BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000537-TA|BGIBMGA000537-PA|IPR007087|Zinc finger,
C2H2-type
(949 letters)
Database: bee
429 sequences; 140,377 total letters
Searching.....................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced prot... 31 0.033
AB208108-1|BAE72140.1| 92|Apis mellifera Broad complex zinc fi... 31 0.044
AY338499-1|AAR08420.1| 500|Apis mellifera Kruppel-like protein ... 29 0.24
AJ849455-1|CAH60991.1| 366|Apis mellifera twist protein protein. 29 0.24
L01588-1|AAA27735.1| 74|Apis mellifera zinc finger protein pro... 28 0.41
AF388659-3|AAK71993.1| 548|Apis mellifera 1D-myo-inositol-trisp... 26 1.7
AF388659-2|AAK71994.1| 463|Apis mellifera 1D-myo-inositol-trisp... 26 1.7
AF388659-1|AAK71995.1| 782|Apis mellifera 1D-myo-inositol-trisp... 26 1.7
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein. 26 1.7
L01587-1|AAA27734.1| 69|Apis mellifera zinc finger protein pro... 25 2.2
AB208106-1|BAE72138.1| 111|Apis mellifera Broad complex zinc fi... 25 2.2
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 24 5.1
AY823258-1|AAX18443.1| 145|Apis mellifera pburs protein. 24 6.7
AM420632-1|CAM06632.1| 145|Apis mellifera bursicon subunit beta... 24 6.7
AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex det... 23 8.9
>AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced protein
75 protein.
Length = 900
Score = 31.5 bits (68), Expect = 0.033
Identities = 22/78 (28%), Positives = 41/78 (52%), Gaps = 5/78 (6%)
Query: 278 SEVEEIEMLDPLRHKMRPIVINDTKTLVEMAAK-HTK---ASQNDNKKKEPTVVIIDTHA 333
SE +E+E + L+ ++ + DT +L++ A K H K Q D+ + EP V++ T +
Sbjct: 610 SEDKEVEDMPVLKRVLQAPPLYDTNSLMDEAYKPHKKFRALRQKDSAEAEPAVIVQHTQS 669
Query: 334 NKQTINKTQPSINSTNAQ 351
++ T P S ++Q
Sbjct: 670 QLH-LHLTSPPARSPSSQ 686
>AB208108-1|BAE72140.1| 92|Apis mellifera Broad complex zinc
finger domain-Z3 isoform protein.
Length = 92
Score = 31.1 bits (67), Expect = 0.044
Identities = 12/53 (22%), Positives = 23/53 (43%), Gaps = 1/53 (1%)
Query: 617 KCQFCTFKTESTLVMANHLETPHMKNN-LYKCNFCEFEIRSPHDILRHMKAEH 668
+C +C + H + H +++ LY C FC R+ + + H +H
Sbjct: 7 ECPYCRRNFSCYYSLKRHFQDKHEQSDTLYVCEFCNRRYRTKNSLTTHKSLQH 59
>AY338499-1|AAR08420.1| 500|Apis mellifera Kruppel-like protein 1
protein.
Length = 500
Score = 28.7 bits (61), Expect = 0.24
Identities = 14/51 (27%), Positives = 24/51 (47%), Gaps = 5/51 (9%)
Query: 617 KCQFCT--FKTESTLVMANHLETPHMKNNLYKCNFCEFEIRSPHDILRHMK 665
+C++C+ F + L + + H K YKC+ CE + RHM+
Sbjct: 121 QCEYCSKSFSVKENLSVHRRI---HTKERPYKCDVCERAFEHSGKLHRHMR 168
Score = 25.0 bits (52), Expect = 2.9
Identities = 15/63 (23%), Positives = 25/63 (39%), Gaps = 3/63 (4%)
Query: 618 CQFCTFKTESTLVMANHLETPHMKNNLYKCNFCEFEIRSPHDILRHMK--AEHNIVGKLE 675
C C V+ H + H +YKC C S + H+K ++ ++VG
Sbjct: 234 CDICGKSFGYNHVLKLH-QVAHYGEKVYKCTLCHETFGSKKTMELHIKTHSDSSVVGSPR 292
Query: 676 KAP 678
+P
Sbjct: 293 DSP 295
Score = 23.4 bits (48), Expect = 8.9
Identities = 8/24 (33%), Positives = 14/24 (58%)
Query: 909 LVTSSMQEAANKGKDAGRCPVCGR 932
L S ++ +G+D RC +CG+
Sbjct: 76 LYQSHLRSHGKEGEDPYRCNICGK 99
>AJ849455-1|CAH60991.1| 366|Apis mellifera twist protein protein.
