Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000528-TA|BGIBMGA000528-PA|IPR003890|Initiation factor
eIF-4 gamma, middle, IPR003891|Initiation factor eIF-4 gamma, MA3,
IPR003307|eIF4-gamma/eIF5/eIF2-epsilon
(1417 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC17C9.03 |tif471||translation initiation factor eIF4G |Schizo... 122 5e-28
SPAP11E10.02c |mam3|SPAPB1A10.01c|cell agglutination protein Mam... 34 0.16
SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyce... 34 0.16
SPAC17A5.12 |ucp7||UBA/TPR/DNAJ domain protein Ucp7|Schizosaccha... 32 0.66
SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual 31 0.87
SPAC17H9.02 |||ATP-dependent RNA helicase Mtr4-like |Schizosacch... 31 1.2
SPBC1289.10c |||transcription factor |Schizosaccharomyces pombe|... 31 1.2
SPBC19G7.08c |||arrestin|Schizosaccharomyces pombe|chr 2|||Manual 31 1.2
SPCC162.08c |nup211||nuclear pore complex associated protein|Sch... 31 1.2
SPCC622.15c |||sequence orphan|Schizosaccharomyces pombe|chr 3||... 31 1.5
SPAC23D3.13c |||guanyl-nucleotide exchange factor|Schizosaccharo... 30 2.7
SPBC21D10.06c |map4||cell agglutination protein Map4|Schizosacch... 30 2.7
SPAC26F1.09 |gyp51||GTPase activating protein Gyp51 |Schizosacch... 30 2.7
SPAC14C4.04 |B22918-2||hypothetical protein|Schizosaccharomyces ... 30 2.7
SPBC29A10.03c |rlf2|SPBC365.19c|chromatin remodeling complex sub... 30 2.7
SPAC3G6.01 |hrp3||ATP-dependent DNA helicase Hrp3|Schizosaccharo... 29 3.5
SPAC688.07c |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 29 3.5
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 29 6.1
SPAC13F5.04c |||endosomal sorting protein |Schizosaccharomyces p... 29 6.1
SPBC20F10.08c |||conserved eukaryotic protein|Schizosaccharomyce... 29 6.1
SPCC825.01 |||ribosome biogenesis ATPase, Arb family |Schizosacc... 29 6.1
SPAC23H4.07c |srp102||signal recognition particle receptor beta ... 29 6.1
SPBC25D12.04 |suc22||ribonucleotide reductase small subunit Suc2... 29 6.1
SPAC12G12.09 |||sequence orphan|Schizosaccharomyces pombe|chr 1|... 28 8.1
SPAC1486.05 |nup189||nucleoporin Nup189|Schizosaccharomyces pomb... 28 8.1
SPAC19A8.01c |sec73|sec7c, SPAC23H3.01|guanyl-nucleotide exchang... 28 8.1
SPAC23C11.15 |pst2||Clr6 histone deacetylase complex subunit Pst... 28 8.1
SPBP19A11.02c |||sequence orphan|Schizosaccharomyces pombe|chr 2... 28 8.1
SPAC4A8.05c |myp2|myo3|myosin II heavy chain |Schizosaccharomyce... 28 8.1
>SPAC17C9.03 |tif471||translation initiation factor eIF4G
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1403
Score = 122 bits (293), Expect = 5e-28
Identities = 108/420 (25%), Positives = 184/420 (43%), Gaps = 48/420 (11%)
Query: 540 GKSSGLGSRSNTPRDIKREGRN-MTPSGRGSMKLPATASGSN--PHKPVIHVCLNDDVKL 596
G SG +S R + G M+ S RGS + G P + + ++ L
Sbjct: 916 GFGSGSNYKSAPSRGVSHHGHGGMSGSHRGSQRGSRRGGGERDKPDPSSLTIPVDQVAPL 975
Query: 597 NESDSAWRPTRYVR--AENADEEE---VKTQELYKKFRGILNKLTPQKFDTLLDKVKALD 651
S + W+P + AE E+E + + + +K +G LNK+T +KFD + D++ +
