Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000528-TA|BGIBMGA000528-PA|IPR003890|Initiation factor
eIF-4 gamma, middle, IPR003891|Initiation factor eIF-4 gamma, MA3,
IPR003307|eIF4-gamma/eIF5/eIF2-epsilon
(1417 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z49968-4|CAA90261.1| 1156|Caenorhabditis elegans Hypothetical pr... 131 3e-30
Z49968-5|CAE47470.1| 1155|Caenorhabditis elegans Hypothetical pr... 129 2e-29
U88165-2|AAO12421.1| 597|Caenorhabditis elegans Hypothetical pr... 35 0.36
U88165-1|AAO12420.1| 656|Caenorhabditis elegans Hypothetical pr... 35 0.36
U23516-9|AAG38884.1| 1203|Caenorhabditis elegans Hypothetical pr... 35 0.48
Z68752-9|CAA92985.1| 1208|Caenorhabditis elegans Hypothetical pr... 33 1.1
Z68316-8|CAA92685.1| 1208|Caenorhabditis elegans Hypothetical pr... 33 1.1
U39653-3|AAL56623.1| 1702|Caenorhabditis elegans Prion-like-(q/n... 33 1.1
AF098995-10|AAC67487.2| 411|Caenorhabditis elegans Hypothetical... 33 1.1
Z48055-1|CAA88133.1| 622|Caenorhabditis elegans Hypothetical pr... 32 2.6
AL034393-6|CAA22321.1| 507|Caenorhabditis elegans Hypothetical ... 32 2.6
Z82075-5|CAD54162.1| 1021|Caenorhabditis elegans Hypothetical pr... 32 3.4
Z67881-3|CAD44099.1| 1405|Caenorhabditis elegans Hypothetical pr... 32 3.4
Z50797-11|CAA90676.2| 1405|Caenorhabditis elegans Hypothetical p... 32 3.4
Z48055-9|CAI58650.1| 1013|Caenorhabditis elegans Hypothetical pr... 32 3.4
Z29443-14|CAI59118.1| 1013|Caenorhabditis elegans Hypothetical p... 32 3.4
U23515-13|AAK21453.1| 823|Caenorhabditis elegans Hypothetical p... 32 3.4
AL110495-1|CAB60408.1| 268|Caenorhabditis elegans Hypothetical ... 32 3.4
AL021489-5|CAD54166.1| 1021|Caenorhabditis elegans Hypothetical ... 32 3.4
AC006797-1|AAF60743.1| 1079|Caenorhabditis elegans Hypothetical ... 32 3.4
Z74030-16|CAI79165.1| 481|Caenorhabditis elegans Hypothetical p... 31 4.5
Z74030-15|CAI79164.1| 477|Caenorhabditis elegans Hypothetical p... 31 4.5
Z74030-7|CAA98447.2| 559|Caenorhabditis elegans Hypothetical pr... 31 4.5
Z74030-6|CAA98444.2| 508|Caenorhabditis elegans Hypothetical pr... 31 4.5
U64857-13|AAC25859.2| 436|Caenorhabditis elegans Hypothetical p... 31 4.5
U64857-12|AAN84849.1| 413|Caenorhabditis elegans Hypothetical p... 31 4.5
Z54236-5|CAA90980.1| 386|Caenorhabditis elegans Hypothetical pr... 31 5.9
U97407-7|AAB52480.2| 457|Caenorhabditis elegans Prion-like-(q/n... 31 5.9
Z78415-7|CAH60759.1| 844|Caenorhabditis elegans Hypothetical pr... 31 7.8
Z78415-5|CAB01670.1| 925|Caenorhabditis elegans Hypothetical pr... 31 7.8
AF063007-5|AAD47125.1| 712|Caenorhabditis elegans Prion-like-(q... 31 7.8
AF016425-12|AAB65336.1| 190|Caenorhabditis elegans Histone h1 l... 31 7.8
>Z49968-4|CAA90261.1| 1156|Caenorhabditis elegans Hypothetical
protein M110.4a protein.
