GeneModel BLAST Result against uniref50

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000531-TA|BGIBMGA000531-PA|IPR009635|Neural
proliferation differentiation control-1
         (57 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI00015B5224 Cluster: PREDICTED: similar to npdc-1; n=...    87   7e-17
UniRef50_Q9W0Z5 Cluster: CG30420-PA, isoform A; n=8; Endopterygo...    80   1e-14
UniRef50_Q16MY4 Cluster: Npdc-1; n=1; Aedes aegypti|Rep: Npdc-1 ...    76   2e-13
UniRef50_UPI0000F1E120 Cluster: PREDICTED: similar to LOC446973 ...    66   2e-10
UniRef50_UPI0000F20B21 Cluster: PREDICTED: similar to LOC446973 ...    64   4e-10
UniRef50_UPI0000ECA4B8 Cluster: Neural proliferation differentia...    64   4e-10
UniRef50_Q9NQX5 Cluster: Neural proliferation differentiation an...    64   4e-10
UniRef50_A7SIF2 Cluster: Predicted protein; n=1; Nematostella ve...    60   6e-09
UniRef50_Q640V7 Cluster: LOC446973 protein; n=1; Xenopus laevis|...    60   1e-08
UniRef50_Q3KTI9 Cluster: SJCHGC06411 protein; n=1; Schistosoma j...    51   4e-06
UniRef50_Q93249 Cluster: Protein cab-1; n=2; Caenorhabditis|Rep:...    47   6e-05
UniRef50_Q4T8E9 Cluster: Chromosome undetermined SCAF7817, whole...    36   0.21 
UniRef50_Q9KEQ8 Cluster: Alpha-mannosidase; n=13; Bacillales|Rep...    33   1.5  
UniRef50_Q4U8D0 Cluster: SfiI-subtelomeric related protein famil...    31   4.5  

>UniRef50_UPI00015B5224 Cluster: PREDICTED: similar to npdc-1; n=1;
           Nasonia vitripennis|Rep: PREDICTED: similar to npdc-1 -
           Nasonia vitripennis
          Length = 525

 Score = 87.0 bits (206), Expect = 7e-17
 Identities = 37/47 (78%), Positives = 41/47 (87%)

Query: 1   MSDPESDEENEEGDYTVYECPGFATTGDMEVKNPLFSEDATPATPGK 47
           +S+ ESDEENEEGDYTVYECPG A TG+MEVKNPLF +D TPATP K
Sbjct: 470 VSEAESDEENEEGDYTVYECPGLAPTGEMEVKNPLFHDDPTPATPAK 516


>UniRef50_Q9W0Z5 Cluster: CG30420-PA, isoform A; n=8;
           Endopterygota|Rep: CG30420-PA, isoform A - Drosophila
           melanogaster (Fruit fly)
          Length = 850

 Score = 79.8 bits (188), Expect = 1e-14
 Identities = 36/45 (80%), Positives = 39/45 (86%), Gaps = 1/45 (2%)

Query: 1   MSDPESDEENEEGDYTVYECPGFATTGDMEVKNPLFSEDATPATP 45
           MSD ESD++NEEGDYTVYECPG A TG+MEVKNPLF  D TPATP
Sbjct: 730 MSDVESDDDNEEGDYTVYECPGLAPTGEMEVKNPLFL-DETPATP 773


>UniRef50_Q16MY4 Cluster: Npdc-1; n=1; Aedes aegypti|Rep: Npdc-1 -
           Aedes aegypti (Yellowfever mosquito)
          Length = 340

 Score = 75.8 bits (178), Expect = 2e-13
 Identities = 34/49 (69%), Positives = 40/49 (81%), Gaps = 1/49 (2%)

Query: 2   SDPESDEENEEGDYTVYECPGFATTGDMEVKNPLFSEDATPATPGKCEI 50
           SD ES+++NEEGDYTVYECPG A TG+MEVKNPLF +D T  TPG  +I
Sbjct: 266 SDAESEDDNEEGDYTVYECPGLAPTGEMEVKNPLFLDDPT-ITPGTNQI 313