Sbjct: 976 QLSANRWQPKKLTEKPAETKGEDEEALLPPEVVQRKVKGSLNKMTLEKFDKISDQILEIA 1035
Query: 652 INNQKRLEG-----VIDLVFEKAIEEPNFSKAYAAMCHKLSKLKVPADNPTRTDECVN-- 704
+ ++K +G VI L FEKA +EPNFS YA K+ D+ R + ++
Sbjct: 1036 MQSRKENDGRTLKQVIQLTFEKATDEPNFSNMYARFARKMMD---SIDDSIRDEGVLDKN 1092
Query: 705 ---------FRALIINKCQNQFQTD-KSNEQVMKLEKEMTECSDPAKKKEIQAMIQEEHR 754
FR ++++CQ F+ K+N S A + EI +
Sbjct: 1093 NQPVRGGLLFRKYLLSRCQEDFERGWKANLP-----------SGKAGEAEIMSDEYYVAA 1141
Query: 755 RIRMRSVGNVRFIGELYKLKMLAVKIMEYCMNYLIDIXXXXXXXXXXXX---XTTIGEQI 811
I+ R +G VRFIGEL+KL ML+ KIM C+ L+ T+G I
Sbjct: 1142 AIKRRGLGLVRFIGELFKLSMLSEKIMHECIKRLLGNVTDPEEEEIESLCRLLMTVGVNI 1201
Query: 812 ENEPQDH--LDPIFKKMQDIVDRRSNKISSRVRFMIQDVIELRKRKWVTKSVIDTQPKMM 869
+ + H +D +M+ I + + SR++FM+ DV++ RK W K+ ++ PK +
Sbjct: 1202 DATEKGHAAMDVYVLRMETIT--KIPNLPSRIKFMLMDVMDSRKNGWAVKNEVEKGPKTI 1259
Query: 870 DQIQKEAEQQQRHIELMNANPMXXXXXXXXXXXXXXXXXXXQNTNPYMDNNWKTTRTNFA 929
+I +EAE+++ E + P + P+ ++W + +A
Sbjct: 1260 AEIHEEAERKKALAE--SQRPSSGRMHGRDMNRGDSRMGGRGSNPPFSSSDWSNNKDGYA 1317
>SPAP11E10.02c |mam3|SPAPB1A10.01c|cell agglutination protein
Mam3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1082
Score = 33.9 bits (74), Expect = 0.16
Identities = 31/100 (31%), Positives = 46/100 (46%), Gaps = 6/100 (6%)
Query: 201 TPQPEPTPNFAEEFNRRVYEVAKQPSDSVTKTN---VTKNVELPISSMSNVLSQSNAINY 257
TP P+ + + + V V+ +PSDS + TN +T +V P S S L+ S +I
Sbjct: 166 TPVFSPSASVSSKVASSVSYVSSEPSDSSSSTNTVILTTSVNSPAVSSSETLT-SVSITS 224
Query: 258 TNSGNNKSEIYSINESKILGPDVAVETSETPILSAISDSP 297
T S S + I S + V TSE + S +D P
Sbjct: 225 TESAYTSSSV-DIAASTTASSTLPVSTSEATV-SFSTDIP 262
Score = 28.7 bits (61), Expect = 6.1
Identities = 35/130 (26%), Positives = 59/130 (45%), Gaps = 14/130 (10%)
Query: 367 SSFTNN-IMGVHHNAP-VQAVAPVMSILTPVTVPAHSQTIV------TPTNTQGMCPSYL 418
SS TN I+ N+P V + + S+ T A++ + V T ++T + S
Sbjct: 194 SSSTNTVILTTSVNSPAVSSSETLTSVSITSTESAYTSSSVDIAASTTASSTLPVSTSEA 253
Query: 419 NTPQNQIIRETKERLKSEEQERIEY--DTTNLEKETSFTTIRSNGPASLV----ISSVDS 472
+ I T L S Y +T++ ++ FTT+ + +S++ I+SV S
Sbjct: 254 TVSFSTDIPATPSTLSSPASSSSSYLVETSSTLTDSVFTTVTATSDSSVITYTLINSVTS 313
Query: 473 LSNTTNPPTS 482
S TTN P+S
Sbjct: 314 SSETTNLPSS 323
>SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1036
Score = 33.9 bits (74), Expect = 0.16
Identities = 37/184 (20%), Positives = 56/184 (30%), Gaps = 7/184 (3%)
Query: 126 SPQLPSQNAQSNPPSRNNPTTLVGAQCXXXXXXXXXXXXXXXXXXXHIHPAMSGHNILTE 185
S LPS S P S N TT A ++S N T
Sbjct: 279 SSLLPSSTPSSTPLSSANSTTATSASSTPLTSVNSTTTTSASSTPL---SSVSSANSTTA 335
Query: 186 ICSNDNYVNDTNDRQTPQPEPTPNFAEEFNRRVYEVAKQPSDSVTKTNVTKNVELPISSM 245
++ ++ N TP + + P SV T+ T P++S
Sbjct: 336 TSTSSTPLSSVNSTTATSASSTP-LTSVNSTTATSASSTPLTSVNSTSATSASSTPLTSA 394
Query: 246 SNVLS---QSNAINYTNSGNNKSEIYSINESKILGPDVAVETSETPILSAISDSPVIVPK 302
++ S S A +Y S + S A S TP+ S S +
Sbjct: 395 NSTTSTSVSSTAPSYNTSSVLPTSSVSSTPLSSANSTTATSASSTPLSSVNSTTATSASS 454
Query: 303 MPMN 306
P++
Sbjct: 455 TPLS 458
