Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000528-TA|BGIBMGA000528-PA|IPR003890|Initiation factor
eIF-4 gamma, middle, IPR003891|Initiation factor eIF-4 gamma, MA3,
IPR003307|eIF4-gamma/eIF5/eIF2-epsilon
(1417 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_03_0860 + 22057309-22058453,22059833-22059964,22060328-220604... 164 5e-40
02_04_0585 - 24088344-24089366,24089833-24090075,24090305-240906... 125 2e-28
04_04_0397 - 24921892-24922947,24923486-24923734,24923807-249241... 120 8e-27
06_03_0247 + 18679278-18679319,18679522-18679620,18679897-186801... 77 8e-14
06_03_0253 + 18753901-18754278,18754873-18754968,18755167-187553... 75 5e-13
08_01_0141 - 1115794-1117584,1117803-1117897,1119557-1119821 42 0.004
04_04_0279 - 24109592-24111346,24111457-24111551,24113210-24113348 37 0.10
09_06_0295 + 22099791-22100030,22100681-22100797,22100886-22102616 36 0.18
05_01_0334 - 2642998-2643063,2643125-2643169,2643552-2643617,264... 36 0.23
11_04_0007 - 12074472-12074538,12074908-12075116,12077202-120774... 35 0.41
02_01_0717 + 5351504-5351602,5353401-5353499,5353574-5353675,535... 35 0.41
07_03_1067 + 23728642-23728690,23728832-23729010 33 1.2
03_05_0710 + 27038709-27038865,27039205-27039346,27039383-270395... 33 1.2
06_02_0085 + 11555539-11555632,11555767-11555867,11556947-115570... 33 1.7
05_06_0116 - 25719030-25719458,25720138-25720301,25720390-257206... 33 2.2
10_08_0825 + 20831170-20831349,20831380-20831547,20831627-208316... 32 2.9
02_05_1184 + 34802749-34802892,34802981-34803220,34803636-348039... 32 2.9
06_03_1511 - 30669292-30669401,30669894-30669930,30670012-306701... 32 3.8
08_01_0080 + 566509-566746,566904-567151,567347-567532,567639-56... 31 5.0
06_01_0493 - 3536207-3537056,3537603-3537826,3538234-3538503,353... 31 5.0
02_05_0280 + 27435166-27435254,27436348-27436437,27436764-274368... 31 5.0
12_02_1136 - 26381025-26381408,26381661-26381804,26382345-263824... 31 6.7
07_03_0629 - 20076676-20080390,20080508-20080576,20081335-20081660 31 6.7
06_01_0486 - 3455030-3455770 31 6.7
04_01_0058 + 592846-593185,594641-595182,596298-596987,597078-59... 31 6.7
02_03_0121 + 15468894-15468906,15469008-15469193,15474157-154746... 31 6.7
01_06_1210 + 35430143-35430796,35430912-35431004,35431397-354315... 31 6.7
12_02_0720 - 22510996-22512949,22513752-22514533 31 8.8
06_03_0493 + 21402536-21404599 31 8.8
03_03_0097 + 14386262-14386532,14387696-14387919,14388057-143883... 31 8.8
>07_03_0860 + 22057309-22058453,22059833-22059964,22060328-22060412,
22061666-22061867,22062273-22062344,22062509-22062573,
22062682-22062741,22063033-22064379,22064463-22064607,
22064688-22067442,22068540-22068630,22068655-22068873
Length = 2105
Score = 164 bits (398), Expect = 5e-40
Identities = 101/282 (35%), Positives = 164/282 (58%), Gaps = 21/282 (7%)
Query: 607 RYVRAENADEEEVKTQELYKKFRGILNKLTPQKFDTLLDKVKALDINNQKRLEGVIDLVF 666
+YV + +DEEE K ++L + ILNKLTPQ F+ L +KVK ++I+N L GVI +F
Sbjct: 1555 KYVVGKVSDEEEAKQRQL----KAILNKLTPQNFEKLFEKVKEVNIDNVATLTGVISQIF 1610
