Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000530-TA|BGIBMGA000530-PA|IPR009635|Neural
proliferation differentiation control-1
(361 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g38150.1 68417.m05386 pentatricopeptide (PPR) repeat-containi... 35 0.097
At3g46290.1 68416.m05010 protein kinase, putative similar to rec... 33 0.30
At1g63780.1 68414.m07218 brix domain-containing protein contains... 31 0.90
At1g51830.1 68414.m05843 leucine-rich repeat protein kinase, put... 31 0.90
At4g27530.1 68417.m03954 expressed protein 31 1.2
At4g17850.1 68417.m02662 hypothetical protein 31 1.2
At2g30530.1 68415.m03718 expressed protein 31 1.2
At1g44970.1 68414.m05155 peroxidase, putative similar to peroxid... 30 2.1
At1g79000.1 68414.m09212 p300/CBP acetyltransferase-related prot... 30 2.8
At1g51820.1 68414.m05841 leucine-rich repeat protein kinase, put... 30 2.8
At4g02140.1 68417.m00286 expressed protein 29 6.4
At1g08130.1 68414.m00892 DNA ligase / polydeoxyribonucleotide sy... 29 6.4
At5g40100.1 68418.m04864 disease resistance protein (TIR-NBS-LRR... 28 8.4
At5g09840.1 68418.m01138 expressed protein contains Pfam profile... 28 8.4
At4g30910.1 68417.m04389 cytosol aminopeptidase family protein c... 28 8.4
At3g62680.1 68416.m07041 proline-rich family protein contains pr... 28 8.4
At3g20630.1 68416.m02610 ubiquitin-specific protease 14, putativ... 28 8.4
At1g55150.1 68414.m06298 DEAD box RNA helicase, putative (RH20) ... 28 8.4
>At4g38150.1 68417.m05386 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 302
Score = 34.7 bits (76), Expect = 0.097
Identities = 26/82 (31%), Positives = 38/82 (46%), Gaps = 4/82 (4%)
Query: 200 ENTNETMPNDSVEIAELEALPKLEPRQIRQNPNLGKAKALVADD--LDKLKIGLYGDDGS 257
+N E +PN + E + EP RQ NLGK+ ++DD L++ K+G+ D
Sbjct: 43 QNPPEPLPNRPLR-GERSSNSHREP-PARQAHNLGKSDTTLSDDGFLEQFKLGVNQDSRE 100
Query: 258 TNKPHHIHLLESGSSDPSDSIF 279
T KP + SD IF
Sbjct: 101 TPKPEQYPQEPLPPPEDSDEIF 122
>At3g46290.1 68416.m05010 protein kinase, putative similar to
receptor-like protein kinase [Catharanthus roseus]
gi|1644291|emb|CAA97692
Length = 830
Score = 33.1 bits (72), Expect = 0.30
Identities = 18/60 (30%), Positives = 29/60 (48%)
Query: 270 GSSDPSDSIFGVALMAAIGTALTMAILGFAFGWYTLSKRAKAAADVDYPAYGVTGPTVDS 329
GSS S S G+ + +AIG+ L + LG F Y KR + + + + G ++ S
Sbjct: 395 GSSSSSKSNLGLIVGSAIGSLLAVVFLGSCFVLYKKRKRGQDGHSKTWMPFSINGTSMGS 454
>At1g63780.1 68414.m07218 brix domain-containing protein contains
Pfam domain, PF04427: Brix domain
Length = 294
Score = 31.5 bits (68), Expect = 0.90
Identities = 19/70 (27%), Positives = 32/70 (45%), Gaps = 5/70 (7%)
Query: 86 LTKEIIHLNEMETDENDEKEFNDLITKNFMSRIMEVGSPVPKQVYSSGGSNKAEINLKHA 145
L KE I+ +E DE E K + ++ G P+P ++ + + EI+L+
Sbjct: 8 LKKEYIYRKSLEGDERKVYE-----QKRLIREALQEGKPIPTELRNVEAKLRQEIDLEDQ 62
Query: 146 NIPAPHSDIN 155
N P S I+
Sbjct: 63 NTAVPRSHID 72