Score = 28.7 bits (61), Expect = 6.1
Identities = 30/152 (19%), Positives = 49/152 (32%), Gaps = 4/152 (2%)
Query: 177 MSGHNILTEICSNDNYVNDTNDRQTPQPEPTPNFAEEFNRRVYEVAKQPSDSVTKTNVTK 236
+S N T ++ ++ N TP + + P SV T+ T
Sbjct: 441 LSSVNSTTATSASSTPLSSVNSTTATSASSTP-LTSVNSTTATSASSTPLTSVNSTSATS 499
Query: 237 NVELPISSMSNVLS---QSNAINYTNSGNNKSEIYSINESKILGPDVAVETSETPILSAI 293
P++S ++ S S A +Y S + S A S TP+ S
Sbjct: 500 ASSTPLTSANSTTSTSVSSTAPSYNTSSVLPTSSVSSTPLSSANSTTATSASSTPLTSVN 559
Query: 294 SDSPVIVPKMPMNVKQLQKNSDQSIVLDTNEN 325
S + P + ++ S TN N
Sbjct: 560 STTATSASSTPFGNSTITSSASGSTGEFTNTN 591
>SPAC17A5.12 |ucp7||UBA/TPR/DNAJ domain protein
Ucp7|Schizosaccharomyces pombe|chr 1|||Manual
Length = 697
Score = 31.9 bits (69), Expect = 0.66
Identities = 36/149 (24%), Positives = 58/149 (38%), Gaps = 21/149 (14%)
Query: 529 SRPSSDNFFPFGKSSGLGSRSNTPRD--------IKREGRNMT-PSGRGSMKLPATASGS 579
S P S N+ PF L SNTPRD I+ R ++ P S K+
Sbjct: 85 STPKSSNYDPFENLEILHQLSNTPRDKDAVIHDKIEENKRPISQPQVSASEKVTLKDLSL 144
Query: 580 NPHKPVIHVCLNDDVKLNESDSAWRPTRYVRAENADEEEVKTQELYKKFRGILNKLTPQK 639
PH+PV + +E+ + + N ++++ + E+Y+K R +
Sbjct: 145 EPHQPVSLPAFENIG--SETSIPFENHNEITNMNTAKDKLSSNEMYEKLRDL-------- 194
Query: 640 FDTLLDKVKALDINNQKRLEGVIDLVFEK 668
D L + N LE I+ + EK
Sbjct: 195 --GFSDDQSRLALENSGSLEDAIEYILEK 221
>SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1236
Score = 31.5 bits (68), Expect = 0.87
Identities = 25/88 (28%), Positives = 39/88 (44%), Gaps = 5/88 (5%)
Query: 400 HSQTIVTPTNTQGMCPSYLNTPQNQIIRETKERLKSEEQERIEYDTTNLEKETSFTTIRS 459
H+ T+ + T++ N N + L E + + TS T + S
Sbjct: 817 HAPTVSSTTSSSSTTSLAANKGVNS---NSITSLNLESTSSVTSTAYTTDSVTSTTALTS 873
Query: 460 NGPASLVISSVDSLSNTTNPPTSQKIIS 487
GP+S V+SS SLS+TT+ TS + S
Sbjct: 874 QGPSSSVVSS--SLSSTTSLSTSIPVTS 899
Score = 29.1 bits (62), Expect = 4.6
Identities = 25/95 (26%), Positives = 46/95 (48%), Gaps = 1/95 (1%)
Query: 204 PEPTPNFAEEFNRRVYEVAKQPSDSVTKTNVTKNVELPISS-MSNVLSQSNAINYTNSGN 262
P+ T + + E V S ++ T+ + ISS M++VLS S++I ++S +
Sbjct: 493 PQSTLSTSSEVVSEVSSTLLSGSSAIPSTSSSTPSSSIISSPMTSVLSSSSSIPTSSSSD 552
Query: 263 NKSEIYSINESKILGPDVAVETSETPILSAISDSP 297
S I +I+ + +S + ILS+ + SP
Sbjct: 553 FSSSITTISSGISSSSIPSTFSSVSSILSSSTSSP 587
Score = 28.3 bits (60), Expect = 8.1
Identities = 53/319 (16%), Positives = 116/319 (36%), Gaps = 14/319 (4%)
Query: 174 HPAMSGHNILTEICSNDNYVNDTNDRQTPQPEPTPNFAEEFNRRVYEVAKQPSDSVTK-- 231
H + G + I N + + +++ + V V+ +P+
Sbjct: 335 HDSSQGLESTSSIALNPTSSISSTSSSSSTSSAISTISQDHTKTVTSVSDEPTTITASGA 394
Query: 232 TNVTKNVELPISSMSNVLSQSNAINYTNSGNNKSEIYSINESKILGPDVAVETSETPILS 291
T+VT + +++ + ++ + ++ ++ S I S S + P A +T +S
Sbjct: 395 TSVTTTTKTDFDTVTTTIVSTSTL--ISASDSTSIIVSSYVSTVTQP--ASTRVQTTTVS 450
Query: 292 AISDSPVIVPKMPMNVKQLQKNSDQSIVLDTNENIPLKQHKSKNVPQIEDFDKXXXXXXX 351
+IS S V + +V + S + + P+ S + PQ
Sbjct: 451 SISTS---VKQPTASVASSSVSVPSSSSVQPQSSTPISSSSSASSPQ-STLSTSSEVVSE 506
Query: 352 XXXXXXXXTSLLQPVSSFTNNIMGVHHNAPVQAVAPVMSILTPVTVPAHSQTIVTPTNTQ 411
+S + SS T + + ++P+ +V S + + S +I T ++
