Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000530-TA|BGIBMGA000530-PA|IPR009635|Neural
proliferation differentiation control-1
(361 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z78416-1|CAB01682.1| 425|Caenorhabditis elegans Hypothetical pr... 46 4e-05
AF293976-1|AAG17881.1| 425|Caenorhabditis elegans CAB-1 protein. 46 4e-05
Z81115-6|CAD45598.1| 630|Caenorhabditis elegans Hypothetical pr... 33 0.32
AL032658-6|CAA21747.2| 630|Caenorhabditis elegans Hypothetical ... 33 0.32
Z69385-7|CAA93429.2| 508|Caenorhabditis elegans Hypothetical pr... 32 0.73
U80437-15|AAB37627.1| 445|Caenorhabditis elegans Mus (drosophil... 32 0.73
U40797-15|AAB37553.2| 1004|Caenorhabditis elegans Temporarily as... 32 0.73
U10402-8|AAA19070.2| 1024|Caenorhabditis elegans Hypothetical pr... 31 1.3
Z75955-10|CAB00123.1| 406|Caenorhabditis elegans Hypothetical p... 30 2.2
Z79755-11|CAB02109.1| 2034|Caenorhabditis elegans Hypothetical p... 30 2.9
U57652-1|AAB02243.1| 2034|Caenorhabditis elegans FER-1 protein. 30 2.9
AC006833-6|AAF60950.1| 491|Caenorhabditis elegans Hypothetical ... 30 2.9
Z81042-3|CAB02794.2| 660|Caenorhabditis elegans Hypothetical pr... 29 5.1
Z71186-8|CAA94917.2| 1322|Caenorhabditis elegans Hypothetical pr... 29 5.1
Z81592-8|CAB04730.1| 365|Caenorhabditis elegans Hypothetical pr... 29 6.8
Z81585-4|CAB04687.1| 345|Caenorhabditis elegans Hypothetical pr... 29 6.8
Z70036-1|CAA93875.1| 522|Caenorhabditis elegans Hypothetical pr... 29 6.8
Z31590-5|CAA83462.1| 245|Caenorhabditis elegans Hypothetical pr... 29 6.8
U39645-3|AAA80362.3| 439|Caenorhabditis elegans Gustatory recep... 29 6.8
AF387605-1|AAK70488.1| 427|Caenorhabditis elegans putative chem... 29 6.8
AF067948-4|AAO25983.1| 756|Caenorhabditis elegans Egl-27 relate... 29 6.8
AF067948-3|AAO25984.1| 870|Caenorhabditis elegans Egl-27 relate... 29 6.8
AF067948-2|AAD34654.1| 870|Caenorhabditis elegans Egl-27 relate... 29 6.8
AF067948-1|AAD34653.1| 1022|Caenorhabditis elegans Egl-27 relate... 29 6.8
Z83110-6|CAB05528.3| 545|Caenorhabditis elegans Hypothetical pr... 28 9.0
Z81462-7|CAB03846.3| 545|Caenorhabditis elegans Hypothetical pr... 28 9.0
U23168-1|AAU87832.1| 7548|Caenorhabditis elegans Temporarily ass... 28 9.0
AF408761-1|AAO27840.1| 741|Caenorhabditis elegans Rap1GAP protein. 28 9.0
AF016660-2|AAB66048.2| 811|Caenorhabditis elegans Hypothetical ... 28 9.0
AF016660-1|AAK71368.1| 742|Caenorhabditis elegans Hypothetical ... 28 9.0
AF000299-7|AAC47982.1| 168|Caenorhabditis elegans Hypothetical ... 28 9.0
>Z78416-1|CAB01682.1| 425|Caenorhabditis elegans Hypothetical
protein C23H4.1 protein.
