Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000535-TA|BGIBMGA000535-PA|IPR008937|Ras guanine
nucleotide exchange factor, IPR001895|Guanine-nucleotide dissociation
stimulator CDC25
(433 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U58746-7|AAB00628.2| 461|Caenorhabditis elegans Hypothetical pr... 117 2e-26
Z69664-9|CAC42313.1| 1311|Caenorhabditis elegans Hypothetical pr... 65 8e-11
Z69664-8|CAA93519.2| 1470|Caenorhabditis elegans Hypothetical pr... 65 8e-11
Z68880-11|CAC42342.1| 1311|Caenorhabditis elegans Hypothetical p... 65 8e-11
Z68880-10|CAA93100.2| 1470|Caenorhabditis elegans Hypothetical p... 65 8e-11
AF308449-1|AAL09435.1| 1347|Caenorhabditis elegans PXF isoform C... 65 8e-11
AF308448-1|AAL09434.1| 1311|Caenorhabditis elegans PXF isoform B... 65 8e-11
AF308447-1|AAL09433.1| 1470|Caenorhabditis elegans PXF isoform A... 65 8e-11
AF170796-1|AAF22963.1| 1470|Caenorhabditis elegans RA-GEF protein. 65 8e-11
U42834-3|AAA83583.2| 860|Caenorhabditis elegans Hypothetical pr... 60 3e-09
Z70752-4|CAA94755.3| 654|Caenorhabditis elegans Hypothetical pr... 48 1e-05
AC024755-7|AAO91688.1| 833|Caenorhabditis elegans Hypothetical ... 47 3e-05
AC024755-6|AAF59639.1| 877|Caenorhabditis elegans Hypothetical ... 47 3e-05
Z30423-4|CAA83013.2| 1234|Caenorhabditis elegans Hypothetical pr... 38 0.010
AF251308-1|AAF82360.1| 1413|Caenorhabditis elegans guanine nucle... 34 0.23
AC006692-9|AAF39972.5| 1493|Caenorhabditis elegans Drosophila so... 34 0.23
AL023839-2|CAA19508.1| 1066|Caenorhabditis elegans Hypothetical ... 32 0.69
AB006659-1|BAA21847.1| 655|Caenorhabditis elegans E6-AP ubiquit... 32 0.69
Z83103-3|CAB05473.1| 376|Caenorhabditis elegans Hypothetical pr... 31 1.6
Z71266-4|CAA95843.1| 478|Caenorhabditis elegans Hypothetical pr... 30 3.7
AL132898-19|CAC14411.2| 417|Caenorhabditis elegans Hypothetical... 30 3.7
AL110500-7|CAB54490.1| 489|Caenorhabditis elegans Hypothetical ... 29 6.4
AL132860-15|CAB60497.1| 619|Caenorhabditis elegans Hypothetical... 29 8.5
>U58746-7|AAB00628.2| 461|Caenorhabditis elegans Hypothetical
protein R05G6.10 protein.