Sbjct: 507 VSSTLLSGSSAIPSTSSSTPSSSII--SSPMTSVLSSSSSIPTSSSSDFSSSITTISS-- 562
Query: 412 GMCPSYLNTPQNQIIRETKERLKSEEQERIEYDTTNLEKETSFTTIRSNGPASLVISSVD 471
G+ S + + + + S + +++ S + S S ISS
Sbjct: 563 GISSSSIPSTFSSVSSILSSSTSSPSSTSLSISSSSTSSTFSSASTSSPSSISSSISSSS 622
Query: 472 SLSNTTNPPTSQKIISEES 490
++ ++ P TS +IS S
Sbjct: 623 TILSSPTPSTSSLMISSSS 641
>SPAC17H9.02 |||ATP-dependent RNA helicase Mtr4-like
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1030
Score = 31.1 bits (67), Expect = 1.2
Identities = 25/88 (28%), Positives = 44/88 (50%), Gaps = 8/88 (9%)
Query: 1230 EDNHFEFLEGDVKSSEEENKKILSPSQT-QDKLLQLMNTDESCECIKGWVQDKFGKSSNE 1288
+ +F+F EG +SS +E K +L ++T +D+ N++E E I +++ S N+
Sbjct: 7 DSKNFQFSEGSRESSNDELKVLLRDTETKEDEKSSFSNSEE--ESI---IENLSDSSVNK 61
Query: 1289 EWFMRS--LIQAICEHALFGPERRDVPH 1314
E+ S L A+ E P +D H
Sbjct: 62 EYAKNSLKLSDAVSESKYLNPLLKDKRH 89
>SPBC1289.10c |||transcription factor |Schizosaccharomyces pombe|chr
2|||Manual
Length = 743
Score = 31.1 bits (67), Expect = 1.2
Identities = 30/111 (27%), Positives = 46/111 (41%), Gaps = 9/111 (8%)
Query: 199 RQTPQPEPTPNFAEEFNRRVYEVAKQPSDSVTKTNVTKNVELPISSMSNVLSQSNAINYT 258
+QT PTPN + + R + + + T N P SS + S A+ +
Sbjct: 589 QQTHSSRPTPNASSPLDVRSKQKPSSANSNAPTPAPTVNTTNPESSTNEATSVGPALEPS 648
Query: 259 NSGN---NKSEIYSINESKILGPDVAVETSETPILSAISDSPVIVPKMPMN 306
N + SE+ + N+S PD TS TP SA ++S + K N
Sbjct: 649 QGANVHKSDSELDNQNQSGKSNPD----TSATP--SAPTESTTVATKSSDN 693
>SPBC19G7.08c |||arrestin|Schizosaccharomyces pombe|chr 2|||Manual
Length = 483
Score = 31.1 bits (67), Expect = 1.2
Identities = 22/81 (27%), Positives = 39/81 (48%), Gaps = 3/81 (3%)
Query: 175 PAMSGHNILTEICSN-DNYVNDTNDRQTPQPEPTPNFAEEFNRRVYEVAKQPSDSVTKTN 233
P+++ I+ S+ DN T++R TP P P P+ VY+ P SV+ T+
Sbjct: 121 PSLTSDWIVDSYASDQDNPSVHTHNRTTP-PIPPPHLPNASGSSVYQPPYTPFRSVSTTS 179
Query: 234 VTKNVEL-PISSMSNVLSQSN 253
+ + + P + +LS S+
Sbjct: 180 SSNDTSITPFGDQTPILSSSS 200
>SPCC162.08c |nup211||nuclear pore complex associated
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1837
Score = 31.1 bits (67), Expect = 1.2
Identities = 39/274 (14%), Positives = 109/274 (39%), Gaps = 7/274 (2%)
Query: 614 ADEEEVKTQELYKKFRGILNKLTPQKFDTLLDKVKALDINNQKRLEGVIDLVFEKAIEEP 673
A E+E+ + + Y NKL +FD+L ++ L N+ + L +L +A+++
Sbjct: 1141 AMEDEISSLKDYILGLENQNKLLHSQFDSLSQQITVLQQNSSENLNISANL---EAVQDN 1197
Query: 674 NFSKAYAAMCHKLSKLKVPADNPTRTDECVNFRALIINKCQNQFQTDKSNEQVMKLEKEM 733
+ + + + H+ + + + +N + + + Q + + Q + + +
Sbjct: 1198 DLRELVSYLRHEKEIMDNKYELTILDNRGLNQQVKSLQSTVDSLQLELNRLQSLPVSNDQ 1257
Query: 734 TECSDPAKKKEIQAMIQEEHRRIRMRSVGNVRFIGELYKLKMLAVKIMEYCMNYLIDIXX 793
T+ + +E+Q ++ E + +R N +G++ +L+ K+ +I
Sbjct: 1258 TDTPIISGSQEVQ-LLYESNSVLRK---DNDAKLGKIQELEKEVEKLNASLNPLQTEINE 1313
Query: 794 XXXXXXXXXXXTTIGEQIENEPQDHLDPIFKKMQDIVDRRSNKISSRVRFMIQDVIELRK 853
+ ++ + + + K + + + ++ + ++ EL
Sbjct: 1314 LKAEIGAKTASLNLMKEYNSRWKLRFQSVLNKYERVDPTQLEELKKNCEALEKEKQELET 1373
Query: 854 RKWVTKSVIDTQPKMMDQIQKEAEQQQRHIELMN 887
