Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000535-TA|BGIBMGA000535-PA|IPR008937|Ras guanine
nucleotide exchange factor, IPR001895|Guanine-nucleotide dissociation
stimulator CDC25
(433 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC1442.01 |ste6|SPCC1450.17|guanyl-nucleotide exchange factor ... 57 6e-09
SPBC336.03 |efc25||exchange factor Cdc25p-like|Schizosaccharomyc... 54 3e-08
SPAC23G3.02c |sib1||ferrichrome synthetase Sib1|Schizosaccharomy... 32 0.14
SPBC16C6.09 |ogm4|oma4|protein O-mannosyltransferase Ogm4|Schizo... 31 0.42
SPAC25B8.08 |||conserved fungal family|Schizosaccharomyces pombe... 31 0.42
SPBC1718.06 |msp1|mgm1|mitochondrial GTPase Msp1|Schizosaccharom... 29 1.7
SPAC9G1.13c |||histone acetyltransferase complex subunit Swc4 |S... 28 2.2
SPBC12C2.05c |||diacylglycerol binding protein Bzz1 |Schizosacch... 28 2.9
SPAC26A3.16 |dph1|ucp5|UBA domain protein Dph1|Schizosaccharomyc... 27 3.9
SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces... 27 5.1
SPAC3G9.11c |||pyruvate decarboxylase |Schizosaccharomyces pombe... 27 5.1
SPBC1703.03c |||armadillo repeat protein, unknown biological rol... 27 5.1
SPBC725.09c |hob3||BAR adaptor protein Hob3|Schizosaccharomyces ... 27 6.8
SPBC887.03c |noc3||Noc2p-Noc3p complex subunit Noc3 |Schizosacch... 27 6.8
SPAC3C7.12 |tip1|noc1|CLIP170 family protein Tip1|Schizosaccharo... 26 8.9
>SPCC1442.01 |ste6|SPCC1450.17|guanyl-nucleotide exchange factor
Ste6|Schizosaccharomyces pombe|chr 3|||Manual
Length = 911
Score = 56.8 bits (131), Expect = 6e-09
Identities = 54/200 (27%), Positives = 85/200 (42%), Gaps = 20/200 (10%)
Query: 162 KLTALEQYEESLVDITQVSSLDQLSQGDILTLGLTPVELANQLTIVELHRLSFVGPEEFV 221
K+ ++ + L D++ +S D + D L L L P E+A QL I+E S + +F+
Sbjct: 629 KMLEGKELSQELEDLSLHNSPDPIIYKDELVLLLPPREIAKQLCILEFQSFSHISRIQFL 688
Query: 222 QTFAPIHPPQSTSACKTSISLHHIDTKCTRNLEAYADWFNRLSYLVATDILKGVKSKYRA 281
I + + K S ++ N L V I++ + + R
Sbjct: 689 ---TKIWDNLNRFSPKEKTSTFYLS--------------NHLVNFVTETIVQEEEPRRRT 731
Query: 282 RVIEQWVMTGRECFNLGNFNSLMAIISALNMSPVMRLKKTWSRTSAVCGQQLRQLELCVE 341
V+ ++ L NF SL +IISALN SP+ RL+KTW+ ++ + L EL
Sbjct: 732 NVLAYFIQVCDYLRELNNFASLFSIISALNSSPIHRLRKTWANLNS---KTLASFELLNN 788
Query: 342 PTGNHARLSGNRVNFEKCAL 361
T S R E C L
Sbjct: 789 LTEARKNFSNYRDCLENCVL 808
>SPBC336.03 |efc25||exchange factor Cdc25p-like|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 987
Score = 54.4 bits (125), Expect = 3e-08
Identities = 28/84 (33%), Positives = 48/84 (57%), Gaps = 3/84 (3%)
Query: 256 YADWFNRLSYLVATDILKGVKSKYRARVIEQWVMTGRECFNLGNFNSLMAIISALNMSPV 315
Y ++ N +Y + IL+ +K R VI ++ T +C +L NF++LM+I+SALN +P+
Sbjct: 793 YINFSNCFTYWIINCILEKKNTKARTAVISFFIQTAYKCLSLQNFSTLMSIVSALNSAPI 852
Query: 316 MRLKKTWSRTSA---VCGQQLRQL 336
RL + A +C LR++
Sbjct: 853 YRLHAAYKLVKAEDIICLSGLREI 876
>SPAC23G3.02c |sib1||ferrichrome synthetase Sib1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 4924
Score = 32.3 bits (70), Expect = 0.14