Length = 1156
Score = 131 bits (317), Expect = 3e-30
Identities = 109/372 (29%), Positives = 175/372 (47%), Gaps = 42/372 (11%)
Query: 528 ISRPSSDNFFPFGKSSGLGSRSNTPRDIKREGRNMTP-SGRGSMKLPATASGSNPHKPVI 586
+S NF P + G G+R P GR T +GRG + P PV+
Sbjct: 425 VSDNKKPNFTPNWANKG-GNRQQVPY----RGRTTTDGTGRGGQQQRDRMHNKRP--PVV 477
Query: 587 HVCLN--DDVKLNESDSAWRPTRYVRAENADEEEVKTQELYKKFRGILNKLTPQKFDTLL 644
+ V L S AW+P R AE EE E+ KK R ++NK+TP L
Sbjct: 478 RPSIERVQRVTLPSSKDAWKPDRQKTAEAVASEEAAVIEVCKKVRSLMNKVTPTSQRPLT 537
Query: 645 DKVKALDI-NNQKRLEGVIDLVFEKAIEEPNFSKAYAAMCHKLSKLKVPADNPTRTDECV 703
++ + ++ +N +L V+++VF+KA+EEP F YA MC + ++ ++T
Sbjct: 538 EEFISYNVSSNDAQLAQVVEIVFDKAVEEPKFCALYAEMCKAQANHEL-----SQTGGKS 592
Query: 704 NFRALIINKCQNQFQTDK--SNEQVMKLEKEMTECSDPAKKKEIQAMIQEEHRRIRMRSV 761
FR ++ + Q FQ K +++ +EKE DP KK + M+ EE ++ R R
Sbjct: 593 AFRNKVLTRTQMTFQDKKDIDADKLAIIEKE----EDPVKK---ELMLAEEKQKFRRRKF 645
Query: 762 GNVRFIGELYKLKMLAVKIMEYCMNYLI------DIXXXXXXXXX----XXXXTTIGEQI 811
G + F+G LY+ ++L+ KI++ C L DI T+G +
Sbjct: 646 GVMTFMGYLYRNQLLSTKIVQTCTFELFNSIKDQDIKKEDVDEESIHCGLQLIETVGVML 705
Query: 812 ENEPQD---HLDPIFKKMQDIVDRRSNKISSRVRFMIQDVIELRKRKWVTKSVIDTQPKM 868
+ LD F+K++ SNKI RFMI +++ELRK KW+ + ++ PK
Sbjct: 706 DKSKDSTTVFLDQWFQKLEAAKPYCSNKI----RFMIMNLMELRKDKWIPRKSTESGPKK 761
Query: 869 MDQIQKEAEQQQ 880
+D+I K+ Q++
Sbjct: 762 IDEIHKDIRQEK 773
>Z49968-5|CAE47470.1| 1155|Caenorhabditis elegans Hypothetical
protein M110.4b protein.
Length = 1155
Score = 129 bits (311), Expect = 2e-29
Identities = 109/372 (29%), Positives = 175/372 (47%), Gaps = 43/372 (11%)
Query: 528 ISRPSSDNFFPFGKSSGLGSRSNTPRDIKREGRNMTP-SGRGSMKLPATASGSNPHKPVI 586
+S NF P + G G+R R GR T +GRG + P PV+
Sbjct: 425 VSDNKKPNFTPNWANKG-GNRQQPYR-----GRTTTDGTGRGGQQQRDRMHNKRP--PVV 476
Query: 587 HVCLN--DDVKLNESDSAWRPTRYVRAENADEEEVKTQELYKKFRGILNKLTPQKFDTLL 644
+ V L S AW+P R AE EE E+ KK R ++NK+TP L
Sbjct: 477 RPSIERVQRVTLPSSKDAWKPDRQKTAEAVASEEAAVIEVCKKVRSLMNKVTPTSQRPLT 536
Query: 645 DKVKALDI-NNQKRLEGVIDLVFEKAIEEPNFSKAYAAMCHKLSKLKVPADNPTRTDECV 703
++ + ++ +N +L V+++VF+KA+EEP F YA MC + ++ ++T
Sbjct: 537 EEFISYNVSSNDAQLAQVVEIVFDKAVEEPKFCALYAEMCKAQANHEL-----SQTGGKS 591
Query: 704 NFRALIINKCQNQFQTDK--SNEQVMKLEKEMTECSDPAKKKEIQAMIQEEHRRIRMRSV 761
FR ++ + Q FQ K +++ +EKE DP KK + M+ EE ++ R R
Sbjct: 592 AFRNKVLTRTQMTFQDKKDIDADKLAIIEKE----EDPVKK---ELMLAEEKQKFRRRKF 644
Query: 762 GNVRFIGELYKLKMLAVKIMEYCMNYLI------DIXXXXXXXXX----XXXXTTIGEQI 811
G + F+G LY+ ++L+ KI++ C L DI T+G +
Sbjct: 645 GVMTFMGYLYRNQLLSTKIVQTCTFELFNSIKDQDIKKEDVDEESIHCGLQLIETVGVML 704
Query: 812 ENEPQD---HLDPIFKKMQDIVDRRSNKISSRVRFMIQDVIELRKRKWVTKSVIDTQPKM 868
+ LD F+K++ SNKI RFMI +++ELRK KW+ + ++ PK
Sbjct: 705 DKSKDSTTVFLDQWFQKLEAAKPYCSNKI----RFMIMNLMELRKDKWIPRKSTESGPKK 760
Query: 869 MDQIQKEAEQQQ 880
+D+I K+ Q++
Sbjct: 761 IDEIHKDIRQEK 772
>U88165-2|AAO12421.1| 597|Caenorhabditis elegans Hypothetical
protein F54C1.5b protein.
