Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000537-TA|BGIBMGA000537-PA|IPR007087|Zinc finger,
C2H2-type
(949 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC1711.05 |||nucleocytoplasmic transport chaperone Srp40 |Schi... 44 1e-04
SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr 1|||M... 42 3e-04
SPAC57A7.06 |||U3 snoRNP protein Utp14 |Schizosaccharomyces pomb... 41 0.001
SPAC15A10.16 |bud6|aip3, fat1, SPAC15E1.01|actin interacting pro... 36 0.027
SPAC6G10.12c |ace2||transcription factor Ace2|Schizosaccharomyce... 34 0.081
SPAC22E12.19 ||SPAC2E12.01|histone deacetylase complex subunit |... 34 0.081
SPAC6G9.15c |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 33 0.25
SPAC694.06c |mrc1||mediator of replication checkpoint 1 |Schizos... 33 0.25
SPBC31E1.05 |gle1||RNA export factor Gle1 |Schizosaccharomyces p... 32 0.33
SPBC30B4.01c |wsc1|SPBC3D6.14c|transmembrane receptor Wsc1 |Schi... 32 0.43
SPAC6G9.08 |ubp6||ubiquitin C-terminal hydrolase Ubp6|Schizosacc... 31 0.76
SPAC4A8.16c |tif33|SPAC823.01c|translation initiation factor eIF... 31 1.00
SPAC144.09c |sfc2||RNA polymerase III transcription factor TFIII... 31 1.00
SPCC1235.01 ||SPCC320.02c|sequence orphan|Schizosaccharomyces po... 30 1.7
SPAC26F1.02 |||pinin homologue|Schizosaccharomyces pombe|chr 1||... 29 3.1
SPAC4F10.13c |mpd2||GYF domain|Schizosaccharomyces pombe|chr 1||... 29 3.1
SPAC25G10.04c |rec10|rec20|meiotic recombination protein Rec10 |... 29 4.0
SPAC19A8.05c |vps27|sst4|sorting receptor for ubiquitinated memb... 29 4.0
SPAC458.02c |||mRNP complex |Schizosaccharomyces pombe|chr 1|||M... 29 4.0
SPBC16E9.02c |||CUE domain protein Cue5 |Schizosaccharomyces pom... 29 4.0
SPAC4D7.13 |usp104|prp40|U1 snRNP-associated protein Usp104|Schi... 29 4.0
SPCC777.14 |prp4||serine/threonine protein kinase Prp4|Schizosac... 29 4.0
SPBC19F8.01c |spn7|SPBC21.08c|septin Spn7|Schizosaccharomyces po... 29 4.0
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 28 5.3
SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyce... 28 5.3
SPAC29A4.16 |hal4|sat4, ppk10|halotolerence protein 4|Schizosacc... 28 5.3
SPAPB1A10.06c |||ATP-dependent RNA helicase Dhr1 |Schizosaccharo... 28 5.3
SPCC1795.08c |||histone acetyltransferase complex subunit |Schiz... 28 5.3
SPCC1183.07 |||U3 snoRNP-associated protein Rrp5|Schizosaccharom... 28 7.0
SPAC2F7.07c |||histone deacetylase complex subunit Rco1 |Schizos... 28 7.0
SPBC337.03 |||conserved eukaryotic protein|Schizosaccharomyces p... 28 7.0
SPBC337.12 |||human ZC3H3 homolog|Schizosaccharomyces pombe|chr ... 28 7.0
SPBC713.09 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 27 9.3
SPAC29E6.10c ||SPAC30.14c|kinetochore protein |Schizosaccharomyc... 27 9.3
SPAC227.15 |||protein phosphatase regulatory subunit Reg1 |Schiz... 27 9.3
SPAC17H9.06c |||conserved fungal protein|Schizosaccharomyces pom... 27 9.3
SPCC63.08c |ppk36|atg1|serine/threonine protein kinase Ppk36|Sch... 27 9.3
SPCC132.01c ||SPCC1322.17c|DUF814 family protein|Schizosaccharom... 27 9.3
SPAC2C4.17c |||MS ion channel protein 2|Schizosaccharomyces pomb... 27 9.3
SPBC15C4.05 |||ATP-dependent RNA/DNA helicase |Schizosaccharomyc... 27 9.3
SPBC29A10.03c |rlf2|SPBC365.19c|chromatin remodeling complex sub... 27 9.3
SPBC3F6.05 |rga1||GTPase activating protein Rga1|Schizosaccharom... 27 9.3
SPAC2F7.16c |||phospholipase D |Schizosaccharomyces pombe|chr 1|... 27 9.3
SPAC26H5.11 |||spore wall assembly protein |Schizosaccharomyces ... 27 9.3
>SPBC1711.05 |||nucleocytoplasmic transport chaperone Srp40
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 451
Score = 44.0 bits (99), Expect = 1e-04
Identities = 39/230 (16%), Positives = 92/230 (40%), Gaps = 2/230 (0%)
Query: 53 TQSITVDDGSSIETKTNSDSEQSDSNSIHNNDDKIILVREAGTVKMAIQDDNCVTAENEC 112
+ S + + S ++S S SDS S +++ + + + +DN ++ +
Sbjct: 129 SSSSSDSESESSSEDSDSSSSSSDSESESSSEGSDSSSSSSSSESESSSEDNDSSSSSSD 188
