Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000528-TA|BGIBMGA000528-PA|IPR003890|Initiation factor
eIF-4 gamma, middle, IPR003891|Initiation factor eIF-4 gamma, MA3,
IPR003307|eIF4-gamma/eIF5/eIF2-epsilon
(1417 letters)
Database: tribolium
317 sequences; 114,650 total letters
Searching....................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY043293-2|AAK96034.1| 353|Tribolium castaneum homeodomain tran... 29 0.23
AF231104-1|AAF64149.1| 142|Tribolium castaneum labial protein p... 29 0.23
AF231103-1|AAF64148.1| 142|Tribolium castaneum labial protein p... 29 0.23
DQ659248-1|ABG47446.1| 496|Tribolium castaneum chitinase 8 prot... 27 0.91
AJ829922-1|CAH25640.1| 193|Tribolium castaneum twist bHLH trans... 26 1.6
EF125543-1|ABL73927.1| 475|Tribolium castaneum chitinase 4 prot... 26 2.1
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr... 25 2.8
X91618-1|CAA62821.1| 524|Tribolium castaneum hunchback protein. 25 3.7
DQ659249-1|ABG47447.1| 383|Tribolium castaneum chitinase 9 prot... 25 4.9
AF230313-1|AAF64147.1| 210|Tribolium castaneum labial protein p... 25 4.9
AF230312-1|AAF64146.1| 253|Tribolium castaneum labial protein p... 25 4.9
Z69735-1|CAA93623.1| 162|Tribolium castaneum initiation factor ... 24 6.4
AF322227-1|AAK01654.1| 782|Tribolium castaneum cell surface pro... 24 6.4
AY695257-1|AAW21974.1| 224|Tribolium castaneum intermediate neu... 24 8.5
>AY043293-2|AAK96034.1| 353|Tribolium castaneum homeodomain
transcription factor Labialprotein.
Length = 353
Score = 29.1 bits (62), Expect = 0.23
Identities = 18/76 (23%), Positives = 39/76 (51%), Gaps = 4/76 (5%)
Query: 687 SKLKVPADNPTRTDECV--NFRALIINKCQNQFQTDKSNEQVMKLEKE--MTECSDPAKK 742
S + + NP C+ N +++ C N +T+ +N+Q+ +LEKE + A++
Sbjct: 224 SSSALESPNPASRSSCLGSNTSSMLSLNCLNTGRTNFTNKQLTELEKEFHFNKYLTRARR 283
Query: 743 KEIQAMIQEEHRRIRM 758
EI + +Q ++++
Sbjct: 284 IEIASALQLNETQVKI 299
Score = 24.6 bits (51), Expect = 4.9
Identities = 22/102 (21%), Positives = 37/102 (36%), Gaps = 2/102 (1%)
Query: 177 MSGHNILTEICSNDNYVNDTNDRQTPQPEPTPNFAEEFNRRVYEVAKQPSDSVTKTNVTK 236
M GH+ +DNY N T+D Q P P+++ Y + V
Sbjct: 7 MYGHHSQHGTYPSDNYYNYTSDIPNAQQMP-PHYSNYHYEDPYGYTGSEETPPSPQEVYY 65
Query: 237 NVELPISSMSNVLSQSNAINYTNSGNNKSEIYSINESKILGP 278
+ + I + +++ ++YTN S IN P
Sbjct: 66 HHQ-TIPQDNPIINTETGLSYTNLDYGNSNFPPINHQNYNEP 106
Score = 24.2 bits (50), Expect = 6.4
Identities = 11/33 (33%), Positives = 15/33 (45%), Gaps = 2/33 (6%)
Query: 92 TRSSTHP--RYYPYVGYIPGYNTPPGHTPQYYY 122
++ T+P YY Y IP P H Y+Y
Sbjct: 12 SQHGTYPSDNYYNYTSDIPNAQQMPPHYSNYHY 44
>AF231104-1|AAF64149.1| 142|Tribolium castaneum labial protein
protein.
Length = 142
Score = 29.1 bits (62), Expect = 0.23
Identities = 18/76 (23%), Positives = 39/76 (51%), Gaps = 4/76 (5%)
Query: 687 SKLKVPADNPTRTDECV--NFRALIINKCQNQFQTDKSNEQVMKLEKE--MTECSDPAKK 742
S + + NP C+ N +++ C N +T+ +N+Q+ +LEKE + A++
Sbjct: 13 SSSALESPNPASRSSCLGSNTSSMLSLNCLNTGRTNFTNKQLTELEKEFHFNKYLTRARR 72
Query: 743 KEIQAMIQEEHRRIRM 758
EI + +Q ++++
Sbjct: 73 IEIASALQLNETQVKI 88
>AF231103-1|AAF64148.1| 142|Tribolium castaneum labial protein
protein.