Length = 425
Score = 46.0 bits (104), Expect = 4e-05
Identities = 26/80 (32%), Positives = 41/80 (51%), Gaps = 7/80 (8%)
Query: 283 LMAAIGTALTMAILGFAFG---WYTLSKRAKAAADVDYPAYGVTGP----TVDSSGDRKL 335
L+ A+GT + + ++G G +Y ++R + D +Y Y TGP + GD L
Sbjct: 301 LLLAVGTVMCVGLIGTVAGGTYYYKNNRRTETPDDGEYAPYAGTGPGFRKNKGNKGDETL 360
Query: 336 AQSAHMYHYQHQKQQIIAME 355
A A ++ YQ KQ+II E
Sbjct: 361 AYKAQLHQYQQAKQKIICGE 380
>AF293976-1|AAG17881.1| 425|Caenorhabditis elegans CAB-1 protein.
Length = 425
Score = 46.0 bits (104), Expect = 4e-05
Identities = 26/80 (32%), Positives = 41/80 (51%), Gaps = 7/80 (8%)
Query: 283 LMAAIGTALTMAILGFAFG---WYTLSKRAKAAADVDYPAYGVTGP----TVDSSGDRKL 335
L+ A+GT + + ++G G +Y ++R + D +Y Y TGP + GD L
Sbjct: 301 LLLAVGTVMCVGLIGTVAGGTYYYKNNRRTETPDDGEYAPYAGTGPGFRKNKGNKGDETL 360
Query: 336 AQSAHMYHYQHQKQQIIAME 355
A A ++ YQ KQ+II E
Sbjct: 361 AYKAQLHQYQQAKQKIICGE 380
>Z81115-6|CAD45598.1| 630|Caenorhabditis elegans Hypothetical
protein Y76A2B.6 protein.
Length = 630
Score = 33.1 bits (72), Expect = 0.32
Identities = 18/52 (34%), Positives = 28/52 (53%), Gaps = 4/52 (7%)
Query: 166 FNIPDEPKEITEKETKGFALTPFNKEYYEEQNISENTNETMPNDSVEIAELE 217
F +P E ++T +GF P K++YE QN S N MP +EI++ +
Sbjct: 333 FVVPPEVFDVTHPGNQGFC-NPSEKQFYESQNDSSN---CMPKGLLEISKCQ 380
>AL032658-6|CAA21747.2| 630|Caenorhabditis elegans Hypothetical
protein Y76A2B.6 protein.
Length = 630
Score = 33.1 bits (72), Expect = 0.32
Identities = 18/52 (34%), Positives = 28/52 (53%), Gaps = 4/52 (7%)
Query: 166 FNIPDEPKEITEKETKGFALTPFNKEYYEEQNISENTNETMPNDSVEIAELE 217
F +P E ++T +GF P K++YE QN S N MP +EI++ +
Sbjct: 333 FVVPPEVFDVTHPGNQGFC-NPSEKQFYESQNDSSN---CMPKGLLEISKCQ 380
>Z69385-7|CAA93429.2| 508|Caenorhabditis elegans Hypothetical
protein ZK593.8 protein.
Length = 508
Score = 31.9 bits (69), Expect = 0.73
Identities = 24/109 (22%), Positives = 41/109 (37%)
Query: 2 HAVTTVLVAAIGICAIAKSPGATTAPTMPQTMNSGEEDKQIPSPMNYFRNVIIPKYMIPH 61
+++TTV++ ++ + I + T+ + + + K P P N I
Sbjct: 40 YSLTTVIIISVLVSLICQHFVPYAVSTLHTVIKNSPKQKSSPPPSNRLNIGFISGNSPEK 99
Query: 62 YIKYVDKPGFLPQPIVFTDSKPDLLTKEIIHLNEMETDENDEKEFNDLI 110
Y V KP FL PI K ++ E END + + I
Sbjct: 100 YAPAVQKPTFLVDPIYDEKWKGIQTAVPVMSTQTDEKRENDPAKVKEAI 148
>U80437-15|AAB37627.1| 445|Caenorhabditis elegans Mus (drosophila
mutagen sensitive)related protein 81, isoform a protein.