Length = 597
Score = 35.1 bits (77), Expect = 0.36
Identities = 28/99 (28%), Positives = 44/99 (44%), Gaps = 3/99 (3%)
Query: 691 VPADNPTRTDECVNFRALIINKCQNQFQTDKSNEQVMKLEKEMTECSDPAKKKEIQAMIQ 750
V A+NP+ T C+N + + T+ E + KLEK EC D +K I+ I+
Sbjct: 270 VLAENPSHTFYCLNEYQFNLLEALIYMPTNPE-ESLKKLEKLEKECLDRLRKTAIEIQIK 328
Query: 751 EEHRRIRMRSVGNVRFIGELY--KLKMLAVKIMEYCMNY 787
+E + +R + E Y L+M +M Y Y
Sbjct: 329 KEQKTTDSDDSLEMRNLIESYDDSLEMYLPVLMTYAKYY 367
>U88165-1|AAO12420.1| 656|Caenorhabditis elegans Hypothetical
protein F54C1.5a protein.
Length = 656
Score = 35.1 bits (77), Expect = 0.36
Identities = 28/99 (28%), Positives = 44/99 (44%), Gaps = 3/99 (3%)
Query: 691 VPADNPTRTDECVNFRALIINKCQNQFQTDKSNEQVMKLEKEMTECSDPAKKKEIQAMIQ 750
V A+NP+ T C+N + + T+ E + KLEK EC D +K I+ I+
Sbjct: 329 VLAENPSHTFYCLNEYQFNLLEALIYMPTNPE-ESLKKLEKLEKECLDRLRKTAIEIQIK 387
Query: 751 EEHRRIRMRSVGNVRFIGELY--KLKMLAVKIMEYCMNY 787
+E + +R + E Y L+M +M Y Y
Sbjct: 388 KEQKTTDSDDSLEMRNLIESYDDSLEMYLPVLMTYAKYY 426
>U23516-9|AAG38884.1| 1203|Caenorhabditis elegans Hypothetical protein
B0416.1 protein.
Length = 1203
Score = 34.7 bits (76), Expect = 0.48
Identities = 25/86 (29%), Positives = 39/86 (45%), Gaps = 2/86 (2%)
Query: 182 ILTEICSNDNYVNDTNDRQTPQPEPTPNFAEEFNRRVYEVAKQPSDSVTKTNVTKNVELP 241
I+ E+ SND +D R P P P+ E +R+ Q S+S +K + +
Sbjct: 1105 IMNEVMSNDETTDDEKGRLIPDRPPIPHSPREL-KRLKREKDQQSESGSKPSTPRPPRFR 1163
Query: 242 ISSMSNVLSQSNAINYTNSGNNKSEI 267
I SMS + N ++S N K E+
Sbjct: 1164 I-SMSPPRKPPSEKNDSDSSNRKYEM 1188
>Z68752-9|CAA92985.1| 1208|Caenorhabditis elegans Hypothetical
protein K08E4.1 protein.
Length = 1208
Score = 33.5 bits (73), Expect = 1.1
Identities = 14/43 (32%), Positives = 19/43 (44%)
Query: 101 YPYVGYIPGYNTPPGHTPQYYYTPNSPQLPSQNAQSNPPSRNN 143
Y G PGY + P TP Y + +P P + P+ NN
Sbjct: 913 YDDSGRTPGYESMPSRTPNYDSSSKTPAYPESEHSARTPAYNN 955
>Z68316-8|CAA92685.1| 1208|Caenorhabditis elegans Hypothetical
protein K08E4.1 protein.
Length = 1208
Score = 33.5 bits (73), Expect = 1.1
Identities = 14/43 (32%), Positives = 19/43 (44%)
Query: 101 YPYVGYIPGYNTPPGHTPQYYYTPNSPQLPSQNAQSNPPSRNN 143
Y G PGY + P TP Y + +P P + P+ NN
Sbjct: 913 YDDSGRTPGYESMPSRTPNYDSSSKTPAYPESEHSARTPAYNN 955
>U39653-3|AAL56623.1| 1702|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 65,
isoform a protein.
