Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000529-TA|BGIBMGA000529-PA|IPR006025|Peptidase M,
neutral zinc metallopeptidases, zinc-binding site, IPR000718|Peptidase
M13, neprilysin, IPR008753|Peptidase M13
(761 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
09_06_0055 - 20550889-20551531,20551612-20551889,20552035-205522... 33 0.85
06_01_0591 + 4261483-4261631,4261837-4262007,4262127-4262226,426... 33 1.1
02_05_0210 - 26795630-26795757,26797987-26798617 32 1.5
07_01_1192 - 11313934-11314221,11314296-11314413,11317220-11317371 31 3.4
12_02_0953 - 24736642-24736673,24737104-24737188,24737267-247373... 30 6.0
11_06_0655 - 25923171-25923185,25923208-25923432,25923865-259243... 30 6.0
01_05_0117 - 18300157-18301106,18301149-18301543,18302592-183026... 30 6.0
05_07_0076 - 27520152-27520379,27520785-27521096,27521194-275213... 30 7.9
01_07_0344 - 42869465-42869502,42869597-42869771,42869923-428701... 30 7.9
>09_06_0055 -
20550889-20551531,20551612-20551889,20552035-20552203,
20552397-20552534,20553945-20553997,20554521-20554574,
20556062-20556295,20556399-20556986,20557065-20557419,
20557494-20557694,20557925-20557998,20558114-20558254,
20558611-20558670,20558750-20558806,20559281-20559318,
20559419-20559578
Length = 1080
Score = 33.1 bits (72), Expect = 0.85
Identities = 22/76 (28%), Positives = 33/76 (43%), Gaps = 4/76 (5%)
Query: 567 PAGILQGAFFSAKRPAYMNYGAIGFVIGHEITHGFDDQGRQFDKNGNLVDWWQEMTKEKY 626
P G+L FF P ++ +G I D D NGN+ W E+ KY
Sbjct: 571 PHGLL--TFFKLTHPLDKSWHVLGLGYNPSIDRSEIDNAAVVDYNGNMKP-WLELAMTKY 627
Query: 627 LDKAKCIIDQYSNYTV 642
D+ + I+D++ TV
Sbjct: 628 -DQVQTILDKFVGLTV 642
>06_01_0591 +
4261483-4261631,4261837-4262007,4262127-4262226,
4263151-4263315,4263416-4263544,4263758-4263858,
4264527-4264596,4265080-4265331,4265828-4265897,
4266281-4266341,4266916-4267003,4267746-4267830,
4268168-4268234,4268442-4268559,4268843-4268923,
4269022-4269267,4269670-4269771,4269847-4269914,
4270040-4270171,4270283-4270430,4270504-4270790,
4270920-4271067,4271156-4271331,4271407-4271518,
4271614-4271667,4273134-4273244,4273317-4273478,
4273627-4273814,4273948-4274137,4274297-4274464,
4274832-4274912
Length = 1359
Score = 32.7 bits (71), Expect = 1.1
Identities = 20/63 (31%), Positives = 32/63 (50%), Gaps = 4/63 (6%)
Query: 490 IAYPSEMLDNNRLTEFYSGLEMSSEHLME----SVLNLTLFTTEYLFGKLREPVNKTDWV 545
I+ E+L + R + YS + ++ L+E V +L +FT LF L P+N WV
Sbjct: 504 ISCAGELLAHIRTVKMYSWERLFTQRLVERRELEVKHLAVFTCVALFNTLIPPLNSFPWV 563
Query: 546 THG 548
+G
Sbjct: 564 ING 566
>02_05_0210 - 26795630-26795757,26797987-26798617
Length = 252
Score = 32.3 bits (70), Expect = 1.5
Identities = 24/79 (30%), Positives = 40/79 (50%), Gaps = 1/79 (1%)
Query: 359 PKYITDLEALLEKTPKRVQANYVMWRVAGASVSYLTDDLRRRQLAYITA-LSGKTERESR 417
P +T L L +P+ + A + R A+V ++D LRR Q A+I+A +SG + E+
Sbjct: 90 PSLVTSLLRSLSPSPRLLAATDRVDRRIRAAVPSISDRLRRVQEAFISAEVSGAADVEAF 149
Query: 418 WKECADTTSASMSIAVGAL 436
+E D + + G L
Sbjct: 150 LEELKDVALDANRLRRGVL 168
>07_01_1192 - 11313934-11314221,11314296-11314413,11317220-11317371
Length = 185
Score = 31.1 bits (67), Expect = 3.4
Identities = 20/65 (30%), Positives = 33/65 (50%), Gaps = 7/65 (10%)
Query: 573 GAFFSAKRP-AYMNYGAIGFVIGHEITHGFDDQGRQFDKNGNLV-----DWWQEMTKEKY 626
G F++AK A AIGF +GH++T + + +F + + D+W E+ K K
Sbjct: 23 GGFYAAKPELAARRIEAIGFQVGHQLTERYTMERPRFSDHLEAIKFICKDFWSELFK-KQ 81
Query: 627 LDKAK 631
+D K
Sbjct: 82 IDNLK 86
>12_02_0953 - 24736642-24736673,24737104-24737188,24737267-24737386,
24737484-24737549,24737629-24737799,24737901-24737999,
24738075-24738186,24738282-24738343,24738412-24738483,
24738583-24738681,24738764-24738997,24739104-24739178,
24739299-24739386,24739478-24739638,24739734-24739841,
24739934-24741922,24742007-24742279,24742957-24743295,
24743449-24745038,24745166-24745241,24745333-24745412,
24745614-24745679,24745761-24745830,24745899-24746134,
24746149-24746319,24746915-24747097,24747176-24747241,
24747326-24747389,24747472-24747530,24747612-24747699,
