Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000536-TA|BGIBMGA000536-PA|undefined
(552 letters)
Database: bee
429 sequences; 140,377 total letters
Searching.....................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ342041-1|ABC69933.1| 828|Apis mellifera STIP protein. 27 0.53
DQ325089-1|ABD14103.1| 185|Apis mellifera complementary sex det... 24 2.8
DQ325088-1|ABD14102.1| 185|Apis mellifera complementary sex det... 24 2.8
AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex det... 24 2.8
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 24 3.8
AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex det... 23 5.0
AJ276511-1|CAC06383.1| 352|Apis mellifera Antennapedia protein ... 23 5.0
DQ325124-1|ABD14138.1| 179|Apis mellifera complementary sex det... 23 8.7
DQ325123-1|ABD14137.1| 179|Apis mellifera complementary sex det... 23 8.7
DQ325122-1|ABD14136.1| 179|Apis mellifera complementary sex det... 23 8.7
DQ325083-1|ABD14097.1| 189|Apis mellifera complementary sex det... 23 8.7
DQ325077-1|ABD14091.1| 181|Apis mellifera complementary sex det... 23 8.7
DQ325076-1|ABD14090.1| 191|Apis mellifera complementary sex det... 23 8.7
AY569721-1|AAS86674.1| 400|Apis mellifera complementary sex det... 23 8.7
>DQ342041-1|ABC69933.1| 828|Apis mellifera STIP protein.
Length = 828
Score = 26.6 bits (56), Expect = 0.53
Identities = 15/40 (37%), Positives = 17/40 (42%), Gaps = 2/40 (5%)
Query: 483 SVPDPAQSG--RPFSYLEEIKRTVPVRPSTSPEEDPRWRR 520
SVP Q G SYL ++RT P P PR R
Sbjct: 708 SVPQSHQPGAMEQVSYLTSLERTQPTMSQMPPTAQPRMER 747
>DQ325089-1|ABD14103.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 24.2 bits (50), Expect = 2.8
Identities = 16/48 (33%), Positives = 22/48 (45%), Gaps = 6/48 (12%)
Query: 505 PVRPSTSPEED-PRWRREWTANTGPPLPAPDYSPQQPRRLKSALKSAY 551
P+ P S +E PR+R GPP P P + P RL+ L +
Sbjct: 139 PMGPWISMQEQIPRFRY-----IGPPTPFPRFIPPNAYRLRPPLNPRF 181
>DQ325088-1|ABD14102.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 24.2 bits (50), Expect = 2.8
Identities = 16/48 (33%), Positives = 22/48 (45%), Gaps = 6/48 (12%)
Query: 505 PVRPSTSPEED-PRWRREWTANTGPPLPAPDYSPQQPRRLKSALKSAY 551
P+ P S +E PR+R GPP P P + P RL+ L +
Sbjct: 139 PMGPWISMQEQIPRFRY-----IGPPTPFPRFIPPNAYRLRPPLNPRF 181
>AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex
determiner protein.
Length = 413
Score = 24.2 bits (50), Expect = 2.8
Identities = 16/48 (33%), Positives = 22/48 (45%), Gaps = 6/48 (12%)
Query: 505 PVRPSTSPEED-PRWRREWTANTGPPLPAPDYSPQQPRRLKSALKSAY 551
P+ P S +E PR+R GPP P P + P RL+ L +
Sbjct: 367 PMGPWISMQEQIPRFRY-----IGPPTPFPRFIPPNAYRLRPPLNPRF 409
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 23.8 bits (49), Expect = 3.8
Identities = 13/34 (38%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Query: 207 RRLDKAVIDTAGR-HSPPRTSQSMPQLTTETQPD 239
R L+ + +A R H P T+ + PQL TE D
Sbjct: 431 RELEAVNLGSACRIHGSPATTAAPPQLPTEESVD 464
>AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex
determiner protein.
Length = 406
Score = 23.4 bits (48), Expect = 5.0
Identities = 15/48 (31%), Positives = 22/48 (45%), Gaps = 6/48 (12%)
Query: 505 PVRPSTSPEED-PRWRREWTANTGPPLPAPDYSPQQPRRLKSALKSAY 551
P+ P S +E PR+R + GPP P P + P R + L +
Sbjct: 359 PMGPWISIQEQIPRFR-----HIGPPTPFPRFIPPNAYRFRPPLNPRF 401
>AJ276511-1|CAC06383.1| 352|Apis mellifera Antennapedia protein
protein.