Length = 1702
Score = 33.5 bits (73), Expect = 1.1
Identities = 20/80 (25%), Positives = 37/80 (46%), Gaps = 4/80 (5%)
Query: 805 TTIGEQIENEPQDHLDPIFKKMQDIVDRRSNKISSRVRFMIQDVIELRKRKWVTKSVIDT 864
TT+ +E P D F + D D+ + I++ V ++ E R +K TK T
Sbjct: 922 TTLQAPVEEAPSDQFPENFLEQPDSPDKVTEVINNVVASVLSSPDEFRGQKQFTK----T 977
Query: 865 QPKMMDQIQKEAEQQQRHIE 884
+ ++D K ++Q H++
Sbjct: 978 EKHLLDGTSKPTPKKQSHVD 997
>AF098995-10|AAC67487.2| 411|Caenorhabditis elegans Hypothetical
protein F58E1.10 protein.
Length = 411
Score = 33.5 bits (73), Expect = 1.1
Identities = 17/53 (32%), Positives = 30/53 (56%)
Query: 1197 VKSKWQESNLKLEQWMNEDQSLTRSYEQVSKWIEDNHFEFLEGDVKSSEEENK 1249
VK K+++ ++LE+ E S+T S ++ + HF ++ V+SS EE K
Sbjct: 359 VKRKFEKRIVRLEELNGETTSVTLSMNNSAELVVQKHFRTVKLKVQSSREEEK 411
>Z48055-1|CAA88133.1| 622|Caenorhabditis elegans Hypothetical
protein T07A5.1 protein.
Length = 622
Score = 32.3 bits (70), Expect = 2.6
Identities = 26/110 (23%), Positives = 48/110 (43%), Gaps = 6/110 (5%)
Query: 685 KLSKLKVPADNPTRTDECVNFRALIINKCQNQFQTDKSNEQVMKLE----KEMTECSDPA 740
K SK+ +R +N L + KC QF+ K + LE +++T A
Sbjct: 347 KKSKINTYGSRKSRALHSMNIAELELKKCILQFKIKKFERREKLLEEVENQDLTGGQHGA 406
Query: 741 KKKEIQAMIQEEHRRIRMRSVGNVRFIGEL-YKLKMLAVKIMEYCMNYLI 789
+K ++ + QE+ + S+GN+ + LKM + C+N ++
Sbjct: 407 RKIDVSLLFQEK-KNFNTFSIGNLHIPSNIPLFLKMWERSEIRGCLNLIV 455
>AL034393-6|CAA22321.1| 507|Caenorhabditis elegans Hypothetical
protein Y18D10A.8 protein.
Length = 507
Score = 32.3 bits (70), Expect = 2.6
Identities = 13/53 (24%), Positives = 27/53 (50%)
Query: 806 TIGEQIENEPQDHLDPIFKKMQDIVDRRSNKISSRVRFMIQDVIELRKRKWVT 858
T G +E ++ L+ +F ++ R + ++ + R I +++ELR W T
Sbjct: 63 TSGSMLEQSHKNELNKVFTSLRQACCRDNGQLGTPCRLKIMELVELRAMNWRT 115
>Z82075-5|CAD54162.1| 1021|Caenorhabditis elegans Hypothetical
protein W07A8.2b protein.
Length = 1021
Score = 31.9 bits (69), Expect = 3.4
Identities = 30/106 (28%), Positives = 49/106 (46%), Gaps = 12/106 (11%)
Query: 688 KLKVPADNPTRTDECVNFRALIINKCQNQFQTDKSNEQVMKLEKEMTECSDPAKKKEIQA 747
+ V A T T E +N R + + + D E++ K E+T+ DP KKKE +A
Sbjct: 147 EFSVVASLETLTKE-MNARVAEQSSPDHHKREDSREERLTK--NELTDNEDPKKKKEKEA 203
Query: 748 MIQEE-------HRRIRMRSVGNVRFIGELYKLKMLA--VKIMEYC 784
+EE H I + + N +++ L++ LA V + E C
Sbjct: 204 KEEEELKNKPLYHLAITLYNENNEKYVMSLFRSHKLADVVALCERC 249
>Z67881-3|CAD44099.1| 1405|Caenorhabditis elegans Hypothetical
protein T22H6.6a protein.