Query: 113 GNRHDSYTGSETSSQAKSIEQLKITSIDIKYNYTGKDTSNSCDNTQNSDNTEESSDDCSE 172
S S++SS + E +S + + + +S S +++++D++ SSD SE
Sbjct: 189 SESESSSEDSDSSSSSSDSE--SESSSEGSDSSSSSSSSESESSSEDNDSSSSSSDSESE 246
Query: 173 PKADDAVSINXXXXXXXXXXXXXNKLKRTEVILIDNDRSDTQNGNSHDAHSPEVHEIESD 232
++D+ S + + D+ SD+ + S + S
Sbjct: 247 SSSEDSDSSSSSSDSESESSSKDSDSSSNSSDSEDDSSSDSSDSESESSSEDSDSTSSSS 306
Query: 233 NDETFTEPVVEKPKSNTNNSKTVLRRSSRTIKRRKFSDEIENGDDSEVEE 282
+ ++ + ++T S V +SS + S +++ D S++ +
Sbjct: 307 DSDSSSSSEDGNSNTDTTTSGEVSAQSSTNSTSSEESTSVKDEDSSKIHD 356
Score = 39.5 bits (88), Expect = 0.002
Identities = 43/237 (18%), Positives = 88/237 (37%), Gaps = 8/237 (3%)
Query: 12 SLDSPADLSNIQDDHKNXXXXXXXXXXXXXXXTNVKGSVLITQSITVDD---GSSIETKT 68
S DS ++ S+ D + ++ S ++S + D SS ++++
Sbjct: 150 SSDSESESSSEGSDSSSSSSSSESESSSEDNDSSSSSSDSESESSSEDSDSSSSSSDSES 209
Query: 69 NSDSEQSDSNSIHNNDDKIILVREAGTVKMAIQDDNCVTAENECGNRHDSYTGSETSSQA 128
S SE SDS+S ++ + + + + ++ + +E + S + SE+ S +
Sbjct: 210 ESSSEGSDSSSSSSSSESESSSEDNDSSSSSSDSES--ESSSEDSDSSSSSSDSESESSS 267
Query: 129 KSIEQLKITSIDIKYNYTGKDTSNSCDNTQNSDNTEESSDDCSEPKADDAVSINXXXXXX 188
K + +S + + S S ++++SD+T SSD S ++D S
Sbjct: 268 KDSDSSSNSSDSEDDSSSDSSDSESESSSEDSDSTSSSSDSDSSSSSEDGNSNTDTTTSG 327
Query: 189 XXXXXXXNKLKRTEVILIDNDRSDTQNGNSHDAHSPEVHEIESDNDETFTEPVVEKP 245
+E D + HD HE + + T + + P
Sbjct: 328 EVSAQSSTNSTSSEE---STSVKDEDSSKIHDKSLKRKHEDDESSTSTKSSRTTKTP 381
Score = 36.7 bits (81), Expect = 0.015
Identities = 32/162 (19%), Positives = 68/162 (41%), Gaps = 7/162 (4%)
Query: 118 SYTGSETSSQAKSIEQLKITSIDIKYNYTGKDTSNSCDNTQNSDNTEESSDDCSEPKADD 177
+++ SE S S ++ +S + + + D+S+S ++++ ++E+S D S +D
Sbjct: 96 AHSSSEASGSGSSSDESDSSSSESESSSEDNDSSSSSSDSESESSSEDS--DSSSSSSDS 153
Query: 178 AVSINXXXXXXXXXXXXXNKLKRTEVILIDNDRSDTQNGNSHDAHSPEVHEIESDNDETF 237
+ +E DND S + + +S S E + S + ++
Sbjct: 154 ESESSSEGSDSSSSSSSSESESSSE----DND-SSSSSSDSESESSSEDSDSSSSSSDSE 208
Query: 238 TEPVVEKPKSNTNNSKTVLRRSSRTIKRRKFSDEIENGDDSE 279
+E E S++++S + SS S + E+ SE
Sbjct: 209 SESSSEGSDSSSSSSSSESESSSEDNDSSSSSSDSESESSSE 250
Score = 31.5 bits (68), Expect = 0.57
Identities = 34/178 (19%), Positives = 68/178 (38%), Gaps = 12/178 (6%)
Query: 113 GNRHDSYTGSETSSQAKSIEQLKITSIDIKYNYTGKDTSNSCDNTQNSDNTEESSDDCSE 172
G+ S +SS+++S + +S + + + +S ++ +SD+ ESS + S+
Sbjct: 104 GSGSSSDESDSSSSESESSSEDNDSSSSSSDSESESSSEDSDSSSSSSDSESESSSEGSD 163
Query: 173 PKADDAVSINXXXXXXXXXXXXXNKLKRTEVILIDNDRSDTQ-----------NGNSHDA 221
+ + S + + +E D+D S + + +S +
Sbjct: 164 SSSSSSSSESESSSEDNDSSSSSSD-SESESSSEDSDSSSSSSDSESESSSEGSDSSSSS 222
Query: 222 HSPEVHEIESDNDETFTEPVVEKPKSNTNNSKTVLRRSSRTIKRRKFSDEIENGDDSE 279
S E DND + + E S+ ++ + S + K SD N DSE
Sbjct: 223 SSSESESSSEDNDSSSSSSDSESESSSEDSDSSSSSSDSESESSSKDSDSSSNSSDSE 280
>SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr
1|||Manual
Length = 500
Score = 42.3 bits (95), Expect = 3e-04
Identities = 40/196 (20%), Positives = 79/196 (40%), Gaps = 10/196 (5%)
Query: 127 QAKSIEQLKITSIDIKYNYTGKDTSNSCDNTQNSDNTEESSDDCSEPKADDAVSINXXXX 186
Q KS ++ + +S + + + S+S ++ +S +E SS + S ++++ V +
Sbjct: 74 QKKSKKKEESSSESESESSSSESESSSSESESSSSESESSSSESSSSESEEEVIVKTEEK 133
Query: 187 --XXXXXXXXXNKLKRTEVILIDNDRSDTQNGNSHDAHSPEVHEIESDNDETFTEPVVEK 244
+ E ++ ++ ++ + +S ++ S E S ++ E VVEK
Sbjct: 134 KESSSESSSSSESEEEEEAVVKIEEKKESSSDSSSESSSSESESESSSSESEEEEEVVEK 193
Query: 245 PKSNTNNSKTVLRRSSRTIKRRKFSDEIENGDDSEVEEIEMLDPLRHKMRPIVINDTKTL 304
+ S S + S + ++ DSE E D + K P
Sbjct: 194 TEEKKEGSSESSSDSESSSDSSSESGDSDSSSDSE-SESSSEDEKKRKAEP-------AS 245
Query: 305 VEMAAKHTKASQNDNK 320
E AK TK SQ+ N+
Sbjct: 246 EERPAKITKPSQDSNE 261
>SPAC57A7.06 |||U3 snoRNP protein Utp14 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 929
Score = 40.7 bits (91), Expect = 0.001
Identities = 42/183 (22%), Positives = 83/183 (45%), Gaps = 7/183 (3%)
Query: 143 YNYTGKDTSNSCDNTQNSDNTEESSDDCSEPKADDAV-SINXXXXXXXXXXXXXNKLKRT 201
+++ + S + +N +NT+E S + E +DD+V S N+L
Sbjct: 82 WSFNASKSGKSNKDHKNLNNTKEISLN-EEDDSDDSVNSDKLENEGSVGSSIDENELVDL 140
