Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000536-TA|BGIBMGA000536-PA|undefined
(552 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81562-8|CAB04562.1| 1304|Caenorhabditis elegans Hypothetical pr... 31 2.1
Z81474-9|CAB03907.1| 1304|Caenorhabditis elegans Hypothetical pr... 31 2.1
Z30423-1|CAA83003.1| 1681|Caenorhabditis elegans Hypothetical pr... 31 2.1
U23448-2|AAM81127.1| 1124|Caenorhabditis elegans Egg laying defe... 31 2.1
U23448-1|AAM81126.1| 1129|Caenorhabditis elegans Egg laying defe... 31 2.1
AF096618-1|AAD27790.1| 1129|Caenorhabditis elegans EGL-27 protein. 31 2.1
AF067948-7|AAC17699.1| 643|Caenorhabditis elegans Hypothetical ... 30 4.9
Z81525-1|CAB04256.1| 897|Caenorhabditis elegans Hypothetical pr... 29 8.5
Z50176-4|CAA90541.1| 546|Caenorhabditis elegans Hypothetical pr... 29 8.5
Z37139-7|CAA85485.1| 198|Caenorhabditis elegans Hypothetical pr... 29 8.5
U53147-6|AAA96117.1| 3766|Caenorhabditis elegans Regulator of pr... 29 8.5
U19615-1|AAB51351.1| 897|Caenorhabditis elegans Nucampholin pro... 29 8.5
AC024696-9|AAK84508.1| 1900|Caenorhabditis elegans Hypothetical ... 29 8.5
>Z81562-8|CAB04562.1| 1304|Caenorhabditis elegans Hypothetical
protein C18D4.1 protein.
Length = 1304
Score = 31.1 bits (67), Expect = 2.1
Identities = 17/50 (34%), Positives = 22/50 (44%), Gaps = 5/50 (10%)
Query: 478 WHHSRSVPDPAQSGRPFSYLEEIKRTVPVR-----PSTSPEEDPRWRREW 522
W S +P S RP SY +E T PST+ +E RR+W
Sbjct: 162 WRESMDIPKRKTSSRPSSYFKEDSSTNGASPKDGLPSTTEDETSELRRKW 211
>Z81474-9|CAB03907.1| 1304|Caenorhabditis elegans Hypothetical
protein C18D4.1 protein.
Length = 1304
Score = 31.1 bits (67), Expect = 2.1
Identities = 17/50 (34%), Positives = 22/50 (44%), Gaps = 5/50 (10%)
Query: 478 WHHSRSVPDPAQSGRPFSYLEEIKRTVPVR-----PSTSPEEDPRWRREW 522
W S +P S RP SY +E T PST+ +E RR+W
Sbjct: 162 WRESMDIPKRKTSSRPSSYFKEDSSTNGASPKDGLPSTTEDETSELRRKW 211
>Z30423-1|CAA83003.1| 1681|Caenorhabditis elegans Hypothetical protein
T20G5.1 protein.
Length = 1681
Score = 31.1 bits (67), Expect = 2.1
Identities = 20/79 (25%), Positives = 35/79 (44%), Gaps = 2/79 (2%)
Query: 167 SPNRSPQAQHVELDKKRAVNFPENLLSLPQR--LENMIAEQQRRLDKAVIDTAGRHSPPR 224
S + P+ V + A + P L+ L ++ L+N + R L +I TA R R
Sbjct: 982 SETQDPEDISVTVKAFMAADLPNELIELLEKIVLDNSAFSEHRNLQNLLILTAMRADRTR 1041
Query: 225 TSQSMPQLTTETQPDVPNL 243
+ + +L PD+ N+
Sbjct: 1042 VMEYIQKLDNYDAPDIANI 1060
>U23448-2|AAM81127.1| 1124|Caenorhabditis elegans Egg laying
defective protein 27,isoform b protein.
