SWISS-PROT:Q9HC58 NKX3_HUMAN
Sodium/potassium/calcium exchanger 3 precursor {Homo
sapiens}; Ca2+:Cation Antiporter (CaCA) Family member
PMID:11500563
Length = 570
Score = 42.3 bits (95), Expect = 6e-04
Identities = 40/156 (25%), Positives = 66/156 (42%), Gaps = 6/156 (3%)
Query: 283 WFPLTFIMCIVWIGSLSYIVAWMITIIGDTLMIPDSVMGITFLAAGTSVPEAVSSVIVA- 341
W F M + W ++ + ++ +G+ I SV+G+T LA G S+ + +++V VA
Sbjct: 405 WLLGGFTMSVTWTYMIAQELVSLLISLGNIFGISPSVLGLTVLAWGNSLGDLIANVTVAF 464
Query: 342 --KQXXXXXXXXXXXXXXTFDILLCLGLPWLIKASLTPAEPGHYWVKINSMGLEYSAIXX 399
F+ ++ LG+P L+ +SL PG Y + ++ LE
Sbjct: 465 HGGNDGAQIALSGCYAGPLFNTVIGLGVP-LVISSLA-EYPGVYIIPSDNSLLETLGF-L 521
Query: 400 XXXXXXXXXXFWFNKFKLDAAVGRACLAMYAMFLIL 435
K +LD VG LA+Y FL L
Sbjct: 522 MVGLLWALVIMPKKKMRLDKLVGGGLLAIYLCFLSL 557
>At3g14070.1 68416.m01777 cation exchanger, putative (CAX9) similar
to sodium/calcium exchanger protein [Mus musculus]
gi|13925661|gb|AAK49407; Ca2+:Cation Antiporter (CaCA)
Family member PMID:11500563
Length = 643
Score = 36.7 bits (81), Expect = 0.032
Identities = 23/74 (31%), Positives = 37/74 (50%), Gaps = 1/74 (1%)
Query: 266 LVFLFTIPDCEKPRFK-NWFPLTFIMCIVWIGSLSYIVAWMITIIGDTLMIPDSVMGITF 324
L + T PD RF W FIM IVW ++ + ++ G+ I S++ +T
Sbjct: 461 LAYKNTEPDHPPRRFLIPWVLGGFIMSIVWFYMIANELVALLVTFGEIYGINPSILALTV 520
Query: 325 LAAGTSVPEAVSSV 338
LA G S+ + VS++
Sbjct: 521 LAWGNSMGDLVSNI 534
Score = 30.7 bits (66), Expect = 2.1
Identities = 26/107 (24%), Positives = 50/107 (46%), Gaps = 2/107 (1%)
Query: 18 PELFVNVIGTFITE-GDIGVGTIVGSAVFNILAVAACCGI-GAGMVVPLDWWPLTRDCLA 75
P++F ++ T+ G++G+ +++G AVF V + A V +D RD
Sbjct: 190 PDVFASIAAFVGTDKGEVGLNSVLGGAVFVTSVVVGIVSLCVADKEVKIDKNCFIRDLSF 249
Query: 76 YGITVSILICIIHDEYVQWYEAFLLVSLYGVYICIMYYDKPIQNFAK 122
+ ++ L+ I+ V A VS+Y VY ++ + ++ AK
Sbjct: 250 FLFSLVSLLVILMVGRVTVRIAIAFVSIYVVYAFLVAANVILRKHAK 296
>At1g54115.1 68414.m06169 cation exchanger, putative
Length = 644
Score = 36.3 bits (80), Expect = 0.042
Identities = 23/78 (29%), Positives = 39/78 (50%), Gaps = 1/78 (1%)
Query: 265 HLVFLFTIPDCEKPRFK-NWFPLTFIMCIVWIGSLSYIVAWMITIIGDTLMIPDSVMGIT 323
+L F T PD + W FIM IVW ++ + ++ G I S++G+T
Sbjct: 461 YLAFKNTEPDRPPQIYLIPWVLGGFIMSIVWFYMIANELVALLVTFGGIYGINPSILGLT 520
Query: 324 FLAAGTSVPEAVSSVIVA 341
LA G S+ + VS++ ++
Sbjct: 521 VLAWGNSMGDLVSNIALS 538
Score = 29.1 bits (62), Expect = 6.4
Identities = 25/97 (25%), Positives = 45/97 (46%), Gaps = 4/97 (4%)
Query: 18 PELFVNVIGTFI--TEGDIGVGTIVGSAVFNILAVAACCGI-GAGMVVPLDWWPLTRDCL 74
P++F + I F+ +G++G+ +++G AVF V + A V +D RD
