Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000537-TA|BGIBMGA000537-PA|IPR007087|Zinc finger,
C2H2-type
(949 letters)
Database: mosquito
2123 sequences; 516,269 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY939827-1|AAY18208.1| 680|Anopheles gambiae CTCF-like protein ... 47 2e-06
AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 pro... 31 0.14
AF281078-2|AAF82132.1| 755|Anopheles gambiae vitellogenin 2 pro... 31 0.19
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different... 29 0.58
AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein. 28 1.0
AY280611-1|AAQ21364.1| 1102|Anopheles gambiae chloride/bicarbona... 26 4.1
>AY939827-1|AAY18208.1| 680|Anopheles gambiae CTCF-like protein
protein.
Length = 680
Score = 47.2 bits (107), Expect = 2e-06
Identities = 28/85 (32%), Positives = 38/85 (44%), Gaps = 4/85 (4%)
Query: 617 KCQFCTFKTESTLVMANHLETPHMKNNLYKCNFCEFEIRSPHDILRHMKAEHN--IVGKL 674
+C++C + + S + +HL H YKC+ C R + RHM HN V
Sbjct: 356 RCEYCPYASISMRHLESHLLL-HTDQKPYKCDQCAQTFRQKQLLKRHMNYYHNPDYVAPT 414
Query: 675 EKAPSYHECPNCPFEDNGKGKLARH 699
KA + H CP C KG L RH
Sbjct: 415 PKAKT-HICPTCKRPFRHKGNLIRH 438
Score = 38.3 bits (85), Expect = 0.001
Identities = 35/147 (23%), Positives = 59/147 (40%), Gaps = 11/147 (7%)
Query: 553 FMDIGYNLVQEFVQSDLLKQQNRKLNREKKSGHSTKATESSIASLMKNLELSKENNAPYA 612
F D Y +VQE Q K Q R ++ +G + + S K LS+
Sbjct: 95 FEDPDY-IVQE-EQEPAKKTQTRGKRTQQSTGSTYMCNYCNYTS-NKLFLLSRHLKTHSE 151
Query: 613 YLQNKCQFCTFKTESTLVMANHLETPHMKNNLYKCNFCEFEIRSPHDILRHMKAEHNIVG 672
+KC C ++ + NH+ T H ++C C+ + +++RH++ H
Sbjct: 152 DRPHKCVVCERGFKTLASLQNHVNT-HTGTKPHRCKHCDNCFTTSGELIRHIRYRHT--- 207
Query: 673 KLEKAPSYHECPNCPFEDNGKGKLARH 699
+ P H+C C + KL RH
Sbjct: 208 --HERP--HKCTECDYASVELSKLKRH 230
Score = 33.5 bits (73), Expect = 0.027
Identities = 22/86 (25%), Positives = 36/86 (41%), Gaps = 12/86 (13%)
Query: 616 NKCQFCT--FKTESTLVMANHLETPHMKNNLYKCNFCEFEIRSPHDILRHMKAEHNIVGK 673
++C+ C F T L+ H+ H +KC C++ + RH++
Sbjct: 183 HRCKHCDNCFTTSGELI--RHIRYRHTHERPHKCTECDYASVELSKLKRHIRTHTG---- 236
Query: 674 LEKAPSYHECPNCPFEDNGKGKLARH 699
EK +CP+C + K KL RH
Sbjct: 237 -EKP---FQCPHCTYASPDKFKLTRH 258
>AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1
protein.