Length = 1124
Score = 31.1 bits (67), Expect = 2.1
Identities = 14/35 (40%), Positives = 18/35 (51%)
Query: 204 EQQRRLDKAVIDTAGRHSPPRTSQSMPQLTTETQP 238
EQ+RR ++ +T R SP S P LT E P
Sbjct: 504 EQRRRTPSSMSETPDRRSPSTVSNGAPNLTAEETP 538
>U23448-1|AAM81126.1| 1129|Caenorhabditis elegans Egg laying
defective protein 27,isoform a protein.
Length = 1129
Score = 31.1 bits (67), Expect = 2.1
Identities = 14/35 (40%), Positives = 18/35 (51%)
Query: 204 EQQRRLDKAVIDTAGRHSPPRTSQSMPQLTTETQP 238
EQ+RR ++ +T R SP S P LT E P
Sbjct: 507 EQRRRTPSSMSETPDRRSPSTVSNGAPNLTAEETP 541
>AF096618-1|AAD27790.1| 1129|Caenorhabditis elegans EGL-27 protein.
Length = 1129
Score = 31.1 bits (67), Expect = 2.1
Identities = 14/35 (40%), Positives = 18/35 (51%)
Query: 204 EQQRRLDKAVIDTAGRHSPPRTSQSMPQLTTETQP 238
EQ+RR ++ +T R SP S P LT E P
Sbjct: 507 EQRRRTPSSMSETPDRRSPSTVSNGAPNLTAEETP 541
>AF067948-7|AAC17699.1| 643|Caenorhabditis elegans Hypothetical
protein T27C4.2 protein.
Length = 643
Score = 29.9 bits (64), Expect = 4.9
Identities = 14/43 (32%), Positives = 26/43 (60%), Gaps = 3/43 (6%)
Query: 16 NISTAWASWLMVIIYSRLVVLFILNMFMIILVVVDCNAERTKY 58
N+ T W++ V+ +++ +L IL + + ILV ++C RT Y
Sbjct: 552 NVDTYWST---VMTIAKISILVILGIAIFILVYLNCTKFRTMY 591
>Z81525-1|CAB04256.1| 897|Caenorhabditis elegans Hypothetical
protein F33A8.1 protein.
Length = 897
Score = 29.1 bits (62), Expect = 8.5
Identities = 26/95 (27%), Positives = 45/95 (47%), Gaps = 12/95 (12%)
Query: 148 KRSESPD---VRSKSNPGSLDGSPNRSPQAQHVELDKKRAVNFPENLLSLPQRLENMIAE 204
+ SESP+ VRS+S S SP+RSP+ + +++ P LP++ +
Sbjct: 98 RESESPEKSPVRSRSPRRSSARSPSRSPRRRRERSSERKQSEEP---APLPEK------K 148
Query: 205 QQRRLDKAVIDTAGRHSPPRTSQSMPQLTTETQPD 239
++ LD T G + PP + M Q ++ Q +
Sbjct: 149 KKEPLDILRTRTGGAYIPPAKLRLMQQQISDKQSE 183
>Z50176-4|CAA90541.1| 546|Caenorhabditis elegans Hypothetical
protein C09G1.4 protein.
Length = 546
Score = 29.1 bits (62), Expect = 8.5
Identities = 27/93 (29%), Positives = 43/93 (46%), Gaps = 12/93 (12%)
Query: 150 SESPDVRSKSNPGSLDGSPNR------SPQAQHVELDKKRAVNFPENLLSLPQRLENMIA 203
S +P V S G+L +PNR +PQ Q D+ +++ P QRL ++
Sbjct: 204 SRTPPVACSSRTGTLQRTPNRRLPISSTPQPQPTYADQMQSLPEPPPYTIAMQRLRSVEQ 263
Query: 204 EQQRR-----LDKAVIDTAGRHSPPRTSQSMPQ 231
+ Q + K+V DT R R+S S+P+
Sbjct: 264 QPQESFRDAFIRKSVNDTLQRRYRQRSS-SLPR 295
>Z37139-7|CAA85485.1| 198|Caenorhabditis elegans Hypothetical
protein C14B1.2 protein.