Sbjct: 189 PDVFAS-IAAFVGSDKGEVGLNSVLGGAVFVTCVVVGIVSLCVADKEVKIDKKCFIRDLS 247
Query: 75 AYGITVSILICIIHDEYVQWYEAFLLVSLYGVYICIM 111
+ T+ L+ I+ V A VS+Y Y ++
Sbjct: 248 FFLFTLVALMVILMVGKVTVGIAIAFVSIYVFYASLV 284
>At5g17850.1 68418.m02092 cation exchanger, putative (CAX8) similar
to sodium/calcium exchanger protein [Mus musculus]
gi|13925661|gb|AAK49407; Ca2+:Cation Antiporter (CaCA)
Family member PMID:11500563
Length = 559
Score = 33.1 bits (72), Expect = 0.40
Identities = 14/59 (23%), Positives = 32/59 (54%)
Query: 283 WFPLTFIMCIVWIGSLSYIVAWMITIIGDTLMIPDSVMGITFLAAGTSVPEAVSSVIVA 341
W F+M + W + + ++T +G + S++G+T LA G S+ + ++++ +A
Sbjct: 397 WLAGGFVMSMTWSYISAQELVALLTSLGYIFGVSPSILGLTVLAWGNSIGDLITNLTMA 455
>At4g06634.1 68417.m01050 zinc finger (C2H2 type) family protein
contains Pfam PF00096: Zinc finger, C2H2 type
Length = 387
Score = 32.7 bits (71), Expect = 0.52
Identities = 23/83 (27%), Positives = 34/83 (40%), Gaps = 1/83 (1%)
Query: 157 DVPIEQRHQHNGNIKTSPLRQDAKEKI-LESVDVSDKVSASEEGKDKNVNIDMDSKPNEM 215
D + ++H NG +T + AK + V K S S K + +K
Sbjct: 285 DQDVYRKHASNGKGQTHKQQSRAKPNMRTPPAKVGKKGSTSSPAKARIAKKPWQAKETFE 344
Query: 216 EIASPEENLYQPTAEDNTDVEDG 238
E+ EE + T ED +VEDG
Sbjct: 345 EVEREEEEDSEETEEDRDNVEDG 367
>At4g04530.1 68417.m00660 Ulp1 protease family protein (snoR29)
contains Pfam profile PF02902: Ulp1 protease family,
C-terminal catalytic domain; snoR29 gene for small
nucleolar RNA GI:15706258
Length = 917
Score = 32.3 bits (70), Expect = 0.69
Identities = 23/78 (29%), Positives = 35/78 (44%), Gaps = 5/78 (6%)
Query: 166 HNGNIKTSPLRQDAKEKILESVDVS--DKVSASEE--GKDKNVNIDMDSKPNEMEIASPE 221
HN +PL+ ++ E D + D EE GK NVNI D PN+ + +
Sbjct: 575 HNPKDFQTPLQTIPEDTEAEDQDAALGDAAIGDEEMDGKSDNVNITEDHNPNDF-LTPQD 633
Query: 222 ENLYQPTAEDNTDVEDGS 239
E + +E D +DG+
Sbjct: 634 EAVLVSDSESGDDFDDGA 651
>At4g00990.1 68417.m00133 transcription factor jumonji (jmjC)
domain-containing protein contains Pfam domain, PF02373:
jmjC domain
Length = 840
Score = 32.3 bits (70), Expect = 0.69
Identities = 29/97 (29%), Positives = 45/97 (46%), Gaps = 6/97 (6%)
Query: 149 LSTHILKIDVPIEQRHQHNGNIK-TSPLRQDAKEKILES-VDVSDKVSASEEGKDKNVNI 206
+ H K + Q+ Q++G +K S L + +++ ES D+ DK A+ E + N +
Sbjct: 572 IKVHQKKYAEAMLQKQQYSGQVKEASELENKSMKEVDESKKDLKDK--AANEEQSNNSSR 629
Query: 207 DMDSKPNEMEIASPEENLYQPTAEDNTDVEDGSENSL 243
S E I S E+N QP +T VE E L
Sbjct: 630 PSGSGEAEKVIISKEDNPTQPAV--STSVESIQEQKL 664
>At5g40450.1 68418.m04905 expressed protein
Length = 2910
Score = 31.9 bits (69), Expect = 0.91