Length = 461
Score = 117 bits (281), Expect = 2e-26
Identities = 78/246 (31%), Positives = 131/246 (53%), Gaps = 24/246 (9%)
Query: 109 LVRVLRQWTSMFPYDFRDDRVMALVRSITQRCAAEHM-ESVRVEMSTTLEKLLDKLTALE 167
++R+ +W + PYDF+ + + + + + CA + + E+ +TL L+KL +
Sbjct: 106 ILRLCSEWATNIPYDFKTEYMRTRLNELLRLCAVDKTYQQKTTELQSTLRSSLNKL---D 162
Query: 168 QYEESLVDITQVSS--LDQLSQGDILTLGLTPV-----ELANQLTIVELHRLSFVGPEEF 220
+YE+++ ++ + S + Q D +T GL + +A QLT +E+ R S VG +E
Sbjct: 163 RYEKAVANLQKALSENTNLPEQSDSMT-GLFVLCNDAKTVAQQLTHIEMERFSMVGVDEI 221
Query: 221 VQTFAPIHPPQSTSACKTSISLHHIDTKCT-RNLEAYADWFNRLSYLVATDILKGVKSKY 279
VQ+ A P S I H + + T ++ Y +WFNRLS A ++LK K +
Sbjct: 222 VQSLAS--DPLS------EIGRHSKNKEGTISSISFYIEWFNRLSAFAAIEVLKQTKKRN 273
Query: 280 RARVIEQWVMTGRECFNLGNFNSLMAIISALNMSPVMRLKKTWSRTSAVCGQQLRQLELC 339
R V E + +EC +GNFNS+MAI++ L++ V RLKKTW R +L L+
Sbjct: 274 RVAVFEFMIDIAKECCEIGNFNSMMAIVAGLSLPAVSRLKKTWCRVEKA---KLEILQHQ 330
Query: 340 VEPTGN 345
++P+GN
Sbjct: 331 LDPSGN 336
>Z69664-9|CAC42313.1| 1311|Caenorhabditis elegans Hypothetical protein
T14G10.2b protein.
Length = 1311
Score = 65.3 bits (152), Expect = 8e-11
Identities = 36/109 (33%), Positives = 63/109 (57%), Gaps = 1/109 (0%)
Query: 241 SLHHIDTKC-TRNLEAYADWFNRLSYLVATDILKGVKSKYRARVIEQWVMTGRECFNLGN 299
+L +D+K + LE + FNR + VAT+I + RA++I++++ R C +L N
Sbjct: 921 NLFKLDSKYGSPKLEEFEQLFNREMWWVATEICTERHVQKRAKLIKKFIKVARYCRDLRN 980
Query: 300 FNSLMAIISALNMSPVMRLKKTWSRTSAVCGQQLRQLELCVEPTGNHAR 348
FNS+ AI+S L+ V RL +W R S+ + L ++ V+P+ N ++
Sbjct: 981 FNSMFAIMSGLDKPAVRRLHSSWERVSSKYIRMLDEIHQLVDPSRNMSK 1029
>Z69664-8|CAA93519.2| 1470|Caenorhabditis elegans Hypothetical protein
T14G10.2a protein.
Length = 1470
Score = 65.3 bits (152), Expect = 8e-11
Identities = 36/109 (33%), Positives = 63/109 (57%), Gaps = 1/109 (0%)
Query: 241 SLHHIDTKC-TRNLEAYADWFNRLSYLVATDILKGVKSKYRARVIEQWVMTGRECFNLGN 299
+L +D+K + LE + FNR + VAT+I + RA++I++++ R C +L N
Sbjct: 921 NLFKLDSKYGSPKLEEFEQLFNREMWWVATEICTERHVQKRAKLIKKFIKVARYCRDLRN 980
Query: 300 FNSLMAIISALNMSPVMRLKKTWSRTSAVCGQQLRQLELCVEPTGNHAR 348
FNS+ AI+S L+ V RL +W R S+ + L ++ V+P+ N ++
Sbjct: 981 FNSMFAIMSGLDKPAVRRLHSSWERVSSKYIRMLDEIHQLVDPSRNMSK 1029
>Z68880-11|CAC42342.1| 1311|Caenorhabditis elegans Hypothetical
protein T14G10.2b protein.
Length = 1311
Score = 65.3 bits (152), Expect = 8e-11
Identities = 36/109 (33%), Positives = 63/109 (57%), Gaps = 1/109 (0%)
Query: 241 SLHHIDTKC-TRNLEAYADWFNRLSYLVATDILKGVKSKYRARVIEQWVMTGRECFNLGN 299
+L +D+K + LE + FNR + VAT+I + RA++I++++ R C +L N
Sbjct: 921 NLFKLDSKYGSPKLEEFEQLFNREMWWVATEICTERHVQKRAKLIKKFIKVARYCRDLRN 980
Query: 300 FNSLMAIISALNMSPVMRLKKTWSRTSAVCGQQLRQLELCVEPTGNHAR 348
FNS+ AI+S L+ V RL +W R S+ + L ++ V+P+ N ++
Sbjct: 981 FNSMFAIMSGLDKPAVRRLHSSWERVSSKYIRMLDEIHQLVDPSRNMSK 1029
>Z68880-10|CAA93100.2| 1470|Caenorhabditis elegans Hypothetical
protein T14G10.2a protein.