Identities = 38/132 (28%), Positives = 58/132 (43%), Gaps = 14/132 (10%)
Query: 202 NQLTIVELHRLSFVG--PEEFVQTFAPIHPPQSTSACKTSISLHHIDTKC-----TRNLE 254
N+ +E+ F+G P +F + I+P Q T C SISL ID C T +
Sbjct: 1491 NKNVDLEIWSKIFLGFKPSKFPELCKDINPEQRTYKCNLSISLSQIDDLCNGFSFTTSTF 1550
Query: 255 AYADWFNRLSYLV-ATDILKGVKSKYRARVIEQWVMTGRECFNLGNFNSLMAIISALNMS 313
W LS+L+ + DI G R +++ V FN +F + + S L+ +
Sbjct: 1551 LQCCWAKTLSFLLNSRDICFGNIISGRDVPVDEVVSLVAPTFN--SFPLRVLLDSKLSFA 1608
Query: 314 PV----MRLKKT 321
V RLK+T
Sbjct: 1609 EVCGQLQRLKET 1620
>SPBC16C6.09 |ogm4|oma4|protein O-mannosyltransferase
Ogm4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 778
Score = 30.7 bits (66), Expect = 0.42
Identities = 19/53 (35%), Positives = 29/53 (54%), Gaps = 7/53 (13%)
Query: 39 SLTSDPTLLHGTGLSYYDLSTVLTPGVKA-IPNHPYTNCTTEKSDIEYRDGQI 90
+L+ +P + T L+YYD+ T+ G A + +HP EK I Y DG+I
Sbjct: 326 TLSDNPITANSTILNYYDIVTIKHMGTNAFLHSHP------EKYPIPYDDGRI 372
>SPAC25B8.08 |||conserved fungal family|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 590
Score = 30.7 bits (66), Expect = 0.42
Identities = 23/92 (25%), Positives = 45/92 (48%), Gaps = 6/92 (6%)
Query: 94 EVKDLVEKELNDMIALVRVLRQWTSMFPYDFRDDRVMALVRSITQRCAAEHMESVRVEMS 153
EV + ++ NDM+ V+ L + + Y +D+++ L I RC +E M S+ +
Sbjct: 202 EVNQVTQQHPNDMVLCVQWLANVSLLLFYLKKDNKLDDLTVDIQNRC-SELMNSLYI--- 257
Query: 154 TTLEKLLDKLTALEQYEESLVDITQVSSLDQL 185
T + + ++ E EE +V T + L+ +
Sbjct: 258 TICQDAMRRMN--ENLEEGMVKYTGIQGLEDI 287
>SPBC1718.06 |msp1|mgm1|mitochondrial GTPase
Msp1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 903
Score = 28.7 bits (61), Expect = 1.7
Identities = 11/29 (37%), Positives = 19/29 (65%)
Query: 89 QIGKAEVKDLVEKELNDMIALVRVLRQWT 117
+ GK+EV+DL++ LN+ + + R WT
Sbjct: 580 KFGKSEVRDLLKSSLNEKVMDLLAERYWT 608
>SPAC9G1.13c |||histone acetyltransferase complex subunit Swc4
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 411
Score = 28.3 bits (60), Expect = 2.2
Identities = 13/33 (39%), Positives = 17/33 (51%)
Query: 227 IHPPQSTSACKTSISLHHIDTKCTRNLEAYADW 259
+ P S S+ K +LHH K + EAY DW
Sbjct: 70 VRQPFSISSRKDDFTLHHWVLKSEVDSEAYEDW 102
>SPBC12C2.05c |||diacylglycerol binding protein Bzz1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 642
Score = 27.9 bits (59), Expect = 2.9
Identities = 20/59 (33%), Positives = 28/59 (47%), Gaps = 2/59 (3%)
Query: 165 ALEQYEESLVDITQVSSLDQLSQGDILTLGLTPVELANQLTIVELHRLSFVGPEEFVQT 223
A E Y + D SS+ Q S ++ T TP E A+++ V L+ F G E V T
Sbjct: 479 AYESYRNTYTDDMDSSSIYQTSLSNVKTEETTPAEPASKVDGVVLY--DFTGEHEGVIT 535
>SPAC26A3.16 |dph1|ucp5|UBA domain protein Dph1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 354
Score = 27.5 bits (58), Expect = 3.9
Identities = 18/50 (36%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Query: 93 AEVKDLVEKELNDMIALVRVLRQWTSMFPYDFRDDRVMALVRSITQRCAA 142
A V D +EKE +I RVL+ S+ Y +D + LV+++ Q AA
Sbjct: 34 APVAD-IEKERQRLIYAGRVLKDEESLKTYKIQDGHSIHLVKTLGQNPAA 82
>SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1727