Query: 667 EKAIEEPNFSKAYAAMCHKLSKLKVPADNPTRTDECVNFRALIINKCQNQFQTDKSNEQV 726
+KA+ EP F + YA C L+ +P + + +E + F+ L++NKCQ +F+ + E
Sbjct: 1611 DKALMEPTFCEMYANFCFHLAG-ALP--DFSEDNEKITFKRLLLNKCQEEFERGEREE-- 1665
Query: 727 MKLEKEMTECSDPAKKKEIQAMIQEEHRRIRMRSVGNVRFIGELYKLKMLAVKIMEYCMN 786
E + TE + + K+ + +E+ R R R +GN+R IGELYK +ML +IM C+
Sbjct: 1666 --AEADKTE--EEGEIKQTKEEREEKRIRARRRMLGNIRLIGELYKKRMLTERIMHECIK 1721
Query: 787 YLI---DIXXXXXXXXXXXXXTTIGEQIEN-EPQDHLDPIFKKMQDIVDRRSNKISSRVR 842
L+ +TIGE I++ + ++H+D F M + S ++SSRVR
Sbjct: 1722 KLLGNYQNPDEENIEALCKLMSTIGEMIDHAKAKEHMDAYFDIMLKL--STSQQLSSRVR 1779
Query: 843 FMIQDVIELRKRKWVTKSVIDTQPKMMDQIQKEAEQQQRHIE 884
FM++D I+LRK KW + ++ PK +D++ ++A Q+RH +
Sbjct: 1780 FMLRDSIDLRKNKWQQRRKVE-GPKKIDEVHRDA-AQERHAQ 1819
>02_04_0585 -
24088344-24089366,24089833-24090075,24090305-24090655,
24090736-24090823,24091178-24091275,24091813-24092025,
24092150-24092245,24093124-24093195,24093909-24094067
Length = 780
Score = 125 bits (302), Expect = 2e-28
Identities = 81/266 (30%), Positives = 144/266 (54%), Gaps = 26/266 (9%)
Query: 622 QELYKKFRGILNKLTPQKFDTLLDKVKALDINNQKRLEGVIDLVFEKAIEEPNFSKAYAA 681
+ + K +GILNKLTP+KFD L ++ I L+ VI L+FEKA+ EP F YA
Sbjct: 205 ERVLKTVKGILNKLTPEKFDLLKGQLIEAGITTADILKDVISLIFEKAVLEPTFCPMYAQ 264
Query: 682 MCHKLS-KL-KVPADNPTRTDECVNFRALIINKCQNQFQ-TDKSNEQVMKLEKEMTECSD 738
+C L+ KL P++ P + + F+ +++N CQ F+ D +V KL
Sbjct: 265 LCFDLNEKLPSFPSEEPGGKE--ITFKRVLLNNCQEAFEGADNLRSEVNKL--------- 313
Query: 739 PAKKKEIQAMIQEEHRRIRMRSVGNVRFIGELYKLKMLAVKIMEYCMNYLID-----IXX 793
+E++ +++ R +++R++GN+R +GEL K KM+ KI+ + + L+
Sbjct: 314 TGLDQEMER--RDKERLVKLRTLGNIRLVGELLKQKMVPEKIVHHIVQELLGSESNRCPA 371
Query: 794 XXXXXXXXXXXTTIGEQIENEPQDHL--DPIFKKMQDIVDRRSNKISSRVRFMIQDVIEL 851
TIG+Q++ P+ D F +++D+ +++++SR+RFM +DV++L
Sbjct: 372 EENVEAICQFFNTIGKQLDENPKSRRFNDVYFNRLKDLT--TNSQLASRLRFMARDVLDL 429
Query: 852 RKRKWVTKSVIDTQPKMMDQIQKEAE 877
R +WV + + + K + +I +EAE
Sbjct: 430 RSNQWVPRRE-EMKAKKISEIHREAE 454
Score = 41.1 bits (92), Expect = 0.006
Identities = 30/119 (25%), Positives = 53/119 (44%), Gaps = 5/119 (4%)
Query: 1033 QPLNAPVPQEPISEAKKGSV-KSMIDLCLIHAYYDEMIVEFKDVFKPENHAAVISEIFNI 1091
QP AP P + K S+ K + L+H + I E K P+ + V+ E N+
Sbjct: 601 QPAAAPKPSSTELQKKTISLLKEYFHILLLHEA-QQCIEELKS---PDYYPEVVKEAINL 656
Query: 1092 ALDRSAKEIEMIVNIVQLLVSTNTVSPDNLLEGMKETFDCAPDLFIDIPMLYNNLGKFV 1150
ALD+ I+ ++ +++ L + N +L G +L ID+P + G+ +
Sbjct: 657 ALDKGTNSIDPLLRLLEHLYNKNVFKATDLETGCLLYSSLLDELAIDLPKAPVHFGEVI 715
>04_04_0397 -
24921892-24922947,24923486-24923734,24923807-24924157,
24924244-24924331,24924466-24924563,24925141-24925362,
24925490-24925585,24926410-24926481,24927156-24927305
Length = 793
Score = 120 bits (289), Expect = 8e-27
Identities = 80/262 (30%), Positives = 140/262 (53%), Gaps = 26/262 (9%)
Query: 626 KKFRGILNKLTPQKFDTLLDKVKALDINNQKRLEGVIDLVFEKAIEEPNFSKAYAAMCHK 685
K +GILNKLTP+KFD L ++ I L+ VI L+FEKA+ EP F YA +C
Sbjct: 209 KTVKGILNKLTPEKFDLLKGQLMESGITTADILKDVISLIFEKAVFEPTFCPMYAQLCSD 268