Length = 1405
Score = 31.9 bits (69), Expect = 3.4
Identities = 32/140 (22%), Positives = 67/140 (47%), Gaps = 15/140 (10%)
Query: 209 NFAEEFNRRVYEVAKQP--SDSVTKTNVTKNVELPISSMSNVLSQSNAINYTNSGNNKSE 266
N++ +R + + P D + V+ +V P SSMS + + TNS +N +
Sbjct: 251 NYSSLVSRANLRLLRPPWYEDLINPQRVSNSV--PTSSMSLPSTSEDGRQNTNSQDNVTL 308
Query: 267 IYSINESKILGPDVAVETSETPILSAISD-------SP---VIVPKMPMNV-KQLQKNSD 315
+ ++ + + + + TPI + IS SP VIVP +P+ Q++S
Sbjct: 309 LMALQQQQRRSQQLQHVINITPIPTPISTGQIVTHASPAGTVIVPVLPLQPGTSNQESSS 368
Query: 316 QSIVLDTNENIPLKQHKSKN 335
+++ +D++E +P ++ ++
Sbjct: 369 KTVSIDSDEELPESSNQDQS 388
>Z50797-11|CAA90676.2| 1405|Caenorhabditis elegans Hypothetical
protein T22H6.6a protein.
Length = 1405
Score = 31.9 bits (69), Expect = 3.4
Identities = 32/140 (22%), Positives = 67/140 (47%), Gaps = 15/140 (10%)
Query: 209 NFAEEFNRRVYEVAKQP--SDSVTKTNVTKNVELPISSMSNVLSQSNAINYTNSGNNKSE 266
N++ +R + + P D + V+ +V P SSMS + + TNS +N +
Sbjct: 251 NYSSLVSRANLRLLRPPWYEDLINPQRVSNSV--PTSSMSLPSTSEDGRQNTNSQDNVTL 308
Query: 267 IYSINESKILGPDVAVETSETPILSAISD-------SP---VIVPKMPMNV-KQLQKNSD 315
+ ++ + + + + TPI + IS SP VIVP +P+ Q++S
Sbjct: 309 LMALQQQQRRSQQLQHVINITPIPTPISTGQIVTHASPAGTVIVPVLPLQPGTSNQESSS 368
Query: 316 QSIVLDTNENIPLKQHKSKN 335
+++ +D++E +P ++ ++
Sbjct: 369 KTVSIDSDEELPESSNQDQS 388
>Z48055-9|CAI58650.1| 1013|Caenorhabditis elegans Hypothetical protein
T07C4.10 protein.
Length = 1013
Score = 31.9 bits (69), Expect = 3.4
Identities = 18/54 (33%), Positives = 33/54 (61%), Gaps = 2/54 (3%)
Query: 1207 KLEQWMNEDQSLTRSYEQVSKWIEDNHFEFLEGDVKSSEEENKKILSPSQTQDK 1260
+LEQ +E + R Y + +D +E ++ +VK +E+ENK++L +T+DK
Sbjct: 873 QLEQAQHELEKKKREYMWKLQQ-KDEFYEIMDRNVKETEKENKRLLR-KRTEDK 924
>Z29443-14|CAI59118.1| 1013|Caenorhabditis elegans Hypothetical
protein T07C4.10 protein.
Length = 1013
Score = 31.9 bits (69), Expect = 3.4
Identities = 18/54 (33%), Positives = 33/54 (61%), Gaps = 2/54 (3%)
Query: 1207 KLEQWMNEDQSLTRSYEQVSKWIEDNHFEFLEGDVKSSEEENKKILSPSQTQDK 1260
+LEQ +E + R Y + +D +E ++ +VK +E+ENK++L +T+DK
Sbjct: 873 QLEQAQHELEKKKREYMWKLQQ-KDEFYEIMDRNVKETEKENKRLLR-KRTEDK 924
>U23515-13|AAK21453.1| 823|Caenorhabditis elegans Hypothetical
protein R144.2a protein.
Length = 823
Score = 31.9 bits (69), Expect = 3.4
Identities = 18/52 (34%), Positives = 23/52 (44%), Gaps = 4/52 (7%)
Query: 375 GVHHNAPVQAVAPVMSILTPVTVPAHSQTIVTPTNTQGMCPSYLNTPQNQII 426
G HHN+P Q AP++ PV P Q + P N L+ P N I
Sbjct: 367 GYHHNSPPQDPAPIV----PVQAPPPQQHLPAPENVYSSEQPKLDVPANNRI 414
>AL110495-1|CAB60408.1| 268|Caenorhabditis elegans Hypothetical
protein Y60A9.1 protein.