+ T DT + ++ + +E E ++ +E N
Sbjct: 1374 KLQETAKETDTFKQQVNSLNEEVENLKKEVEQAN 1407
>SPCC622.15c |||sequence orphan|Schizosaccharomyces pombe|chr
3|||Manual
Length = 557
Score = 30.7 bits (66), Expect = 1.5
Identities = 16/57 (28%), Positives = 26/57 (45%), Gaps = 1/57 (1%)
Query: 95 STHPRYYPYVGYIPGYNTPPGHTPQYYYTPNSPQLPSQNAQSNPPSRN-NPTTLVGA 150
S+HP +P ++ PPG P + N PS + Q PS + +P+ G+
Sbjct: 321 SSHPHMAFLPATVPTHSAPPGFVPYDFPITNDKMYPSPSFQEEFPSTSKSPSATPGS 377
>SPAC23D3.13c |||guanyl-nucleotide exchange factor|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1616
Score = 29.9 bits (64), Expect = 2.7
Identities = 26/131 (19%), Positives = 54/131 (41%), Gaps = 3/131 (2%)
Query: 1048 KKGSVKSMIDLCLIHAYYDEMIVEFKDVFKPENHAAVISEIFNIALDRSAKEIEMIVNIV 1107
K +K + D L Y ++ + + V K + + A + + I + +N +
Sbjct: 21 KNADLKKLADGSLKFLYTNKNLSQDSLVSKLKGNEAFYKPFLFCCAKKIERHIYISLNSI 80
Query: 1108 QLLVSTNTVSPDNLLEGMKETFDCAPDLFIDIPMLYNNLGKFVMPH--IEKKHITFVQLF 1165
QLL + +SPD +LE + + + L D + + + H K + LF
Sbjct: 81 QLLAINDALSPD-ILESLFNSLNAVIQLGQDSQLRVLQIIPIICTHYAASMKLPILISLF 139
Query: 1166 KLCNTIVSSNH 1176
++C + +S +
Sbjct: 140 RICFNLHNSKN 150
>SPBC21D10.06c |map4||cell agglutination protein
Map4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 948
Score = 29.9 bits (64), Expect = 2.7
Identities = 69/337 (20%), Positives = 118/337 (35%), Gaps = 31/337 (9%)
Query: 188 SNDNYVNDTNDRQTPQPEPTPNFAEEFNRRVYEVAKQPSDSVTKTNV---TKNV------ 238
S D V+ T TP PT + + V + S TNV T +V
Sbjct: 175 STDTSVSSTLTYHTPIASPTTSSNSDNEYTVDVITSSSLSSFVITNVDSTTTSVINYIGA 234
Query: 239 -ELPISSMSNVLSQSNAINY-TNSGNNKSEIYSINESKILGPDVAVETSETPILSAISDS 296
L SS++N +S + + Y T S + +I+ S TS + S S
Sbjct: 235 STLESSSLTNTVSPTESTFYETKSSTSSVPTQTIDSSSFTSSTPVSLTSSSTSSSGSSQD 294
Query: 297 PVIVPKMPMNV--KQLQKNSDQSIVLDT---NENIPLKQHKSKNVP-QIEDFDKXXXXXX 350
+ P + LQ + I + +P S + ++E F K
Sbjct: 295 STTIDSTPSTIATSTLQPTTSSPITTSAPSLSSALPTTYPSSLSTEVEVEYFTKTITDTS 354
Query: 351 XXXXXXXXXTSLLQPVSSFTNNIMGVHHN--APVQAVA------PV----MSILTPVTVP 398
+L + + ++ I + +N P+ + P+ LT T
Sbjct: 355 SIVTYSTGVETLYETETITSSEISSIIYNFSTPISGSSFPDGFKPINPTSFPSLTSSTKK 414
Query: 399 AHSQTIVTPTN-TQGMCPSYLNTPQNQIIRETKERLKSEEQERIEYDTTNLEKETSFTTI 457
S T+ T + PS N Q+ + + E E + + L +F++I
Sbjct: 415 IPSTTLPTSSKMITTTTPSVSNNTQSSFLIISTFTSSYEHSEPFKVSSVPL-TSNNFSSI 473
Query: 458 RSNGPASLVISSVDSLSNTTNPPTSQKIISEESTKNI 494
+ +SL I+ LSNTT + Q S + T ++
Sbjct: 474 SHSSASSLPITPSSYLSNTTLHSSVQSSQSSQFTVSV 510
>SPAC26F1.09 |gyp51||GTPase activating protein Gyp51
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1031
Score = 29.9 bits (64), Expect = 2.7
Identities = 19/87 (21%), Positives = 38/87 (43%), Gaps = 1/87 (1%)
Query: 202 PQPEPTPNFAEEFNRRVYEVAKQPSDSVTKTNVTKNVELPISSMSNVLSQSNAINYTNSG 261
P P+ +E++R + + T TN ++ + S++ +S N + NS
Sbjct: 87 PNEPEIPDMQDEYSRDSHSQQSVEEQNNT-TNTDEDASVNEFSVAADISDVNTLGKDNSE 145
Query: 262 NNKSEIYSINESKILGPDVAVETSETP 288
+ + + +NE+ LG + E S P
Sbjct: 146 STEEPVNEVNETATLGNEDVGERSGFP 172