Length = 445
Score = 31.9 bits (69), Expect = 0.73
Identities = 27/89 (30%), Positives = 46/89 (51%), Gaps = 8/89 (8%)
Query: 87 TKEIIHL-NEMETDENDEKEFNDLITKNFMSRIMEVGSPV-PKQVYSSGG--SNKAEINL 142
TK I+ + NE E+D +D+K+ + +TK ++ +V PV P + S G S+ + +
Sbjct: 129 TKTIVDIENEFESDGDDDKQPSVPLTK---TKSFQVSKPVQPSLIRSQSGNLSSSSSTSS 185
Query: 143 KHANIPAPHS-DINSARPIVQPQSFNIPD 170
+N P S + + RP QP + I D
Sbjct: 186 SSSNSSDPLSFRLLTCRPFEQPTVYLIAD 214
>U40797-15|AAB37553.2| 1004|Caenorhabditis elegans Temporarily
assigned gene nameprotein 77 protein.
Length = 1004
Score = 31.9 bits (69), Expect = 0.73
Identities = 25/92 (27%), Positives = 40/92 (43%), Gaps = 5/92 (5%)
Query: 143 KHANIPAPHSDINSARPIVQPQSF-NIPDEPKEITEKETKGFALTPFNKEYYEEQNISEN 201
K A++ P D N+ RP +S NIP+EP+E+ T +L P K + +
Sbjct: 37 KPASLSPPPDDENTIRPPSSSESSENIPEEPQELITPNTTRRSLGP--KPTVAPKPLF-- 92
Query: 202 TNETMPNDSVEIAELEALPKLEPRQIRQNPNL 233
N +P+ S + PK +P P +
Sbjct: 93 LNGLLPSSSTSDVSSQNSPKCDPHPSCTTPTI 124
>U10402-8|AAA19070.2| 1024|Caenorhabditis elegans Hypothetical
protein C34E10.8 protein.
Length = 1024
Score = 31.1 bits (67), Expect = 1.3
Identities = 22/102 (21%), Positives = 41/102 (40%), Gaps = 2/102 (1%)
Query: 120 EVGSPVPKQVYSSGGSNKAEINLKHANIPAPHSDINSARPIVQPQSFNIPDEPKEITEKE 179
+ G+P K+ + G + + ++P P S+ SF+ P E+ EK
Sbjct: 783 KAGAPGAKESSKAAGGAQKGTSAASTSVPEPTKSSESSVDPQSDVSFSNPSPAPEVIEKV 842
Query: 180 TKGFALTPFNKEYYEEQNISENTNE--TMPNDSVEIAELEAL 219
NK +E SE+T+ T+ +D+ + E +
Sbjct: 843 APAAMTITSNKRKIDETLASESTSSEATLIHDTTSSSSAETV 884
>Z75955-10|CAB00123.1| 406|Caenorhabditis elegans Hypothetical
protein R07B7.14 protein.
Length = 406
Score = 30.3 bits (65), Expect = 2.2
Identities = 16/50 (32%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Query: 83 PDLLTKEIIHLNEMETDENDEKEFNDLITKNFMSRIMEVGSPVPKQVYSS 132
PD L+ + + ME + +EK FN +I ++F S + + SP+ ++ SS
Sbjct: 358 PDRLSSILSIMPIMENQQKEEKSFN-VILRSFYSNVSILVSPLYDEIMSS 406
>Z79755-11|CAB02109.1| 2034|Caenorhabditis elegans Hypothetical
protein F43G9.6 protein.