>UniRef50_UPI0000F1E120 Cluster: PREDICTED: similar to LOC446973
           protein; n=4; Danio rerio|Rep: PREDICTED: similar to
           LOC446973 protein - Danio rerio
          Length = 314

 Score = 65.7 bits (153), Expect = 2e-10
 Identities = 29/40 (72%), Positives = 34/40 (85%), Gaps = 1/40 (2%)

Query: 2   SDPESDEENEEGDYTVYECPGFATTGDMEVKNPLFSEDAT 41
           S   SDEENE+GD+TVYECPG A TG+MEVKNPLF +D+T
Sbjct: 266 SGATSDEENEDGDFTVYECPGLAPTGEMEVKNPLF-DDST 304


>UniRef50_UPI0000F20B21 Cluster: PREDICTED: similar to LOC446973
           protein; n=1; Danio rerio|Rep: PREDICTED: similar to
           LOC446973 protein - Danio rerio
          Length = 307

 Score = 64.5 bits (150), Expect = 4e-10
 Identities = 29/40 (72%), Positives = 33/40 (82%), Gaps = 1/40 (2%)

Query: 2   SDPESDEENEEGDYTVYECPGFATTGDMEVKNPLFSEDAT 41
           S   SDEE EEGD+TVYECPG A TG+MEVKNPLF +D+T
Sbjct: 261 SGGHSDEETEEGDFTVYECPGLAPTGEMEVKNPLF-DDST 299


>UniRef50_UPI0000ECA4B8 Cluster: Neural proliferation
           differentiation and control protein 1 precursor (NPDC-1
           protein).; n=3; Amniota|Rep: Neural proliferation
           differentiation and control protein 1 precursor (NPDC-1
           protein). - Gallus gallus
          Length = 276

 Score = 64.5 bits (150), Expect = 4e-10
 Identities = 27/41 (65%), Positives = 33/41 (80%), Gaps = 1/41 (2%)

Query: 6   SDEENEEGDYTVYECPGFATTGDMEVKNPLFSEDAT-PATP 45
           SDEENE+GD+TVYECPG A TG+MEV+NPLF + +  P  P
Sbjct: 227 SDEENEDGDFTVYECPGLAPTGEMEVRNPLFDDSSLHPPNP 267


>UniRef50_Q9NQX5 Cluster: Neural proliferation differentiation and
           control protein 1 precursor; n=23; Eutheria|Rep: Neural
           proliferation differentiation and control protein 1
           precursor - Homo sapiens (Human)
          Length = 325

 Score = 64.5 bits (150), Expect = 4e-10
 Identities = 27/38 (71%), Positives = 31/38 (81%)

Query: 6   SDEENEEGDYTVYECPGFATTGDMEVKNPLFSEDATPA 43
           SDEENE+GD+TVYECPG A TG+MEV+NPLF   A  A
Sbjct: 276 SDEENEDGDFTVYECPGLAPTGEMEVRNPLFDHAALSA 313


>UniRef50_A7SIF2 Cluster: Predicted protein; n=1; Nematostella
           vectensis|Rep: Predicted protein - Nematostella
           vectensis
          Length = 446

 Score = 60.5 bits (140), Expect = 6e-09
 Identities = 24/36 (66%), Positives = 29/36 (80%)

Query: 3   DPESDEENEEGDYTVYECPGFATTGDMEVKNPLFSE 38
           D E+ +E +EGDYTVYECPG A TGDM V NP+FS+
Sbjct: 353 DDENSDEGDEGDYTVYECPGLAPTGDMTVVNPMFSD 388


>UniRef50_Q640V7 Cluster: LOC446973 protein; n=1; Xenopus
           laevis|Rep: LOC446973 protein - Xenopus laevis (African
           clawed frog)
          Length = 312

 Score = 59.7 bits (138), Expect = 1e-08
 Identities = 23/33 (69%), Positives = 29/33 (87%)