Query: 686 LS-KL-KVPADNPTRTDECVNFRALIINKCQNQFQTDKSNEQVMKLEKEMTECSDPAKKK 743
L+ KL P++ P + + F+ +++N CQ F+ +S L E+ + + P ++
Sbjct: 269 LNEKLPSFPSEEPGGKE--ITFKRVLLNNCQEAFEGAES------LRAEIAKLTGPDQEM 320
Query: 744 EIQAMIQEEHRRIRMRSVGNVRFIGELYKLKMLAVKIMEYCMNYLID-------IXXXXX 796
E +++ R +++R++GN+R IGEL K KM+ KI+ + + L+
Sbjct: 321 E----RRDKERIVKLRTLGNIRLIGELLKQKMVPEKIVHHIVQELLGSGPDKKACPEEEN 376
Query: 797 XXXXXXXXTTIGEQIENEPQDHL--DPIFKKMQDIVDRRSNKISSRVRFMIQDVIELRKR 854
TIG+Q++ P+ D F +M+++ + +++ R+RFM++DV++LR
Sbjct: 377 VEAICQFFNTIGKQLDENPKSRRINDTYFIQMKELT--TNLQLAPRLRFMVRDVVDLRSN 434
Query: 855 KWVTKSVIDTQPKMMDQIQKEA 876
WV + + + K + +I EA
Sbjct: 435 NWVPRRE-EIKAKTISEIHDEA 455
Score = 33.9 bits (74), Expect = 0.95
Identities = 18/73 (24%), Positives = 36/73 (49%)
Query: 1078 PENHAAVISEIFNIALDRSAKEIEMIVNIVQLLVSTNTVSPDNLLEGMKETFDCAPDLFI 1137
PE ++ ++ E N+ALD+ I+ +V +++ L + ++L G D+ I
Sbjct: 658 PEYYSEIVKEAINLALDKGPNFIDPLVRLLEHLHAKKIFKTEDLKTGCLLYAALLEDIGI 717
Query: 1138 DIPMLYNNLGKFV 1150
D+P+ G+ V
Sbjct: 718 DLPLAPALFGEVV 730
>06_03_0247 +
18679278-18679319,18679522-18679620,18679897-18680100,
18680334-18680431,18680554-18680641,18680728-18681078,
18682093-18682623
Length = 470
Score = 77.4 bits (182), Expect = 8e-14
Identities = 51/170 (30%), Positives = 89/170 (52%), Gaps = 14/170 (8%)
Query: 623 ELYKKFRGILNKLTPQKFDTLLDKVKALDINNQKRLEGVIDLVFEKAIEEPNFSKAYAAM 682
++ K +GILN LTP+KFD L D++ I L+ VIDL+ EKA+ EP YA
Sbjct: 141 KVLKTVKGILNLLTPEKFDILKDQLIEAGITRTDILKDVIDLILEKAVAEPTLCPMYAQF 200
Query: 683 CHKLSKLKVPADNPTRTD-ECVNFRALIINKCQNQFQTDKS-NEQVMKLEKEMTECSDPA 740
C L++ + A P T E + F+ + +KCQ F+ ++ + KL
Sbjct: 201 CSYLNE-NITAFPPKDTHCEQITFKQALSDKCQQAFEIARNVRADIYKL---------TG 250
Query: 741 KKKEIQAMIQEEHRRIRMRSVGNVRFIGELYKLKMLAVKIMEYCMNYLID 790
+++E++ +++ R ++ + +G +R I +L K KM+ KI+ + + D
Sbjct: 251 REQEMER--RDKERLVKHQILGKIRLIRDLLKQKMVPDKIVHHIAQAVTD 298
>06_03_0253 +
18753901-18754278,18754873-18754968,18755167-18755376,
18756028-18756093,18756379-18756576,18756616-18756810,
18756968-18757014,18757147-18757234,18757331-18757681,
18758593-18759123
Length = 719
Score = 74.5 bits (175), Expect = 5e-13
Identities = 47/170 (27%), Positives = 86/170 (50%), Gaps = 14/170 (8%)
Query: 623 ELYKKFRGILNKLTPQKFDTLLDKVKALDINNQKRLEGVIDLVFEKAIEEPNFSKAYAAM 682
E+ K + ILN +P+ FD ++ I++ L+ VI+L+FEK + EP F YA +
Sbjct: 390 EVLKTLKSILNTFSPKMFDLQKGQLIETRISSADILKDVINLIFEKVVAEPAFCSTYAQL 449
Query: 683 CHKLSKLKVPADNPTRTDECVNFRALIINKCQNQFQTDKSNEQVMKLEKEMTECSDPAK- 741
C L++ P E + F+ + NKCQ F E T CS+ K
Sbjct: 450 CTYLNQNLTPFPPEDCDCEEITFKQALSNKCQEIF------------ESAHTVCSEIGKL 497
Query: 742 -KKEIQAMIQEEHRRIRMRSVGNVRFIGELYKLKMLAVKIMEYCMNYLID 790
++ + +++ R +++ ++GN+ FI L K K++ KI+++ + ++D
Sbjct: 498 IGQDREMEQRDKERVVKLETLGNINFIRALLKKKLITNKIIDHIVQAVMD 547
>08_01_0141 - 1115794-1117584,1117803-1117897,1119557-1119821
Length = 716
Score = 41.9 bits (94), Expect = 0.004
Identities = 31/109 (28%), Positives = 54/109 (49%), Gaps = 2/109 (1%)