>At1g51830.1 68414.m05843 leucine-rich repeat protein kinase,
putative similar to light repressible receptor protein
kinase GI:1321686 from [Arabidopsis thaliana]
Length = 675
Score = 31.5 bits (68), Expect = 0.90
Identities = 20/48 (41%), Positives = 27/48 (56%), Gaps = 2/48 (4%)
Query: 90 IIHLNEMETDENDEKEFNDLITKNFMSRIMEVGSP-VPKQVYSSGGSN 136
+I +MET+E+D ND+ ++RI G P VPKQ YS G N
Sbjct: 157 VIDFPQMETNEDDVTGINDVQNTYGLNRISWQGDPCVPKQ-YSWDGLN 203
>At4g27530.1 68417.m03954 expressed protein
Length = 130
Score = 31.1 bits (67), Expect = 1.2
Identities = 24/86 (27%), Positives = 42/86 (48%), Gaps = 3/86 (3%)
Query: 175 ITEKETKGFALTPFNKEYYEEQNISENTNETMPNDSVEIAE---LEALPKLEPRQIRQNP 231
IT ++ FA N E EE+ + T+ PN ++ A E L + I+++
Sbjct: 36 ITITNSRYFASHGNNGEKSEEEAMGTTTDGKAPNVTLGHAADTAKEGLKRATDAAIKKSG 95
Query: 232 NLGKAKALVADDLDKLKIGLYGDDGS 257
++GK K++ D+ D + GDDG+
Sbjct: 96 DVGKPKSVENDEGDDQEDVAVGDDGT 121
>At4g17850.1 68417.m02662 hypothetical protein
Length = 187
Score = 31.1 bits (67), Expect = 1.2
Identities = 23/87 (26%), Positives = 39/87 (44%), Gaps = 3/87 (3%)
Query: 163 PQSFNIPDEPKEITE-KETKGFALTPFNKEYYEE-QNISENTNETMPNDSVEIAELEALP 220
P S++ D KE+ E +E KG T K + N E +T ++ E+ P
Sbjct: 76 PDSWSCYDCTKEVDEMREEKGNEETSSRKRKADAVTNFFETAEKTSSQRQFDLLNTESYP 135
Query: 221 KLEPRQIRQNPNLGKAKALVADDLDKL 247
K+ + +PN+ K + D+DK+
Sbjct: 136 KIRNFDLNVDPNI-KLGEISGIDMDKV 161
>At2g30530.1 68415.m03718 expressed protein
Length = 371
Score = 31.1 bits (67), Expect = 1.2
Identities = 22/83 (26%), Positives = 35/83 (42%), Gaps = 7/83 (8%)
Query: 95 EMETDENDEKEFNDLITKNFMSRIMEVGSPVPKQVYSSGGSNKAEINLKHANIPAPHSDI 154
EMET+++ E+ ++ S SP P SS S+ A K + H D
Sbjct: 16 EMETEKDKERMMTPTTRMSYSSS----SSPSPSSASSSAASSLAA---KAIRASSAHRDS 68
Query: 155 NSARPIVQPQSFNIPDEPKEITE 177
+ + P S +P PKE+ +
Sbjct: 69 SLSSAYSSPSSAPVPTPPKEVNK 91
>At1g44970.1 68414.m05155 peroxidase, putative similar to peroxidase
GI:993004 from [Mercurialis annua]
Length = 346
Score = 30.3 bits (65), Expect = 2.1
Identities = 22/73 (30%), Positives = 36/73 (49%), Gaps = 3/73 (4%)
Query: 135 SNKAEINLKHANIPAPHSDINSARPIVQPQSFNIPDEPKEITEKETKGFA-LTPFNKEYY 193
S A +N + NIPAP+S I + + Q + N ++ ++ T G A T F + Y
Sbjct: 169 SRTASLNGANTNIPAPNSTIQNLLTMFQRKGLN-EEDLVSLSGGHTIGVARCTTFKQRLY 227
Query: 194 EEQNISENTNETM 206
QN + +ET+
Sbjct: 228 -NQNGNNQPDETL 239
>At1g79000.1 68414.m09212 p300/CBP acetyltransferase-related protein
2 (PCAT2) contains Pfam domains PF02135: TAZ zinc finger
and PF00569: Zinc finger, ZZ type; identical to cDNA
p300/CBP acetyltransferase-related protein 2
GI:12597460
Length = 1691
Score = 29.9 bits (64), Expect = 2.8
Identities = 20/79 (25%), Positives = 36/79 (45%), Gaps = 8/79 (10%)
Query: 153 DINSARPIVQPQSFNIPD-EPKEITEKETKGFALTPFNKEYYEEQNISENTNETMPNDSV 211
+I RP+ QP ++ D P + T K K E +++N++E+T T +
Sbjct: 842 NIPKQRPVSQPDKQDLSDVSPMQETTKVEK-------EPESLKKENLAESTEHTSKSGKP 894