>SPAC14C4.04 |B22918-2||hypothetical protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 267
Score = 29.9 bits (64), Expect = 2.7
Identities = 14/38 (36%), Positives = 20/38 (52%), Gaps = 2/38 (5%)
Query: 93 RSSTHPRYYPYVGYIPGYNTPPGHTPQYYYTPNSPQLP 130
+S+T P Y Y+ G + PP +T Y Y P S +P
Sbjct: 191 KSTTTPLYMERASYLFGASNPPAYT--YTYIPESKYVP 226
>SPBC29A10.03c |rlf2|SPBC365.19c|chromatin remodeling complex subunit
Rlf2 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 544
Score = 29.9 bits (64), Expect = 2.7
Identities = 14/52 (26%), Positives = 29/52 (55%), Gaps = 3/52 (5%)
Query: 1196 FVKSKWQESNLKLEQWMNEDQSLTRSYEQVSKWIEDNHFEFLEGDVKSSEEE 1247
+ K+ SN+ L W+ ED+ + +Y+ ++W+ D + D++S +EE
Sbjct: 317 YTKTHSHGSNVLLNPWL-EDEDIDYTYDSEAEWVADEEDD--GEDLESEDEE 365
>SPAC3G6.01 |hrp3||ATP-dependent DNA helicase Hrp3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1388
Score = 29.5 bits (63), Expect = 3.5
Identities = 17/66 (25%), Positives = 32/66 (48%)
Query: 431 ERLKSEEQERIEYDTTNLEKETSFTTIRSNGPASLVISSVDSLSNTTNPPTSQKIISEES 490
ER K EE++R+ + L++E ++ R N P S S T+ + ++++ +E
Sbjct: 935 EREKFEEEDRLREEEEALKQEIELSSRRGNRPYPSSAVESPSYSGTSERKSKKQMLKDEV 994
Query: 491 TKNIEI 496
EI
Sbjct: 995 LLEKEI 1000
>SPAC688.07c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1038
Score = 29.5 bits (63), Expect = 3.5
Identities = 40/182 (21%), Positives = 77/182 (42%), Gaps = 24/182 (13%)
Query: 175 PAMSGHNILTEICSNDNYVN--DTNDRQTPQPEPTPNFAEEFNRRVYEVAKQPSDSVTKT 232
P + L++ SND ++ D +PE P+ + +Y +KQPS + +
Sbjct: 470 PQQNPEEELSDSLSNDFGIDAEKEKDENLSKPEHHPSITSVNSPFLYSPSKQPSGELDEE 529
Query: 233 NVTKNVELPISSMSNVLSQSNAINYTNSGNNKSEIYSIN---------ESKILGPDVAVE 283
N+ + L S + + ++ ++ N+ N++ E + + S+IL A+
Sbjct: 530 NL--KLRLQDSDVDDEVATIRSLKQNNATNSEVETVTNDPSFSQQPGTHSRILRNFDAIS 587
Query: 284 TSETPILSAISDSPVIVP----------KMPMNVKQLQKNSDQSIVLDTNENIPLKQHKS 333
+ ++ I + SDS V +P K N LQ N+++ I E + +K S
Sbjct: 588 SIDS-IPDSFSDSAVDLPVDSSKYTLVGKTQSNSNLLQDNAEKHISKSNLEKVDVKGDTS 646
Query: 334 KN 335
N
Sbjct: 647 PN 648
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 28.7 bits (61), Expect = 6.1
Identities = 29/127 (22%), Positives = 48/127 (37%), Gaps = 6/127 (4%)
Query: 380 APVQAVAPVMSILTPVTV--PAHSQTIVTPTNTQGMCPSYLNTPQNQIIRETKERLKSEE 437
AP+ AVAPV + PA S P + P+ N P +I ++ S
Sbjct: 1450 APMHAVAPVQPKAPGMVTNAPAPSSAPAPPAPVSQLPPAVPNVPVPSMIPSVAQQPPSSV 1509
Query: 438 QERIEYDTTNLEKETSFTTIRSNGPASLVISSVDSLS----NTTNPPTSQKIISEESTKN 493
+T ++SF + S P + S +LS + + P S +E +
Sbjct: 1510 APATAPSSTLPPSQSSFAHVPSPAPPAPQHPSAAALSSAPADNSMPHRSSPYAPQEPVQK 1569
Query: 494 IEIVNKI 500
+ +N I
Sbjct: 1570 PQAINNI 1576
>SPAC13F5.04c |||endosomal sorting protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 277
Score = 28.7 bits (61), Expect = 6.1
Identities = 50/213 (23%), Positives = 73/213 (34%), Gaps = 13/213 (6%)
Query: 420 TPQNQIIRETKERLKSEE----QERIEYDTTNLEKETSFTTIRSNGPASLVISSVDSLSN 475
TP N E ++ + QE + ETSF ++ ASL IS S +
Sbjct: 44 TPSNHATEELQQSSTNSTTLPTQEAAVETNASASHETSFALPTTSPAASLSISPTKSAAV 103