Query: 1042 EPISEAKKGSVKSMIDLCLIHAYYDEMIVEFKDVFKPENHAAVISEIFNIALDRSAKEIE 1101
E + KK +V SMI + E+I K++ PE + I ++ IA+DR +E E
Sbjct: 430 EKLRRYKKEAV-SMIHEYFLSDDVPEIIRSLKELGSPEYNPVFIKKLITIAMDRKNREKE 488
Query: 1102 MIVNIVQLLVSTNTVSPDNLLEGMKETFDCAPDLFIDIPMLYNNLGKFV 1150
M +I+ +S S +++++G + A D +DI + LG F+
Sbjct: 489 M-ASILLSSLSMELFSTEDIVKGFIMLLESAEDTALDILDASDELGLFL 536
>04_04_0279 - 24109592-24111346,24111457-24111551,24113210-24113348
Length = 662
Score = 37.1 bits (82), Expect = 0.10
Identities = 24/111 (21%), Positives = 54/111 (48%), Gaps = 1/111 (0%)
Query: 1067 EMIVEFKDVFKPENHAAVISEIFNIALDRSAKEIEMIVNIVQLLVSTNTVSPDNLLEGMK 1126
E+I+ +++ PE + + ++ +A+DR +E EM ++ L S S D++++G
Sbjct: 404 ELIISLQELSAPEYNPIFLKKLITLAMDRKNREKEMASALLSSL-SLELFSTDDIMKGFI 462
Query: 1127 ETFDCAPDLFIDIPMLYNNLGKFVMPHIEKKHITFVQLFKLCNTIVSSNHG 1177
A D +DI + L F+ + + + + L ++ N + ++ G
Sbjct: 463 LLLQSAEDTALDIVDAPSELALFLARAVIDEVLIPLNLDEIGNRLRPNSSG 513
>09_06_0295 + 22099791-22100030,22100681-22100797,22100886-22102616
Length = 695
Score = 36.3 bits (80), Expect = 0.18
Identities = 22/64 (34%), Positives = 28/64 (43%), Gaps = 6/64 (9%)
Query: 95 STHPRYYPYVGYIPGYNTPPGHTPQ------YYYTPNSPQLPSQNAQSNPPSRNNPTTLV 148
S + Y P +GY G PPGH PQ Y P PQ P N Q + +R + +
Sbjct: 258 SANHSYPPSMGYAYGCLPPPGHRPQDAIAGDVNYAPPYPQFPLPNEQGSATNRRDYYDVH 317
Query: 149 GAQC 152
QC
Sbjct: 318 CKQC 321
>05_01_0334 -
2642998-2643063,2643125-2643169,2643552-2643617,
2643625-2643730,2643770-2644349,2645780-2645871,
2645969-2646035,2646126-2646231,2646628-2646708,
2646789-2647058,2647158-2648788,2648834-2649385,
2650602-2651324,2651451-2651526
Length = 1486
Score = 35.9 bits (79), Expect = 0.23
Identities = 40/150 (26%), Positives = 66/150 (44%), Gaps = 15/150 (10%)
Query: 198 DRQTPQPEPTPNFAEE-FNRRVYEVAK----QPSD----SVTKTNVTKNVELPISSMSNV 248
+ +TPQ EP P+ F R V + K +PS+ S+ T + K+ S++
Sbjct: 816 NHETPQDEPRPSKKRRVFIRSVSDYVKYAKREPSNGRSTSLLSTIIKKSSAASHILNSSL 875
Query: 249 LSQSNAINYTNSGNNK--SEIYSINESKILGPDVAVETSETPILSAISDSPVIVPKMP-- 304
+ S +++SGN S + ++S D+ +TP SA SP+ P P
Sbjct: 876 SADSKTSGFSSSGNKHKGSHVEDASKSPRSNSDIHSSVLKTPSKSANELSPIFSPLNPSK 935
Query: 305 MNVKQLQKNS--DQSIVLDTNENIPLKQHK 332
+ + L K S + + LD + N QHK
Sbjct: 936 SSSRSLSKPSVGRELLTLDPDSNPSNCQHK 965
>11_04_0007 - 12074472-12074538,12074908-12075116,12077202-12077463,
12077547-12078043,12078651-12078719,12079258-12079363,
12080272-12080295,12081184-12081242,12081383-12081520
Length = 476
Score = 35.1 bits (77), Expect = 0.41
Identities = 21/93 (22%), Positives = 45/93 (48%), Gaps = 1/93 (1%)
Query: 1319 RMNKYASLIQDFGETKQIREAICLFGIQQLIHKLEHPQGLSLEIFQYLHDQYIISLDGFI 1378
++ +A L+ F + ++ E ++ +Q ++ L EI + L+DQ +++ D +
Sbjct: 385 QVKAWAGLLNAFCTSGRL-ELELIYKVQTQCYEDAKLMKLFPEIIRTLYDQDVLAEDTIL 443
Query: 1379 AWWESDKEPEGKGVMMKALTSFFMSIKAEVENE 1411
W+ P+G+ +KAL F ++ E E
Sbjct: 444 LWFRKGSNPKGRQSFVKALEPFVKWLEEAEEEE 476
>02_01_0717 +
5351504-5351602,5353401-5353499,5353574-5353675,
5353756-5353815,5353900-5354006,5354114-5354196,