Identities = 32/116 (27%), Positives = 51/116 (43%), Gaps = 10/116 (8%)
Query: 129 SNMFKDNEEKQDAENGKDLKLSTHILKIDVPIEQRHQHNGNIKTSPLRQDAKEKILESVD 188
S KD++E++D+E K + S + DV E +H T P + K+ D
Sbjct: 445 SKDLKDDKEQEDSETVKTIISSDEVRSSDVQAEVFGEH-----TEPCSSEIKDD-RHGRD 498
Query: 189 VSDKVSASEEGKDKNVNIDMDSKPNEMEIASPEENLYQ-PTAEDNTDVEDGSENSL 243
S +V A E G + +D +S EI + E L + ED +++ E SL
Sbjct: 499 ESIEVKAKETGPEIETAVDGES---VHEIETTERVLLEAEKEEDKEEIKIDEEPSL 551
>At4g37820.1 68417.m05351 expressed protein Kaposi's
sarcoma-associated herpes-like virus ORF73gene, Kaposi's
sarcoma-associated herpesvirus, U52064
Length = 532
Score = 31.9 bits (69), Expect = 0.91
Identities = 24/82 (29%), Positives = 37/82 (45%), Gaps = 3/82 (3%)
Query: 176 RQDAKEKILESVDVSDKVSASEEGKDKNVNIDMDSKPNEMEIASPEENLYQPTAEDNTDV 235
R+D + +I E+ DV D+V E K++ K N EI EE + E+N +
Sbjct: 66 RKDLRPRIEETKDVKDEVEDEEGSKNEGGGDVSTDKENGDEIVEREEE--EKAVEENNEK 123
Query: 236 E-DGSENSLWKWPSNKSCLAKI 256
E +G+ N SN K+
Sbjct: 124 EAEGTGNEEGNEDSNNGESEKV 145
>At5g64910.1 68418.m08165 expressed protein ; expression supported
by MPSS
Length = 487
Score = 31.1 bits (67), Expect = 1.6
Identities = 23/114 (20%), Positives = 43/114 (37%)
Query: 133 KDNEEKQDAENGKDLKLSTHILKIDVPIEQRHQHNGNIKTSPLRQDAKEKILESVDVSDK 192
+D EE+++ +D + +K D Q+ + G + P + K K + K
Sbjct: 98 EDKEEEKEEAAREDKEEEEEAVKPDESASQKEEAKGASSSEPQLRRGKRKRGTKTEAEKK 157
Query: 193 VSASEEGKDKNVNIDMDSKPNEMEIASPEENLYQPTAEDNTDVEDGSENSLWKW 246
VS K S+P E E+L++ T T+ + + + W
Sbjct: 158 VSTPRAKKRAKTTKAQASEPEYFEEKRNLEDLWKATFSVGTEWDQQDALNEFNW 211
>At5g51630.2 68418.m06402 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1175
Score = 31.1 bits (67), Expect = 1.6
Identities = 18/63 (28%), Positives = 27/63 (42%), Gaps = 1/63 (1%)
Query: 95 YEAFLLVSLYGVYICIMYYDKPIQNFAKGSWKWVSNMFKDNEEKQDAENGKDLKLSTHIL 154
+E++ G CI+ P NF K SW WV F+D + + D H+L
Sbjct: 984 HESYYSEEFLGFKACIVLETPPDLNF-KQSWIWVRCYFRDKCVEHSVQFSWDSNKMDHLL 1042
Query: 155 KID 157
I+
Sbjct: 1043 MIN 1045
>At5g51630.1 68418.m06401 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1229
Score = 31.1 bits (67), Expect = 1.6
Identities = 18/63 (28%), Positives = 27/63 (42%), Gaps = 1/63 (1%)
Query: 95 YEAFLLVSLYGVYICIMYYDKPIQNFAKGSWKWVSNMFKDNEEKQDAENGKDLKLSTHIL 154
+E++ G CI+ P NF K SW WV F+D + + D H+L
Sbjct: 1048 HESYYSEEFLGFKACIVLETPPDLNF-KQSWIWVRCYFRDKCVEHSVQFSWDSNKMDHLL 1106
Query: 155 KID 157
I+
Sbjct: 1107 MIN 1109
>At2g27470.1 68415.m03320 CCAAT-box binding transcription factor
subunit HAP3-related contains Pfam PF00808 :
Histone-like transcription factor (CBF/NF-Y) and