Score = 27.1 bits (57), Expect = 5.1
Identities = 29/94 (30%), Positives = 48/94 (51%), Gaps = 8/94 (8%)
Query: 93 AEVKDLVEKELNDMIALVRVLRQWTSMFPYDFRD-DRVMA---LVRSITQRCAAEHMESV 148
+E + L+E L+D+ + L S + Y R+ +++ A L + +R E+ E
Sbjct: 911 SEREALLESSLSDLQSKHTSLE---SQYNYSLRNIEQLQAASKLAEEMVERVKTEYDE-Y 966
Query: 149 RVEMSTTLEKLLDKLTALEQYEESLVDITQVSSL 182
R++ S +LEK K+T+LEQ L D SSL
Sbjct: 967 RLQTSESLEKNHLKITSLEQRIVILQDEIASSSL 1000
>SPAC3G9.11c |||pyruvate decarboxylase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 570
Score = 27.1 bits (57), Expect = 5.1
Identities = 21/61 (34%), Positives = 32/61 (52%), Gaps = 7/61 (11%)
Query: 46 LLHGTGLSYYDLSTV-----LTPGVKAIPNHPYTNCTTEKSDIE-YRDGQIGKAEVKDLV 99
L+HG Y D++T L G A + Y N +EK ++ ++D + GKA+V LV
Sbjct: 486 LIHGLHAVYNDINTEWDYQNLLKGYGAKNSRSY-NIHSEKELLDLFKDEEFGKADVIQLV 544
Query: 100 E 100
E
Sbjct: 545 E 545
>SPBC1703.03c |||armadillo repeat protein, unknown biological
role|Schizosaccharomyces pombe|chr 2|||Manual
Length = 664
Score = 27.1 bits (57), Expect = 5.1
Identities = 12/35 (34%), Positives = 22/35 (62%)
Query: 152 MSTTLEKLLDKLTALEQYEESLVDITQVSSLDQLS 186
M++ L+ L D LE+ E+SL++ +S +D +S
Sbjct: 346 MTSLLQSLADGTDELEEQEDSLMEDEDLSYMDDMS 380
>SPBC725.09c |hob3||BAR adaptor protein Hob3|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 264
Score = 26.6 bits (56), Expect = 6.8
Identities = 17/58 (29%), Positives = 27/58 (46%)
Query: 58 STVLTPGVKAIPNHPYTNCTTEKSDIEYRDGQIGKAEVKDLVEKELNDMIALVRVLRQ 115
+TVL P + P N K + + D +A+V+ LV+K ND L R ++
Sbjct: 112 TTVLDPISRFCSYFPDINAAITKRNHKLLDHDAMRAKVQKLVDKPSNDTTKLPRTEKE 169
>SPBC887.03c |noc3||Noc2p-Noc3p complex subunit Noc3
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 747
Score = 26.6 bits (56), Expect = 6.8
Identities = 15/50 (30%), Positives = 24/50 (48%)
Query: 219 EFVQTFAPIHPPQSTSACKTSISLHHIDTKCTRNLEAYADWFNRLSYLVA 268
+F+QT I S++ +T +SL+ + +C L A FN L A
Sbjct: 309 KFLQTLETILKSFSSTLDETQLSLYQVAVRCCTKLIEQASHFNLSEKLFA 358
>SPAC3C7.12 |tip1|noc1|CLIP170 family protein
Tip1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 461
Score = 26.2 bits (55), Expect = 8.9
Identities = 15/40 (37%), Positives = 20/40 (50%)
Query: 170 EESLVDITQVSSLDQLSQGDILTLGLTPVELANQLTIVEL 209
+ S+ +T VSS LS I + LTP E Q I +L
Sbjct: 106 QSSIPRLTNVSSSSNLSMNTISSTALTPTEKILQKRIEDL 145
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.131 0.383
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,776,501
Number of Sequences: 5004
Number of extensions: 65513
Number of successful extensions: 176
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 164
Number of HSP's gapped (non-prelim): 17
length of query: 433
length of database: 2,362,478
effective HSP length: 75
effective length of query: 358
effective length of database: 1,987,178
effective search space: 711409724
effective search space used: 711409724
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 55 (26.2 bits)
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