Query: 212 EIAELEALPKLEPRQIRQN 230
EI + P Q+R++
Sbjct: 895 EIKGVSLTELFTPEQVREH 913
>At1g51820.1 68414.m05841 leucine-rich repeat protein kinase,
putative similar to light repressible receptor protein
kinase GI:1321686 from (Arabidopsis thaliana); contains
leucine rich repeat (LRR) domains, Pfam:PF00560;
contains protein kinase domain, Pfam:PF00069
Length = 885
Score = 29.9 bits (64), Expect = 2.8
Identities = 21/62 (33%), Positives = 32/62 (51%), Gaps = 7/62 (11%)
Query: 90 IIHLNEMETDENDEKEFNDLITKNFMSRIMEVGSP-VPKQVYSSGGSNKAEINLKHANIP 148
+I +MET+END ++ +SRI G P VPKQ+ G +N K+++I
Sbjct: 346 VIDFPQMETNENDVAGIKNVQGTYGLSRISWQGDPCVPKQLLWDG------LNCKNSDIS 399
Query: 149 AP 150
P
Sbjct: 400 TP 401
>At4g02140.1 68417.m00286 expressed protein
Length = 112
Score = 28.7 bits (61), Expect = 6.4
Identities = 16/60 (26%), Positives = 26/60 (43%), Gaps = 1/60 (1%)
Query: 17 IAKSPGATTAPTMPQTMNSGEEDKQIPSPMNYFRNVIIPKYMIPHYIKYVDKPGFLPQPI 76
++ S G T P + N G+E PS +V PK + + PGF+ +P+
Sbjct: 23 LSSSTGRTADPEI-HARNDGDEPSLFPSDPEGLDDVANPKTPADEDVPDIRPPGFVKEPL 81
>At1g08130.1 68414.m00892 DNA ligase / polydeoxyribonucleotide
synthase [ATP] identical to SP|Q42572 DNA ligase (EC
6.5.1.1) (Polydeoxyribonucleotide synthase [ATP])
{Arabidopsis thaliana}; contains Pfam profiles: PF01068
ATP dependent DNA ligase domain, PF04679 ATP dependent
DNA ligase C terminal region, PF04675 DNA ligase N
terminus
Length = 790
Score = 28.7 bits (61), Expect = 6.4
Identities = 32/141 (22%), Positives = 56/141 (39%), Gaps = 8/141 (5%)
Query: 142 LKHANIPAPHSDINSARPIVQPQSFNIPDEPKEITEKETKGFALTPFNKEYYEEQ--NIS 199
+ H + + H ++S+RP + + +T + +P ++ E Q N+
Sbjct: 36 ISHLRLSSCHRAMSSSRPSAFDALMSNARAAAKKKTPQTTNLSRSPNKRKIGETQDANLG 95
Query: 200 EN--TNETMPN--DSVEIAELEALPKLEPRQIRQNPNLG--KAKALVADDLDKLKIGLYG 253
+ + T+P D +E A P+ + I ++ G KAK L D K KIGL
Sbjct: 96 KTIVSEGTLPKTEDLLEPVSDSANPRSDTSSIAEDSKTGAKKAKTLSKTDEMKSKIGLLK 155
Query: 254 DDGSTNKPHHIHLLESGSSDP 274
+ P + E G P
Sbjct: 156 KKPNDFDPEKMSCWEKGERVP 176
>At5g40100.1 68418.m04864 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1017
Score = 28.3 bits (60), Expect = 8.4
Identities = 19/78 (24%), Positives = 37/78 (47%), Gaps = 1/78 (1%)
Query: 191 EYYEEQNISENTNETMPNDSVEIAELEALPKLEPRQIRQNPNLGKAKALVADDLDKLKIG 250
E+ E ++S N E +P D ++ L+ L ++++ P L + ++L + L+
Sbjct: 811 EFLENLDLSGNDFENLPEDMNRLSRLKTLCLRNCSKLKELPELTQVQSLTLSNCKNLRSL 870
Query: 251 LYGDDGSTNKPHHIHLLE 268
+ D S + P LLE
Sbjct: 871 VKISDASQD-PSLYSLLE 887
>At5g09840.1 68418.m01138 expressed protein contains Pfam profile
PF04396: Protein of unknown function, DUF537
Length = 924
Score = 28.3 bits (60), Expect = 8.4
Identities = 17/78 (21%), Positives = 31/78 (39%)
Query: 118 IMEVGSPVPKQVYSSGGSNKAEINLKHANIPAPHSDINSARPIVQPQSFNIPDEPKEITE 177
+ + S K + K+ N+ HA + D + K+ITE
Sbjct: 693 LSSIFSDSSKSQWQKQNGEKSGKNVAHAGVSVGSVDRKELERYKSNAIADCQKMIKKITE 752