Length = 2051
Score = 31.1 bits (67), Expect = 0.14
Identities = 49/219 (22%), Positives = 88/219 (40%), Gaps = 13/219 (5%)
Query: 59 DDGSSIETKTNSDSEQSDSNSIHNNDDKIILVREAGTVKMAIQDDNCVTAENECGNRHDS 118
DD SS + ++SDS+ S+S ++ E + A Q GNR+
Sbjct: 363 DDSSSSSSSSSSDSDSDSSSSSDSSSSSSEEEAENFKISTAEQYKKQAKEVERRGNRNRR 422
Query: 119 YTGSETSSQ---AKSIEQLKITSIDIKYNYTGKDTSNSCDNTQNSDNTEES-SD--DCSE 172
+ Q A +Q ++ K N T D+S+S D++ +S ++ S SD D
Sbjct: 423 DLNAFKEKQYYEAYKRDQYRLR----KQNDTSSDSSSSDDSSSSSSSSSSSESDEHDFYS 478
Query: 173 PKADDAVSINXXXXXXXXXXXXXNKLKRTEVILIDNDRS-DTQNGNSHDAHSPEVHEIES 231
D+ S++ + + + + Q ++ DA S +++
Sbjct: 479 SSESDSDSLSSEEFYQPIPESMKDAPQTPFLPYFTGYKGYSVQYAHNVDA-SRYAYKLAY 537
Query: 232 DNDETFTEPVVEKPKSNTNNSKTVLRRSSRTIKRRKFSD 270
+ + E + + PKSNT N T+L R RT+ + D
Sbjct: 538 EIADELQE-ISQVPKSNTLNKFTILARVLRTMHYQDIYD 575
Score = 25.8 bits (54), Expect = 5.4
Identities = 10/36 (27%), Positives = 20/36 (55%)
Query: 142 KYNYTGKDTSNSCDNTQNSDNTEESSDDCSEPKADD 177
+YNY KD S ++ S ++ + SDD + +++
Sbjct: 1910 RYNYYYKDFDLSDSSSSESSSSSDESDDSNSSSSEE 1945
>AF281078-2|AAF82132.1| 755|Anopheles gambiae vitellogenin 2
protein.
Length = 755
Score = 30.7 bits (66), Expect = 0.19
Identities = 49/219 (22%), Positives = 88/219 (40%), Gaps = 13/219 (5%)
Query: 59 DDGSSIETKTNSDSEQSDSNSIHNNDDKIILVREAGTVKMAIQDDNCVTAENECGNRHDS 118
DD SS + ++SDS+ S+S ++ E + A Q GNR+
Sbjct: 363 DDSSSSSSSSSSDSDSDSSSSSDSSSSSSEEEAENFKISPAEQYKKQAKEVERRGNRNRR 422
Query: 119 YTGSETSSQ---AKSIEQLKITSIDIKYNYTGKDTSNSCDNTQNSDNTEES-SD--DCSE 172
+ Q A +Q ++ K N T D+S+S D++ +S ++ S SD D
Sbjct: 423 DLNAFKEKQYYEAYKRDQYRLR----KQNDTSSDSSSSDDSSSSSSSSSSSESDEHDFYS 478
Query: 173 PKADDAVSINXXXXXXXXXXXXXNKLKRTEVILIDNDRS-DTQNGNSHDAHSPEVHEIES 231
D+ S++ + + + + Q ++ DA S +++
Sbjct: 479 SSESDSDSLSSEEFYQPIPESMKDAPQTPFLPYFTGYKGYSVQYAHNVDA-SRYAYKLAY 537
Query: 232 DNDETFTEPVVEKPKSNTNNSKTVLRRSSRTIKRRKFSD 270
+ + E + + PKSNT N T+L R RT+ + D
Sbjct: 538 EIADELQE-ISQVPKSNTLNKFTILARVLRTMHYQDIYD 575
>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
differentiation regulator protein.