Length = 2034
Score = 29.9 bits (64), Expect = 2.9
Identities = 30/99 (30%), Positives = 43/99 (43%), Gaps = 6/99 (6%)
Query: 31 QTMNSGEEDKQIPSPMNYFRNVIIPKYM---IPHYIKYVDKPGFLPQPIVFTDSKPDLLT 87
Q + D P PM F VI+P + P I D F QP+V + D L
Sbjct: 1174 QPLKDVRRDPNFPEPMIVFGEVILPSALELSPPLIINLFDARAFNRQPLVGSCLVSD-LH 1232
Query: 88 KEIIHL-NEMETDENDEKEFNDL-ITKNFMSRIMEVGSP 124
K + H+ ++++D + E DL IT+ F I V P
Sbjct: 1233 KYVSHIVPKVKSDHAERWEQLDLVITEEFDQIIRMVRVP 1271
>U57652-1|AAB02243.1| 2034|Caenorhabditis elegans FER-1 protein.
Length = 2034
Score = 29.9 bits (64), Expect = 2.9
Identities = 30/99 (30%), Positives = 43/99 (43%), Gaps = 6/99 (6%)
Query: 31 QTMNSGEEDKQIPSPMNYFRNVIIPKYM---IPHYIKYVDKPGFLPQPIVFTDSKPDLLT 87
Q + D P PM F VI+P + P I D F QP+V + D L
Sbjct: 1174 QPLKDVRRDPNFPEPMIVFGEVILPSALELSPPLIINLFDARAFNRQPLVGSCLVSD-LH 1232
Query: 88 KEIIHL-NEMETDENDEKEFNDL-ITKNFMSRIMEVGSP 124
K + H+ ++++D + E DL IT+ F I V P
Sbjct: 1233 KYVSHIVPKVKSDHAERWEQLDLVITEEFDQIIRMVRVP 1271
>AC006833-6|AAF60950.1| 491|Caenorhabditis elegans Hypothetical
protein ZK616.1 protein.
Length = 491
Score = 29.9 bits (64), Expect = 2.9
Identities = 21/85 (24%), Positives = 42/85 (49%), Gaps = 5/85 (5%)
Query: 146 NIPAPHSDINSARPIVQPQSFNIPDEPKEITEKETKGFALTPFNKEYYEEQNISENTNET 205
+IP P + + P+ + IP+EPK++ E+ K P N+E E+ + E +
Sbjct: 364 DIPPPKNKESGTPPLKEKTPEPIPEEPKKVEEEVKK--PEVPKNEEPKMEEPVKEEAPKV 421
Query: 206 MPNDSVEIAELEALPKLE-PRQIRQ 229
+ E ++ PK+E P ++++
Sbjct: 422 --EEKKEEVKMVEDPKVESPLEVKK 444
>Z81042-3|CAB02794.2| 660|Caenorhabditis elegans Hypothetical
protein C27H6.3 protein.
Length = 660
Score = 29.1 bits (62), Expect = 5.1
Identities = 26/97 (26%), Positives = 46/97 (47%), Gaps = 4/97 (4%)
Query: 194 EEQNISENTNETMPNDSVEI-AELEALPKLEPRQIRQNPNLGKA---KALVADDLDKLKI 249
E +N+ E ++ + ++ V+I +E E + +L Q +L A KAL D ++
Sbjct: 47 ELENVDELEDDELSSEEVDIPSENEVIVELHDGQAEVEESLLDALLGKALAGDQMNSRIE 106
Query: 250 GLYGDDGSTNKPHHIHLLESGSSDPSDSIFGVALMAA 286
GL+ D S+ +P I E D S+ V+ +A
Sbjct: 107 GLFEDLDSSVEPDIIDRSELEDVDSGISVGAVSSSSA 143
>Z71186-8|CAA94917.2| 1322|Caenorhabditis elegans Hypothetical protein
F23D12.2 protein.
Length = 1322
Score = 29.1 bits (62), Expect = 5.1
Identities = 29/109 (26%), Positives = 46/109 (42%), Gaps = 18/109 (16%)
Query: 124 PVPKQVYSSGGSN-----------KAEINLKHA---NIPAPHSDINSARPIVQPQSFNIP 169
P+PK V SSG S K E+N + A N+ I S P+VQP + P
Sbjct: 1042 PIPKAVNSSGNSTRSIVIEETNTVKTELNARKAAEINLQITKPPI-STIPVVQPST---P 1097
Query: 170 DEPKEITEKETKGFALTPFNKEYYEEQNISENTNETMPNDSVEIAELEA 218
++I K A+ EY Q + ++ E N + +++ + A
Sbjct: 1098 SSTRKILVSNVKLPAILQSKDEYIASQKLMQDLREKTQNLAKQLSIISA 1146
>Z81592-8|CAB04730.1| 365|Caenorhabditis elegans Hypothetical
protein T16G1.8 protein.