Query: 202 EVILIDNDRSDTQNGNSHDAHSPEVHEIESDNDETFTEPVVEKPKSNTNNSKTVLRRSSR 261
+ +L DND+ + N+ P I +++ T E ++E S++N+S++ L S+
Sbjct: 141 DTLL-DNDQPEKNESNTASTIRPPW--IGNNDHATDKENLLESDASSSNDSESELTDSAD 197
Query: 262 TIKRRKFSDEIENGDDSEVEEIEMLDPLRHKMRPIVIN-DTKTLVEMAAKHTKASQNDNK 320
+ EIE+ DS+ ++ E D +R +++ + K + A + S +DN
Sbjct: 198 NMNESDSESEIES-SDSDHDDGENSDSKLDNLRNYIVSLNQKRKKDEADAESVLSSDDND 256
Query: 321 KKE 323
E
Sbjct: 257 SIE 259
>SPAC15A10.16 |bud6|aip3, fat1, SPAC15E1.01|actin interacting
protein 3 homolog Bud6|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1385
Score = 35.9 bits (79), Expect = 0.027
Identities = 27/128 (21%), Positives = 57/128 (44%), Gaps = 5/128 (3%)
Query: 204 ILIDNDRSDTQNGNSHDAHSPEVHEIESDNDETFTEPVVEKPKSNTNNSKTVLRRSSRTI 263
IL+ RS T + N ++ + + S N TE PK + + T
Sbjct: 441 ILLPRGRSSTLSVNKKQFNADDGSTLNSPNSIRETEEYAASPKLEDIADEV---ETDATS 497
Query: 264 KRRKFSDEIENGDDSEVEEIEMLDPLRHKMRPIVINDTKTLVEMAAKHTKASQNDNKKKE 323
+R +I+ + SE + ++ L+ K+ ++ T+ ++ ++ +A+ N+ +KE
Sbjct: 498 QRELLERQIQKAESSE--DTSEIESLQGKLSLPQVSSTQQEIQPSSSVPEAASNEIAEKE 555
Query: 324 PTVVIIDT 331
P V I++
Sbjct: 556 PAVTAIES 563
>SPAC6G10.12c |ace2||transcription factor Ace2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 533
Score = 34.3 bits (75), Expect = 0.081
Identities = 18/72 (25%), Positives = 34/72 (47%), Gaps = 4/72 (5%)
Query: 598 MKNLELSKENNAPYAYLQNKCQFCTFKTESTLVMANHLETPHMKNNLYKCNFCEFEIRSP 657
M +L E + Y L N C + + + +H++T H+ + Y+C+ C+
Sbjct: 430 MASLYCGPEADGKYVCLYNGCNKRIARKYN---VESHIQT-HLSDRPYRCDLCKAGFVRH 485
Query: 658 HDILRHMKAEHN 669
HD+ RH++ N
Sbjct: 486 HDLKRHLRIHEN 497
>SPAC22E12.19 ||SPAC2E12.01|histone deacetylase complex subunit
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 661
Score = 34.3 bits (75), Expect = 0.081
Identities = 31/138 (22%), Positives = 58/138 (42%), Gaps = 6/138 (4%)
Query: 149 DTSNSCDNTQNSDNTEESSDDCSEPKADDAVSINXXXXXXXXXXXXXNK-LKRTEVILID 207
D N+ DNT + +N E ++++ + AD+ + K + + + ID
Sbjct: 360 DNMNTWDNTPSVENVESANENVNNHNADEQMDEKIKSLVEGNSAYEIEKGAQEPDPMSID 419
Query: 208 -NDRSDTQNGNSHDAHSPEVHEIESDNDETFTEPVVEKPKSNTNNSKTVLRRSSRTIKRR 266
D+S+T +G HD + E E +N T + + E T + S TIK+
Sbjct: 420 MTDKSETVSGFKHDVDVYDTAENEGNN--TLLQ-IKESVHEKTPTQDEPMDISQDTIKQE 476
Query: 267 KFSD-EIENGDDSEVEEI 283
+ + ++E S+ I
Sbjct: 477 DYYEPKLEQHSSSKRNSI 494
>SPAC6G9.15c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 498
Score = 32.7 bits (71), Expect = 0.25
Identities = 24/75 (32%), Positives = 38/75 (50%), Gaps = 4/75 (5%)
Query: 248 NTNNSKTVLRRSSRTIKRRKFSDEIENGDDSEVEEIEMLDPLRHKMRPIVINDTKT---L 304
+T SKT L+ SS + K +DE + E E+ + P+ + +++ TK+ L
Sbjct: 108 STRTSKT-LKNSSEVLTASKLTDEGNSKPLLEEGEVAVSSPILLDSKDVIMGVTKSSKNL 166
Query: 305 VEMAAKHTKASQNDN 319
VE A K KAS N +
Sbjct: 167 VEDAHKSKKASTNSS 181
>SPAC694.06c |mrc1||mediator of replication checkpoint 1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1019
Score = 32.7 bits (71), Expect = 0.25
Identities = 25/118 (21%), Positives = 51/118 (43%), Gaps = 1/118 (0%)
Query: 209 DRSDTQNGNSHDAHSPEVHEIESDNDETFTEPVVEKPKSNTNNSKTVLRRSSRTIKRRKF 268
++ +TQ G + SP +SD + + ++EK ++ + L ++S T +
Sbjct: 117 EQIETQEGGDNAKGSPSSENKDSDRNSRL-QQLIEKKRNALKKEQEDLIQNSATSHSKSD 175
Query: 269 SDEIENGDDSEVEEIEMLDPLRHKMRPIVINDTKTLVEMAAKHTKASQNDNKKKEPTV 326
+ + E+ DDS++ + L R I K L+E+ + ++ K E V
Sbjct: 176 NLDSESADDSDLADESELSKKYTSDRKIRNASKKALLELHRNTARLTRETALKPEVVV 233
>SPBC31E1.05 |gle1||RNA export factor Gle1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 480
Score = 32.3 bits (70), Expect = 0.33
Identities = 15/36 (41%), Positives = 23/36 (63%)
Query: 416 REFVDILGKELEEQKAKEDKERLEKNNQEKEKRAKE 451
RE ++ E E Q+ K+++ER +K EKEK+ KE
Sbjct: 115 RELLEKKRIEAERQRLKDEEERRKKELMEKEKKEKE 150
>SPBC30B4.01c |wsc1|SPBC3D6.14c|transmembrane receptor Wsc1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 374
Score = 31.9 bits (69), Expect = 0.43
Identities = 24/146 (16%), Positives = 55/146 (37%)
Query: 118 SYTGSETSSQAKSIEQLKITSIDIKYNYTGKDTSNSCDNTQNSDNTEESSDDCSEPKADD 177