5354372-5354462,5354561-5354768
Length = 282
Score = 35.1 bits (77), Expect = 0.41
Identities = 40/174 (22%), Positives = 80/174 (45%), Gaps = 21/174 (12%)
Query: 595 KLNESDSAWRPTRYVRAENADEEEVKTQELYKKFRGILNKLTPQKFDTLLDKVKALDINN 654
K+ E+D +Y +D E+ ++LY KF+G +N+L F +++ LD
Sbjct: 120 KVTEADIEEFEAKY---RGSDSEKKDLKDLYTKFKGNMNRL----FCSMICSDPKLD--- 169
Query: 655 QKRLEGVIDLVFEKAIEEPNFSKAYAAMCHKLSKLKVPAD--------NPTRTDECVNFR 706
R + +ID + E +KAY K+S+++ P + N +++E
Sbjct: 170 SHRFKDIIDEAIAEG--ELKSTKAYDKWAKKISEIEPPTNPLERRVKKNKKKSEENDLIL 227
Query: 707 ALIINKCQNQFQTDKSNEQVM-KLEKEMTECSDPAKKKEIQAMIQEEHRRIRMR 759
A+ + Q + + D +M K + + + S+P +++ QA + E +R + R
Sbjct: 228 AISQRRAQRKDRFDSVLSSIMSKCDPKGSSSSEPTEEEFEQARQRLEKKRSKNR 281
>07_03_1067 + 23728642-23728690,23728832-23729010
Length = 75
Score = 33.5 bits (73), Expect = 1.2
Identities = 20/45 (44%), Positives = 22/45 (48%), Gaps = 2/45 (4%)
Query: 98 PRYYPYVGYIPGYNTPP-GHTPQYYYTPNSPQLPSQNAQ-SNPPS 140
P YP GY P PP G+ PQ Y P Q P Q Q S+ PS
Sbjct: 26 PPGYPPAGYPPAQGYPPAGYPPQQGYPPPYAQPPPQQQQHSSGPS 70
>03_05_0710 +
27038709-27038865,27039205-27039346,27039383-27039558,
27039639-27039703,27040000-27040371,27040429-27040504,
27040505-27040571,27040672-27040825,27041122-27041289,
27041392-27041502,27041612-27041722,27041864-27041881,
27041917-27042018,27042587-27042817,27043390-27043464,
27043744-27043815,27044597-27044782,27044868-27045026,
27045251-27045343,27045730-27045801,27046336-27046426,
27046669-27046847,27047252-27047333,27047526-27047636,
27047715-27047821,27048194-27048271,27048357-27048452,
27048627-27048722,27048839-27048856
Length = 1154
Score = 33.5 bits (73), Expect = 1.2
Identities = 22/88 (25%), Positives = 40/88 (45%), Gaps = 4/88 (4%)
Query: 257 YTNSGNNKSEIYSINESKILGPDVAVETSETPILSAISDSPVIVPKMPMNVKQLQKNSDQ 316
Y N+ E + + + + GP A E P + AI+ SPV++P ++ + +S
Sbjct: 179 YVNNSGTVEEFFLLTKPEYSGPAPA---REPPPVPAIAPSPVVIPAPIVDPPPVAVHSPV 235
Query: 317 SIV-LDTNENIPLKQHKSKNVPQIEDFD 343
S L +++ K + IEDF+
Sbjct: 236 STTNLSKSQSFDSPTEKELTIDDIEDFE 263
>06_02_0085 +
11555539-11555632,11555767-11555867,11556947-11557056,
11557152-11557227,11557412-11557555,11558432-11558503,
11558601-11559470
Length = 488
Score = 33.1 bits (72), Expect = 1.7
Identities = 16/40 (40%), Positives = 20/40 (50%), Gaps = 2/40 (5%)
Query: 101 YPYVGYIPGYNTPPGHTPQYYYTPNSPQLP--SQNAQSNP 138
YP+ + P Y P HT Q YY+ +P P N QS P
Sbjct: 330 YPHTYHQPPYTIEPQHTSQNYYSTETPAAPYNYSNFQSYP 369
>05_06_0116 -
25719030-25719458,25720138-25720301,25720390-25720643,
25720727-25720782,25721032-25721169,25721315-25721421,
25721502-25721681,25721757-25721852,25721926-25722007,
25722084-25722425,25722666-25722695,25722788-25722880,
25722963-25723040,25723122-25723222,25723833-25724058,
25724647-25724760,25724855-25725009,25725515-25725554
Length = 894
Score = 32.7 bits (71), Expect = 2.2
Identities = 18/57 (31%), Positives = 30/57 (52%)
Query: 829 IVDRRSNKISSRVRFMIQDVIELRKRKWVTKSVIDTQPKMMDQIQKEAEQQQRHIEL 885
I+ +KI + + QDV L K K ++++ I + K M+ + EQQ + IEL