Query: 6   SDEENEEGDYTVYECPGFATTGDMEVKNPLFSE 38
           S++E E+GD+TVYECPG A TG+MEVKNPLF +
Sbjct: 269 SEDETEDGDFTVYECPGLAPTGEMEVKNPLFDD 301


>UniRef50_Q3KTI9 Cluster: SJCHGC06411 protein; n=1; Schistosoma
          japonicum|Rep: SJCHGC06411 protein - Schistosoma
          japonicum (Blood fluke)
          Length = 98

 Score = 51.2 bits (117), Expect = 4e-06
 Identities = 19/29 (65%), Positives = 25/29 (86%)

Query: 11 EEGDYTVYECPGFATTGDMEVKNPLFSED 39
          +EGD+TVYECPG A TG++EV+NPLF  +
Sbjct: 1  DEGDFTVYECPGLANTGEIEVENPLFDNN 29


>UniRef50_Q93249 Cluster: Protein cab-1; n=2; Caenorhabditis|Rep:
           Protein cab-1 - Caenorhabditis elegans
          Length = 425

 Score = 47.2 bits (107), Expect = 6e-05
 Identities = 22/36 (61%), Positives = 27/36 (75%), Gaps = 1/36 (2%)

Query: 2   SDPESDEENEEGDYTVYECPGFATTGDMEVKNPLFS 37
           SD E D  +EE +Y+VYECPG A TGD+EV NP F+
Sbjct: 388 SDGE-DGADEENNYSVYECPGLAPTGDIEVCNPNFA 422


>UniRef50_Q4T8E9 Cluster: Chromosome undetermined SCAF7817, whole
           genome shotgun sequence; n=1; Tetraodon
           nigroviridis|Rep: Chromosome undetermined SCAF7817,
           whole genome shotgun sequence - Tetraodon nigroviridis
           (Green puffer)
          Length = 548

 Score = 35.5 bits (78), Expect = 0.21
 Identities = 14/19 (73%), Positives = 15/19 (78%)

Query: 6   SDEENEEGDYTVYECPGFA 24
           SDEE   GD+TVYECPG A
Sbjct: 147 SDEEEVGGDFTVYECPGLA 165


>UniRef50_Q9KEQ8 Cluster: Alpha-mannosidase; n=13; Bacillales|Rep:
           Alpha-mannosidase - Bacillus halodurans
          Length = 1039

 Score = 32.7 bits (71), Expect = 1.5
 Identities = 18/53 (33%), Positives = 27/53 (50%), Gaps = 1/53 (1%)

Query: 3   DPESDEENEEGDYTVYECPGFATTGDMEVKNPLFSEDATPATPGKCEIVKQQP 55
           DPE+D  N +  Y +Y   G A   D+E +   + + A  A PG+ E+   QP
Sbjct: 905 DPEADIGNHQFTYALYPFQGPAFKRDVE-REATYLQSAIIAVPGEAEMPFDQP 956


>UniRef50_Q4U8D0 Cluster: SfiI-subtelomeric related protein family
           member, putative; n=1; Theileria annulata|Rep:
           SfiI-subtelomeric related protein family member,
           putative - Theileria annulata
          Length = 1784

 Score = 31.1 bits (67), Expect = 4.5
 Identities = 17/43 (39%), Positives = 23/43 (53%), Gaps = 3/43 (6%)

Query: 3   DPESDEENEEGDYTVYECPGFATTGDMEVKNPLFSEDATPATP 45
           D E DEE ++GD       G  T  D   ++ + SED+TP TP
Sbjct: 879 DKEEDEEEDDGDKETKSKEGDKTKED---EDQVESEDSTPVTP 918


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.304    0.128    0.375 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 82,172,556
Number of Sequences: 1657284
Number of extensions: 2733750
Number of successful extensions: 3152
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 3140
Number of HSP's gapped (non-prelim): 15
length of query: 57
length of database: 575,637,011
effective HSP length: 37
effective length of query: 20
effective length of database: 514,317,503
effective search space: 10286350060
effective search space used: 10286350060
T: 11
A: 40
X1: 16 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 43 (21.9 bits)
S2: 65 (30.3 bits)