S S TSS + S T+ + + +S+S ++ +S ++ SS S +
Sbjct: 130 SSVSSTTSSSSSSSPSSSSTTTTTSPSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS 189
Query: 178 AVSINXXXXXXXXXXXXXNKLKRTEVILIDNDRSDTQNGNSHDAHSPEVHEIESDNDETF 237
+ S + + + + S + + +S S I + + TF
Sbjct: 190 SSSSSSSSSSSSSSSSSSVPITSSTSSSHSSSSSSSSSSSSSSRPSSSSSFITTMSSSTF 249
Query: 238 TEPVVEKPKSNTNNSKTVLRRSSRTI 263
V P S+++++ + + S+ +
Sbjct: 250 ISTVTVTPSSSSSSTSSEVPSSTAAL 275
>SPAC6G9.08 |ubp6||ubiquitin C-terminal hydrolase
Ubp6|Schizosaccharomyces pombe|chr 1|||Manual
Length = 467
Score = 31.1 bits (67), Expect = 0.76
Identities = 19/70 (27%), Positives = 38/70 (54%), Gaps = 2/70 (2%)
Query: 253 KTVLRRSSRTIKRRKFSDEIENGDDSEVEEIEMLDPLRHKMRPIVINDTKTLVEMAAKHT 312
K + + ++ +++ KF E++ + E + L P+R K+R I ND + E AAK
Sbjct: 297 KASIGKKAKILRKVKFPFELDAVEFCTPELSQKLIPVRDKLREIEKNDEEH--ERAAKRI 354
Query: 313 KASQNDNKKK 322
K ++++K+
Sbjct: 355 KIQPSEDEKE 364
>SPAC4A8.16c |tif33|SPAC823.01c|translation initiation factor
eIF3c|Schizosaccharomyces pombe|chr 1|||Manual
Length = 918
Score = 30.7 bits (66), Expect = 1.00
Identities = 25/132 (18%), Positives = 50/132 (37%), Gaps = 3/132 (2%)
Query: 119 YTGSETSSQAKSI---EQLKITSIDIKYNYTGKDTSNSCDNTQNSDNTEESSDDCSEPKA 175
+ G + S A+S+ E+ ++TS +K S + S + ESS++ SE +
Sbjct: 5 FKGGSSDSDAESVDSSEENRLTSSRLKKQDDSSSEEESSEEESASSSESESSEEESESEE 64
Query: 176 DDAVSINXXXXXXXXXXXXXNKLKRTEVILIDNDRSDTQNGNSHDAHSPEVHEIESDNDE 235
+ ++ E + S+ + + ++ S E ES+++E
Sbjct: 65 SEVEVPKKKAVAASEDSESDSESSEEEEETESEEDSEVSDESESESESESESEEESESEE 124
Query: 236 TFTEPVVEKPKS 247
E P S
Sbjct: 125 ESDESERSGPSS 136
>SPAC144.09c |sfc2||RNA polymerase III transcription factor
TFIIIA|Schizosaccharomyces pombe|chr 1|||Manual
Length = 374
Score = 30.7 bits (66), Expect = 1.00
Identities = 14/35 (40%), Positives = 20/35 (57%), Gaps = 2/35 (5%)
Query: 871 VKIHPKMIYNRPPLNCQK--CQFRFFTDQGLERHL 903
+KIH + N P +C C +F+T Q LERH+
Sbjct: 70 LKIHKRCHTNVKPFSCHYDGCDAQFYTQQHLERHI 104
Score = 30.3 bits (65), Expect = 1.3
Identities = 20/64 (31%), Positives = 29/64 (45%), Gaps = 7/64 (10%)
Query: 849 EICDGYIKDLEQLRNHMQWIHKVKIHPKMIYNRPPLNCQKCQFRFFTDQGLERHLLGSHG 908
E CD +QLR+H+ H + P P Q C+ RF T Q L+ H+ +H
Sbjct: 118 EGCDECFSKHQQLRSHISACH-THLLPY------PCTYQDCELRFATKQKLQNHVNRAHE 170
Query: 909 LVTS 912
+ S
Sbjct: 171 KIIS 174
>SPCC1235.01 ||SPCC320.02c|sequence orphan|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 658
Score = 29.9 bits (64), Expect = 1.7
Identities = 22/113 (19%), Positives = 47/113 (41%), Gaps = 2/113 (1%)
Query: 55 SITVDDGSSIETKTNSDSEQSDSNSIHNNDDKIILVREAGTVKMAIQDDNCVTAENECGN 114
S+ + ++ KTN + QS + + N+ + + + K Q+ N +T + G
Sbjct: 431 SMVESEAKNLMNKTNYSANQSQNGNSQNSGNPVS--QAIDLAKSLFQNRNLLTKLAQSGV 488
Query: 115 RHDSYTGSETSSQAKSIEQLKITSIDIKYNYTGKDTSNSCDNTQNSDNTEESS 167
++ GS A ++ L + + N + +NS + NS+ + S
Sbjct: 489 LTNAAQGSSGGLSAAAVSGLIGSFMGSSSNNSNSSNNNSNTSNNNSNTSNNES 541
>SPAC26F1.02 |||pinin homologue|Schizosaccharomyces pombe|chr
1|||Manual
Length = 197
Score = 29.1 bits (62), Expect = 3.1
Identities = 18/89 (20%), Positives = 45/89 (50%), Gaps = 9/89 (10%)
Query: 257 RRSSRTIKRRKFSDEIENGDDSEVEEIEMLDPLRHKMRPIVINDTKTLVEMAAKHTKASQ 316
++S+R +KR + +++ + E++E+E + + ++ + + + ++A + +
Sbjct: 95 QKSARKVKRAELEEKLAKRREQELQELEKQEKIEAEILESRLQEQR---KVALDELELDR 151
Query: 317 NDNKKKEPTVVIIDTHANKQTINKTQPSI 345
ND KK ++D + KTQPS+
Sbjct: 152 NDLKK------VLDNKKSYYLRTKTQPSL 174
>SPAC4F10.13c |mpd2||GYF domain|Schizosaccharomyces pombe|chr
1|||Manual
Length = 992
Score = 29.1 bits (62), Expect = 3.1
Identities = 17/85 (20%), Positives = 39/85 (45%), Gaps = 1/85 (1%)
Query: 15 SPADLSNIQDDHKNXXXXXXXXXXXXXXXTNVKGSVLITQSITVDDGSSIETKTNSDSEQ 74
S A++SN+++D + + +V S + S++ T NSD +
Sbjct: 493 STAEVSNVRNDESKANSLSEISYNQQSECRSSELNVN-EDSANQKEESALGTSDNSDMYE 551
Query: 75 SDSNSIHNNDDKIILVREAGTVKMA 99
++ IH+N+ L ++ G++ ++
Sbjct: 552 KENTPIHHNESLNQLSKDLGSISLS 576
>SPAC25G10.04c |rec10|rec20|meiotic recombination protein Rec10