Length = 142
Score = 29.1 bits (62), Expect = 0.23
Identities = 18/76 (23%), Positives = 39/76 (51%), Gaps = 4/76 (5%)
Query: 687 SKLKVPADNPTRTDECV--NFRALIINKCQNQFQTDKSNEQVMKLEKE--MTECSDPAKK 742
S + + NP C+ N +++ C N +T+ +N+Q+ +LEKE + A++
Sbjct: 13 SSSALESPNPASRSSCLGSNTSSMLSLNCLNTGRTNFTNKQLTELEKEFHFNKYLTRARR 72
Query: 743 KEIQAMIQEEHRRIRM 758
EI + +Q ++++
Sbjct: 73 IEIASALQLNETQVKI 88
>DQ659248-1|ABG47446.1| 496|Tribolium castaneum chitinase 8 protein.
Length = 496
Score = 27.1 bits (57), Expect = 0.91
Identities = 18/70 (25%), Positives = 30/70 (42%), Gaps = 2/70 (2%)
Query: 933 SKLKAVSQKGMPIKLAPHNSGWNHGSGTKNTAQAAGSSNSMISLTKNMYSILENVSTEPT 992
+KL A+ K +K GWN GS T +Q A + + K+ ++++ +
Sbjct: 84 AKLNALKVKNPNLKTLIAIGGWNEGSET--YSQVAADAAKRATFIKSALNLVQKWGFDGF 141
Query: 993 SLRGATPGNR 1002
L PG R
Sbjct: 142 DLDWEYPGQR 151
>AJ829922-1|CAH25640.1| 193|Tribolium castaneum twist bHLH
transcription factor protein.
Length = 193
Score = 26.2 bits (55), Expect = 1.6
Identities = 16/56 (28%), Positives = 24/56 (42%)
Query: 207 TPNFAEEFNRRVYEVAKQPSDSVTKTNVTKNVELPISSMSNVLSQSNAINYTNSGN 262
T + E F + PSD ++K K I + +VLS NA++ GN
Sbjct: 109 TQSLNEAFASLRKSIPTMPSDKLSKIQTLKLAARYIDFLYHVLSNENALDVDLIGN 164
>EF125543-1|ABL73927.1| 475|Tribolium castaneum chitinase 4 protein.
Length = 475
Score = 25.8 bits (54), Expect = 2.1
Identities = 23/88 (26%), Positives = 35/88 (39%), Gaps = 5/88 (5%)
Query: 918 DNNWKTTRTNFAVDTSKLK---AVSQKGMPIKLAPHNSGWNHGSGTKNTAQAAGSSNSMI 974
D+ K N V+ LK A+ K +K GWN GS N ++ A SS+
Sbjct: 62 DSRIKHLEPNLDVNQGNLKKFNALKLKNPNLKTLVAIGGWNEGS--VNYSKMAASSSLRA 119
Query: 975 SLTKNMYSILENVSTEPTSLRGATPGNR 1002
K++ ++ + L PG R
Sbjct: 120 VFIKSVVEFVKTWGFDGFDLDWEYPGQR 147
>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
protein protein.
Length = 1156
Score = 25.4 bits (53), Expect = 2.8
Identities = 21/88 (23%), Positives = 39/88 (44%), Gaps = 3/88 (3%)
Query: 260 SGNNKSEIYSINESKI--LGPDVAVETSETPILSAISDSPVIVPKMPMNVKQLQKNSDQS 317
SG+ S I S++ L P+ +E P+ S +P K P + K + + +
Sbjct: 806 SGSESSSISERCSSRVESLTPERKMEPPGVPLNSTPRSTPDKREKSPTSDKAQEADGEVV 865
Query: 318 IVLDTNENIPLKQHKSKNVP-QIEDFDK 344
+ + +E L+ H S + + ED D+
Sbjct: 866 VKKEVDEEERLENHTSVKIKREAEDRDE 893
>X91618-1|CAA62821.1| 524|Tribolium castaneum hunchback protein.
Length = 524
Score = 25.0 bits (52), Expect = 3.7
Identities = 14/44 (31%), Positives = 18/44 (40%)
Query: 220 EVAKQPSDSVTKTNVTKNVELPISSMSNVLSQSNAINYTNSGNN 263
+V + D T T V NVE+ S SN N GN+
Sbjct: 429 QVESEEEDEETSTTVFSNVEVVQEEAKKEESDSNNNNNKEEGNS 472
>DQ659249-1|ABG47447.1| 383|Tribolium castaneum chitinase 9
protein.
Length = 383
Score = 24.6 bits (51), Expect = 4.9
Identities = 15/66 (22%), Positives = 32/66 (48%), Gaps = 4/66 (6%)
Query: 919 NNWKTTRTNFAVDTSKLKAVSQKGMPIKLAPHNSGWNHGSGTKNT-AQAAGSSNSMISLT 977
++W+ T + + + L ++ +K +K+ GWN GS +T A++A +M+
Sbjct: 70 DDWEITGLD---EMNHLMSLREKNPDLKIILSMGGWNEGSYKYSTVAKSAALRATMVQSV 126
Query: 978 KNMYSI 983
N +
Sbjct: 127 LNFTDV 132
>AF230313-1|AAF64147.1| 210|Tribolium castaneum labial protein
protein.