Sbjct: 277 IIKEEKSKIEEKRKLGEQDVARLMKEKEISENTIASLKKEMEVMTSMHEQQLQKIEL 333
>10_08_0825 +
20831170-20831349,20831380-20831547,20831627-20831698,
20831997-20832075,20832182-20832375,20832469-20832558,
20832851-20832940,20833196-20833282,20833477-20833560,
20833690-20833809,20834096-20834103,20834443-20834575,
20835044-20835125,20835330-20835496,20836006-20836493,
20836551-20836638,20836716-20836818,20836932-20837083,
20837191-20837316,20837459-20837529,20837691-20837753,
20838418-20838490,20838972-20839040,20839180-20839257,
20839434-20839484,20839586-20839696
Length = 1008
Score = 32.3 bits (70), Expect = 2.9
Identities = 22/89 (24%), Positives = 41/89 (46%), Gaps = 3/89 (3%)
Query: 365 PVSSFTNNIMGVHH--NAPVQAVAPVMSILTPVTVPAHSQTIVTPTNTQGMCPSYLNTPQ 422
P SS ++++ V P +A A + +P H + I P+N++ + Y + PQ
Sbjct: 44 PPSSISHSVYPVLDPIEVPARAAAAAAAARAIAGLPPHEK-ISLPSNSEDLVSIYGSNPQ 102
Query: 423 NQIIRETKERLKSEEQERIEYDTTNLEKE 451
+ E +E EE + I+Y ++ E
Sbjct: 103 GHAVDELEEVFFQEEFDPIKYILQSIPAE 131
>02_05_1184 + 34802749-34802892,34802981-34803220,34803636-34803950,
34804030-34804209,34804312-34804504,34805062-34805324,
34805461-34805590,34805719-34805786,34805951-34806199,
34806284-34806357,34808052-34808143,34808603-34808685,
34810337-34810408,34810558-34810683,34810996-34811037
Length = 756
Score = 32.3 bits (70), Expect = 2.9
Identities = 23/100 (23%), Positives = 44/100 (44%), Gaps = 2/100 (2%)
Query: 1318 DRMNKYASLIQDFGETKQIREAICLFGIQQLIHKLEHPQGLSLEIFQYLHDQYIISLDGF 1377
+ + K+ L++++ ++ I L + + L +I YL+D+ ++S D
Sbjct: 658 EALGKWKDLLRNYTKSVDEEMEILLKFEEMCQENTKEFSPLFSKILPYLYDKEVVSEDAI 717
Query: 1378 IAW-WESDKEPEGKGVMMKALTSFFMSIKAEVENEDSCSE 1416
+ W E + E V +K +F +K E E ED E
Sbjct: 718 LRWAEEKENADESDKVFVKQSEAFIQWLK-EAEEEDEEEE 756
>06_03_1511 - 30669292-30669401,30669894-30669930,30670012-30670107,
30670186-30670281,30670679-30670828,30670956-30671100,
30671178-30671251,30671325-30671445,30671697-30671821,
30671898-30672047,30672249-30672324,30672496-30672557,
30672597-30672839,30673354-30673683,30673776-30673932,
30674008-30674139,30674219-30674277,30674734-30674798,
30674878-30675094,30675413-30675499,30675655-30675750,
30675938-30676003,30676096-30676287,30676380-30676532,
30676812-30677052,30677322-30677515,30678212-30678348,
30678474-30678480,30678708-30678830,30679370-30679427,
30680018-30680090,30680493-30681765
Length = 1714
Score = 31.9 bits (69), Expect = 3.8
Identities = 23/71 (32%), Positives = 35/71 (49%), Gaps = 3/71 (4%)
Query: 433 LKSEEQERIEYDTTNL--EKETSFTTIRSNGPASLVISSVDSLSNTTNPPTSQKIISEES 490
L SE + E T L +K ++ RS+ PAS +VD L + P S K+I + S
Sbjct: 1067 LPSELDMKAEVATAKLWMDKCQAYLRPRSDKPASGGFLNVDDLKDLIGQPASMKVILDTS 1126
Query: 491 TKNIEIVNKII 501
N ++N +I
Sbjct: 1127 AIN-SVLNNVI 1136
>08_01_0080 +
566509-566746,566904-567151,567347-567532,567639-567734,
567836-567907,567990-568106,570531-571676
Length = 700
Score = 31.5 bits (68), Expect = 5.0
Identities = 15/42 (35%), Positives = 20/42 (47%), Gaps = 3/42 (7%)