Length = 1470
Score = 65.3 bits (152), Expect = 8e-11
Identities = 36/109 (33%), Positives = 63/109 (57%), Gaps = 1/109 (0%)
Query: 241 SLHHIDTKC-TRNLEAYADWFNRLSYLVATDILKGVKSKYRARVIEQWVMTGRECFNLGN 299
+L +D+K + LE + FNR + VAT+I + RA++I++++ R C +L N
Sbjct: 921 NLFKLDSKYGSPKLEEFEQLFNREMWWVATEICTERHVQKRAKLIKKFIKVARYCRDLRN 980
Query: 300 FNSLMAIISALNMSPVMRLKKTWSRTSAVCGQQLRQLELCVEPTGNHAR 348
FNS+ AI+S L+ V RL +W R S+ + L ++ V+P+ N ++
Sbjct: 981 FNSMFAIMSGLDKPAVRRLHSSWERVSSKYIRMLDEIHQLVDPSRNMSK 1029
>AF308449-1|AAL09435.1| 1347|Caenorhabditis elegans PXF isoform C
protein.
Length = 1347
Score = 65.3 bits (152), Expect = 8e-11
Identities = 36/109 (33%), Positives = 63/109 (57%), Gaps = 1/109 (0%)
Query: 241 SLHHIDTKC-TRNLEAYADWFNRLSYLVATDILKGVKSKYRARVIEQWVMTGRECFNLGN 299
+L +D+K + LE + FNR + VAT+I + RA++I++++ R C +L N
Sbjct: 798 NLFKLDSKYGSPKLEEFEQLFNREMWWVATEICTERHVQKRAKLIKKFIKVARYCRDLRN 857
Query: 300 FNSLMAIISALNMSPVMRLKKTWSRTSAVCGQQLRQLELCVEPTGNHAR 348
FNS+ AI+S L+ V RL +W R S+ + L ++ V+P+ N ++
Sbjct: 858 FNSMFAIMSGLDKPAVRRLHSSWERVSSKYIRMLDEIHQLVDPSRNMSK 906
>AF308448-1|AAL09434.1| 1311|Caenorhabditis elegans PXF isoform B
protein.
Length = 1311
Score = 65.3 bits (152), Expect = 8e-11
Identities = 36/109 (33%), Positives = 63/109 (57%), Gaps = 1/109 (0%)
Query: 241 SLHHIDTKC-TRNLEAYADWFNRLSYLVATDILKGVKSKYRARVIEQWVMTGRECFNLGN 299
+L +D+K + LE + FNR + VAT+I + RA++I++++ R C +L N
Sbjct: 921 NLFKLDSKYGSPKLEEFEQLFNREMWWVATEICTERHVQKRAKLIKKFIKVARYCRDLRN 980
Query: 300 FNSLMAIISALNMSPVMRLKKTWSRTSAVCGQQLRQLELCVEPTGNHAR 348
FNS+ AI+S L+ V RL +W R S+ + L ++ V+P+ N ++
Sbjct: 981 FNSMFAIMSGLDKPAVRRLHSSWERVSSKYIRMLDEIHQLVDPSRNMSK 1029
>AF308447-1|AAL09433.1| 1470|Caenorhabditis elegans PXF isoform A
protein.