Length = 198
Score = 29.1 bits (62), Expect = 8.5
Identities = 25/108 (23%), Positives = 47/108 (43%), Gaps = 4/108 (3%)
Query: 353 FGTYFGIDYKTLSDQLDASDGNLGSIYAKEITRQGAFYLMTIVLKGYVYHVLNLVLIILL 412
F + G+ K+ + +SDG + ++ E TR + I+L +Y + + I L
Sbjct: 61 FDSVTGLFGKSTATSRRSSDGLMTNLKKDEATRIWFAVYLNIILVALIY----VFITIKL 116
Query: 413 AMYTLEYGSALQKNEHSIHKMGILNAFDMQVNHGFNNDDELPRIPTRD 460
A+ +L G +K ++ ++ D V E+PR P +D
Sbjct: 117 ALMSLSEGKTERKKRNTFSSHVAYDSPDYNVPLTSIATREIPRGPVQD 164
>U53147-6|AAA96117.1| 3766|Caenorhabditis elegans Regulator of
presynaptic morphologyprotein 1 protein.
Length = 3766
Score = 29.1 bits (62), Expect = 8.5
Identities = 23/71 (32%), Positives = 39/71 (54%), Gaps = 8/71 (11%)
Query: 127 STKIPRPGISQSFRRMKTLLFKRSES---PDV-RSKSNPGSLDGSPNRSPQAQHVELDKK 182
ST+ P +S RR++ LL+K +E+ PD+ R ++ G LD +S LD++
Sbjct: 17 STETSIPEDRKSARRLRKLLYKCAENTCKPDILRVPAHCGKLDKEEEKS----KTPLDQQ 72
Query: 183 RAVNFPENLLS 193
+ +NF + L S
Sbjct: 73 QQINFHDILNS 83
>U19615-1|AAB51351.1| 897|Caenorhabditis elegans Nucampholin
protein.
Length = 897
Score = 29.1 bits (62), Expect = 8.5
Identities = 26/95 (27%), Positives = 45/95 (47%), Gaps = 12/95 (12%)
Query: 148 KRSESPD---VRSKSNPGSLDGSPNRSPQAQHVELDKKRAVNFPENLLSLPQRLENMIAE 204
+ SESP+ VRS+S S SP+RSP+ + +++ P LP++ +
Sbjct: 98 RESESPEKSPVRSRSPRRSSARSPSRSPRRRRERSSERKQSEEP---APLPEK------K 148
Query: 205 QQRRLDKAVIDTAGRHSPPRTSQSMPQLTTETQPD 239
++ LD T G + PP + M Q ++ Q +
Sbjct: 149 KKEPLDILRTRTGGAYIPPAKLRLMQQQISDKQSE 183
>AC024696-9|AAK84508.1| 1900|Caenorhabditis elegans Hypothetical
protein F07B7.12 protein.
Length = 1900
Score = 29.1 bits (62), Expect = 8.5
Identities = 23/71 (32%), Positives = 39/71 (54%), Gaps = 8/71 (11%)
Query: 127 STKIPRPGISQSFRRMKTLLFKRSES---PDV-RSKSNPGSLDGSPNRSPQAQHVELDKK 182
ST+ P +S RR++ LL+K +E+ PD+ R ++ G LD +S LD++
Sbjct: 17 STETSIPEDRKSARRLRKLLYKCAENTCKPDILRVPAHCGKLDKEEEKS----KTPLDQQ 72
Query: 183 RAVNFPENLLS 193
+ +NF + L S
Sbjct: 73 QQINFHDILNS 83
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.317 0.132 0.385
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,742,197
Number of Sequences: 27539
Number of extensions: 461359
Number of successful extensions: 1624
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 1617
Number of HSP's gapped (non-prelim): 13
length of query: 552
length of database: 12,573,161
effective HSP length: 85
effective length of query: 467
effective length of database: 10,232,346
effective search space: 4778505582
effective search space used: 4778505582
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 62 (29.1 bits)
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