Length = 210
Score = 24.6 bits (51), Expect = 4.9
Identities = 22/102 (21%), Positives = 37/102 (36%), Gaps = 2/102 (1%)
Query: 177 MSGHNILTEICSNDNYVNDTNDRQTPQPEPTPNFAEEFNRRVYEVAKQPSDSVTKTNVTK 236
M GH+ +DNY N T+D Q P P+++ Y + V
Sbjct: 7 MYGHHSQHGTYPSDNYYNYTSDIPNAQQMP-PHYSNYHYEDPYGYTGSEETPPSPQEVYY 65
Query: 237 NVELPISSMSNVLSQSNAINYTNSGNNKSEIYSINESKILGP 278
+ + I + +++ ++YTN S IN P
Sbjct: 66 HHQ-TIPQDNPIINTETGLSYTNLDYGNSNFPPINHQNYNEP 106
Score = 24.2 bits (50), Expect = 6.4
Identities = 11/33 (33%), Positives = 15/33 (45%), Gaps = 2/33 (6%)
Query: 92 TRSSTHP--RYYPYVGYIPGYNTPPGHTPQYYY 122
++ T+P YY Y IP P H Y+Y
Sbjct: 12 SQHGTYPSDNYYNYTSDIPNAQQMPPHYSNYHY 44
>AF230312-1|AAF64146.1| 253|Tribolium castaneum labial protein
protein.
Length = 253
Score = 24.6 bits (51), Expect = 4.9
Identities = 22/102 (21%), Positives = 37/102 (36%), Gaps = 2/102 (1%)
Query: 177 MSGHNILTEICSNDNYVNDTNDRQTPQPEPTPNFAEEFNRRVYEVAKQPSDSVTKTNVTK 236
M GH+ +DNY N T+D Q P P+++ Y + V
Sbjct: 7 MYGHHSQHGTYPSDNYYNYTSDIPNAQQMP-PHYSNYHYEDPYGYTGSEETPPSPQEVYY 65
Query: 237 NVELPISSMSNVLSQSNAINYTNSGNNKSEIYSINESKILGP 278
+ + I + +++ ++YTN S IN P
Sbjct: 66 HHQ-TIPQDNPIINTETGLSYTNLDYGNSNFPPINHQNYNEP 106
Score = 24.2 bits (50), Expect = 6.4
Identities = 11/33 (33%), Positives = 15/33 (45%), Gaps = 2/33 (6%)
Query: 92 TRSSTHP--RYYPYVGYIPGYNTPPGHTPQYYY 122
++ T+P YY Y IP P H Y+Y
Sbjct: 12 SQHGTYPSDNYYNYTSDIPNAQQMPPHYSNYHY 44
>Z69735-1|CAA93623.1| 162|Tribolium castaneum initiation factor
5-like protein protein.
Length = 162
Score = 24.2 bits (50), Expect = 6.4
Identities = 14/44 (31%), Positives = 21/44 (47%)
Query: 718 QTDKSNEQVMKLEKEMTECSDPAKKKEIQAMIQEEHRRIRMRSV 761
Q D NE + E ++ D + E QA + EE R RM+ +
Sbjct: 93 QVDDQNESLEASVNENSKNGDDDEGHEWQADVSEEAVRARMQDL 136
>AF322227-1|AAK01654.1| 782|Tribolium castaneum cell surface protein
chaoptin protein.
Length = 782
Score = 24.2 bits (50), Expect = 6.4
Identities = 9/18 (50%), Positives = 12/18 (66%)
Query: 1262 LQLMNTDESCECIKGWVQ 1279
L+LM SC+C GWV+
Sbjct: 701 LKLMGGKWSCDCDLGWVE 718
>AY695257-1|AAW21974.1| 224|Tribolium castaneum intermediate
neuroblasts defectiveprotein protein.
Length = 224
Score = 23.8 bits (49), Expect = 8.5
Identities = 11/26 (42%), Positives = 15/26 (57%)
Query: 361 SLLQPVSSFTNNIMGVHHNAPVQAVA 386
S L +S NN + HH AP++ VA
Sbjct: 45 SYLFSLSLAQNNQLFTHHKAPIRPVA 70
Database: tribolium
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 114,650
Number of sequences in database: 317
Lambda K H
0.313 0.129 0.373
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 306,576
Number of Sequences: 317
Number of extensions: 13125
Number of successful extensions: 57
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 42
Number of HSP's gapped (non-prelim): 23
length of query: 1417
length of database: 114,650
effective HSP length: 65
effective length of query: 1352
effective length of database: 94,045
effective search space: 127148840
effective search space used: 127148840
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 49 (23.8 bits)
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