GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000535-TA|BGIBMGA000535-PA|IPR008937|Ras guanine
nucleotide exchange factor, IPR001895|Guanine-nucleotide dissociation
stimulator CDC25
         (433 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.            29   0.33 
CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transpos...    25   5.3  
AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcript...    25   5.3  
AY578798-1|AAT07303.1|  356|Anopheles gambiae baboon protein.          24   7.0  
AJ439060-1|CAD27752.1|  763|Anopheles gambiae hypothetical prote...    24   9.3  
AJ438610-9|CAD27481.1|  763|Anopheles gambiae hypothetical prote...    24   9.3  

>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
          Length = 3398

 Score = 28.7 bits (61), Expect = 0.33
 Identities = 17/57 (29%), Positives = 29/57 (50%), Gaps = 3/57 (5%)

Query: 80  KSDIEYRDGQIGKAEVKDLVEKELNDMIALVRVLRQWTSMFPYDFRDDRVMALVRSI 136
           +S +EY D QI +   ++ V  +LN  I        +T +   +F DDRV   +R++
Sbjct: 676 ESMLEYSDVQIDRTRFEEAVPVDLNPTIYYG---PDYTVILDKEFEDDRVAITIRNL 729


>CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transposon
            polyprotein protein.
          Length = 1726

 Score = 24.6 bits (51), Expect = 5.3
 Identities = 13/37 (35%), Positives = 22/37 (59%), Gaps = 1/37 (2%)

Query: 49   GTG-LSYYDLSTVLTPGVKAIPNHPYTNCTTEKSDIE 84
            GTG L++ DLST+L      + + P T  + + +D+E
Sbjct: 1562 GTGHLTFEDLSTLLAEIEACLNSRPITAISEDPNDME 1598


>AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1099

 Score = 24.6 bits (51), Expect = 5.3
 Identities = 12/35 (34%), Positives = 18/35 (51%)

Query: 253 LEAYADWFNRLSYLVATDILKGVKSKYRARVIEQW 287
           L+  A  + RLS +  TD    ++ + R   IEQW
Sbjct: 843 LDEDARVYQRLSAVNRTDTRANIRKQERQATIEQW 877


>AY578798-1|AAT07303.1|  356|Anopheles gambiae baboon protein.
          Length = 356

 Score = 24.2 bits (50), Expect = 7.0
 Identities = 20/78 (25%), Positives = 36/78 (46%), Gaps = 3/78 (3%)

Query: 132 LVRSITQRCAAEHMESVRVEMST-TLEKLLDKLTALEQY--EESLVDITQVSSLDQLSQG 188
           LV+S    C  +   +VR  ++T T+++        ++Y   E L +   VS  D   + 
Sbjct: 194 LVKSNLTCCIGDLGLAVRHIVATDTVDQPSTHRVGTKRYMAPEVLDETINVSQFDSFKRA 253

Query: 189 DILTLGLTPVELANQLTI 206
           D+  LGL   E+A +  +
Sbjct: 254 DVYALGLVLWEIARRCNV 271


>AJ439060-1|CAD27752.1|  763|Anopheles gambiae hypothetical protein
           protein.
          Length = 763

 Score = 23.8 bits (49), Expect = 9.3
 Identities = 11/24 (45%), Positives = 12/24 (50%)

Query: 212 LSFVGPEEFVQTFAPIHPPQSTSA 235
           LS  GP E      P+HPP  T A
Sbjct: 201 LSVHGPTELGVLVRPMHPPNVTCA 224


>AJ438610-9|CAD27481.1|  763|Anopheles gambiae hypothetical protein
           protein.
          Length = 763

 Score = 23.8 bits (49), Expect = 9.3
 Identities = 11/24 (45%), Positives = 12/24 (50%)

Query: 212 LSFVGPEEFVQTFAPIHPPQSTSA 235
           LS  GP E      P+HPP  T A
Sbjct: 201 LSVHGPTELGVLVRPMHPPNVTCA 224


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.318    0.131    0.383 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 404,588
Number of Sequences: 2123
Number of extensions: 15260
Number of successful extensions: 27
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 22
Number of HSP's gapped (non-prelim): 7
length of query: 433
length of database: 516,269
effective HSP length: 66
effective length of query: 367
effective length of database: 376,151
effective search space: 138047417
effective search space used: 138047417
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 49 (23.8 bits)