archaeal histone; similar to polymerase epsilon p17
subunit (DNA polymerase epsilon subunit 3) (YB-like
protein 1) (YBL1) (NF-YB-like protein) (SP:Q9JKP7) [Mus
musculus];
Length = 275
Score = 31.1 bits (67), Expect = 1.6
Identities = 16/62 (25%), Positives = 32/62 (51%)
Query: 180 KEKILESVDVSDKVSASEEGKDKNVNIDMDSKPNEMEIASPEENLYQPTAEDNTDVEDGS 239
K KI E +D+ + ++ +++N N + D N+ E + +EN + ++ D E+
Sbjct: 150 KSKIDEETKRNDEETENDNTEEENGNDEEDENGNDEEDENDDENTEENGNDEENDDENTE 209
Query: 240 EN 241
EN
Sbjct: 210 EN 211
>At5g28320.1 68418.m03438 expressed protein This is likely a
pseudogene.
Length = 967
Score = 30.7 bits (66), Expect = 2.1
Identities = 22/77 (28%), Positives = 36/77 (46%), Gaps = 8/77 (10%)
Query: 175 LRQDAKEKILESVDVSDKVSASEEGKDKNVNIDMDSKPNEMEIASPEENLYQPTAEDNTD 234
L Q+ + +S ++ K S E G + +D+DS+ P++N YQ +E T
Sbjct: 480 LTQELSQMAQDSDEIFPKQSDEERGVARKHKLDVDSQ--------PQKNDYQKLSETGTA 531
Query: 235 VEDGSENSLWKWPSNKS 251
V+ S N + S KS
Sbjct: 532 VKGSSSNKREELKSAKS 548
>At2g26460.1 68415.m03175 RED family protein similar to Red protein
(RER protein) (Swiss-Prot:Q9Z1M8) [Mus musculus]
Length = 585
Score = 30.7 bits (66), Expect = 2.1
Identities = 25/114 (21%), Positives = 48/114 (42%), Gaps = 6/114 (5%)
Query: 122 KGSWKWVSNMFKDNEEKQDAENGKDLKLS-THILKIDVPIEQRHQHNGNIKTSPLRQDAK 180
KG ++N + +++ K ENG + +S +L P+ H ++ T
Sbjct: 228 KGKMSTIANDYDEDDNKSKIENGSSVNISDREVLPPPPPLPPGINHL-DLSTKQEEPPVA 286
Query: 181 EKILESVDVSDKVSASEEGKD---KNVNIDMDSKPNEME-IASPEENLYQPTAE 230
+ + V + V + GKD ++ DM+ P + E ++ +E Y P E
Sbjct: 287 RTDDDDIFVGEGVDYTVPGKDVTQSPISEDMEESPRDKEKVSYFDEPAYGPVQE 340
>At1g22550.1 68414.m02816 proton-dependent oligopeptide transport
(POT) family protein contains Pfam profile: PF00854 POT
family
Length = 564
Score = 30.7 bits (66), Expect = 2.1
Identities = 17/69 (24%), Positives = 35/69 (50%), Gaps = 4/69 (5%)
Query: 65 DWWPLTRDCLAYGITVSILICIIHDEYVQWYEAFLLVSLYGVY-ICIMYYDKPIQNFAKG 123
+WW L+ L+ GIT+SI++ + + V W F + L+ V + + + + + +G
Sbjct: 194 NWWFLS---LSAGITLSIIVVVYVQDNVNWALGFGIPCLFMVMALALFLFGRKTYRYPRG 250
Query: 124 SWKWVSNMF 132
+ +N F
Sbjct: 251 DREGKNNAF 259
>At5g39690.1 68418.m04806 no apical meristem (NAM) protein-related
contains Pfam PF02365 : No apical meristem (NAM)
protein; similar to NAC domain protein NAC2
(GI:21554255) {Arabidopsis thaliana}
Length = 294
Score = 30.3 bits (65), Expect = 2.8
Identities = 26/119 (21%), Positives = 49/119 (41%), Gaps = 6/119 (5%)
Query: 110 IMYYDKPIQNFAKGSWKWVSNMFKDNEEKQDAENGKDLKLSTHILKIDVPIEQRHQHNGN 169