Length = 366
Score = 28.7 bits (61), Expect = 0.24
Identities = 16/72 (22%), Positives = 35/72 (48%), Gaps = 1/72 (1%)
Query: 222 HSPEVHEIESDNDET-FTEPVVEKPKSNTNNSKTVLRRSSRTIKRRKFSDEIENGDDSEV 280
+ PE+ E + D +E + + + + ++++K+ + R KR++ S IEN ++E
Sbjct: 172 YKPEIMEYKPDVEEQRYKQVEISQMTEPSSSTKSYVLEGPRNGKRKRKSSTIENESETES 231
Query: 281 EEIEMLDPLRHK 292
+R K
Sbjct: 232 NASSTKTKMRRK 243
>L01588-1|AAA27735.1| 74|Apis mellifera zinc finger protein
protein.
Length = 74
Score = 27.9 bits (59), Expect = 0.41
Identities = 11/35 (31%), Positives = 16/35 (45%)
Query: 869 HKVKIHPKMIYNRPPLNCQKCQFRFFTDQGLERHL 903
H +K H ++ P +C C +F L RHL
Sbjct: 23 HHLKTHMRLHTGEKPYHCSHCDRQFVQVANLRRHL 57
>AF388659-3|AAK71993.1| 548|Apis mellifera
1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
Length = 548
Score = 25.8 bits (54), Expect = 1.7
Identities = 10/34 (29%), Positives = 16/34 (47%)
Query: 209 DRSDTQNGNSHDAHSPEVHEIESDNDETFTEPVV 242
D D + GN + +S E H+ + +D VV
Sbjct: 293 DVKDVEEGNVEETNSEETHQKDGSSDSVIKRTVV 326
>AF388659-2|AAK71994.1| 463|Apis mellifera
1D-myo-inositol-trisphosphate 3-kinaseisoform B protein.
Length = 463
Score = 25.8 bits (54), Expect = 1.7
Identities = 10/34 (29%), Positives = 16/34 (47%)
Query: 209 DRSDTQNGNSHDAHSPEVHEIESDNDETFTEPVV 242
D D + GN + +S E H+ + +D VV
Sbjct: 208 DVKDVEEGNVEETNSEETHQKDGSSDSVIKRTVV 241
>AF388659-1|AAK71995.1| 782|Apis mellifera
1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
Length = 782
Score = 25.8 bits (54), Expect = 1.7
Identities = 10/34 (29%), Positives = 16/34 (47%)
Query: 209 DRSDTQNGNSHDAHSPEVHEIESDNDETFTEPVV 242
D D + GN + +S E H+ + +D VV
Sbjct: 527 DVKDVEEGNVEETNSEETHQKDGSSDSVIKRTVV 560
>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
Length = 1598
Score = 25.8 bits (54), Expect = 1.7
Identities = 8/28 (28%), Positives = 16/28 (57%)
Query: 799 HNSPAASSNYPTKNKPGQQPSISITPLP 826
+ P+AS P +P + P++ ++P P
Sbjct: 1354 YRGPSASGGRPVPERPERVPTVDLSPSP 1381
>L01587-1|AAA27734.1| 69|Apis mellifera zinc finger protein
protein.
