GeneModel BLAST Result against fruitfly

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000534-TA|BGIBMGA000534-PA|undefined
         (72 letters)

Database: fruitfly 
           52,641 sequences; 24,830,863 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT023944-1|ABB36448.1|  834|Drosophila melanogaster LD32364p pro...    93   4e-20
AE014298-2513|AAF48690.2|  834|Drosophila melanogaster CG8949-PA...    93   4e-20
AY069555-1|AAL39700.1|  639|Drosophila melanogaster LD28458p pro...    27   4.2  
AE014297-3277|AAF56101.2|  639|Drosophila melanogaster CG31365-P...    27   4.2  

>BT023944-1|ABB36448.1|  834|Drosophila melanogaster LD32364p
           protein.
          Length = 834

 Score = 93.1 bits (221), Expect = 4e-20
 Identities = 41/71 (57%), Positives = 53/71 (74%)

Query: 2   LTPSLVNYVRSDLTSHVTGWPADILEKQANKFTEEAYQLGCLQCTRVSSELKCARSLVRH 61
           ++P L  Y R+DL +HVT W A++LE+QA K  E+ +  G + CTR+ +ELKCARSLVR 
Sbjct: 739 ISPKLAKYFRADLIAHVTNWHAEVLERQAQKCCEDTHLFGDITCTRICAELKCARSLVRS 798

Query: 62  TEIQATLQEQK 72
           TEI ATLQEQK
Sbjct: 799 TEINATLQEQK 809


>AE014298-2513|AAF48690.2|  834|Drosophila melanogaster CG8949-PA
           protein.
          Length = 834

 Score = 93.1 bits (221), Expect = 4e-20
 Identities = 41/71 (57%), Positives = 53/71 (74%)

Query: 2   LTPSLVNYVRSDLTSHVTGWPADILEKQANKFTEEAYQLGCLQCTRVSSELKCARSLVRH 61
           ++P L  Y R+DL +HVT W A++LE+QA K  E+ +  G + CTR+ +ELKCARSLVR 
Sbjct: 739 ISPKLAKYFRADLIAHVTNWHAEVLERQAQKCCEDTHLFGDITCTRICAELKCARSLVRS 798

Query: 62  TEIQATLQEQK 72
           TEI ATLQEQK
Sbjct: 799 TEINATLQEQK 809


>AY069555-1|AAL39700.1|  639|Drosophila melanogaster LD28458p
           protein.
          Length = 639

 Score = 26.6 bits (56), Expect = 4.2
 Identities = 13/32 (40%), Positives = 17/32 (53%)

Query: 41  GCLQCTRVSSELKCARSLVRHTEIQATLQEQK 72
           G L+C   + +L CA SL RH  I   L+  K
Sbjct: 481 GTLKCPSCALQLSCASSLKRHMIIHTGLKPFK 512


>AE014297-3277|AAF56101.2|  639|Drosophila melanogaster CG31365-PA
           protein.
          Length = 639

 Score = 26.6 bits (56), Expect = 4.2
 Identities = 13/32 (40%), Positives = 17/32 (53%)

Query: 41  GCLQCTRVSSELKCARSLVRHTEIQATLQEQK 72
           G L+C   + +L CA SL RH  I   L+  K
Sbjct: 481 GTLKCPSCALQLSCASSLKRHMIIHTGLKPFK 512


  Database: fruitfly
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 24,830,863
  Number of sequences in database:  52,641
  
Lambda     K      H
   0.316    0.127    0.369 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,137,033
Number of Sequences: 52641
Number of extensions: 92650
Number of successful extensions: 326
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 322
Number of HSP's gapped (non-prelim): 4
length of query: 72
length of database: 24,830,863
effective HSP length: 52
effective length of query: 20
effective length of database: 22,093,531
effective search space: 441870620
effective search space used: 441870620
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 53 (25.4 bits)