Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000531-TA|BGIBMGA000531-PA|IPR009635|Neural
proliferation differentiation control-1
(57 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z78416-1|CAB01682.1| 425|Caenorhabditis elegans Hypothetical pr... 47 1e-06
AF293976-1|AAG17881.1| 425|Caenorhabditis elegans CAB-1 protein. 47 1e-06
AF022982-5|AAB69936.2| 799|Caenorhabditis elegans Hypothetical ... 28 0.90
U97006-1|AAC47965.1| 2076|Caenorhabditis elegans Hypothetical pr... 27 2.1
Z46267-15|CAI79255.1| 1100|Caenorhabditis elegans Hypothetical p... 25 6.4
Z46267-14|CAI79254.1| 1030|Caenorhabditis elegans Hypothetical p... 25 6.4
Z46267-13|CAH04746.1| 845|Caenorhabditis elegans Hypothetical p... 25 6.4
Z46267-12|CAD45595.2| 528|Caenorhabditis elegans Hypothetical p... 25 6.4
Z46267-11|CAA86426.1| 611|Caenorhabditis elegans Hypothetical p... 25 6.4
Z46267-10|CAA86425.1| 581|Caenorhabditis elegans Hypothetical p... 25 6.4
Z46267-9|CAA86427.2| 889|Caenorhabditis elegans Hypothetical pr... 25 6.4
Z46267-8|CAA86424.2| 1030|Caenorhabditis elegans Hypothetical pr... 25 6.4
Z46267-7|CAA86429.2| 947|Caenorhabditis elegans Hypothetical pr... 25 6.4
Z46267-6|CAA86428.2| 1215|Caenorhabditis elegans Hypothetical pr... 25 6.4
U41544-1|AAA83183.2| 2275|Caenorhabditis elegans Hypothetical pr... 25 6.4
AF003146-7|AAS80340.2| 487|Caenorhabditis elegans Hypothetical ... 25 8.4
>Z78416-1|CAB01682.1| 425|Caenorhabditis elegans Hypothetical
protein C23H4.1 protein.
Length = 425
Score = 47.2 bits (107), Expect = 1e-06
Identities = 22/36 (61%), Positives = 27/36 (75%), Gaps = 1/36 (2%)
Query: 2 SDPESDEENEEGDYTVYECPGFATTGDMEVKNPLFS 37
SD E D +EE +Y+VYECPG A TGD+EV NP F+
Sbjct: 388 SDGE-DGADEENNYSVYECPGLAPTGDIEVCNPNFA 422
>AF293976-1|AAG17881.1| 425|Caenorhabditis elegans CAB-1 protein.
Length = 425
Score = 47.2 bits (107), Expect = 1e-06
Identities = 22/36 (61%), Positives = 27/36 (75%), Gaps = 1/36 (2%)
Query: 2 SDPESDEENEEGDYTVYECPGFATTGDMEVKNPLFS 37
SD E D +EE +Y+VYECPG A TGD+EV NP F+
Sbjct: 388 SDGE-DGADEENNYSVYECPGLAPTGDIEVCNPNFA 422
>AF022982-5|AAB69936.2| 799|Caenorhabditis elegans Hypothetical
protein T23B12.4 protein.
Length = 799
Score = 27.9 bits (59), Expect = 0.90
Identities = 14/57 (24%), Positives = 28/57 (49%)
Query: 1 MSDPESDEENEEGDYTVYECPGFATTGDMEVKNPLFSEDATPATPGKCEIVKQQPKK 57
+ DP D + GD+ V+E + + K+ + D TP++ K E +++ +K
Sbjct: 225 IEDPNFDHKVHLGDFYVHEKEYEGAEENSDEKSEESTSDPTPSSEAKSETTEKKEQK 281
>U97006-1|AAC47965.1| 2076|Caenorhabditis elegans Hypothetical
protein C13F10.4 protein.
Length = 2076
Score = 26.6 bits (56), Expect = 2.1
Identities = 13/51 (25%), Positives = 23/51 (45%)
Query: 2 SDPESDEENEEGDYTVYECPGFATTGDMEVKNPLFSEDATPATPGKCEIVK 52
S E++ EN GD ++C A G + V + S+ +T + +K
Sbjct: 602 SAKEAESENSRGDAFSWQCAMIAQAGALSVMEAVASQPELSSTNNALDAMK 652
>Z46267-15|CAI79255.1| 1100|Caenorhabditis elegans Hypothetical
protein F49E2.5j protein.
Length = 1100
Score = 25.0 bits (52), Expect = 6.4
Identities = 13/31 (41%), Positives = 14/31 (45%)
Query: 26 TGDMEVKNPLFSEDATPATPGKCEIVKQQPK 56
TG KN SE A P E V +QPK
Sbjct: 212 TGKKNKKNKKKSESEATAAPASVEQVVEQPK 242
>Z46267-14|CAI79254.1| 1030|Caenorhabditis elegans Hypothetical
protein F49E2.5i protein.
Length = 1030
Score = 25.0 bits (52), Expect = 6.4
Identities = 13/31 (41%), Positives = 14/31 (45%)
Query: 26 TGDMEVKNPLFSEDATPATPGKCEIVKQQPK 56
TG KN SE A P E V +QPK
Sbjct: 212 TGKKNKKNKKKSESEATAAPASVEQVVEQPK 242
>Z46267-13|CAH04746.1| 845|Caenorhabditis elegans Hypothetical
protein F49E2.5h protein.
