Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000532-TA|BGIBMGA000532-PA|IPR001487|Bromodomain
(1994 letters)
Database: mosquito
2123 sequences; 516,269 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF378002-1|AAL16724.1| 336|Anopheles gambiae putative transposa... 28 2.8
DQ230894-1|ABD94313.1| 315|Anopheles gambiae zinc finger protei... 27 4.9
DQ230893-1|ABD94311.1| 315|Anopheles gambiae zinc finger protei... 27 4.9
AY785361-1|AAV52865.1| 960|Anopheles gambiae male-specific tran... 27 4.9
AY785360-1|AAV52864.1| 759|Anopheles gambiae male-specific tran... 27 4.9
AY725820-1|AAU50568.1| 593|Anopheles gambiae fruitless female-s... 27 4.9
AY578803-1|AAT07308.1| 474|Anopheles gambiae mothers against Dp... 27 6.5
AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein. 27 6.5
AF080564-1|AAC31944.1| 372|Anopheles gambiae Sex combs reduced ... 27 6.5
AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcript... 27 6.5
AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein. 26 8.6
AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p... 26 8.6
>AF378002-1|AAL16724.1| 336|Anopheles gambiae putative transposase
protein.
Length = 336
Score = 27.9 bits (59), Expect = 2.8
Identities = 22/68 (32%), Positives = 33/68 (48%), Gaps = 4/68 (5%)
Query: 852 SVSRKEVTRKRPSSREPKLVKR-REIQRTIERLQPGKSKGNLLTNIPSKVEKAEETISTG 910
S SR K P + +++KR +EI TI + Q + G + N+ SK+ K TI
Sbjct: 20 SASRLAKKLKFPRNTVWRVIKRYKEILTTIRKPQANRRSGTVDQNLRSKILK---TIKGN 76
Query: 911 PLTKAREL 918
P R+L
Sbjct: 77 PNLSDRDL 84
>DQ230894-1|ABD94313.1| 315|Anopheles gambiae zinc finger protein 183
protein.
Length = 315
Score = 27.1 bits (57), Expect = 4.9
Identities = 21/80 (26%), Positives = 36/80 (45%), Gaps = 14/80 (17%)
Query: 996 DAEVETEPTTIVKPNQEKATPNLSAWFKAFGAPKSTPPSHASLKKKNEETDAEEKHESTN 1055
+AE E+ +V+ ++KA PN+ + + A KK+ ++A+ H S
Sbjct: 25 EAEEESSSVVVVQDRRKKANPNVQS-------------TSALRKKQARSSNADSSHSSEE 71
Query: 1056 SENKPLSPKHGTKYDSPVGP 1075
E+ LS K + P GP
Sbjct: 72 EESAGLSYK-SKRSAQPEGP 90
>DQ230893-1|ABD94311.1| 315|Anopheles gambiae zinc finger protein 183
protein.
Length = 315
Score = 27.1 bits (57), Expect = 4.9
Identities = 21/80 (26%), Positives = 36/80 (45%), Gaps = 14/80 (17%)
Query: 996 DAEVETEPTTIVKPNQEKATPNLSAWFKAFGAPKSTPPSHASLKKKNEETDAEEKHESTN 1055
+AE E+ +V+ ++KA PN+ + + A KK+ ++A+ H S
Sbjct: 25 EAEEESSSVVVVQDRRKKANPNVQS-------------TSALRKKQARSSNADSSHSSEE 71
Query: 1056 SENKPLSPKHGTKYDSPVGP 1075
E+ LS K + P GP
Sbjct: 72 EESAGLSYK-SKRSAQPEGP 90
>AY785361-1|AAV52865.1| 960|Anopheles gambiae male-specific
transcription factor FRU-MA protein.
Length = 960
Score = 27.1 bits (57), Expect = 4.9
Identities = 15/56 (26%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Query: 1628 YNTTRNSVQRTE-LQQNHSSELRIPNPRGVLKNDHLNMSSSINENDITAKNIENHA 1682
Y+ +S R+E ++ + +PN N++ N SS+ N N I++ N N++
Sbjct: 169 YSADTDSKLRSERIRDSRDERDSLPNASSNNSNNNNNSSSNNNNNTISSNNNNNNS 224
>AY785360-1|AAV52864.1| 759|Anopheles gambiae male-specific
transcription factor FRU-MB protein.
Length = 759
Score = 27.1 bits (57), Expect = 4.9
Identities = 15/56 (26%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Query: 1628 YNTTRNSVQRTE-LQQNHSSELRIPNPRGVLKNDHLNMSSSINENDITAKNIENHA 1682
Y+ +S R+E ++ + +PN N++ N SS+ N N I++ N N++
Sbjct: 169 YSADTDSKLRSERIRDSRDERDSLPNASSNNSNNNNNSSSNNNNNTISSNNNNNNS 224
>AY725820-1|AAU50568.1| 593|Anopheles gambiae fruitless
female-specific zinc-fingerC isoform protein.
Length = 593
Score = 27.1 bits (57), Expect = 4.9
Identities = 15/56 (26%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Query: 1628 YNTTRNSVQRTE-LQQNHSSELRIPNPRGVLKNDHLNMSSSINENDITAKNIENHA 1682
Y+ +S R+E ++ + +PN N++ N SS+ N N I++ N N++
Sbjct: 121 YSADTDSKLRSERIRDSRDERDSLPNASSNNSNNNNNSSSNNNNNTISSNNNNNNS 176
>AY578803-1|AAT07308.1| 474|Anopheles gambiae mothers against Dpp
protein.