24747799-24747891,24747956-24748116,24748215-24748307,
24748405-24748518,24748654-24748773,24748852-24748935,
24749016-24749171,24749518-24750154,24752874-24752929
Length = 2815
Score = 30.3 bits (65), Expect = 6.0
Identities = 16/69 (23%), Positives = 34/69 (49%)
Query: 452 EMVNDIRQQFRKTLTKVDWMDDMTRQEALEKADAMASHIAYPSEMLDNNRLTEFYSGLEM 511
E+V Q ++ L +D +D +T + L + D S + D+N++ + L+
Sbjct: 1877 ELVQQKAQLQKQELMFIDALDGLTTEATLSRVDKDLGSAVIFSLLDDSNKIMIDFDNLKQ 1936
Query: 512 SSEHLMESV 520
+ + LME++
Sbjct: 1937 NKDELMENL 1945
>11_06_0655 -
25923171-25923185,25923208-25923432,25923865-25924324,
25924330-25924985
Length = 451
Score = 30.3 bits (65), Expect = 6.0
Identities = 32/122 (26%), Positives = 55/122 (45%), Gaps = 14/122 (11%)
Query: 422 ADTTSASMSIAVGALYIRKYFNENSKANAL--EMVNDIRQQFRKTLTKVDWMDDMTRQEA 479
A T S+ SI A+ FNE KA ++V ++ + + TK+D M + R A
Sbjct: 159 ATTASSVPSITSAAMVTSVPFNETKKAETDMDKVVENLDKTIQDLCTKIDRM--LERHFA 216
Query: 480 LEKADAMASHIAYPSE----------MLDNNRLTEFYSGLEMSSEHLMESVLNLTLFTTE 529
+A ++++ ++ M N+L + G +M+ E ME + T+FT
Sbjct: 217 TPSTEAGSTNLVDTAKLGMGTTIECSMKCENQLADDDDGKDMAKEEWMELMEVDTMFTAM 276
Query: 530 YL 531
YL
Sbjct: 277 YL 278
>01_05_0117 - 18300157-18301106,18301149-18301543,18302592-18302681,
18303723-18303836,18303903-18304046,18316147-18316312,
18316396-18317130,18317219-18317422,18317496-18318177,
18318272-18318528,18318604-18319298,18319345-18319382,
18319847-18319928,18320018-18320112,18320443-18320526,
18320601-18320891,18321521-18321853,18321948-18322150,
18322243-18322399,18322482-18322585,18322675-18322835,
18323511-18323824,18324317-18324589,18324666-18324967,
18325459-18325549,18326140-18326190,18326700-18326768,
18326926-18327017,18327082-18327148,18328582-18328746,
18329027-18329103,18329572-18329766,18330208-18330275,
18331081-18331172,18331399-18331522,18331608-18331705,
18332384-18332997,18333620-18333626
Length = 2892
Score = 30.3 bits (65), Expect = 6.0
Identities = 18/70 (25%), Positives = 29/70 (41%), Gaps = 6/70 (8%)
Query: 179 GVQPLLDMLKRLGGWPVLDGQSWD------ENSFSWEQSVYKFRDAGYSVDYFLDFSISV 232
GV P+ D WPV W ++ SW + V K R+ GYS+ + + V
Sbjct: 2500 GVDPVHDKFVINAVWPVRGQHGWQWRVVKVASTGSWRKFVSKVREKGYSLAIVVQKTTCV 2559
Query: 233 DVKNSTRRVI 242
D+ + +
Sbjct: 2560 DLSGESSHAV 2569
>05_07_0076 -
27520152-27520379,27520785-27521096,27521194-27521333,
27521893-27521956,27522071-27522277,27522350-27522493,
27522578-27522709,27522880-27524294,27524647-27524920,
27526096-27526129,27527028-27527059
Length = 993
Score = 29.9 bits (64), Expect = 7.9
Identities = 15/45 (33%), Positives = 21/45 (46%), Gaps = 1/45 (2%)
Query: 70 AVVARGSDDVETCSAPGCIHTASRLLLNMDEKVDPCDNFYDFACG 114
A + +D E C C H A +L ++DE + DNF F G
Sbjct: 131 AETSDSEEDQEECELTYCGH-AQNILSSLDESIGKIDNFLSFERG 174
>01_07_0344 -
42869465-42869502,42869597-42869771,42869923-42870117,
42870678-42870788,42870899-42871111,42871551-42871658,
42871732-42871873,42872150-42873449,42874032-42874085,
42874491-42874923
Length = 922
Score = 29.9 bits (64), Expect = 7.9
Identities = 18/91 (19%), Positives = 36/91 (39%)
Query: 367 ALLEKTPKRVQANYVMWRVAGASVSYLTDDLRRRQLAYITALSGKTERESRWKECADTTS 426
+LLE+ +Y + +AG V + D R + + E++ + E
Sbjct: 570 SLLEEFKSNKSKSYELSEIAGHVVEFSADQYGSRFIQQKLETASTEEKDMVFAEIMPQAL 629
Query: 427 ASMSIAVGALYIRKYFNENSKANALEMVNDI 457
M+ G ++K+F S A E+ + +
Sbjct: 630 TLMTDVFGNYVVQKFFEHGSSAQIKELADQL 660
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.133 0.399
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,156,596
Number of Sequences: 37544
Number of extensions: 867488
Number of successful extensions: 1849
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 1847
Number of HSP's gapped (non-prelim): 9
length of query: 761
length of database: 14,793,348
effective HSP length: 88
effective length of query: 673
effective length of database: 11,489,476
effective search space: 7732417348
effective search space used: 7732417348
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 64 (29.9 bits)
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