Length = 365
Score = 28.7 bits (61), Expect = 6.8
Identities = 20/75 (26%), Positives = 31/75 (41%), Gaps = 5/75 (6%)
Query: 113 NFMSRIMEVGSPVPKQVYSSGGSNKAEINLKHANIPAPHSDINSARPIVQPQSFNIPDEP 172
++ + V +PVP Y SG SN +A+ PA S S + P +P P
Sbjct: 62 SYSASYASVPAPVPSPFYQSGWSNPIP---SYASAPALPS--YSTAYSMAPPPLILPSSP 116
Query: 173 KEITEKETKGFALTP 187
+ ++LTP
Sbjct: 117 SYVAPVSAPSYSLTP 131
>Z81585-4|CAB04687.1| 345|Caenorhabditis elegans Hypothetical
protein T05E12.4 protein.
Length = 345
Score = 28.7 bits (61), Expect = 6.8
Identities = 18/48 (37%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Query: 258 TNKPHHIHLLESGSSDPSDSIFGVALMAAIGTALTMAILGFAFGWYTL 305
T K +LL+S SS+ SD+ F + L I L+ + GF GW L
Sbjct: 229 TIKKRKANLLKSTSSNQSDNKFKMILWLTITFMLSEGLTGFT-GWMQL 275
>Z70036-1|CAA93875.1| 522|Caenorhabditis elegans Hypothetical
protein T01B4.1 protein.
Length = 522
Score = 28.7 bits (61), Expect = 6.8
Identities = 14/38 (36%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Query: 81 SKPDLLTKEII-HLNEMETDENDEKEFNDLITKNFMSR 117
S+ LL ++ HL +M +++EK +LITK F+ R
Sbjct: 77 SESSLLAVNLLEHLKQMNCGQSNEKRCLELITKTFIQR 114
>Z31590-5|CAA83462.1| 245|Caenorhabditis elegans Hypothetical
protein R01H10.4 protein.
Length = 245
Score = 28.7 bits (61), Expect = 6.8
Identities = 22/71 (30%), Positives = 28/71 (39%), Gaps = 2/71 (2%)
Query: 274 PSDSIFGVALMAAIGTALTMAILGFAFGWYTLSKRAKAAADVDYPAYGVTGPTVDSSGDR 333
P +F V A G A L AF ++S+ K A D+ YG T D S R
Sbjct: 3 PRFLVFSVLASLATGPPTADAFLASAFS--SVSQAGKTANCHDWSEYGPCFSTADRSFWR 60
Query: 334 KLAQSAHMYHY 344
L Q + Y
Sbjct: 61 TLPQQCYQNRY 71
>U39645-3|AAA80362.3| 439|Caenorhabditis elegans Gustatory receptor
family protein 2 protein.
Length = 439
Score = 28.7 bits (61), Expect = 6.8
Identities = 12/36 (33%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Query: 327 VDSSGDRKLAQSAHMYHYQ-HQKQQIIAMERYTTFT 361
++ GDR +A S MYH H+++ + + + T FT
Sbjct: 346 INEDGDRLVASSFRMYHETFHEERDLTVLSQMTFFT 381
>AF387605-1|AAK70488.1| 427|Caenorhabditis elegans putative
chemoreceptor GUR-2 protein.