Length = 1470
Score = 65.3 bits (152), Expect = 8e-11
Identities = 36/109 (33%), Positives = 63/109 (57%), Gaps = 1/109 (0%)
Query: 241 SLHHIDTKC-TRNLEAYADWFNRLSYLVATDILKGVKSKYRARVIEQWVMTGRECFNLGN 299
+L +D+K + LE + FNR + VAT+I + RA++I++++ R C +L N
Sbjct: 921 NLFKLDSKYGSPKLEEFEQLFNREMWWVATEICTERHVQKRAKLIKKFIKVARYCRDLRN 980
Query: 300 FNSLMAIISALNMSPVMRLKKTWSRTSAVCGQQLRQLELCVEPTGNHAR 348
FNS+ AI+S L+ V RL +W R S+ + L ++ V+P+ N ++
Sbjct: 981 FNSMFAIMSGLDKPAVRRLHSSWERVSSKYIRMLDEIHQLVDPSRNMSK 1029
>AF170796-1|AAF22963.1| 1470|Caenorhabditis elegans RA-GEF protein.
Length = 1470
Score = 65.3 bits (152), Expect = 8e-11
Identities = 36/109 (33%), Positives = 63/109 (57%), Gaps = 1/109 (0%)
Query: 241 SLHHIDTKC-TRNLEAYADWFNRLSYLVATDILKGVKSKYRARVIEQWVMTGRECFNLGN 299
+L +D+K + LE + FNR + VAT+I + RA++I++++ R C +L N
Sbjct: 921 NLFKLDSKYGSPKLEEFEQLFNREMWWVATEICTERHVQKRAKLIKKFIKVARYCRDLRN 980
Query: 300 FNSLMAIISALNMSPVMRLKKTWSRTSAVCGQQLRQLELCVEPTGNHAR 348
FNS+ AI+S L+ V RL +W R S+ + L ++ V+P+ N ++
Sbjct: 981 FNSMFAIMSGLDKPAVRRLHSSWERVSSKYIRMLDEIHQLVDPSRNMSK 1029
>U42834-3|AAA83583.2| 860|Caenorhabditis elegans Hypothetical
protein F28B4.2 protein.
Length = 860
Score = 60.1 bits (139), Expect = 3e-09
Identities = 33/90 (36%), Positives = 49/90 (54%), Gaps = 1/90 (1%)
Query: 253 LEAYADWFNRLSYLVATDI-LKGVKSKYRARVIEQWVMTGRECFNLGNFNSLMAIISALN 311
++A + FN +S V T I L + +YRA++I +W+ RE L NF+SL A++S+L
Sbjct: 276 VKATIEQFNSVSQRVMTSIVLPDCRPEYRAKIISKWIDIARELRALKNFSSLKAVLSSLQ 335
Query: 312 MSPVMRLKKTWSRTSAVCGQQLRQLELCVE 341
PV RLK W+ Q R+L E
Sbjct: 336 SEPVHRLKSAWNSVPNRSISQFRELSSIYE 365
>Z70752-4|CAA94755.3| 654|Caenorhabditis elegans Hypothetical
protein F25B3.3 protein.
Length = 654
Score = 48.0 bits (109), Expect = 1e-05
Identities = 28/84 (33%), Positives = 43/84 (51%)
Query: 253 LEAYADWFNRLSYLVATDILKGVKSKYRARVIEQWVMTGRECFNLGNFNSLMAIISALNM 312
LE FN LS V IL K RA ++ ++V + + NFN+LM+++ +
Sbjct: 193 LERSISVFNNLSNWVQCMILNKTTPKERAEILVKFVHVAKHLRKINNFNTLMSVVGGITH 252
Query: 313 SPVMRLKKTWSRTSAVCGQQLRQL 336
S V RL KT++ S ++L QL
Sbjct: 253 SSVARLAKTYAVLSNDIKKELTQL 276
>AC024755-7|AAO91688.1| 833|Caenorhabditis elegans Hypothetical
protein Y34B4A.4b protein.