Length = 352
Score = 23.4 bits (48), Expect = 5.0
Identities = 10/18 (55%), Positives = 11/18 (61%)
Query: 156 RSKSNPGSLDGSPNRSPQ 173
+SK PGS DG SPQ
Sbjct: 330 KSKGTPGSGDGDTEISPQ 347
>DQ325124-1|ABD14138.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 22.6 bits (46), Expect = 8.7
Identities = 15/48 (31%), Positives = 21/48 (43%), Gaps = 6/48 (12%)
Query: 505 PVRPSTSPEED-PRWRREWTANTGPPLPAPDYSPQQPRRLKSALKSAY 551
P+ P S +E PR+R GPP P P + P R + L +
Sbjct: 132 PMGPWISMQEQIPRFRY-----IGPPTPFPRFIPPNAYRFRPPLNPRF 174
>DQ325123-1|ABD14137.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 22.6 bits (46), Expect = 8.7
Identities = 15/48 (31%), Positives = 21/48 (43%), Gaps = 6/48 (12%)
Query: 505 PVRPSTSPEED-PRWRREWTANTGPPLPAPDYSPQQPRRLKSALKSAY 551
P+ P S +E PR+R GPP P P + P R + L +
Sbjct: 132 PMGPWISMQEQIPRFRY-----IGPPTPFPRFIPPNAYRFRPPLNPRF 174
>DQ325122-1|ABD14136.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 22.6 bits (46), Expect = 8.7
Identities = 15/48 (31%), Positives = 21/48 (43%), Gaps = 6/48 (12%)
Query: 505 PVRPSTSPEED-PRWRREWTANTGPPLPAPDYSPQQPRRLKSALKSAY 551
P+ P S +E PR+R GPP P P + P R + L +
Sbjct: 132 PMGPWISMQEQIPRFRY-----IGPPTPFPRFIPPNAYRFRPPLNPRF 174
>DQ325083-1|ABD14097.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 22.6 bits (46), Expect = 8.7
Identities = 15/48 (31%), Positives = 21/48 (43%), Gaps = 6/48 (12%)
Query: 505 PVRPSTSPEED-PRWRREWTANTGPPLPAPDYSPQQPRRLKSALKSAY 551
P+ P S +E PR+R GPP P P + P R + L +
Sbjct: 142 PMGPWISMQEQIPRFRY-----IGPPTPFPRFIPPNAYRFRPPLNPRF 184
>DQ325077-1|ABD14091.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.6 bits (46), Expect = 8.7
Identities = 15/48 (31%), Positives = 21/48 (43%), Gaps = 6/48 (12%)
Query: 505 PVRPSTSPEED-PRWRREWTANTGPPLPAPDYSPQQPRRLKSALKSAY 551
P+ P S +E PR+R GPP P P + P R + L +
Sbjct: 134 PMGPWISMQEQIPRFRY-----IGPPTPFPRFIPPNAYRFRPPLNPRF 176
>DQ325076-1|ABD14090.1| 191|Apis mellifera complementary sex
determiner protein.
Length = 191
Score = 22.6 bits (46), Expect = 8.7
Identities = 15/48 (31%), Positives = 21/48 (43%), Gaps = 6/48 (12%)
Query: 505 PVRPSTSPEED-PRWRREWTANTGPPLPAPDYSPQQPRRLKSALKSAY 551
P+ P S +E PR+R GPP P P + P R + L +
Sbjct: 144 PMGPWISMQEQIPRFRY-----IGPPTPFPRFIPPNAYRFRPPLNPRF 186
>AY569721-1|AAS86674.1| 400|Apis mellifera complementary sex
determiner protein.
Length = 400
Score = 22.6 bits (46), Expect = 8.7
Identities = 15/48 (31%), Positives = 21/48 (43%), Gaps = 6/48 (12%)
Query: 505 PVRPSTSPEED-PRWRREWTANTGPPLPAPDYSPQQPRRLKSALKSAY 551
P+ P S +E PR+R GPP P P + P R + L +
Sbjct: 353 PMGPWISMQEQIPRFRY-----IGPPTPFPRFIPPNAYRFRPPLNPRF 395
Database: bee
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 140,377
Number of sequences in database: 429
Lambda K H
0.317 0.132 0.385
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 138,552
Number of Sequences: 429
Number of extensions: 6084
Number of successful extensions: 39
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 32
Number of HSP's gapped (non-prelim): 16
length of query: 552
length of database: 140,377
effective HSP length: 61
effective length of query: 491
effective length of database: 114,208
effective search space: 56076128
effective search space used: 56076128
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 46 (22.6 bits)
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