Query: 476 TTNPPTSQKIISEESTKNIEIVNKIINQXXXXXXXXXXXXXXXMLEPLPFANISRPSS-- 533
++ P + S ST +N + L + +R SS
Sbjct: 104 SSEPNVEADVKSLSSTPAAPQLNS-PSHSYEPTTFPSTTSITENLPTIDPTRSTRSSSHI 162
Query: 534 DNFFPFGKSSGLGSRSNTPRDIKREGRNMTPSGRGSMK--LPATASG---SNPHKPVIHV 588
+ P K + G R +P I ++ PS S K L T + S P +P
Sbjct: 163 QSLSPESKQTSDGHRPPSPTSITTTSTSIDPSVAFSSKSTLATTRTNAPLSRPSQPTKAS 222
Query: 589 CLNDDVKLNESDSAWRPTRYVRAENADEEEVKT 621
LN L SA RY + D E+ T
Sbjct: 223 PLNKFSALEAIQSARSHARYAYSA-LDYEDTTT 254
>SPBC20F10.08c |||conserved eukaryotic protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 747
Score = 28.7 bits (61), Expect = 6.1
Identities = 23/79 (29%), Positives = 35/79 (44%), Gaps = 7/79 (8%)
Query: 181 NILTEICSNDNYVNDTNDRQTPQPEPTPNFAEEFNRRVYEVAKQPSDSVTKTNVTKNVEL 240
N++ E+ S + Y + + T E EE N + V SV N ++E
Sbjct: 432 NLINEVASQNKYSSTEISQITTNRE-----VEEENEEILLVLLNIISSVIGRNAELDLEN 486
Query: 241 PISSMSNVLSQSNAINYTN 259
PISS+ L Q + NY+N
Sbjct: 487 PISSLLPALEQLS--NYSN 503
>SPCC825.01 |||ribosome biogenesis ATPase, Arb family
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 822
Score = 28.7 bits (61), Expect = 6.1
Identities = 14/55 (25%), Positives = 29/55 (52%)
Query: 1205 NLKLEQWMNEDQSLTRSYEQVSKWIEDNHFEFLEGDVKSSEEENKKILSPSQTQD 1259
+L L++ +E ++ ++ SK +D +GD++SSE++ KK + D
Sbjct: 135 DLSLDEEESESSEKSKKKKKKSKSKDDGSEALDDGDIESSEKDKKKKKKSKENDD 189
>SPAC23H4.07c |srp102||signal recognition particle receptor beta
subunit Srp102 |Schizosaccharomyces pombe|chr 1|||Manual
Length = 227
Score = 28.7 bits (61), Expect = 6.1
Identities = 16/40 (40%), Positives = 23/40 (57%), Gaps = 4/40 (10%)
Query: 1202 QESNLKLEQWMNEDQSLTRSYEQVSKWIEDNHFEFLEGDV 1241
+E NL+LE ++ED +E V+ IED +FL G V
Sbjct: 174 EEKNLQLESIVSEDVD----WESVADQIEDTDLKFLPGSV 209
>SPBC25D12.04 |suc22||ribonucleotide reductase small subunit Suc22
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 391
Score = 28.7 bits (61), Expect = 6.1
Identities = 14/44 (31%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Query: 1325 SLIQDFGETKQIREAICLFGIQQLIHKLEHPQGLSLEIFQYLHD 1368
+L++ F QI EA C++G Q +I + H + SL + Y+ +
Sbjct: 141 NLLERFSSEVQIPEARCVYGFQIMIENI-HSETYSLLLDTYIRE 183
>SPAC12G12.09 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 977
Score = 28.3 bits (60), Expect = 8.1
Identities = 17/65 (26%), Positives = 33/65 (50%), Gaps = 3/65 (4%)
Query: 273 SKILGPDVAVET--SETPILSAISDSPVIVPKMPMNVKQLQKNSDQSIVLDTNENIPLKQ 330
+KI D+ T + + ++ S+ V + P +++ L N+DQS++L T ++
Sbjct: 243 NKIASCDLPYSTFYANSQVIDKFSEYFAYVDQDPCHIRVLNANTDQSLILYTQSDVK-NL 301
Query: 331 HKSKN 335
H KN
Sbjct: 302 HFGKN 306
>SPAC1486.05 |nup189||nucleoporin Nup189|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1778
Score = 28.3 bits (60), Expect = 8.1
Identities = 27/129 (20%), Positives = 47/129 (36%), Gaps = 5/129 (3%)
Query: 452 TSFTTIRSNGPASLVISSVDSLSNTTNPPTSQKIISEESTKNIEIVNKIINQXXXXXXXX 511
T+ T + G + V S+ ++++ T NPP + + T + I
Sbjct: 154 TTPATTNAFGTSGFVSSNANAVNGTANPPYAVTSEKDPQTNGTSVFQSITCMPAYRSYSF 213