Query: 178 KETKGFALTPFNKEYYEE 195
+ +G++L F K++ EE
Sbjct: 753 EHPEGYSLIRFRKDFLEE 770
>At4g30910.1 68417.m04389 cytosol aminopeptidase family protein
contains Pfam profiles: PF00883 cytosol aminopeptidase
family catalytic domain, PF02789: cytosol aminopeptidase
family N-terminal domain
Length = 581
Score = 28.3 bits (60), Expect = 8.4
Identities = 17/45 (37%), Positives = 22/45 (48%), Gaps = 2/45 (4%)
Query: 232 NLGKAKALVADDLDKLKIGLY--GDDGSTNKPHHIHLLESGSSDP 274
N+ A L + +LK+G Y S N PH IHL+ SS P
Sbjct: 296 NVMTANILKEEQCKELKMGSYLAVAAASANPPHFIHLIYKPSSGP 340
>At3g62680.1 68416.m07041 proline-rich family protein contains
proline-rich region, INTERPRO:IPR000694
Length = 313
Score = 28.3 bits (60), Expect = 8.4
Identities = 17/58 (29%), Positives = 23/58 (39%)
Query: 20 SPGATTAPTMPQTMNSGEEDKQIPSPMNYFRNVIIPKYMIPHYIKYVDKPGFLPQPIV 77
SP T PT+P + + K PSP Y + I P P K P +P +
Sbjct: 57 SPPVYTKPTIPPPVYTPPVYKHTPSPPVYTKPTIPPPVYTPPVYKPTLSPPVYTKPTI 114
>At3g20630.1 68416.m02610 ubiquitin-specific protease 14, putative
(UBP14) similar to ubiquitin-specific protease 14
GI:11993473 [Arabidopsis thaliana]
Length = 797
Score = 28.3 bits (60), Expect = 8.4
Identities = 24/98 (24%), Positives = 44/98 (44%), Gaps = 8/98 (8%)
Query: 55 PKYMIPHYIKYVDKPGFLPQPIVFTDSKPDLLTKEIIHLNEMETDENDEKEFNDLITKNF 114
P Y++ H K+V + G++P+ + PD++ +I H+ +E D + +
Sbjct: 550 PDYLVLHMRKFVMEEGWVPKKLDVYIDVPDVI--DISHMRSKGLQPGEEL-LPDGVPEEV 606
Query: 115 MSRIMEVGS-PVPKQVYSSGGS----NKAEINLKHANI 147
M V + + Q+ S G S KA IN +A +
Sbjct: 607 MESAQPVANEEIVAQLVSMGFSQLHCQKAAINTSNAGV 644
>At1g55150.1 68414.m06298 DEAD box RNA helicase, putative (RH20)
similar to ethylene-responsive RNA helicase GI:5669638
from [Lycopersicon esculentum]; contains Pfam profiles
PF00270: DEAD/DEAH box helicase, PF00271: Helicase
conserved C-terminal domain
Length = 501
Score = 28.3 bits (60), Expect = 8.4
Identities = 17/40 (42%), Positives = 22/40 (55%), Gaps = 5/40 (12%)
Query: 38 EDKQIPSPMNYFRNVIIPKYMIPHYIKYVDKPGFL-PQPI 76
E K IP P+ FR+V P Y+ ++ V K GF P PI
Sbjct: 90 EGKDIPKPVKSFRDVGFPDYV----LEEVKKAGFTEPTPI 125
Database: arabidopsis
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.313 0.131 0.377
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,974,392
Number of Sequences: 28952
Number of extensions: 417514
Number of successful extensions: 1004
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 15
Number of HSP's that attempted gapping in prelim test: 998
Number of HSP's gapped (non-prelim): 21
length of query: 361
length of database: 12,070,560
effective HSP length: 82
effective length of query: 279
effective length of database: 9,696,496
effective search space: 2705322384
effective search space used: 2705322384
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 60 (28.3 bits)
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