+ YYD+ K W N +K +DL ST +V E++ Q G
Sbjct: 106 LAYYDRKPSEDVKTDWLMQEYSLDHNNDKVRLHFVQDLSYSTS--NKEVGEEKKKQKKGE 163
Query: 170 -IKTSPLRQDAKEKILESVDVSDKVSASEEGKDKNVNIDMDSKPNEMEIASPEENLYQP 227
++ S +Q + + + D S + D +D+ +P ++++ P + +YQP
Sbjct: 164 PVEASEGQQPCNAEYHQPLAPLD--SCQPQPHDLAEQLDL-HQPEQLQLQQPHDIVYQP 219
>At3g60240.1 68416.m06732 MIF4G domain-containing protein / MA3
domain-containing protein similar to eukaryotic protein
synthesis initiation factor [Homo sapiens] GI:3941724;
contains Pfam profiles PF02854: MIF4G domain, PF02847:
MA3 domain
Length = 1544
Score = 30.3 bits (65), Expect = 2.8
Identities = 16/60 (26%), Positives = 28/60 (46%), Gaps = 3/60 (5%)
Query: 142 ENGKDLKLSTHILKIDVPIEQRHQHNGNIKTSPLRQDA---KEKILESVDVSDKVSASEE 198
+ DL STH+L VP+ H ++T+ R + K+KI E + +D + +
Sbjct: 589 DTSSDLPHSTHVLSSTVPLGHSETHKSAVETNTRRNTSTKGKKKIKEILQKADAAGTTSD 648
>At1g14770.2 68414.m01766 expressed protein
Length = 429
Score = 30.3 bits (65), Expect = 2.8
Identities = 30/123 (24%), Positives = 51/123 (41%), Gaps = 17/123 (13%)
Query: 152 HILKIDVPIEQRHQHNGNIKTS----------PLRQDAKEKILESVDVSDKVSASEEGKD 201
HI P +++H H GN K S L ++ K+K++ D + + +E+G+
Sbjct: 196 HIGNAKEPTDEQHVHIGNEKESIDEQQVHIGLELNRNEKDKVIAIDDEDEPMHTNEKGEV 255
Query: 202 KNVNIDMDSKPNEMEIASPEENLYQPTAEDNTDVEDGSENSLWKWPSNKSCLAKITKIVT 261
+N D +S + + + + P NT E S + P + K TK T
Sbjct: 256 VVINDDTES-----DQGTTSDGTFSPRHNGNTTDETTFSPSSRRSPEDAH--VKCTKDGT 308
Query: 262 WPI 264
W I
Sbjct: 309 WLI 311
>At1g14770.1 68414.m01765 expressed protein
Length = 429
Score = 30.3 bits (65), Expect = 2.8
Identities = 30/123 (24%), Positives = 51/123 (41%), Gaps = 17/123 (13%)
Query: 152 HILKIDVPIEQRHQHNGNIKTS----------PLRQDAKEKILESVDVSDKVSASEEGKD 201
HI P +++H H GN K S L ++ K+K++ D + + +E+G+
Sbjct: 196 HIGNAKEPTDEQHVHIGNEKESIDEQQVHIGLELNRNEKDKVIAIDDEDEPMHTNEKGEV 255
Query: 202 KNVNIDMDSKPNEMEIASPEENLYQPTAEDNTDVEDGSENSLWKWPSNKSCLAKITKIVT 261
+N D +S + + + + P NT E S + P + K TK T
Sbjct: 256 VVINDDTES-----DQGTTSDGTFSPRHNGNTTDETTFSPSSRRSPEDAH--VKCTKDGT 308
Query: 262 WPI 264
W I
Sbjct: 309 WLI 311
>At3g28770.1 68416.m03591 expressed protein
Length = 2081
Score = 29.9 bits (64), Expect = 3.7
Identities = 31/124 (25%), Positives = 52/124 (41%), Gaps = 8/124 (6%)
Query: 133 KDNEEKQDAENGKDLKLSTHILKIDVPIEQRHQHNGNIKTSPLRQDAKE--KILESVDVS 190
K E+K+D E +D +++ K D +++ QH +K +++ KE + E+ ++
Sbjct: 1112 KKEEDKKDMEKLEDQ--NSNKKKEDKNEKKKSQHVKLVKKESDKKEKKENEEKSETKEIE 1169
Query: 191 DKVSASEEGKDKNVNIDMDS-KPNEMEIASPEENLYQPTAED---NTDVEDGSENSLWKW 246
S E K D K E E+ EE + ED T VE+ + K
