GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000527-TA|BGIBMGA000527-PA|IPR005828|General substrate
transporter
         (285 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ219483-1|ABB29887.1|  961|Anopheles gambiae cryptochrome 2 pro...    25   3.3  
AY341219-1|AAR13783.1|  200|Anopheles gambiae SRPN10 protein.          24   4.3  
AY341218-1|AAR13782.1|  200|Anopheles gambiae SRPN10 protein.          24   4.3  
AY341215-1|AAR13779.1|  200|Anopheles gambiae SRPN10 protein.          24   4.3  

>DQ219483-1|ABB29887.1|  961|Anopheles gambiae cryptochrome 2
           protein.
          Length = 961

 Score = 24.6 bits (51), Expect = 3.3
 Identities = 11/36 (30%), Positives = 22/36 (61%)

Query: 246 IRKLTNQVYRSKRRPQNEVSKMQEMKGATNPTFEND 281
           +RKL ++++  + +P + + K+ +  G T  TFE D
Sbjct: 67  LRKLNSRLFVIRGQPADALPKLFKEWGTTCLTFEED 102


>AY341219-1|AAR13783.1|  200|Anopheles gambiae SRPN10 protein.
          Length = 200

 Score = 24.2 bits (50), Expect = 4.3
 Identities = 10/23 (43%), Positives = 16/23 (69%)

Query: 235 KLNEIENHFTGIRKLTNQVYRSK 257
           K+  IE+HF+   ++TN + RSK
Sbjct: 21  KVQSIEDHFSTQPEITNHLDRSK 43


>AY341218-1|AAR13782.1|  200|Anopheles gambiae SRPN10 protein.
          Length = 200

 Score = 24.2 bits (50), Expect = 4.3
 Identities = 10/23 (43%), Positives = 16/23 (69%)

Query: 235 KLNEIENHFTGIRKLTNQVYRSK 257
           K+  IE+HF+   ++TN + RSK
Sbjct: 21  KVQSIEDHFSTQPEITNHLDRSK 43


>AY341215-1|AAR13779.1|  200|Anopheles gambiae SRPN10 protein.
          Length = 200

 Score = 24.2 bits (50), Expect = 4.3
 Identities = 10/23 (43%), Positives = 16/23 (69%)

Query: 235 KLNEIENHFTGIRKLTNQVYRSK 257
           K+  IE+HF+   ++TN + RSK
Sbjct: 21  KVQSIEDHFSTQPEITNHLDRSK 43


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.324    0.137    0.416 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 251,520
Number of Sequences: 2123
Number of extensions: 8564
Number of successful extensions: 21
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 17
Number of HSP's gapped (non-prelim): 4
length of query: 285
length of database: 516,269
effective HSP length: 63
effective length of query: 222
effective length of database: 382,520
effective search space: 84919440
effective search space used: 84919440
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.6 bits)
S2: 47 (23.0 bits)