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 791
Score = 28.7 bits (61), Expect = 4.0
Identities = 26/128 (20%), Positives = 56/128 (43%), Gaps = 7/128 (5%)
Query: 49 SVLITQSITVDDGSSI-----ETKTNSDSEQSDSNSIHNNDDKIILVREAGTVKMAIQDD 103
+++++ +T+ + S I E+K + S+Q+ N H +D+ E + ++ DD
Sbjct: 343 AIIVSPKLTLRNRSIIQIKEGESKLPNTSKQASQNLPHLDDELAYQRFEDQVIDKSVCDD 402
Query: 104 NCVTAENECGNRHDSYTGSETSSQAKSIEQLKITSI-DIKYNYT-GKDTSNSCDNTQNSD 161
C EN + + S+ + + + T I D++ + K S N + +
Sbjct: 403 ECTNTENTPSSNIPADVKDSLSADDYAYDTKRKTQIEDLEEDQNKSKIASKDGTNLKEIN 462
Query: 162 NTEESSDD 169
+ E SD+
Sbjct: 463 SVPEFSDE 470
>SPAC19A8.05c |vps27|sst4|sorting receptor for ubiquitinated
membrane proteins, ESCRT 0 complex|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 610
Score = 28.7 bits (61), Expect = 4.0
Identities = 28/100 (28%), Positives = 43/100 (43%), Gaps = 10/100 (10%)
Query: 52 ITQSITVDDGSSIET-KTNSDSEQSDSNSIHNNDDKIILVREAGTVKMAIQDDNCVTAEN 110
+ S T+ SS K DS N ++D ++ + T+ D V+A N
Sbjct: 480 VRNSSTIPQASSSSVPKIVVDSSPVTENPPSHSD----VMGQKDTISSYYSTDTDVSA-N 534
Query: 111 ECGNRHDSYTGSETSSQAKSIEQLKITSIDIKYNYTGKDT 150
GNRHD S+T+S K+ + +ID NY D+
Sbjct: 535 VMGNRHDEVVFSDTASGEKNTK----LNIDESTNYYNTDS 570
>SPAC458.02c |||mRNP complex |Schizosaccharomyces pombe|chr
1|||Manual
Length = 468
Score = 28.7 bits (61), Expect = 4.0
Identities = 13/22 (59%), Positives = 18/22 (81%), Gaps = 1/22 (4%)
Query: 428 EQKAKEDKE-RLEKNNQEKEKR 448
EQ+AK ++ RLE+ N+EKEKR
Sbjct: 245 EQRAKRQEQFRLERENREKEKR 266
>SPBC16E9.02c |||CUE domain protein Cue5 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 569
Score = 28.7 bits (61), Expect = 4.0
Identities = 42/220 (19%), Positives = 78/220 (35%), Gaps = 16/220 (7%)
Query: 44 TNVKGSVLITQSITVDDGSSIETKTNSDSEQSDSNSIHNNDDKIILVREAGTVKMAIQDD 103
+N K VL ++ D +S+E + E + + D + E K A +
Sbjct: 357 SNAKSKVLTSEP---KDSTSVEAEKTETDEPAVGKGASDVSDTAE-ISEKTEAKNADSEA 412
Query: 104 NCVTAENECGNRHDSYTGSETSSQAKSIEQ--LKITS-------IDIKYNYTGKDTSNSC 154
N + +++ G +S + +S K +E+ KIT+ D+K T +N
Sbjct: 413 N-LEEKSDVGEEKESKDENNKASLHKDVEEKDTKITNEDTGKTETDVKAKETDSIEANDK 471
Query: 155 DNTQNSDNTEESSDDCSEPKADDAVSINXXXXXXXXXXXXXNKLKRTEVILIDNDRSDTQ 214
D +S TE+ ++ +AD V K T + D DT
Sbjct: 472 DEKTDSKETEDKVEETESKEAD--VKAKETDSIEVDDKEEKTDSKETADKVEQTDSKDTN 529
Query: 215 NGNSHDAHSPEVHEIESDNDETFTEPVVEKPKSNTNNSKT 254
+ D + + E + + E + E + +T
Sbjct: 530 EKPAKDDNKEANEKAEKVDSKDVKEKIEEAADLQNSGKET 569
>SPAC4D7.13 |usp104|prp40|U1 snRNP-associated protein
Usp104|Schizosaccharomyces pombe|chr 1|||Manual
Length = 695
Score = 28.7 bits (61), Expect = 4.0
Identities = 14/42 (33%), Positives = 27/42 (64%), Gaps = 2/42 (4%)
Query: 405 YVYEKPSLQPFREFVDILGKE--LEEQKAKEDKERLEKNNQE 444
Y+ + +L F + V L +E L++QK K++K R+E+ N++
Sbjct: 369 YLSKLDALVAFEDHVKHLEREYILDKQKQKKEKHRIERKNRD 410
>SPCC777.14 |prp4||serine/threonine protein kinase
Prp4|Schizosaccharomyces pombe|chr 3|||Manual
Length = 477
Score = 28.7 bits (61), Expect = 4.0
Identities = 15/46 (32%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Query: 214 QNGNSHDAHSPEVHEIESDNDE-TFTEPVVEKPKSNTNNSKTVLRR 258
Q GN H S +++ D D+ + T+P+ PK TN SK + +
Sbjct: 28 QTGNGHSDLSIPEKKLKEDVDQVSTTKPIEAVPKMKTNASKIEINK 73
>SPBC19F8.01c |spn7|SPBC21.08c|septin Spn7|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 428
Score = 28.7 bits (61), Expect = 4.0
Identities = 21/114 (18%), Positives = 52/114 (45%), Gaps = 2/114 (1%)
Query: 65 ETKTNSDSEQSDSNSIHNNDDKIILVREAGTVKMAIQDDNCVTAENECGNRHDSYTGSET 124
+ ++ + SE++++ S + + V ++ T ++ N + +N + DSY ++T
Sbjct: 311 DKRSVNGSERTETRSSIDQSEMRTNVSDS-TKSEELKKINSIKVDNTSSLKCDSYGNTKT 369
Query: 125 SSQAKSIEQLKITSIDIK-YNYTGKDTSNSCDNTQNSDNTEESSDDCSEPKADD 177
+ + EQ+ + I K + + + NS N + + DD S + ++
Sbjct: 370 KTNQLNCEQIGLEVISPKEFPHRTTSSRNSLPNNTTKELEMKKMDDLSHERYEN 423
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 28.3 bits (60), Expect = 5.3
Identities = 17/67 (25%), Positives = 29/67 (43%)
Query: 754 PMSVTNMAPGGSFRPRGRAPLSMPPRGAPIPVHGAPIIRGGVMIRHNSPAASSNYPTKNK 813