Length = 268
Score = 31.9 bits (69), Expect = 3.4
Identities = 24/94 (25%), Positives = 45/94 (47%), Gaps = 10/94 (10%)
Query: 391 ILTPVTVPAHSQTIVTPTNTQGMCPSYLNTPQNQIIRETKERL----KSEEQERIEYDTT 446
+L PV VP + P ++ + P+ QIIR+ +E+ K+E+ ER ++ +
Sbjct: 154 VLEPVFVPIKPKKSAVPIKSKVV------KPKEQIIRQQREQRYRAQKTEQMERTQHANS 207
Query: 447 NLEKETSFTTIRSNGPASLVISSVDSLSNTTNPP 480
NL K S + ++ +L+ + + NPP
Sbjct: 208 NLRKVKSESNLKKLPNDTLMRKADAGKTKHFNPP 241
>AL021489-5|CAD54166.1| 1021|Caenorhabditis elegans Hypothetical
protein W07A8.2b protein.
Length = 1021
Score = 31.9 bits (69), Expect = 3.4
Identities = 30/106 (28%), Positives = 49/106 (46%), Gaps = 12/106 (11%)
Query: 688 KLKVPADNPTRTDECVNFRALIINKCQNQFQTDKSNEQVMKLEKEMTECSDPAKKKEIQA 747
+ V A T T E +N R + + + D E++ K E+T+ DP KKKE +A
Sbjct: 147 EFSVVASLETLTKE-MNARVAEQSSPDHHKREDSREERLTK--NELTDNEDPKKKKEKEA 203
Query: 748 MIQEE-------HRRIRMRSVGNVRFIGELYKLKMLA--VKIMEYC 784
+EE H I + + N +++ L++ LA V + E C
Sbjct: 204 KEEEELKNKPLYHLAITLYNENNEKYVMSLFRSHKLADVVALCERC 249
>AC006797-1|AAF60743.1| 1079|Caenorhabditis elegans Hypothetical
protein Y51B11A.1 protein.
Length = 1079
Score = 31.9 bits (69), Expect = 3.4
Identities = 34/137 (24%), Positives = 52/137 (37%), Gaps = 9/137 (6%)
Query: 360 TSLLQPVSSFTNNIMGVHHNAP-VQAVAPVMSILTPVTVPAHSQTIVTPTNTQGMCPSYL 418
T+ +P SS T+ + AP + P S TPV + TI P T PS
Sbjct: 704 TTSTEPPSSSTSPVQTTTTTAPETTSTEPPSSSTTPV----QTTTITAPETTSTEPPSSS 759
Query: 419 NTPQNQIIRETKERLKSEEQERIE---YDTTNLEKETSFTTIRSNGPASLVISSVDSLSN 475
TP E +E TT ET+ T S+ + + +++ +
Sbjct: 760 TTPVQTTTTTAPETTSTEPPSSSNTPVQTTTTTAPETTSTEPPSSSTSPVQTTTITAPET 819
Query: 476 T-TNPPTSQKIISEEST 491
T T PP+S + +T
Sbjct: 820 TSTEPPSSSNTPVQTTT 836
Score = 31.1 bits (67), Expect = 5.9
Identities = 57/295 (19%), Positives = 88/295 (29%), Gaps = 16/295 (5%)
Query: 195 DTNDRQTPQPEPTPNFAEEFNRRVYEVAKQPSDSVTKTNVTKNVELPISSMSNVLSQSNA 254
+T + P TP + PS S T T +S + S +
Sbjct: 473 ETTSTEPPSSSTTPVQTTTITAPETTSTEPPSSSTTPVQTTTTTAPETTSTESPSSSTTP 532
Query: 255 INYTNSGNNKSEIYSINESKILGPDVAVETSETPILSAISDSPVIVPKMPMNVKQLQKNS 314
+ T + E S V+T+ T S P P+
Sbjct: 533 VQTTTT--TAPETTSTEPPS--SSTTPVQTTTTTAPETTSTEPPSSSTTPVQTTTTTAPE 588
Query: 315 DQSIVLDTNENIPLKQHKSKNVPQIEDFDKXXXXXXXXXXXXXXX--TSLLQPVSSFTNN 372
S ++ P+ Q + P+ + T+ +P SS T
Sbjct: 589 TTSTEPPSSSTTPV-QTTTTTAPETTSTEPPSSSTTPVQTTTTTAPETTSTEPPSSSTTP 647
Query: 373 IMGVHHNAP-VQAVAPVMSILTPVTVPAHSQTIVTPTNTQGMCPSYLNTPQNQIIRETKE 431
+ AP + P S TPV + T P T PS NTP E
Sbjct: 648 VQTTTTTAPETTSTEPPSSSTTPV----QTTTTTAPETTSTEPPSSSNTPVQTTTTTAPE 703
Query: 432 RLKSEEQERIE---YDTTNLEKETSFTTIRSNGPASLVISSVDSLSNT-TNPPTS 482
+E TT ET+ T S+ + +++ + T T PP+S
Sbjct: 704 TTSTEPPSSSTSPVQTTTTTAPETTSTEPPSSSTTPVQTTTITAPETTSTEPPSS 758
>Z74030-16|CAI79165.1| 481|Caenorhabditis elegans Hypothetical
protein D1054.9e protein.