Length = 427
Score = 28.7 bits (61), Expect = 6.8
Identities = 12/36 (33%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Query: 327 VDSSGDRKLAQSAHMYHYQ-HQKQQIIAMERYTTFT 361
++ GDR +A S MYH H+++ + + + T FT
Sbjct: 334 INEDGDRLVASSFRMYHETFHEERDLTVLSQMTFFT 369
>AF067948-4|AAO25983.1| 756|Caenorhabditis elegans Egl-27 related
protein 1, isoform c protein.
Length = 756
Score = 28.7 bits (61), Expect = 6.8
Identities = 18/53 (33%), Positives = 25/53 (47%), Gaps = 2/53 (3%)
Query: 171 EPKEITEKETKGFALTPFNKEYYEEQNISENTNETMPNDSVEIAELEALPKLE 223
EP + KE K L K+ EE + E ND + IAE E +P+L+
Sbjct: 296 EPADREAKEAK--VLAEKVKKEEEEAKLKAEAEEDTENDGLTIAEDEEMPELK 346
>AF067948-3|AAO25984.1| 870|Caenorhabditis elegans Egl-27 related
protein 1, isoform d protein.
Length = 870
Score = 28.7 bits (61), Expect = 6.8
Identities = 18/53 (33%), Positives = 25/53 (47%), Gaps = 2/53 (3%)
Query: 171 EPKEITEKETKGFALTPFNKEYYEEQNISENTNETMPNDSVEIAELEALPKLE 223
EP + KE K L K+ EE + E ND + IAE E +P+L+
Sbjct: 296 EPADREAKEAK--VLAEKVKKEEEEAKLKAEAEEDTENDGLTIAEDEEMPELK 346
>AF067948-2|AAD34654.1| 870|Caenorhabditis elegans Egl-27 related
protein 1, isoform b protein.
Length = 870
Score = 28.7 bits (61), Expect = 6.8
Identities = 18/53 (33%), Positives = 25/53 (47%), Gaps = 2/53 (3%)
Query: 171 EPKEITEKETKGFALTPFNKEYYEEQNISENTNETMPNDSVEIAELEALPKLE 223
EP + KE K L K+ EE + E ND + IAE E +P+L+
Sbjct: 296 EPADREAKEAK--VLAEKVKKEEEEAKLKAEAEEDTENDGLTIAEDEEMPELK 346
>AF067948-1|AAD34653.1| 1022|Caenorhabditis elegans Egl-27 related
protein 1, isoform a protein.
Length = 1022
Score = 28.7 bits (61), Expect = 6.8
Identities = 18/53 (33%), Positives = 25/53 (47%), Gaps = 2/53 (3%)
Query: 171 EPKEITEKETKGFALTPFNKEYYEEQNISENTNETMPNDSVEIAELEALPKLE 223
EP + KE K L K+ EE + E ND + IAE E +P+L+
Sbjct: 296 EPADREAKEAK--VLAEKVKKEEEEAKLKAEAEEDTENDGLTIAEDEEMPELK 346
>Z83110-6|CAB05528.3| 545|Caenorhabditis elegans Hypothetical
protein F57C2.6 protein.
Length = 545
Score = 28.3 bits (60), Expect = 9.0
Identities = 11/33 (33%), Positives = 22/33 (66%)
Query: 85 LLTKEIIHLNEMETDENDEKEFNDLITKNFMSR 117
LL ++ ++ + E +E+DE+ FN ++ NF +R
Sbjct: 285 LLGEQFVYQPDEEDEEDDEEVFNVSVSSNFSTR 317
>Z81462-7|CAB03846.3| 545|Caenorhabditis elegans Hypothetical
protein F57C2.6 protein.
Length = 545
Score = 28.3 bits (60), Expect = 9.0
Identities = 11/33 (33%), Positives = 22/33 (66%)
Query: 85 LLTKEIIHLNEMETDENDEKEFNDLITKNFMSR 117
LL ++ ++ + E +E+DE+ FN ++ NF +R
Sbjct: 285 LLGEQFVYQPDEEDEEDDEEVFNVSVSSNFSTR 317
>U23168-1|AAU87832.1| 7548|Caenorhabditis elegans Temporarily assigned
gene nameprotein 308, isoform c protein.