P+S + P + P+ AP PP + P AP + G P +S+ P+
Sbjct: 1686 PVSTPPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLPASSAPSVPN 1745
Query: 814 PGQQPSI 820
PG + ++
Sbjct: 1746 PGDRSAL 1752
Score = 27.5 bits (58), Expect = 9.3
Identities = 22/83 (26%), Positives = 36/83 (43%), Gaps = 6/83 (7%)
Query: 700 QIPCAKKFKPAINLSPPIEWEPPAKIPKITKSRSNVMGPYQNQFNRHVGNNINRPMSVTN 759
Q+P A P ++ P + +PP+ + T + S+ + P Q+ F HV + P
Sbjct: 1484 QLPPAVPNVPVPSMIPSVAQQPPSSVAPAT-APSSTLPPSQSSF-AHVPS----PAPPAP 1537
Query: 760 MAPGGSFRPRGRAPLSMPPRGAP 782
P + A SMP R +P
Sbjct: 1538 QHPSAAALSSAPADNSMPHRSSP 1560
>SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1036
Score = 28.3 bits (60), Expect = 5.3
Identities = 66/366 (18%), Positives = 113/366 (30%), Gaps = 14/366 (3%)
Query: 44 TNVKGSVLITQSITVDDGSSIETKTNSDSEQSDSNSIHNNDDKIILVREAGTVKMAIQDD 103
TN S T S T SS ++ S S+S+++ + +
Sbjct: 164 TNSTTSATPTSSATSSSLSSTAASNSATSSSLASSSLNSTTSATATSSSLSSTAAS---- 219
Query: 104 NCVTAENECGNRHDSYTGSETSSQAKSIEQLKITSIDIKYNYTGKDTSNSCDNTQNSDNT 163
N T+ + + +S T + +S + S T + N T TS S ++ NT
Sbjct: 220 NSATSSSLASSSLNSTTSATATSSSISSTVSSSTPLTSS-NSTTAATSASATSSSAQYNT 278
Query: 164 EESSDDCSEPKADDAVSINXXXXXXXXXXXXXNKLKRTEVILIDNDRSDTQNGNSHDAHS 223
S S P + S N + T S + NS A S
Sbjct: 279 S-SLLPSSTPSSTPLSSANSTTATSASSTPLTSVNSTTTTSASSTPLSSVSSANSTTATS 337
Query: 224 PEVHEIESDNDETFTE----PVVEKPKSN-TNNSKTVLRRSSRTIKRRKFSDEIENGDDS 278
+ S N T T P+ + T+ S T L + T S + + + +
Sbjct: 338 TSSTPLSSVNSTTATSASSTPLTSVNSTTATSASSTPLTSVNSTSATSASSTPLTSANST 397
Query: 279 EVEEIEMLDPLRHKMRPIVINDTKTLVEMAAKHTKASQNDNKKKEPTVVIIDTHANK--- 335
+ P + + + + +A T A+ + T A+
Sbjct: 398 TSTSVSSTAPSYNTSSVLPTSSVSSTPLSSANSTTATSASSTPLSSVNSTTATSASSTPL 457
Query: 336 QTINKTQPSINSTNAQTLYQNMIARGTTVTPVXXXXXXXXXXXXXQTQTILPSLTDDMYV 395
++N T + S+ T + A + TP+ T S T
Sbjct: 458 SSVNSTTATSASSTPLTSVNSTTATSASSTPLTSVNSTSATSASSTPLTSANSTTSTSVS 517
Query: 396 VEAPSF 401
APS+
Sbjct: 518 STAPSY 523
>SPAC29A4.16 |hal4|sat4, ppk10|halotolerence protein
4|Schizosaccharomyces pombe|chr 1|||Manual
Length = 636
Score = 28.3 bits (60), Expect = 5.3
Identities = 29/118 (24%), Positives = 49/118 (41%), Gaps = 9/118 (7%)
Query: 717 IEWEPPAKIPKITK--SRSNVMGPYQNQFNRHVGNNINRPMSVT-NMAPGGSFRPRGRAP 773
++ + P P ++ +++ M P N +RHV + N+P +V+ N A + P G P
Sbjct: 86 LQSQQPLSKPVVSSKPNQTTAMPPPSNNPSRHVSSTSNKPAAVSPNPAAHHAELPSGSVP 145
Query: 774 ----LSMPPRGAPIPVHGAPIIRGGVMIR-HNSPAASSNYPTKNKPGQQPSISITPLP 826
+S A H A ++ H A+S P+ G P +S T P
Sbjct: 146 PSASVSRANSTATTTPHKAGVVSNPAAANVHVLSVAASPNPSTPSNGPAP-VSTTATP 202
>SPAPB1A10.06c |||ATP-dependent RNA helicase Dhr1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1183
Score = 28.3 bits (60), Expect = 5.3
Identities = 14/46 (30%), Positives = 29/46 (63%), Gaps = 2/46 (4%)
Query: 135 KITSIDIKYNYTGKD--TSNSCDNTQNSDNTEESSDDCSEPKADDA 178
K+ + D +Y+ +D +++S + +++SDN+ E + D +EP DA
Sbjct: 220 KMLNEDPEYDSAEEDYLSTDSEEFSEDSDNSSEENKDTNEPSTKDA 265
>SPCC1795.08c |||histone acetyltransferase complex subunit
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 985
Score = 28.3 bits (60), Expect = 5.3
Identities = 20/55 (36%), Positives = 28/55 (50%), Gaps = 3/55 (5%)
Query: 227 HEIESDNDETFTEPVVEKPKSNTNNSKTVLR--RSSRTIKRRKFSDEIENGDDSE 279
H+ +S ++ETF E +V N NN+ VL R S FSD+I +SE
Sbjct: 542 HQKDS-HEETFNEQIVSHFNLNDNNNNKVLSIPRDSLQFYNAVFSDDIFVTTNSE 595
>SPCC1183.07 |||U3 snoRNP-associated protein Rrp5|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1690
Score = 27.9 bits (59), Expect = 7.0
Identities = 21/75 (28%), Positives = 35/75 (46%), Gaps = 7/75 (9%)
Query: 208 NDRSDTQNGNSHDAHSPEVHEIESDNDETFTEPVVEKPKSNTNNSKTVLRRSSRTIKRRK 267
+D S+++ G+ D S EV +ES D E E+P + N + + K
Sbjct: 1334 SDTSESEVGSKDDVQSEEVENLESAGD----EDEEEEPSALQANG---FDWTDGSTVFDK 1386
Query: 268 FSDEIENGDDSEVEE 282
+D+ E+ +D E EE
Sbjct: 1387 LADDTEDSEDEEDEE 1401
>SPAC2F7.07c |||histone deacetylase complex subunit Rco1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 607