Query: 512 XXXXXXXMLEPLPFANISRPSSDNFFPFGKSSGLGSRSNTP--RDIKREGRNMTPSGRGS 569
+ F N S S++ FG + G+ S TP +++ N TP G +
Sbjct: 214 EELRLQDYNQGRRFGNAS--STNTTSAFGSTPAFGA-STTPFGQNLSGTTNNATPFGTSN 270
Query: 570 MKLPATASG 578
SG
Sbjct: 271 ATNTTPGSG 279
>SPAC19A8.01c |sec73|sec7c, SPAC23H3.01|guanyl-nucleotide exchange
factor Sec73 |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1082
Score = 28.3 bits (60), Expect = 8.1
Identities = 15/49 (30%), Positives = 28/49 (57%)
Query: 606 TRYVRAENADEEEVKTQELYKKFRGILNKLTPQKFDTLLDKVKALDINN 654
TR V + + + K Q LY + R + ++L +F++ LDK +L+ +N
Sbjct: 859 TRVVILQALKKVDAKAQSLYLEIRKMESQLQVLRFESDLDKCISLESSN 907
>SPAC23C11.15 |pst2||Clr6 histone deacetylase complex subunit
Pst2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1075
Score = 28.3 bits (60), Expect = 8.1
Identities = 23/89 (25%), Positives = 38/89 (42%), Gaps = 6/89 (6%)
Query: 541 KSSGLGSRSNTPRDIKREGRNMTPSGRGSMKLPATASGSNPHKPVIHVCLNDDVKLNESD 600
+ SG S+SN+ + E N+TP + + PA A ++ P + D L D
Sbjct: 672 EESGNKSQSNSQNSLSDESGNVTPVSKKQLSQPAAAIKASLKYP-----SHPDSLLEHQD 726
Query: 601 SAWRPTRYVRAENADEEEVKTQELYKKFR 629
A T ++ D+E+ +Y FR
Sbjct: 727 HA-GDTENEMHDDVDKEQFGYSSMYVFFR 754
>SPBP19A11.02c |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 244
Score = 28.3 bits (60), Expect = 8.1
Identities = 27/119 (22%), Positives = 47/119 (39%), Gaps = 7/119 (5%)
Query: 192 YVNDTNDRQTPQPEPTPNFAE-EFNRRVYEVAKQPSDSVTKTNVTKNVELPISSMSNVLS 250
+ D TP P P+ N F+ E + + SVT TN+T V P +S ++ +
Sbjct: 26 FTTDVATTVTPTPLPSANVTTTSFSSASTETS---THSVTSTNITSIVPPPSTSHNSTTT 82
Query: 251 QSNAINYTNSGNNKSEIYSINESKILGP---DVAVETSETPILSAISDSPVIVPKMPMN 306
N+ S+N + P V T+ P + ++ + V+ P +N
Sbjct: 83 TVPPTTSMNTTTTVPPTTSLNTTTTTAPPTTHVNSTTTVVPPTTHVNTTTVVPPTTHVN 141
>SPAC4A8.05c |myp2|myo3|myosin II heavy chain |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 2104
Score = 28.3 bits (60), Expect = 8.1
Identities = 19/75 (25%), Positives = 39/75 (52%), Gaps = 10/75 (13%)
Query: 692 PADNPTRTDECVNFRALIINKCQNQFQTDK--------SNEQVMKLEKEMTECSDPAKKK 743
P T+TDE + + +IN QNQ ++ K + E+V++L ++ E A +K
Sbjct: 827 PLLGTTQTDEYLRRKDALINNLQNQLESTKEVANELTITKERVLQLTNDLQEEQALAHEK 886
Query: 744 EIQAMIQEEHRRIRM 758
+I +++ + R+ +
Sbjct: 887 DI--LVERANSRVEV 899
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.313 0.129 0.373
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,217,442
Number of Sequences: 5004
Number of extensions: 264492
Number of successful extensions: 800
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 24
Number of HSP's that attempted gapping in prelim test: 773
Number of HSP's gapped (non-prelim): 56
length of query: 1417
length of database: 2,362,478
effective HSP length: 82
effective length of query: 1335
effective length of database: 1,952,150
effective search space: 2606120250
effective search space used: 2606120250
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 60 (28.3 bits)
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