Length = 833
Score = 46.8 bits (106), Expect = 3e-05
Identities = 27/77 (35%), Positives = 45/77 (58%), Gaps = 2/77 (2%)
Query: 248 KCTRNLEAYADWFNRLSYLVATDILKGVKSKYRARVIEQWVMTGRECFNLGNFNSLMAII 307
K ++NL + + FN LS+ V T I+ K R R + ++V + + NFNS +AI+
Sbjct: 671 KKSKNLVNFTEQFNNLSFWVRTLIITQGTQKERERHMMKFVKIMKHLREMCNFNSYLAIL 730
Query: 308 SALNMSPVMRLKKTWSR 324
SA+ +P+ RL+ WS+
Sbjct: 731 SAIMSTPLARLE--WSK 745
>AC024755-6|AAF59639.1| 877|Caenorhabditis elegans Hypothetical
protein Y34B4A.4a protein.
Length = 877
Score = 46.8 bits (106), Expect = 3e-05
Identities = 27/77 (35%), Positives = 45/77 (58%), Gaps = 2/77 (2%)
Query: 248 KCTRNLEAYADWFNRLSYLVATDILKGVKSKYRARVIEQWVMTGRECFNLGNFNSLMAII 307
K ++NL + + FN LS+ V T I+ K R R + ++V + + NFNS +AI+
Sbjct: 671 KKSKNLVNFTEQFNNLSFWVRTLIITQGTQKERERHMMKFVKIMKHLREMCNFNSYLAIL 730
Query: 308 SALNMSPVMRLKKTWSR 324
SA+ +P+ RL+ WS+
Sbjct: 731 SAIMSTPLARLE--WSK 745
>Z30423-4|CAA83013.2| 1234|Caenorhabditis elegans Hypothetical protein
T20G5.5 protein.
Length = 1234
Score = 38.3 bits (85), Expect = 0.010
Identities = 22/95 (23%), Positives = 44/95 (46%), Gaps = 1/95 (1%)
Query: 252 NLEAYADWFNRLSYLVATDILKGVKSKYRARVIEQWVMTGRECFNLGNFNSLMAIISALN 311
NL+ FN + + T+IL + R ++++++ + ++ AI L+
Sbjct: 1032 NLDLLVRRFNEVQHWSTTEILLATEEN-RMEILKKFISIATIAREYRDLLTVFAITLGLS 1090
Query: 312 MSPVMRLKKTWSRTSAVCGQQLRQLELCVEPTGNH 346
+ + RL TWS+ + +LE ++PT NH
Sbjct: 1091 HTSISRLTLTWSKLPPASLKTFSELENLLDPTRNH 1125
>AF251308-1|AAF82360.1| 1413|Caenorhabditis elegans guanine nucleotide
exchange factorfor RAS protein.
Length = 1413
Score = 33.9 bits (74), Expect = 0.23
Identities = 43/134 (32%), Positives = 61/134 (45%), Gaps = 18/134 (13%)
Query: 189 DILTLGLTPVELANQLTIVELHRLSFVGPEEFVQTFAPIHPPQSTSACKTSISLHHIDTK 248
D+LTL P+E+ QLT++ + P E V+ T A K S +
Sbjct: 892 DLLTLH--PIEIGRQLTLLHSDLYRAIQPIELVEA-------AWTKAEKWRKSPQLLRLT 942
Query: 249 CTRNLEAYADWFNRLSYLVATDILKGVKSKYRARVIEQWVMTGRECFNLGNFNSLMAIIS 308
L Y W +R +V T+ L+ + + RV+E VM+ E L NF L+A S
Sbjct: 943 DHSTLLTY--WVSRS--IVETESLEERMAMFN-RVLE--VMSVFE--ELHNFTGLVAFYS 993
Query: 309 ALNMSPVMRLKKTW 322
ALN S + RLK W
Sbjct: 994 ALNSSCIFRLKWCW 1007
>AC006692-9|AAF39972.5| 1493|Caenorhabditis elegans Drosophila sos
homolog protein 1 protein.