Length = 481
Score = 31.5 bits (68), Expect = 4.5
Identities = 25/69 (36%), Positives = 31/69 (44%), Gaps = 4/69 (5%)
Query: 390 SILTPVTVPAHSQTIVTP--TNTQGMCPSYLNTPQNQIIRETKERLKSEEQERIEYDTTN 447
S +T VP S TI T T+ S TP+ II ET+ER +E TT
Sbjct: 221 SSVTTTEVPVTSTTIPTEPSTSVSSSSTSASTTPELPIIEETEEREVTEAS--TSTTTTT 278
Query: 448 LEKETSFTT 456
E T+ TT
Sbjct: 279 AEPSTTATT 287
>Z74030-15|CAI79164.1| 477|Caenorhabditis elegans Hypothetical
protein D1054.9d protein.
Length = 477
Score = 31.5 bits (68), Expect = 4.5
Identities = 25/69 (36%), Positives = 31/69 (44%), Gaps = 4/69 (5%)
Query: 390 SILTPVTVPAHSQTIVTP--TNTQGMCPSYLNTPQNQIIRETKERLKSEEQERIEYDTTN 447
S +T VP S TI T T+ S TP+ II ET+ER +E TT
Sbjct: 221 SSVTTTEVPVTSTTIPTEPSTSVSSSSTSASTTPELPIIEETEEREVTEAS--TSTTTTT 278
Query: 448 LEKETSFTT 456
E T+ TT
Sbjct: 279 AEPSTTATT 287
>Z74030-7|CAA98447.2| 559|Caenorhabditis elegans Hypothetical
protein D1054.9b protein.
Length = 559
Score = 31.5 bits (68), Expect = 4.5
Identities = 25/69 (36%), Positives = 31/69 (44%), Gaps = 4/69 (5%)
Query: 390 SILTPVTVPAHSQTIVTP--TNTQGMCPSYLNTPQNQIIRETKERLKSEEQERIEYDTTN 447
S +T VP S TI T T+ S TP+ II ET+ER +E TT
Sbjct: 221 SSVTTTEVPVTSTTIPTEPSTSVSSSSTSASTTPELPIIEETEEREVTEAS--TSTTTTT 278
Query: 448 LEKETSFTT 456
E T+ TT
Sbjct: 279 AEPSTTATT 287
>Z74030-6|CAA98444.2| 508|Caenorhabditis elegans Hypothetical
protein D1054.9a protein.
Length = 508
Score = 31.5 bits (68), Expect = 4.5
Identities = 25/69 (36%), Positives = 31/69 (44%), Gaps = 4/69 (5%)
Query: 390 SILTPVTVPAHSQTIVTP--TNTQGMCPSYLNTPQNQIIRETKERLKSEEQERIEYDTTN 447
S +T VP S TI T T+ S TP+ II ET+ER +E TT
Sbjct: 221 SSVTTTEVPVTSTTIPTEPSTSVSSSSTSASTTPELPIIEETEEREVTEAS--TSTTTTT 278
Query: 448 LEKETSFTT 456
E T+ TT
Sbjct: 279 AEPSTTATT 287
>U64857-13|AAC25859.2| 436|Caenorhabditis elegans Hypothetical
protein C37C3.2a protein.
Length = 436
Score = 31.5 bits (68), Expect = 4.5
Identities = 18/65 (27%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Query: 1319 RMNKYASLIQDFGETKQIREAICLFGIQQLIHKLE-HPQGLSLEIFQYLHDQYIISLDGF 1377
+++K+ +L+ F + + L G++Q+IHK E S I + L+D+ + D
Sbjct: 279 QISKHRNLLLRFTLNDKKAQRYLLGGVEQVIHKHEAELLSKSAHIIKSLYDEDVCEEDSL 338
Query: 1378 IAWWE 1382
I+W E
Sbjct: 339 ISWGE 343
>U64857-12|AAN84849.1| 413|Caenorhabditis elegans Hypothetical
protein C37C3.2c protein.