Sbjct: 1170 SSKSQKNEVDKKEKKSSKDQQKKKEKEMKESEEKKLKKNEEDRKKQTSVEENKKQKETKK 1229
Query: 247 PSNK 250
NK
Sbjct: 1230 EKNK 1233
Score = 29.5 bits (63), Expect = 4.9
Identities = 21/100 (21%), Positives = 42/100 (42%), Gaps = 1/100 (1%)
Query: 141 AENGKDLKLSTHILKIDVPIEQRHQHNGNIKTSPLRQDAKEKILESVDVSDKVSASEEGK 200
+E G++ K + D +E + + + +E + + D S +GK
Sbjct: 692 SEKGEEGKENNKDSMEDKKLENKESQTDSKDDKSVDDKQEEAQIYGGESKDDKSVEAKGK 751
Query: 201 DKNVNIDMDSKPNEMEIASPEENLYQPTAEDNTDVEDGSE 240
K + +K NE + + EEN+ Q +++ VE G +
Sbjct: 752 KKESKENKKTKTNENRVRNKEENV-QGNKKESEKVEKGEK 790
>At1g22570.1 68414.m02818 proton-dependent oligopeptide transport
(POT) family protein contains Pfam profile: PF00854 POT
family
Length = 565
Score = 29.9 bits (64), Expect = 3.7
Identities = 19/67 (28%), Positives = 34/67 (50%), Gaps = 4/67 (5%)
Query: 65 DWWPLTRDCLAYGITVSILICIIHDEYVQWYEAFLLVSLYGVY-ICIMYYDKPIQNFAKG 123
+WW L+ L+ GI++SI++ E V W F + L+ V + I + I + KG
Sbjct: 191 NWWFLS---LSAGISISIIVVAYVQENVNWAFGFGIPCLFMVMALAIFLLGRKIYRYPKG 247
Query: 124 SWKWVSN 130
+ V++
Sbjct: 248 HHEEVNS 254
>At5g48610.1 68418.m06012 expressed protein ; expression supported
by MPSS
Length = 470
Score = 29.5 bits (63), Expect = 4.9
Identities = 26/125 (20%), Positives = 53/125 (42%), Gaps = 3/125 (2%)
Query: 117 IQNFAKGSWKWVSNMFKDNEEKQDAENGKDLKLSTHILKIDVPIEQRHQHNGNIKTSPLR 176
+QN + G K+V ++ + ++A + + H + +V I ++ N I+ + R
Sbjct: 90 VQNNSNGESKYVQDLARRIRYDEEATGSQSAQRIDHPNQKNVGITEKAFENSPIEETSHR 149
Query: 177 QDAKEKILESVDVSDKVSASEEGKDKNVNIDMDSKPNEMEIASPEENLYQPTAEDNTDVE 236
D ++I + + + S E V+ D K E+ + P EN Q ++ +
Sbjct: 150 VDDNKRINNQKNFT--AAKSSENAVSRVSFGADHKRAEV-MGKPMENRDQVRQTESAEKS 206
Query: 237 DGSEN 241
EN
Sbjct: 207 HRKEN 211
>At5g37010.1 68418.m04438 expressed protein
Length = 637
Score = 29.5 bits (63), Expect = 4.9
Identities = 20/77 (25%), Positives = 37/77 (48%), Gaps = 6/77 (7%)
Query: 173 SPLRQDAKEKILESVDVSDKVSASEEGKDKNVNIDMDSKPNEMEIASPEENLYQPTAEDN 232
+PL+ +A+EK + V + +EE K + D +SKP + ++ +++
Sbjct: 36 TPLKLEAQEK---KIQVEESKPRNEEEK---IQEDNNSKPRKEVFVIKHRRSHEKSSKTT 89
Query: 233 TDVEDGSENSLWKWPSN 249
TD ED S + + SN
Sbjct: 90 TDPEDSSVSDVKSTGSN 106
>At2g12875.1 68415.m01402 hypothetical protein
Length = 325
Score = 29.5 bits (63), Expect = 4.9
Identities = 29/114 (25%), Positives = 53/114 (46%), Gaps = 6/114 (5%)
Query: 133 KDNEEKQDAEN-GKDLKLSTHILKIDVPIEQRHQHNGNIKTSPLRQDAKEKILE--SVDV 189
K+ EEK++ + G K S ++ + V + + + T + + K E S +
Sbjct: 44 KEEEEKEEEKKKGMTTKESPPMIIMPVKKKTGLKRKRGVATKLIDKGTKATTEEPSSTEQ 103