Length = 1493
Score = 33.9 bits (74), Expect = 0.23
Identities = 43/134 (32%), Positives = 61/134 (45%), Gaps = 18/134 (13%)
Query: 189 DILTLGLTPVELANQLTIVELHRLSFVGPEEFVQTFAPIHPPQSTSACKTSISLHHIDTK 248
D+LTL P+E+ QLT++ + P E V+ T A K S +
Sbjct: 892 DLLTLH--PIEIGRQLTLLHSDLYRAIQPIELVEA-------AWTKAEKWRKSPQLLRLT 942
Query: 249 CTRNLEAYADWFNRLSYLVATDILKGVKSKYRARVIEQWVMTGRECFNLGNFNSLMAIIS 308
L Y W +R +V T+ L+ + + RV+E VM+ E L NF L+A S
Sbjct: 943 DHSTLLTY--WVSRS--IVETESLEERMAMFN-RVLE--VMSVFE--ELHNFTGLVAFYS 993
Query: 309 ALNMSPVMRLKKTW 322
ALN S + RLK W
Sbjct: 994 ALNSSCIFRLKWCW 1007
>AL023839-2|CAA19508.1| 1066|Caenorhabditis elegans Hypothetical
protein Y39A1C.2 protein.
Length = 1066
Score = 32.3 bits (70), Expect = 0.69
Identities = 19/67 (28%), Positives = 36/67 (53%), Gaps = 4/67 (5%)
Query: 151 EMSTTLEKLLDKLTALEQYEESLVDITQVSSLDQLSQGDILTLGLTP----VELANQLTI 206
E+S +L LT +++YE + D++ S+D+ G I T+ L P + + N+ I
Sbjct: 816 ELSQLDPELYRSLTFVKRYEGEMADLSLTFSVDEDFMGKISTVDLVPSGRTISVTNENKI 875
Query: 207 VELHRLS 213
+HR++
Sbjct: 876 DYVHRMA 882
>AB006659-1|BAA21847.1| 655|Caenorhabditis elegans E6-AP
ubiquitin-protein ligase protein.
Length = 655
Score = 32.3 bits (70), Expect = 0.69
Identities = 19/67 (28%), Positives = 36/67 (53%), Gaps = 4/67 (5%)
Query: 151 EMSTTLEKLLDKLTALEQYEESLVDITQVSSLDQLSQGDILTLGLTP----VELANQLTI 206
E+S +L LT +++YE + D++ S+D+ G I T+ L P + + N+ I
Sbjct: 404 ELSQLDPELYRSLTFVKRYEGEMADLSLTFSVDEDFMGKISTVDLVPSGRTISVTNENKI 463
Query: 207 VELHRLS 213
+HR++
Sbjct: 464 DYVHRMA 470
>Z83103-3|CAB05473.1| 376|Caenorhabditis elegans Hypothetical
protein D1025.3 protein.
Length = 376
Score = 31.1 bits (67), Expect = 1.6
Identities = 25/111 (22%), Positives = 52/111 (46%), Gaps = 7/111 (6%)
Query: 143 EHMESVRVEMSTTLEKLLDKLTALEQYEES----LVDITQVSSLDQLSQGDILTLGLTPV 198
EH+ +R++ + ++ L++ A++Q++ + L D+ + S+ Q S + +T +
Sbjct: 208 EHLNHIRIKNTNFNQEQLEQFVAMDQWKHAKSMFLEDLNDI-SVAQFSHFETFWTNVTRL 266
Query: 199 ELANQLTIVE--LHRLSFVGPEEFVQTFAPIHPPQSTSACKTSISLHHIDT 247
E + +++ + R S G V T PI P Q + + IDT
Sbjct: 267 EPVDAWNVIKSYIKRNSPRGAFFHVGTANPIEPSQISDLFDVEVKNEPIDT 317
>Z71266-4|CAA95843.1| 478|Caenorhabditis elegans Hypothetical
protein R06C7.5a protein.
