GeneModel BLAST Result against uniref50

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000533-TA|BGIBMGA000533-PA|undefined
         (145 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI00006CCA30 Cluster: hypothetical protein TTHERM_0027...    36   0.45 
UniRef50_A0E9K6 Cluster: Chromosome undetermined scaffold_84, wh...    33   1.8  
UniRef50_Q7QH63 Cluster: ENSANGP00000004066; n=2; Culicidae|Rep:...    32   5.5  
UniRef50_A6REG9 Cluster: Cutinase transcription factor 1 alpha; ...    31   7.3  

>UniRef50_UPI00006CCA30 Cluster: hypothetical protein TTHERM_00279930;
            n=1; Tetrahymena thermophila SB210|Rep: hypothetical
            protein TTHERM_00279930 - Tetrahymena thermophila SB210
          Length = 1541

 Score = 35.5 bits (78), Expect = 0.45
 Identities = 15/47 (31%), Positives = 28/47 (59%)

Query: 93   RKSPKRREIETTNPLGVSTQIAFVHQKSALKIVREKEVIMSEMNQRK 139
            RKS + R+  T+N LG+ T ++F  + +++ I ++ E   S   QR+
Sbjct: 986  RKSREERKHSTSNVLGIPTNVSFTSRNNSMSINQQLEATFSNQQQRQ 1032


>UniRef50_A0E9K6 Cluster: Chromosome undetermined scaffold_84, whole
           genome shotgun sequence; n=1; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_84,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 176

 Score = 33.5 bits (73), Expect = 1.8
 Identities = 14/57 (24%), Positives = 30/57 (52%)

Query: 87  LEIPIFRKSPKRREIETTNPLGVSTQIAFVHQKSALKIVREKEVIMSEMNQRKKFEL 143
           LEIP+ R   K  +++T NP+ +   ++      A K+V  +    +++++  K +L
Sbjct: 51  LEIPVNRNKTKPYQLQTQNPINIIQAVSIYQSSQANKVVPNEHQCPNQIDELSKSQL 107


>UniRef50_Q7QH63 Cluster: ENSANGP00000004066; n=2; Culicidae|Rep:
           ENSANGP00000004066 - Anopheles gambiae str. PEST
          Length = 837

 Score = 31.9 bits (69), Expect = 5.5
 Identities = 18/53 (33%), Positives = 25/53 (47%), Gaps = 4/53 (7%)

Query: 90  PIFRKSPKRREIETTNPLGVSTQIAFVHQKSAL----KIVREKEVIMSEMNQR 138
           P+  +SP RR  +   P      I   HQ+SAL    ++V  K    SE N+R
Sbjct: 338 PLISRSPLRRRFDLAEPPSYVPNIQIAHQQSALPLQQRVVNAKAYEFSEDNER 390


>UniRef50_A6REG9 Cluster: Cutinase transcription factor 1 alpha;
           n=1; Ajellomyces capsulatus NAm1|Rep: Cutinase
           transcription factor 1 alpha - Ajellomyces capsulatus
           NAm1
          Length = 920

 Score = 31.5 bits (68), Expect = 7.3
 Identities = 21/74 (28%), Positives = 31/74 (41%)

Query: 47  HHFDHLMAMCPHMAITHIQASPVIVITTTVIWQMIEDMSHLEIPIFRKSPKRREIETTNP 106
           H  DH M     +A T  + +P +  TT+     +  M     P FR+    R  ET + 
Sbjct: 8   HRPDHAMTGAEDIATTSTKDAPSLPNTTSAPKPSVPSMQTPGHPSFRRQRASRACETCHA 67

Query: 107 LGVSTQIAFVHQKS 120
             V+T I  +H  S
Sbjct: 68  RKVATSIHDLHPTS 81


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.324    0.132    0.387 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 138,446,110
Number of Sequences: 1657284
Number of extensions: 4638673
Number of successful extensions: 13746
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 13743
Number of HSP's gapped (non-prelim): 4
length of query: 145
length of database: 575,637,011
effective HSP length: 93
effective length of query: 52
effective length of database: 421,509,599
effective search space: 21918499148
effective search space used: 21918499148
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.6 bits)
S2: 67 (31.1 bits)