Score = 27.9 bits (59), Expect = 7.0
Identities = 11/37 (29%), Positives = 25/37 (67%), Gaps = 2/37 (5%)
Query: 548 SLGKFFMDIGYNLVQEFVQSDLLK--QQNRKLNREKK 582
S+ FF +G ++ E++++D+LK + +R+ N E++
Sbjct: 358 SISSFFRGVGSGVMGEYIETDVLKHLKSSRRSNGEER 394
>SPBC337.03 |||conserved eukaryotic protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 387
Score = 27.9 bits (59), Expect = 7.0
Identities = 19/64 (29%), Positives = 29/64 (45%), Gaps = 6/64 (9%)
Query: 122 SETSSQAKSIEQLKITSIDIKYNYTGKDTSNSC-----DNTQNSDNTEESSDDCSEPKAD 176
SE KS+E + I++++ K + T T +T N E +S S P +D
Sbjct: 234 SEEEESLKSVESI-ISNLENKESTTATSTLTDAGFGDKSSTAGKHNVETTSPPSSSPNSD 292
Query: 177 DAVS 180
DA S
Sbjct: 293 DAYS 296
>SPBC337.12 |||human ZC3H3 homolog|Schizosaccharomyces pombe|chr
2|||Manual
Length = 377
Score = 27.9 bits (59), Expect = 7.0
Identities = 19/70 (27%), Positives = 37/70 (52%), Gaps = 3/70 (4%)
Query: 298 INDTKTLVEMAAKHTKASQNDNKKKEPTVVIIDTHANKQTINKTQP-SINSTNAQTLYQN 356
+N+ + L +A+ +Q N+K EPT V+ ANK T ++ P S++ + L ++
Sbjct: 1 MNEQQLLENIASLAGAINQYKNEKAEPTQVLDAAKANKNT--RSYPYSVSRNYSFILNKS 58
Query: 357 MIARGTTVTP 366
++ T +P
Sbjct: 59 NRSKSTAASP 68
>SPBC713.09 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 395
Score = 27.5 bits (58), Expect = 9.3
Identities = 43/246 (17%), Positives = 100/246 (40%), Gaps = 23/246 (9%)
Query: 97 KMAIQDDNCVTAENECGNRHDSYTGSETSSQAKSIEQLKITSIDIKYNYTGKDTSNSCDN 156
K ++ +DN N+ N+ + TG++ + ++ E + +++ S +
Sbjct: 28 KNSVAEDNVDRESNDGNNQVNEPTGNDNTQVVENTEDISASNVVSAEGAEASTGDASTQS 87
Query: 157 TQNSDNTEESSDD---CSEPKADDAVSINXXXXXXXXXXXXXNKLKRTEVI-----LIDN 208
+ S+N ++S D +P+ +D I ++ TEV +
Sbjct: 88 PETSENVVKNSVDESVAEKPEKEDLAVIESEDKAAKPDGEIKKNVE-TEVTSRSTSSQEK 146
Query: 209 DRSDTQNGNSHDAHSPEVHEI----ESDNDETFTEPVVEKPKSNTNNSKTVLRRSSRTIK 264
D + Q HD + + +I E ND T+ ++ ++ +T++ + ++
Sbjct: 147 DELEKQVKTLHDLNEQKDKKIKELKERINDLTYDYETLKANADDSEGKQTLVSKREAALE 206
Query: 265 RRKFSDEIENGDDSEVEEIEM---LDPLRHKMRPI------VINDTKTLVEMAAKHTKAS 315
+ S + ++ E++M D L+ + + + V K+L E A K ++A+
Sbjct: 207 EFQ-SKLLIRENEINKRELKMNGKEDDLKKREKDLENRLLKVEEHEKSLNERATKLSEAN 265
Query: 316 QNDNKK 321
+N N +
Sbjct: 266 ENFNNR 271
>SPAC29E6.10c ||SPAC30.14c|kinetochore protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1085
Score = 27.5 bits (58), Expect = 9.3
Identities = 10/25 (40%), Positives = 19/25 (76%)
Query: 427 EEQKAKEDKERLEKNNQEKEKRAKE 451
+E++ + +E LEK ++EKE+R +E
Sbjct: 713 KEEEERRRRELLEKESEEKERRLRE 737
>SPAC227.15 |||protein phosphatase regulatory subunit Reg1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 873
Score = 27.5 bits (58), Expect = 9.3
Identities = 15/33 (45%), Positives = 19/33 (57%), Gaps = 2/33 (6%)
Query: 205 LIDNDRSDTQNGNSHDAHSPEVHEIESDNDETF 237
L D+DRS T+N +H+ SP V E D D F
Sbjct: 210 LKDSDRSQTKN--THEETSPIVSSPEDDADAAF 240
>SPAC17H9.06c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 601
Score = 27.5 bits (58), Expect = 9.3
Identities = 21/91 (23%), Positives = 45/91 (49%), Gaps = 5/91 (5%)
Query: 199 KRTEVILIDNDRSDTQNGNSHDAHSPEVHEIESDNDETFTEPVVEKPKSNTNNSKTVLRR 258
K+ + +ID++ SDT G + + + + ++ +++ E+ + + SK V R+
Sbjct: 199 KKRKGFVIDSEDSDT--GIPREENVTITRKTKLSSNILYSDSDTER--QSDSGSKNVARQ 254
Query: 259 SSRTIKRRKFSDEIENGDDSEVEEIEMLDPL 289
SR ++RK D+S E ++L P+
Sbjct: 255 FSRIKRKRKVLSSSSEDDESSSPE-DLLKPI 284
>SPCC63.08c |ppk36|atg1|serine/threonine protein kinase
Ppk36|Schizosaccharomyces pombe|chr 3|||Manual
Length = 830
Score = 27.5 bits (58), Expect = 9.3
Identities = 27/113 (23%), Positives = 45/113 (39%), Gaps = 8/113 (7%)
Query: 702 PCAKKFKPAINLSPPIEWEPPAKIPKITKSRSN---VMGPYQNQFNRHVGN-NINRPMSV 757
P A F P + PI PAK+ T ++S+ V+ + + + N ++ S+
Sbjct: 402 PAASIFPPRLTSKQPIPMASPAKLTSDTSNKSSAYVVVDHHPIISSTQLSNESLTHEQSI 461
Query: 758 TNMAPGGSFRPRGRAPLSMPPRGAPIPVHGAPIIRGGVMIRHNSPAASSNYPT 810
+P + G S P AP+ H P + I + P A + PT
Sbjct: 462 NGNSPSPN---EGVFQGSFSPESAPVNNHAFP-HTSRMQIPYMKPNAFPSNPT 510
>SPCC132.01c ||SPCC1322.17c|DUF814 family