Length = 478
Score = 29.9 bits (64), Expect = 3.7
Identities = 28/111 (25%), Positives = 49/111 (44%), Gaps = 7/111 (6%)
Query: 59 TVLTPGVKAIPNHPYTNCTTEKSDIEYRDGQIGKAEVKDLVEK---ELNDMIALVRVLRQ 115
+V T VK I EK+ + + + + + ++ K E + A +V +
Sbjct: 359 SVQTDNVKKIVEDEIAFLGLEKAMMMLTEEGVDRQQAHAVIRKTALEAKQLQATQKVDIR 418
Query: 116 WTSMFPY-DFRDDRVMALVRS---ITQRCAAEHMESVRVEMSTTLEKLLDK 162
T P+ D DRV+ LV + T RC ++ + E+ T++K LDK
Sbjct: 419 QTMADPFFDSVRDRVVGLVNNPINFTGRCVSQTESFIAKELKPTIDKYLDK 469
>AL132898-19|CAC14411.2| 417|Caenorhabditis elegans Hypothetical
protein Y59A8B.13 protein.
Length = 417
Score = 29.9 bits (64), Expect = 3.7
Identities = 25/79 (31%), Positives = 40/79 (50%), Gaps = 9/79 (11%)
Query: 35 SNHASLTSDPTLLHGTGLSYYDLSTVLTPGVKAIPN-----HPYTNCTTEKSDIEYRD-G 88
S+HA+ +S T LH T S L T T V+ +P +P C ++ D + G
Sbjct: 298 SSHAT-SSSVTSLHNTSTS--SLMTSSTTYVEPLPQTYSEINPEFECEADEDDDYLMEAG 354
Query: 89 QIGKAEVKDLVEKELNDMI 107
+ G+AE ++ E+ ND+I
Sbjct: 355 EAGEAEAEEEEEEAENDVI 373
>AL110500-7|CAB54490.1| 489|Caenorhabditis elegans Hypothetical
protein Y87G2A.7 protein.
Length = 489
Score = 29.1 bits (62), Expect = 6.4
Identities = 13/40 (32%), Positives = 25/40 (62%)
Query: 72 PYTNCTTEKSDIEYRDGQIGKAEVKDLVEKELNDMIALVR 111
P T+ + +SD +Y DG+ E ++KEL+ ++AL++
Sbjct: 53 PATHQESSESDSDYSDGEEATPEQWKELDKELDKVVALLK 92
>AL132860-15|CAB60497.1| 619|Caenorhabditis elegans Hypothetical
protein Y56A3A.16 protein.
Length = 619
Score = 28.7 bits (61), Expect = 8.5
Identities = 25/88 (28%), Positives = 40/88 (45%), Gaps = 14/88 (15%)
Query: 234 SACKTSISLHHIDTK--CTRNLEAYADWFNRLSYLVATDILKGVKSKYRARVIEQWVMTG 291
+AC+ S+ H+I+ + C R + Y +F L + G KS ARV+ QW T
Sbjct: 346 AACRQSLHTHNINDREQCPRFCDYYGLFFCSLCH-------GGEKSILPARVLNQWSFT- 397
Query: 292 RECFNLGNFNSLMAIISALNMSPVMRLK 319
L + + A+ SPV R++
Sbjct: 398 ----ELPVSDRAQRFLRAVRESPVFRIR 421
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.318 0.131 0.383
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,650,215
Number of Sequences: 27539
Number of extensions: 355975
Number of successful extensions: 975
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 942
Number of HSP's gapped (non-prelim): 37
length of query: 433
length of database: 12,573,161
effective HSP length: 83
effective length of query: 350
effective length of database: 10,287,424
effective search space: 3600598400
effective search space used: 3600598400
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 61 (28.7 bits)
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