Length = 413
Score = 31.5 bits (68), Expect = 4.5
Identities = 18/65 (27%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Query: 1319 RMNKYASLIQDFGETKQIREAICLFGIQQLIHKLE-HPQGLSLEIFQYLHDQYIISLDGF 1377
+++K+ +L+ F + + L G++Q+IHK E S I + L+D+ + D
Sbjct: 279 QISKHRNLLLRFTLNDKKAQRYLLGGVEQVIHKHEAELLSKSAHIIKSLYDEDVCEEDSL 338
Query: 1378 IAWWE 1382
I+W E
Sbjct: 339 ISWGE 343
>Z54236-5|CAA90980.1| 386|Caenorhabditis elegans Hypothetical
protein C27B7.5 protein.
Length = 386
Score = 31.1 bits (67), Expect = 5.9
Identities = 17/40 (42%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Query: 522 PLPFANI-SRPSSDNFFPFGKSSGLGSRSNTPRDIKREGR 560
PLP NI P +F +S G+GS S PR +R GR
Sbjct: 122 PLPSENIMGSPRRGSFRSSPRSDGMGSSSKRPRSGRRTGR 161
>U97407-7|AAB52480.2| 457|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 19,
isoform a protein.
Length = 457
Score = 31.1 bits (67), Expect = 5.9
Identities = 15/39 (38%), Positives = 17/39 (43%)
Query: 106 YIPGYNTPPGHTPQYYYTPNSPQLPSQNAQSNPPSRNNP 144
Y P + PG PQY PNS P Q Q P + P
Sbjct: 416 YPPQHYPAPGAQPQYACPPNSVPQPQQQQQQWPAPSSQP 454
>Z78415-7|CAH60759.1| 844|Caenorhabditis elegans Hypothetical
protein C17G1.4b protein.
Length = 844
Score = 30.7 bits (66), Expect = 7.8
Identities = 15/39 (38%), Positives = 19/39 (48%), Gaps = 1/39 (2%)
Query: 102 PYVGYIPGYNTPPGHTPQYYYTPNSPQLPSQNAQSNPPS 140
PY Y PG PPG P + + + PSQNA P+
Sbjct: 140 PYRMY-PGMQGPPGQVPNSQNSSSQQRPPSQNANQQRPA 177
>Z78415-5|CAB01670.1| 925|Caenorhabditis elegans Hypothetical
protein C17G1.4a protein.
Length = 925
Score = 30.7 bits (66), Expect = 7.8
Identities = 15/39 (38%), Positives = 19/39 (48%), Gaps = 1/39 (2%)
Query: 102 PYVGYIPGYNTPPGHTPQYYYTPNSPQLPSQNAQSNPPS 140
PY Y PG PPG P + + + PSQNA P+
Sbjct: 140 PYRMY-PGMQGPPGQVPNSQNSSSQQRPPSQNANQQRPA 177
>AF063007-5|AAD47125.1| 712|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 59
protein.
Length = 712
Score = 30.7 bits (66), Expect = 7.8
Identities = 15/48 (31%), Positives = 22/48 (45%), Gaps = 1/48 (2%)
Query: 98 PRYYPYVGYIPGYNTPPGHTPQYYYTPNSPQLPSQNAQSNPPSRNNPT 145
P + G +P + H PQ +PQ P Q Q PP+++ PT
Sbjct: 464 PNKFNNSGPLPTQQSAQQHQPQQQQQ-QAPQQPVQQQQQTPPAQSQPT 510
>AF016425-12|AAB65336.1| 190|Caenorhabditis elegans Histone h1 like
protein 6 protein.
Length = 190
Score = 30.7 bits (66), Expect = 7.8
Identities = 22/77 (28%), Positives = 31/77 (40%), Gaps = 1/77 (1%)
Query: 384 AVAPVMSILTPVTVPAHSQTIVTPTNTQGMCPSYLNTPQNQIIRETKERLKSEEQERIEY 443
AVA ++ TP P + T V T P ++N I KER S + ++Y
Sbjct: 5 AVAETPAVKTPTKAPKANATKVPKVKTAAAHPPFINM-VTAAISSLKERKGSSKIAILKY 63
Query: 444 DTTNLEKETSFTTIRSN 460
T N + I SN
Sbjct: 64 ITANYKLGDQVKKINSN 80
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.313 0.129 0.373
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,168,741
Number of Sequences: 27539
Number of extensions: 1410861
Number of successful extensions: 4149
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 25
Number of HSP's that attempted gapping in prelim test: 4104
Number of HSP's gapped (non-prelim): 63
length of query: 1417
length of database: 12,573,161
effective HSP length: 91
effective length of query: 1326
effective length of database: 10,067,112
effective search space: 13348990512
effective search space used: 13348990512
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 66 (30.7 bits)
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