Silkworm BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000529-TA|BGIBMGA000529-PA|IPR006025|Peptidase M,
neutral zinc metallopeptidases, zinc-binding site, IPR000718|Peptidase
M13, neprilysin, IPR008753|Peptidase M13
         (761 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory recept...    28   0.21 
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    24   3.4  

>AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory receptor
           candidate 5 protein.
          Length = 522

 Score = 28.3 bits (60), Expect = 0.21
 Identities = 12/41 (29%), Positives = 21/41 (51%)

Query: 380 YVMWRVAGASVSYLTDDLRRRQLAYITALSGKTERESRWKE 420
           +++W + G        DL RR++A +  L+ K E + R  E
Sbjct: 251 FILWHIVGTFSGIFLCDLIRREIANVQVLAYKIEAKRRDNE 291


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 24.2 bits (50), Expect = 3.4
 Identities = 11/40 (27%), Positives = 17/40 (42%), Gaps = 4/40 (10%)

Query: 80  ETCSAPGCIHTASRLLLNMDEKVDPCDNFYDFACGSFLKN 119
           E C+ P C+        + +E + PC+  YD  C     N
Sbjct: 545 EDCNNPECLFDGR----DCEESLQPCNPIYDAYCQKHYAN 580


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.318    0.133    0.399 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 172,399
Number of Sequences: 317
Number of extensions: 7208
Number of successful extensions: 12
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 11
Number of HSP's gapped (non-prelim): 2
length of query: 761
length of database: 114,650
effective HSP length: 62
effective length of query: 699
effective length of database: 94,996
effective search space: 66402204
effective search space used: 66402204
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 47 (23.0 bits)