Query: 190 SDKVSASEEGK-DKNVNIDMDSKPNEMEIASPEENLYQPTAEDNTDVEDGSENS 242
+ + A +E K DKN + S+ +E E + EE+ + E N D E+ S +S
Sbjct: 104 NKAIEAVKEDKYDKNE--EEKSEKDEQEKSEEEESEEEEKEEGNDDGEESSNDS 155
>At4g36720.1 68417.m05210 abscisic acid-responsive HVA22 family
protein low similarity to SP|Q00765 Polyposis locus
protein 1 (TB2 protein) {Homo sapiens}; contains Pfam
profile PF03134: TB2/DP1, HVA22 family
Length = 227
Score = 29.1 bits (62), Expect = 6.4
Identities = 13/39 (33%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Query: 24 VIGTFITEGDIGVGTIVGSAVFNILAVAACCGIGAGMVV 62
++G+ +T G++G+ + NI+ ACC IG G+ V
Sbjct: 13 LLGSGLT-GEVGLRVLFSPLSSNIVLRTACCSIGIGLPV 50
>At4g32720.1 68417.m04657 RNA recognition motif (RRM)-containing
protein RNA-binding protein LAH1, Saccharomyces
cerevisiae, PIR2:B48600; contains InterPro entry
IPR000504: RNA-binding region RNP-1 (RNA recognition
motif) (RRM)
Length = 433
Score = 29.1 bits (62), Expect = 6.4
Identities = 17/61 (27%), Positives = 33/61 (54%), Gaps = 2/61 (3%)
Query: 126 KWVSNMFKDNEEKQDAENGKDLKLSTHILKIDVPIEQRHQHNGNIKTSPLRQDAKEKILE 185
K V++ + + + +++GK + ST +LK++ IEQ + + SP D K + +E
Sbjct: 76 KAVADTLRTSSALKISDDGKKVGRSTELLKLEDLIEQLNAR--TVAASPFSYDVKREDVE 133
Query: 186 S 186
S
Sbjct: 134 S 134
>At4g06479.1 68417.m00885 hypothetical protein
Length = 370
Score = 29.1 bits (62), Expect = 6.4
Identities = 12/29 (41%), Positives = 16/29 (55%)
Query: 117 IQNFAKGSWKWVSNMFKDNEEKQDAENGK 145
I N +K W MFK +E +D ENG+
Sbjct: 168 IPNSSKADSCWEDEMFKGDEPSEDEENGR 196
>At5g28400.1 68418.m03448 expressed protein
Length = 996
Score = 28.7 bits (61), Expect = 8.5
Identities = 21/77 (27%), Positives = 35/77 (45%), Gaps = 8/77 (10%)
Query: 175 LRQDAKEKILESVDVSDKVSASEEGKDKNVNIDMDSKPNEMEIASPEENLYQPTAEDNTD 234
L Q+ + +S ++ K S E G + +D+DS+ P++N YQ +E
Sbjct: 491 LTQELSQMAQDSDEIFPKQSDEERGVARKHKLDVDSQ--------PQKNDYQKLSETGNA 542
Query: 235 VEDGSENSLWKWPSNKS 251
V+ S N + S KS
Sbjct: 543 VKGSSSNKREELKSAKS 559
>At4g35050.1 68417.m04974 WD-40 repeat protein (MSI3) contains 5
WD-40 repeats (PF0400); identical to WD-40 repeat
protein MSI3 (SP:O22469) [Arabidopsis thaliana]
Length = 424
Score = 28.7 bits (61), Expect = 8.5
Identities = 13/51 (25%), Positives = 28/51 (54%)
Query: 192 KVSASEEGKDKNVNIDMDSKPNEMEIASPEENLYQPTAEDNTDVEDGSENS 242
K+S KD+ I ++ N +++ E++Y+ ED D ++G++N+
Sbjct: 366 KISDFAWNKDEPWVISSVAEDNSLQVWQMAESIYREDDEDEDDDDEGNQNA 416
>At3g56150.1 68416.m06241 eukaryotic translation initiation factor 3
subunit 8 / eIF3 p110 / eIF3c / p105 (TIF3C1) nearly