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1021
Score = 27.5 bits (58), Expect = 9.3
Identities = 20/62 (32%), Positives = 28/62 (45%), Gaps = 3/62 (4%)
Query: 555 DIGYNLVQEFVQSDLLKQQNRKLNREKKSGHSTKATESSIASLMKNLELSKENNAPYAYL 614
D N V F + + + N+K+ +G KA SIA MK L S + AYL
Sbjct: 933 DTVINAVPTFAPYNAMTKFNQKVKVMPGTGKVGKAARESIAYFMKKLPKSSKE---AAYL 989
Query: 615 QN 616
+N
Sbjct: 990 EN 991
>SPAC2C4.17c |||MS ion channel protein 2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 840
Score = 27.5 bits (58), Expect = 9.3
Identities = 30/112 (26%), Positives = 50/112 (44%), Gaps = 13/112 (11%)
Query: 68 TNSDSEQSDSNSIHNNDDKIILVREAGTVKMAI-QDDNCVTA------ENECGNRHDSYT 120
T+ + SD N H +D+ L + +A Q N ++A +NE + +YT
Sbjct: 715 THDEDNSSDDN--HKREDRGHLPAQYLRQSVATWQIPNLISAIEAYDSQNESSQENATYT 772
Query: 121 GSETSSQAKSIEQLKITSIDIKYN--YTGKDTSNSCDNTQ-NSDNTEESSDD 169
E++ A + S N T T N+ DNTQ +DNT+ ++D+
Sbjct: 773 VVESNGNANG-DNTATNSQGATDNGQTTTNTTQNNVDNTQATTDNTQANTDN 823
>SPBC15C4.05 |||ATP-dependent RNA/DNA helicase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1428
Score = 27.5 bits (58), Expect = 9.3
Identities = 14/42 (33%), Positives = 27/42 (64%), Gaps = 4/42 (9%)
Query: 140 DIKYNYTGKDTSNSCDNTQNSDNTEESSD----DCSEPKADD 177
+IK N +D+ ++ D++++ DN ES+D + +E +ADD
Sbjct: 374 EIKKNGIQEDSQSTDDSSKDDDNNSESNDMSPHNDAETRADD 415
>SPBC29A10.03c |rlf2|SPBC365.19c|chromatin remodeling complex
subunit Rlf2 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 544
Score = 27.5 bits (58), Expect = 9.3
Identities = 12/29 (41%), Positives = 18/29 (62%)
Query: 423 GKELEEQKAKEDKERLEKNNQEKEKRAKE 451
GKE + QK + +ER+ + E+ KR KE
Sbjct: 75 GKEKKLQKQRAQEERIRQKEAERLKREKE 103
>SPBC3F6.05 |rga1||GTPase activating protein
Rga1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1150
Score = 27.5 bits (58), Expect = 9.3
Identities = 25/101 (24%), Positives = 43/101 (42%), Gaps = 4/101 (3%)
Query: 266 RKFSDEIENGDDSEVEEIEMLDPLRHKMRPIVINDTKTLVEMAAKHTKASQNDNKKKEPT 325
R ++ +EN D S+ + + + DP + + V +T E A + N +
Sbjct: 574 RLYTILMENNDSSQRKPLSV-DPKQENVSSTV--ETAKQAETTASSDSFRKYANTLNDLR 630
Query: 326 VVIIDTHANKQTINKTQPSINSTNAQTLYQNMIARGTTVTP 366
+ + K T N+TQ S NST L +N+ G +P
Sbjct: 631 H-LKSSRNRKATSNETQSSSNSTETSKLSKNVSESGKDKSP 670
>SPAC2F7.16c |||phospholipase D |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1369
Score = 27.5 bits (58), Expect = 9.3
Identities = 13/44 (29%), Positives = 20/44 (45%)
Query: 212 DTQNGNSHDAHSPEVHEIESDNDETFTEPVVEKPKSNTNNSKTV 255
+T + +D +P+ S N + EKPK+ TNN V
Sbjct: 1278 ETHEKSENDPKNPKAGSQGSGNTSASEDSKTEKPKTRTNNGLQV 1321
>SPAC26H5.11 |||spore wall assembly protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 965
Score = 27.5 bits (58), Expect = 9.3
Identities = 26/122 (21%), Positives = 50/122 (40%), Gaps = 4/122 (3%)
Query: 247 SNTNNSKTVLRRSSRTIKRR-KFSDEIENGDDSEVEEIEMLDPLRHKMRPIVINDTKTLV 305
+NT S+++LRRSS +RR + + + D++ E L P ++ +
Sbjct: 99 NNTRASQSLLRRSSSFFRRRHRKNGTHASTDNNPFSESSTLQP--QTAERTSQQAVRSAI 156
Query: 306 EMAAKHTKASQNDNKKKEPTVVIIDTHANKQTINKTQPSIN-STNAQTLYQNMIARGTTV 364
+ + QN N + +I H + Q + P I+ + +L+ + R
Sbjct: 157 TETTNPSVSVQNSNSTSTSSAAMIIPHRDSQNSLEIAPLISPESQLSSLHPSSSRRHLIS 216
Query: 365 TP 366
TP
Sbjct: 217 TP 218
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.312 0.129 0.373
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,990,901
Number of Sequences: 5004
Number of extensions: 171825
Number of successful extensions: 724
Number of sequences better than 10.0: 44
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 33
Number of HSP's that attempted gapping in prelim test: 652
Number of HSP's gapped (non-prelim): 86
length of query: 949
length of database: 2,362,478
effective HSP length: 79
effective length of query: 870
effective length of database: 1,967,162
effective search space: 1711430940
effective search space used: 1711430940
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 58 (27.5 bits)
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