Length = 69
Score = 25.4 bits (53), Expect = 2.2
Identities = 9/35 (25%), Positives = 15/35 (42%)
Query: 869 HKVKIHPKMIYNRPPLNCQKCQFRFFTDQGLERHL 903
H ++ H + + P C+KC + L HL
Sbjct: 2 HHLEYHLRNHFGSKPFKCEKCSYSCVNKSMLNSHL 36
>AB208106-1|BAE72138.1| 111|Apis mellifera Broad complex zinc
finger domain-Z1 isoform protein.
Length = 111
Score = 25.4 bits (53), Expect = 2.2
Identities = 9/22 (40%), Positives = 14/22 (63%)
Query: 848 CEICDGYIKDLEQLRNHMQWIH 869
CE C+ + L +LR H+Q +H
Sbjct: 5 CEPCNKILTSLTRLRRHIQNVH 26
Score = 25.4 bits (53), Expect = 2.2
Identities = 10/24 (41%), Positives = 11/24 (45%)
Query: 847 ICEICDGYIKDLEQLRNHMQWIHK 870
IC IC L LRNH H+
Sbjct: 34 ICNICKRVYSSLNSLRNHKSIYHR 57
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 24.2 bits (50), Expect = 5.1
Identities = 10/24 (41%), Positives = 13/24 (54%)
Query: 763 GGSFRPRGRAPLSMPPRGAPIPVH 786
G S + PL P +G P+PVH
Sbjct: 221 GLSTESKADLPLLCPAQGFPVPVH 244
>AY823258-1|AAX18443.1| 145|Apis mellifera pburs protein.
Length = 145
Score = 23.8 bits (49), Expect = 6.7
Identities = 10/33 (30%), Positives = 15/33 (45%)
Query: 87 IILVREAGTVKMAIQDDNCVTAENECGNRHDSY 119
II + T+ D+NC T ++E D Y
Sbjct: 18 IIFIYSNETIAQVTDDENCETLQSEVHITKDEY 50
>AM420632-1|CAM06632.1| 145|Apis mellifera bursicon subunit beta
protein precursor protein.
Length = 145
Score = 23.8 bits (49), Expect = 6.7
Identities = 10/33 (30%), Positives = 15/33 (45%)
Query: 87 IILVREAGTVKMAIQDDNCVTAENECGNRHDSY 119
II + T+ D+NC T ++E D Y
Sbjct: 18 IIFIYSNETIAQVTDDENCETLQSEVHITKDEY 50
>AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex
determiner protein.
Length = 428
Score = 23.4 bits (48), Expect = 8.9
Identities = 21/94 (22%), Positives = 39/94 (41%), Gaps = 12/94 (12%)
Query: 83 NDDKIILVREAGTVKMAIQD----DNCVTAENECGNRHDSY-------TGSETSSQAKSI 131
N + +IL+R G I + N +T N+ HD+ +G+E+ A S
Sbjct: 156 NPEDVILIRRTGEGSKPIFEREEIKNVLTKINKI-KEHDTVLVVNIEKSGNESKKYATSS 214
Query: 132 EQLKITSIDIKYNYTGKDTSNSCDNTQNSDNTEE 165
L+ + D ++ + SC +N + E+
Sbjct: 215 NSLRSRTHDFQHTSSRYSRERSCSRDRNREYKEK 248
Database: bee
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 140,377
Number of sequences in database: 429
Lambda K H
0.312 0.129 0.373
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 252,067
Number of Sequences: 429
Number of extensions: 11080
Number of successful extensions: 45
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 25
Number of HSP's gapped (non-prelim): 23
length of query: 949
length of database: 140,377
effective HSP length: 64
effective length of query: 885
effective length of database: 112,921
effective search space: 99935085
effective search space used: 99935085
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 48 (23.4 bits)
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