Length = 1283
Score = 29.1 bits (62), Expect = 0.58
Identities = 13/30 (43%), Positives = 22/30 (73%), Gaps = 2/30 (6%)
Query: 424 KELEEQKAKE--DKERLEKNNQEKEKRAKE 451
+EL EQ+ +E +KE+ EK +EKE+R ++
Sbjct: 472 RELREQREREQREKEQREKEQREKEERERQ 501
Score = 28.3 bits (60), Expect = 1.0
Identities = 11/26 (42%), Positives = 19/26 (73%)
Query: 426 LEEQKAKEDKERLEKNNQEKEKRAKE 451
+E +K +E +E+ E+ +EKE+R KE
Sbjct: 466 IEREKERELREQREREQREKEQREKE 491
Score = 28.3 bits (60), Expect = 1.0
Identities = 10/25 (40%), Positives = 18/25 (72%)
Query: 427 EEQKAKEDKERLEKNNQEKEKRAKE 451
+EQ+ KE +E+ E+ Q++EK +E
Sbjct: 485 KEQREKEQREKEERERQQREKEQRE 509
Score = 27.9 bits (59), Expect = 1.3
Identities = 13/27 (48%), Positives = 20/27 (74%), Gaps = 2/27 (7%)
Query: 427 EEQKAKEDKER--LEKNNQEKEKRAKE 451
+EQ+ KE++ER EK +E+E+R KE
Sbjct: 490 KEQREKEERERQQREKEQREREQREKE 516
Score = 26.2 bits (55), Expect = 4.1
Identities = 12/28 (42%), Positives = 20/28 (71%), Gaps = 1/28 (3%)
Query: 424 KELEEQKAKEDKERLEKNNQEKEKRAKE 451
KE E++ +E +ER E+ +EKE+R +E
Sbjct: 485 KEQREKEQREKEER-ERQQREKEQRERE 511
Score = 25.8 bits (54), Expect = 5.4
Identities = 8/24 (33%), Positives = 18/24 (75%)
Query: 428 EQKAKEDKERLEKNNQEKEKRAKE 451
EQ+ KE +E+ ++ +E+E++ +E
Sbjct: 481 EQREKEQREKEQREKEERERQQRE 504
Score = 25.0 bits (52), Expect = 9.4
Identities = 12/27 (44%), Positives = 19/27 (70%), Gaps = 2/27 (7%)
Query: 427 EEQKAKEDKER--LEKNNQEKEKRAKE 451
+E++ +E +ER EK +EKE+R KE
Sbjct: 470 KERELREQREREQREKEQREKEQREKE 496
>AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.
Length = 1133
Score = 28.3 bits (60), Expect = 1.0
Identities = 20/70 (28%), Positives = 35/70 (50%), Gaps = 4/70 (5%)
Query: 65 ETKTNSDSEQSDSNSIHNNDDKIILVREA-GTVKMAIQDDNCVTAENECGNRHDSYTGSE 123
+T + D+ ++D I + + + ++EA GTV+ +QD A E G R+ S +
Sbjct: 358 KTDSTIDTYRAD---IESKKQEYVALKEAYGTVRRTLQDVQAKQAAIERGMRNASERVTR 414
Query: 124 TSSQAKSIEQ 133
A+ IEQ
Sbjct: 415 IQKDARQIEQ 424
>AY280611-1|AAQ21364.1| 1102|Anopheles gambiae chloride/bicarbonate
anion exchanger protein.
Length = 1102
Score = 26.2 bits (55), Expect = 4.1
Identities = 10/33 (30%), Positives = 17/33 (51%)
Query: 693 KGKLARHQIPCAKKFKPAINLSPPIEWEPPAKI 725
+ K H + +F A+ + PP EW+P +I
Sbjct: 420 RAKRREHLLAGIDEFLDAVTVLPPGEWDPSIRI 452
Database: mosquito
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 516,269
Number of sequences in database: 2123
Lambda K H
0.312 0.129 0.373
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 859,081
Number of Sequences: 2123
Number of extensions: 35525
Number of successful extensions: 144
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 111
Number of HSP's gapped (non-prelim): 29
length of query: 949
length of database: 516,269
effective HSP length: 70
effective length of query: 879
effective length of database: 367,659
effective search space: 323172261
effective search space used: 323172261
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 52 (25.0 bits)
- SilkBase 1999-2023 -