Length = 7548
Score = 28.3 bits (60), Expect = 9.0
Identities = 13/43 (30%), Positives = 24/43 (55%)
Query: 136 NKAEINLKHANIPAPHSDINSARPIVQPQSFNIPDEPKEITEK 178
+K E+++K + A + D + + ++ NIPD KEI +K
Sbjct: 4128 SKTEMSMKAVSENAVNQDHSLKKDSIEAVEMNIPDSRKEILQK 4170
>AF408761-1|AAO27840.1| 741|Caenorhabditis elegans Rap1GAP protein.
Length = 741
Score = 28.3 bits (60), Expect = 9.0
Identities = 13/53 (24%), Positives = 25/53 (47%)
Query: 92 HLNEMETDENDEKEFNDLITKNFMSRIMEVGSPVPKQVYSSGGSNKAEINLKH 144
H NE + + ++ +T+N M+ ++ P P+ V S G +N +H
Sbjct: 111 HQNEQTHQKTNGSAVHNQLTRNIMNEVLTKVGPYPQIVLPSNGFWMDGVNQQH 163
>AF016660-2|AAB66048.2| 811|Caenorhabditis elegans Hypothetical
protein F53A10.2c protein.
Length = 811
Score = 28.3 bits (60), Expect = 9.0
Identities = 13/53 (24%), Positives = 25/53 (47%)
Query: 92 HLNEMETDENDEKEFNDLITKNFMSRIMEVGSPVPKQVYSSGGSNKAEINLKH 144
H NE + + ++ +T+N M+ ++ P P+ V S G +N +H
Sbjct: 181 HQNEQTHQKTNGSAVHNQLTRNIMNEVLTKVGPYPQIVLPSNGFWMDGVNQQH 233
>AF016660-1|AAK71368.1| 742|Caenorhabditis elegans Hypothetical
protein F53A10.2a protein.
Length = 742
Score = 28.3 bits (60), Expect = 9.0
Identities = 13/53 (24%), Positives = 25/53 (47%)
Query: 92 HLNEMETDENDEKEFNDLITKNFMSRIMEVGSPVPKQVYSSGGSNKAEINLKH 144
H NE + + ++ +T+N M+ ++ P P+ V S G +N +H
Sbjct: 112 HQNEQTHQKTNGSAVHNQLTRNIMNEVLTKVGPYPQIVLPSNGFWMDGVNQQH 164
>AF000299-7|AAC47982.1| 168|Caenorhabditis elegans Hypothetical
protein E03H12.7 protein.
Length = 168
Score = 28.3 bits (60), Expect = 9.0
Identities = 24/100 (24%), Positives = 42/100 (42%), Gaps = 8/100 (8%)
Query: 121 VGSPVPKQVYSSGGSNKAEI---NLKHANIPAPHSDINSARPIVQPQ----SFNIPDEPK 173
+ P P + G K E + PAP D +A+P+ Q Q F +P E K
Sbjct: 56 ITDPTPSALAKVGSDEKKEEPKDDKGDTKSPAPDGDAAAAKPVDQSQKPFPKFEMPTESK 115
Query: 174 EITE-KETKGFALTPFNKEYYEEQNISENTNETMPNDSVE 212
+ + E + +Y+E++ ++T E + + VE
Sbjct: 116 KKKKMAENEVDKKEKMKNGFYQEKSDEDDTLEKVDSLKVE 155
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.313 0.131 0.377
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,546,472
Number of Sequences: 27539
Number of extensions: 451569
Number of successful extensions: 1172
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 23
Number of HSP's that attempted gapping in prelim test: 1155
Number of HSP's gapped (non-prelim): 40
length of query: 361
length of database: 12,573,161
effective HSP length: 82
effective length of query: 279
effective length of database: 10,314,963
effective search space: 2877874677
effective search space used: 2877874677
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 60 (28.3 bits)
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