GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000536-TA|BGIBMGA000536-PA|undefined
         (552 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskel...    30   0.19 
M93690-1|AAA29364.1|  613|Anopheles gambiae ORF1 protein.              29   0.43 
AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/T...    27   1.3  
AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/T...    27   1.3  
AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    26   3.0  
AF079312-1|AAC28093.1|  271|Anopheles gambiae 60S ribosomal prot...    25   5.3  

>CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative
           cytoskeletal structural protein protein.
          Length = 1645

 Score = 29.9 bits (64), Expect = 0.19
 Identities = 33/144 (22%), Positives = 55/144 (38%), Gaps = 10/144 (6%)

Query: 122 MPSDKSTKIPRPGISQSFRRMKTLLFKRSESPDVRSKSNPGSLDGSPNRSPQAQHVELDK 181
           +P   + +   P I +  R + T     ++ PD   +  PG   G   +   ++HVE + 
Sbjct: 265 LPKHGTARQHSPKIVKKTRHLST---SSADEPDACDRKAPGGGGGGGGKLSSSRHVEAE- 320

Query: 182 KRAVNFPENLLSLPQRLENMIAEQQRRLDKAVIDTAGRHSPPRTSQSMPQLTTETQPDVP 241
            R     ++LL    RL   +++     +    +TAG    P T+ S+  L       V 
Sbjct: 321 -RNARNAQHLLLRANRL--TVSDNHNLSNSGSGNTAGTIITPATTNSVDVLAVHNAKSVS 377

Query: 242 NLQGRRGTTAELQSQLPWAYIPAS 265
            L      T + Q Q   A  P S
Sbjct: 378 PLP---SYTQQQQQQQQSAAAPPS 398


>M93690-1|AAA29364.1|  613|Anopheles gambiae ORF1 protein.
          Length = 613

 Score = 28.7 bits (61), Expect = 0.43
 Identities = 16/69 (23%), Positives = 30/69 (43%)

Query: 170 RSPQAQHVELDKKRAVNFPENLLSLPQRLENMIAEQQRRLDKAVIDTAGRHSPPRTSQSM 229
           R  Q Q  +  +++     E   ++ +R +N   +QQ    +      GR+ PP+  Q +
Sbjct: 289 RQQQQQQQQRQQQQQQEQQELWTTVVRRRQNTQQQQQSNQPQQQQQQTGRYQPPQMRQQL 348

Query: 230 PQLTTETQP 238
            Q   + QP
Sbjct: 349 QQQQQQRQP 357


>AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/Thr
           phosphatase protein.
          Length = 1977

 Score = 27.1 bits (57), Expect = 1.3
 Identities = 12/25 (48%), Positives = 17/25 (68%), Gaps = 2/25 (8%)

Query: 163 SLDGSPNRSPQAQH--VELDKKRAV 185
           S DGSP RSP+  H  VE+D+ + +
Sbjct: 295 SSDGSPPRSPEGSHEEVEMDEPKKI 319


>AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/Thr
           phosphatase protein.
          Length = 1978

 Score = 27.1 bits (57), Expect = 1.3
 Identities = 12/25 (48%), Positives = 17/25 (68%), Gaps = 2/25 (8%)

Query: 163 SLDGSPNRSPQAQH--VELDKKRAV 185
           S DGSP RSP+  H  VE+D+ + +
Sbjct: 295 SSDGSPPRSPEGSHEEVEMDEPKKI 319


>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 25.8 bits (54), Expect = 3.0
 Identities = 13/37 (35%), Positives = 15/37 (40%), Gaps = 1/37 (2%)

Query: 505 PVRPSTSPEEDPRWRREWTANTGPPLPAPDYSPQQPR 541
           P RP+      P+  R    N GPP       PQ PR
Sbjct: 178 PARPNPGMPPGPQMMRP-PGNVGPPRTGTPTQPQPPR 213


>AF079312-1|AAC28093.1|  271|Anopheles gambiae 60S ribosomal protein
           rpL7a protein.
          Length = 271

 Score = 25.0 bits (52), Expect = 5.3
 Identities = 13/27 (48%), Positives = 14/27 (51%)

Query: 197 RLENMIAEQQRRLDKAVIDTAGRHSPP 223
           R EN IA  QR   KA    AG+  PP
Sbjct: 109 RPENPIARVQRLKAKAEAKAAGKEEPP 135


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.317    0.132    0.385 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 483,404
Number of Sequences: 2123
Number of extensions: 17589
Number of successful extensions: 40
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 36
Number of HSP's gapped (non-prelim): 6
length of query: 552
length of database: 516,269
effective HSP length: 67
effective length of query: 485
effective length of database: 374,028
effective search space: 181403580
effective search space used: 181403580
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 50 (24.2 bits)