Length = 474
Score = 26.6 bits (56), Expect = 6.5
Identities = 14/47 (29%), Positives = 24/47 (51%), Gaps = 3/47 (6%)
Query: 1176 GPQSPYSTYAQHVYASNNVTGSTTPHYFIDHTKSPLPAYNHNPPPFY 1222
GP SP S+ H+ ++ ++ ++P + +SP A PPP Y
Sbjct: 199 GPNSPISS---HMGPNSPMSSVSSPGPISSNPQSPYGALPETPPPAY 242
>AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.
Length = 1133
Score = 26.6 bits (56), Expect = 6.5
Identities = 42/192 (21%), Positives = 81/192 (42%), Gaps = 15/192 (7%)
Query: 830 QTVSTEEQDSRLDDELSQGEKSSVSRKEVTRKRPSSREPKLVKRREIQRTIERLQPG-KS 888
+ V EE+ S L+ GE S + ++ + +E +L + +++L+ +
Sbjct: 288 EIVVLEEKQSNLESAGRMGELLSELQAKLAWRNVIDQEEQLAA---VDDELKKLRTSIEE 344
Query: 889 KGNLLTNIPSKVEKAEETISTGPLTKARELNKTEETSSPKLSLGSVLPTVEFTIGNDHNF 948
+ + + N + V K + TI T +A +K +E + K + G+V T++ +
Sbjct: 345 QEHRIRNREALVAKTDSTIDT---YRADIESKKQEYVALKEAYGTVRRTLQ-------DV 394
Query: 949 GNKDEVPEEDQNNMSKPQELSSQKDDITEETSNEKATETVVIQTSKKDAEVETEPTTIVK 1008
K E N S+ + QKD E ++ + Q ++ VETE + +
Sbjct: 395 QAKQAAIERGMRNASE-RVTRIQKDARQIEQDLQERNRDGLSQVEQRKQAVETEKAQLKE 453
Query: 1009 PNQEKATPNLSA 1020
N E A+ SA
Sbjct: 454 RNDELASMIASA 465
>AF080564-1|AAC31944.1| 372|Anopheles gambiae Sex combs reduced
homeotic protein protein.
Length = 372
Score = 26.6 bits (56), Expect = 6.5
Identities = 29/103 (28%), Positives = 46/103 (44%), Gaps = 14/103 (13%)
Query: 886 GKSKG-NLLTNIPSKVEKAEETIST--GPLTKARELNKTEETSSPKLSLGSVLPTVEFTI 942
G S G N++ N + + + +ST G + A + N SPKLS GSV+ +V ++
Sbjct: 132 GPSTGTNVINNNNNNSTTSPQDLSTASGGSSGANDGNNGRPEISPKLSPGSVVESVSRSL 191
Query: 943 --GN-------DHNFGNKDEVPEEDQNN--MSKPQELSSQKDD 974
GN N + +Q N ++ P+E S DD
Sbjct: 192 KSGNPSTAVSSSSTNNNTSNISNRNQVNLPLASPEEESEASDD 234
>AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcriptase
protein.
Length = 1173
Score = 26.6 bits (56), Expect = 6.5
Identities = 12/43 (27%), Positives = 19/43 (44%)
Query: 1611 NTSINYSKNTQNHQYTAYNTTRNSVQRTELQQNHSSELRIPNP 1653
N + + + + YN TRN+ +R QQ + L P P
Sbjct: 1041 NAQLRNADVLRQERLRRYNETRNAARRAATQQRQAERLPPPPP 1083
>AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.
Length = 1229
Score = 26.2 bits (55), Expect = 8.6
Identities = 18/65 (27%), Positives = 31/65 (47%), Gaps = 6/65 (9%)
Query: 684 YDKIKERRRNAA-----KDAFESLLDYKQKSTDKQKQNINLPEKDKNQKLTETIEKLKAK 738
Y K++ +N + K + +SL Q D ++ I P QKL EK+++
Sbjct: 983 YSKLEHHLKNLSDPDQIKKSGDSLAKELQSKLDTLEK-IQTPNMKAMQKLDRVTEKIQST 1041
Query: 739 NEKFK 743
NE+F+
Sbjct: 1042 NEEFE 1046
>AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein
protein.
Length = 3325
Score = 26.2 bits (55), Expect = 8.6
Identities = 14/40 (35%), Positives = 18/40 (45%)
Query: 814 DAPKSSTVSSPCDSPAQTVSTEEQDSRLDDELSQGEKSSV 853
D + T S P + STE + D +LSQG K V
Sbjct: 338 DFDRIDTYSQKDSKPKTSSSTERESFDTDPKLSQGHKCDV 377
Database: mosquito
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 516,269
Number of sequences in database: 2123
Lambda K H
0.308 0.125 0.351
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,779,915
Number of Sequences: 2123
Number of extensions: 71839
Number of successful extensions: 193
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 173
Number of HSP's gapped (non-prelim): 30
length of query: 1994
length of database: 516,269
effective HSP length: 75
effective length of query: 1919
effective length of database: 357,044
effective search space: 685167436
effective search space used: 685167436
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.7 bits)
S2: 55 (26.2 bits)
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