Length = 845
Score = 25.0 bits (52), Expect = 6.4
Identities = 13/31 (41%), Positives = 14/31 (45%)
Query: 26 TGDMEVKNPLFSEDATPATPGKCEIVKQQPK 56
TG KN SE A P E V +QPK
Sbjct: 212 TGKKNKKNKKKSESEATAAPASVEQVVEQPK 242
>Z46267-12|CAD45595.2| 528|Caenorhabditis elegans Hypothetical
protein F49E2.5g protein.
Length = 528
Score = 25.0 bits (52), Expect = 6.4
Identities = 13/31 (41%), Positives = 14/31 (45%)
Query: 26 TGDMEVKNPLFSEDATPATPGKCEIVKQQPK 56
TG KN SE A P E V +QPK
Sbjct: 212 TGKKNKKNKKKSESEATAAPASVEQVVEQPK 242
>Z46267-11|CAA86426.1| 611|Caenorhabditis elegans Hypothetical
protein F49E2.5f protein.
Length = 611
Score = 25.0 bits (52), Expect = 6.4
Identities = 13/31 (41%), Positives = 14/31 (45%)
Query: 26 TGDMEVKNPLFSEDATPATPGKCEIVKQQPK 56
TG KN SE A P E V +QPK
Sbjct: 212 TGKKNKKNKKKSESEATAAPASVEQVVEQPK 242
>Z46267-10|CAA86425.1| 581|Caenorhabditis elegans Hypothetical
protein F49E2.5e protein.
Length = 581
Score = 25.0 bits (52), Expect = 6.4
Identities = 13/31 (41%), Positives = 14/31 (45%)
Query: 26 TGDMEVKNPLFSEDATPATPGKCEIVKQQPK 56
TG KN SE A P E V +QPK
Sbjct: 212 TGKKNKKNKKKSESEATAAPASVEQVVEQPK 242
>Z46267-9|CAA86427.2| 889|Caenorhabditis elegans Hypothetical
protein F49E2.5d protein.
Length = 889
Score = 25.0 bits (52), Expect = 6.4
Identities = 13/31 (41%), Positives = 14/31 (45%)
Query: 26 TGDMEVKNPLFSEDATPATPGKCEIVKQQPK 56
TG KN SE A P E V +QPK
Sbjct: 212 TGKKNKKNKKKSESEATAAPASVEQVVEQPK 242
>Z46267-8|CAA86424.2| 1030|Caenorhabditis elegans Hypothetical
protein F49E2.5c protein.
Length = 1030
Score = 25.0 bits (52), Expect = 6.4
Identities = 13/31 (41%), Positives = 14/31 (45%)
Query: 26 TGDMEVKNPLFSEDATPATPGKCEIVKQQPK 56
TG KN SE A P E V +QPK
Sbjct: 212 TGKKNKKNKKKSESEATAAPASVEQVVEQPK 242
>Z46267-7|CAA86429.2| 947|Caenorhabditis elegans Hypothetical
protein F49E2.5b protein.
Length = 947
Score = 25.0 bits (52), Expect = 6.4
Identities = 13/31 (41%), Positives = 14/31 (45%)
Query: 26 TGDMEVKNPLFSEDATPATPGKCEIVKQQPK 56
TG KN SE A P E V +QPK
Sbjct: 212 TGKKNKKNKKKSESEATAAPASVEQVVEQPK 242
>Z46267-6|CAA86428.2| 1215|Caenorhabditis elegans Hypothetical
protein F49E2.5a protein.
Length = 1215
Score = 25.0 bits (52), Expect = 6.4
Identities = 13/31 (41%), Positives = 14/31 (45%)
Query: 26 TGDMEVKNPLFSEDATPATPGKCEIVKQQPK 56
TG KN SE A P E V +QPK
Sbjct: 212 TGKKNKKNKKKSESEATAAPASVEQVVEQPK 242
>U41544-1|AAA83183.2| 2275|Caenorhabditis elegans Hypothetical
protein M03A8.2 protein.
Length = 2275
Score = 25.0 bits (52), Expect = 6.4
Identities = 13/36 (36%), Positives = 16/36 (44%)
Query: 7 DEENEEGDYTVYECPGFATTGDMEVKNPLFSEDATP 42
DE E D + FAT +E+ N FS TP
Sbjct: 366 DESKVETDVFIKGINVFATPSQIEIVNRFFSSIVTP 401
>AF003146-7|AAS80340.2| 487|Caenorhabditis elegans Hypothetical
protein F56F4.1 protein.
Length = 487
Score = 24.6 bits (51), Expect = 8.4
Identities = 15/48 (31%), Positives = 22/48 (45%), Gaps = 7/48 (14%)
Query: 5 ESDEENEEGDYTVYE-------CPGFATTGDMEVKNPLFSEDATPATP 45
ESD E EEGD TV G+ T +++++ L+ P P
Sbjct: 240 ESDSEEEEGDLTVLMEEEEKSLSSGYDTESEVDIEWELYKISRAPLGP 287
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.304 0.128 0.375
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,925,740
Number of Sequences: 27539
Number of extensions: 70895
Number of successful extensions: 84
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 69
Number of HSP's gapped (non-prelim): 16
length of query: 57
length of database: 12,573,161
effective HSP length: 38
effective length of query: 19
effective length of database: 11,526,679
effective search space: 219006901
effective search space used: 219006901
T: 11
A: 40
X1: 16 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 43 (21.9 bits)
S2: 51 (24.6 bits)
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