Query: 108 PGYNTPPGHTPQYYYTPNSPQLPSQNAQSNPPSRNNPTTLVG 149
PGY PP + P Y S Q P+Q+ + PP+ P G
Sbjct: 648 PGYTQPPTNPPAY---DQSAQPPAQSGYAAPPANPQPAVAKG 686
>06_01_0493 -
3536207-3537056,3537603-3537826,3538234-3538503,
3539042-3539146
Length = 482
Score = 31.5 bits (68), Expect = 5.0
Identities = 23/58 (39%), Positives = 30/58 (51%), Gaps = 6/58 (10%)
Query: 97 HPRYYP-YVGYIPGYNTPPGHTPQYYYTPNSPQL--PSQNAQSNPPSRNNPTTLVGAQ 151
+P YYP Y GY+P P PQ Y P P L P+Q +Q++ + P TL AQ
Sbjct: 418 YPPYYPPYGGYMPPPRMPYPPPPQ--YPPYQPMLATPAQ-SQASSSQQPAPATLHQAQ 472
>02_05_0280 +
27435166-27435254,27436348-27436437,27436764-27436866,
27437318-27437377,27437745-27439148,27439227-27439328,
27439424-27439609,27439695-27439820,27439905-27440000,
27440509-27440574
Length = 773
Score = 31.5 bits (68), Expect = 5.0
Identities = 24/100 (24%), Positives = 42/100 (42%), Gaps = 4/100 (4%)
Query: 547 SRSNTPRDIKREGRNMTPSGRGSMKLPATASGSNPHKPVIHVCLNDDVKLNESDSAWRPT 606
S S+T + M P G++ + S + H V V ++VK+ + + RP
Sbjct: 496 SGSDTSEHVPNGSSKMIPLSLGALSMDDCCSLNTAHSKVSQVKRPEEVKVVKKRA--RPG 553
Query: 607 RYVRAENADEEEVKTQELYKKFRGILNKLTPQKFDTLLDK 646
R D +++ Q+ K+ R I+ D LLD+
Sbjct: 554 ESTRPRPKDRQQI--QDRVKELREIVPNSAKCSIDALLDR 591
>12_02_1136 -
26381025-26381408,26381661-26381804,26382345-26382413,
26382537-26382637,26383488-26383493,26383759-26383996
Length = 313
Score = 31.1 bits (67), Expect = 6.7
Identities = 19/53 (35%), Positives = 27/53 (50%), Gaps = 2/53 (3%)
Query: 391 ILTPVTV-PAHSQTIVTPTNTQGMCPSYLNTPQ-NQIIRETKERLKSEEQERI 441
+L+P V P S I+ P N P Y+N Q + IIR R K+E + R+
Sbjct: 129 LLSPYGVRPTPSGRILIPPNMPADAPIYVNAKQCSAIIRRRHARAKAERENRL 181
>07_03_0629 - 20076676-20080390,20080508-20080576,20081335-20081660
Length = 1369
Score = 31.1 bits (67), Expect = 6.7
Identities = 15/63 (23%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Query: 1322 KYASLIQDFGETKQIREAICLFGIQQLIHKLEHPQGLSLEIFQYLHDQYIISLDGFIAWW 1381
++ S++ GE ++++ + LFG+ + H + G + IF YL + + L + W
Sbjct: 1026 RWLSVLPPLGELPRLKK-LSLFGLSSITHINDQVYGTNDVIFPYLEELHFSELFSWEQWS 1084
Query: 1382 ESD 1384
E++
Sbjct: 1085 EAE 1087
>06_01_0486 - 3455030-3455770
Length = 246
Score = 31.1 bits (67), Expect = 6.7
Identities = 20/58 (34%), Positives = 23/58 (39%), Gaps = 3/58 (5%)
Query: 91 TTRSSTHPRYYPYVG-YIPGYNTPPG--HTPQYYYTPNSPQLPSQNAQSNPPSRNNPT 145
T R P Y P Y+P Y PP + P Y P P +P S PP PT
Sbjct: 83 TPRPPPTPPYVPSPPPYVPPYIPPPTPPYVPPYIPPPTPPYVPPPTPPSPPPYVPPPT 140
>04_01_0058 +
592846-593185,594641-595182,596298-596987,597078-597233,
597277-597856,598601-598764,598907-599100,599702-599750,
599777-599806
Length = 914
Score = 31.1 bits (67), Expect = 6.7
Identities = 19/65 (29%), Positives = 35/65 (53%), Gaps = 3/65 (4%)
Query: 200 QTPQPEPTPNFAEEFNRRVYEVAKQPSDSVTKTNVTKNVELPISSMSNVLSQSNAINYTN 259
++PQ EP P+ A + + + +VAK+ SD++ + T LP+S + S + +
Sbjct: 653 ESPQVEPKPSSANDCDNPISQVAKRASDNIRGHSST---VLPVSLNNTNEPCSISSQEAS 709
Query: 260 SGNNK 264
+GN K
Sbjct: 710 AGNTK 714
>02_03_0121 +
15468894-15468906,15469008-15469193,15474157-15474650,