identical to SP|O49160 Eukaryotic translation initiation
factor 3 subunit 8 (eIF3 p110) (eIF3c) (p105)
{Arabidopsis thaliana}
Length = 900
Score = 28.7 bits (61), Expect = 8.5
Identities = 23/90 (25%), Positives = 40/90 (44%), Gaps = 7/90 (7%)
Query: 180 KEKILESVDVSDKVSASEEGKDKNVNIDMDSKPNEMEIASPEENLYQ-PTAEDNTDVEDG 238
K L D++ A E ++K D D ++ E+ +++ PT + +DV++
Sbjct: 150 KNNKLYEDDINKYREAPEVEEEKQPEDDDDDDDDDDEVEDDDDSSIDGPTVDPGSDVDEP 209
Query: 239 SENSLW-KWPSNKSCLA-----KITKIVTW 262
++N W K S K L K K +TW
Sbjct: 210 TDNLTWEKMLSKKDKLLEKLMNKDPKEITW 239
>At3g30420.1 68416.m03847 hypothetical protein low similarity to
SP|Q9UUA2 DNA repair and recombination protein pif1,
mitochondrial precursor {Schizosaccharomyces pombe}
Length = 837
Score = 28.7 bits (61), Expect = 8.5
Identities = 33/133 (24%), Positives = 56/133 (42%), Gaps = 8/133 (6%)
Query: 89 DEYVQWYEAFLLVSLYGVYICIMYYDKPIQNFAKGSWKWVSNMFKDNEEKQDAENGKDLK 148
DE QW ++LL SL ++ I+ Y + + S W S ++Q N L+
Sbjct: 224 DEAAQWSTSYLLRSL---FVLILIYCEVSEPLKLWSHCWESMADDVLRKQQRVLNFPQLE 280
Query: 149 LSTHILKIDVPIEQR---HQHNGNIKTSPLRQDAKEKILESVDVS--DKVSASEEGKDKN 203
L L+ IE QH ++ P ++ ILE V+ S + K++
Sbjct: 281 LKAKELEKYTLIEIETLLRQHEKSLSDYPEMPQPEKSILEEVNNSLLRQEFQINIDKERE 340
Query: 204 VNIDMDSKPNEME 216
+ ++ SK NE +
Sbjct: 341 THANLFSKLNEQQ 353
>At1g15660.1 68414.m01880 expressed protein similar to CENPCA
protein (GI:11863170) {Zea mays}
Length = 705
Score = 28.7 bits (61), Expect = 8.5
Identities = 21/80 (26%), Positives = 35/80 (43%), Gaps = 6/80 (7%)
Query: 161 EQRHQHNGNIKTSPLRQDAKEKILESVDVSDKVSASEEGKDKNVNIDMDSKPNEMEIASP 220
+ H H+G I S L +D I +S++ SA + N+DM +K E+++
Sbjct: 390 DDSHIHSG-IHRSHLSRDGNPDICVMDSISNRSSAMLQK-----NVDMRTKGKEVDVPMS 443
Query: 221 EENLYQPTAEDNTDVEDGSE 240
E + T + D E E
Sbjct: 444 ESGANRNTGDRENDAEINEE 463
Database: arabidopsis
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.322 0.138 0.435
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,455,854
Number of Sequences: 28952
Number of extensions: 447061
Number of successful extensions: 1423
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 25
Number of HSP's that attempted gapping in prelim test: 1389
Number of HSP's gapped (non-prelim): 56
length of query: 459
length of database: 12,070,560
effective HSP length: 84
effective length of query: 375
effective length of database: 9,638,592
effective search space: 3614472000
effective search space used: 3614472000
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 61 (28.7 bits)
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