15475090-15475521,15475597-15475821,15476065-15476346,
15476432-15476704,15477680-15477805,15481010-15481288,
15481313-15481588,15481670-15482113,15482200-15482397,
15482574-15482732,15482832-15483085,15483164-15483316,
15483395-15483683,15483769-15483807,15483913-15483951
Length = 1386
Score = 31.1 bits (67), Expect = 6.7
Identities = 15/42 (35%), Positives = 21/42 (50%)
Query: 607 RYVRAENADEEEVKTQELYKKFRGILNKLTPQKFDTLLDKVK 648
R V +N +EE L+ +FR I + QKF L D +K
Sbjct: 659 RIVGVDNVVDEEEYNSNLHSRFRSICGVIGRQKFSILQDDIK 700
>01_06_1210 +
35430143-35430796,35430912-35431004,35431397-35431546,
35431817-35432076,35433378-35433641,35434475-35434682
Length = 542
Score = 31.1 bits (67), Expect = 6.7
Identities = 16/48 (33%), Positives = 27/48 (56%), Gaps = 3/48 (6%)
Query: 365 PVSSFTNNIMGVHHNAPVQAVAPVMSILTPVTVPAHSQTIVTPTNTQG 412
P SF ++ + ++P+ A P LTPV+VPA++ + TP + G
Sbjct: 42 PFFSFPSSHLSSSSSSPIAATPPP---LTPVSVPANASSPETPVDASG 86
>12_02_0720 - 22510996-22512949,22513752-22514533
Length = 911
Score = 30.7 bits (66), Expect = 8.8
Identities = 16/69 (23%), Positives = 35/69 (50%)
Query: 1094 DRSAKEIEMIVNIVQLLVSTNTVSPDNLLEGMKETFDCAPDLFIDIPMLYNNLGKFVMPH 1153
D S+++ I++IV T ++LL+ ++ FDC + + + N + K ++P
Sbjct: 172 DYSSRQQSNIISIVGFGGLGKTTLANSLLQELEAKFDCHFFVSVSLKPDINKILKSILPQ 231
Query: 1154 IEKKHITFV 1162
++KK +
Sbjct: 232 LDKKRYAHI 240
>06_03_0493 + 21402536-21404599
Length = 687
Score = 30.7 bits (66), Expect = 8.8
Identities = 28/93 (30%), Positives = 43/93 (46%), Gaps = 6/93 (6%)
Query: 1314 HFNRDRMNKYASLIQDFGETKQIREAICLFG--IQQL--IHKLEHPQGLSLEIFQY-LHD 1368
HF K L+ + + K + I L+G IQ L +HKL+ + L ++ + L
Sbjct: 408 HFMNKNSEKALGLLSEM-KNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEP 466
Query: 1369 QYIISLDGFIAWWESDKEPEGKGVMMKALTSFF 1401
YII A ++S K PE ++ K L S F
Sbjct: 467 NYIIYTTMMDACFKSGKVPEAIAMLQKILDSGF 499
>03_03_0097 + 14386262-14386532,14387696-14387919,14388057-14388307,
14388393-14388771,14388958-14389389
Length = 518
Score = 30.7 bits (66), Expect = 8.8
Identities = 16/43 (37%), Positives = 25/43 (58%), Gaps = 2/43 (4%)
Query: 1248 NKKILSPSQTQDKLLQLMNTDESC-EC-IKGWVQDKFGKSSNE 1288
++++L+P+ T DKL + T SC EC I+GW+ S E
Sbjct: 151 HRRVLTPAFTMDKLKVMTKTMASCAECLIQGWLDHASNSKSIE 193
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.313 0.129 0.373
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 36,434,094
Number of Sequences: 37544
Number of extensions: 1440469
Number of successful extensions: 3272
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 20
Number of HSP's that attempted gapping in prelim test: 3243
Number of HSP's gapped (non-prelim): 42
length of query: 1417
length of database: 14,793,348
effective HSP length: 91
effective length of query: 1326
effective length of database: 11,376,844
effective search space: 15085695144
effective search space used: 15085695144
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 66 (30.7 bits)
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